Pregenerated sensors for LINC01844 (Homo sapiens)
Ensembl gene IDs: ENSG00000236714Ensembl transcript IDs: ENST00000432677.2, ENST00000652722.1, ENST00000652991.1, ENST00000654613.1, ENST00000654654.1, ENST00000655828.1, ENST00000658361.1, ENST00000658433.1, ENST00000658459.1, ENST00000659517.1, ENST00000659596.1, ENST00000659959.1, ENST00000660053.1, ENST00000660321.1, ENST00000662893.1, ENST00000664609.1, ENST00000665462.1, ENST00000666274.1, ENST00000666438.1, ENST00000666541.1, ENST00000667174.1, ENST00000667247.1, ENST00000668371.1, ENST00000669649.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACGAGACATGCCCACACCTTCAAGGAACTCACAAGGGAGTCTGAGTaGCAGCCAGAGGACGGAGCCACACACGGAGTCCTCCCATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TRHAHTFKELTRESE*QPEDGATHGVLPSW Trigger: CCAAGATGGGAGGACTCCGTGTGTGGCTCCGTCCTCTGGCTGTCACTCAGACTCCCTTGTGAGTTCCTTGAAGGTGTGGGCATGTCTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654613.1 |
||
| CDS TCA 90 bp | ATGAACGAGACATGCCCACACCTTCAAGGAACTCACAAGGGAGTCTaGGTGACAGCCAGAGGACGGAGCCACACACGGAGTCCTCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: MNETCPHLQGTHKGV*VTARGRSHTRSPPI Trigger: GATGGGAGGACTCCGTGTGTGGCTCCGTCCTCTGGCTGTCACTCAGACTCCCTTGTGAGTTCCTTGAAGGTGTGGGCATGTCTCGTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654613.1 |
||
| CDS TCA 90 bp | CCTTCAAGGAACTCACAAGGGAGTCTGAGTGACAGCCAGAGGACCTaGACTTCACAGTGCAATGAGAGAAGGATGCCCAGTGTGCTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSRNSQGSLSDSQRT*TSQCNERRMPSVLS Trigger: ACTAAGCACACTGGGCATCCTTCTCTCATTGCACTGTGAAGTTCAGGTCCTCTGGCTGTCACTCAGACTCCCTTGTGAGTTCCTTGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666274.1 |
||
| CDS TCA 90 bp | CCTTCAAGGAACTCACAAGGGAGTCTGAGTGACAGCCAGAGGACCTaGACTTCACAGTGCAATGAGAGAAGGATGCCCAGTGTGCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PSRNSQGSLSDSQRT*TSQCNERRMPSVLL Trigger: TAGAAGCACACTGGGCATCCTTCTCTCATTGCACTGTGAAGTTCAGGTCCTCTGGCTGTCACTCAGACTCCCTTGTGAGTTCCTTGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668371.1 |
||
| CDS GCA 90 bp | GTGACAGCCAGAGGACCTGAACTTCACAGTGCAATGAGAGAAGGATaGCCAGTGTGCTTCTATATCAGGCCCACTCTCCACTACTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VTARGPELHSAMREG*PVCFYIRPTLHYFV Trigger: CACAAAGTAGTGGAGAGTGGGCCTGATATAGAAGCACACTGGGCATCCTTCTCTCATTGCACTGTGAAGTTCAGGTCCTCTGGCTGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668371.1 |
||
| CDS CCA 90 bp | GAGGAGACACAGACTCACGGAGCCACACACGGAGTCCTCCCATCTTaGTCTACAAGTAATTTCCAGAAGTTAGTGGTTTGGTGGGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: EETQTHGATHGVLPS*STSNFQKLVVWWDR Trigger: TCTATCCCACCAAACCACTAACTTCTGGAAATTACTTGTAGACCAAGATGGGAGGACTCCGTGTGTGGCTCCGTGAGTCTGTGTCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654654.1 ENST00000658361.1 |
||
| CDS CCA 90 bp | CCAAGAGGAGACACAGACGGAGCCACACACGGAGTCCTCCCATCTTaGTCTACAAGTAATTTCCAGAAGTTAGTGGTTTGGTGGGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRGDTDGATHGVLPS*STSNFQKLVVWWDR Trigger: TCTATCCCACCAAACCACTAACTTCTGGAAATTACTTGTAGACCAAGATGGGAGGACTCCGTGTGTGGCTCCGTCTGTGTCTCCTCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659959.1 ENST00000666541.1 |
||
| CDS CCA 90 bp | ACATTTATTGAAATCTTACTATGCTTCGGGTGCTGGACTAGGCACTaGGGAGCCAAGGATGAACGAGACATGCCCACACCTTCAAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TFIEILLCFGCWTRH*GAKDERDMPTPSRN Trigger: GTTCCTTGAAGGTGTGGGCATGTCTCGTTCATCCTTGGCTCCCCAGTGCCTAGTCCAGCACCCGAAGCATAGTAAGATTTCAATAAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654613.1 ENST00000666274.1 ENST00000668371.1 |
||
| CDS CCA 90 bp | TCACATGAAGAGAGTCACGGAGCCACACACGGAGTCCTCCCATCTTaGTCTACAAGTAATTTCCAGAAGTTAGTGGTTTGGTGGGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: SHEESHGATHGVLPS*STSNFQKLVVWWDR Trigger: TCTATCCCACCAAACCACTAACTTCTGGAAATTACTTGTAGACCAAGATGGGAGGACTCCGTGTGTGGCTCCGTGACTCTCTTCATGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000432677.2 ENST00000652991.1 ENST00000664609.1 |
||
| CDS CCA 90 bp | TTGAGGGTTTCTAGGAACTGGGAACACAGGCTCAATTCAGGATTCTaGATAATTGCAACTGGTCTTTTGCTTTCTGCCTCTGCCACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRVSRNWEHRLNSGF*IIATGLLLSASATP Trigger: GGGAGTGGCAGAGGCAGAAAGCAAAAGACCAGTTGCAATTATCCAGAATCCTGAATTGAGCCTGTGTTCCCAGTTCCTAGAAACCCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000652991.1 ENST00000654613.1 ENST00000654654.1 ENST00000655828.1 ENST00000658433.1 ENST00000659596.1 ENST00000660321.1 ENST00000665462.1 ENST00000666541.1 ENST00000667247.1 ENST00000668371.1 |
||
| CDS CCA 90 bp | GAAGACACTGAGCATCAAGAATGTAGCCTCTTCGATTTCACCTCCTaGCAGAAGTGTGATGAGATCAGATACCACCATGGTTTTGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EDTEHQECSLFDFTS*QKCDEIRYHHGFAS Trigger: GGACGCAAAACCATGGTGGTATCTGATCTCATCACACTTCTGCCAGGAGGTGAAATCGAAGAGGCTACATTCTTGATGCTCAGTGTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655828.1 ENST00000659517.1 ENST00000660053.1 |
||
| CDS CCA 90 bp | TTAGCCTGTCTTCATCAGGGAGCCACACACGGAGTCCTCCCATCTTaGTCTACAAGTAATTTCCAGAAGTTAGTGGTTTGGTGGGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: LACLHQGATHGVLPS*STSNFQKLVVWWDR Trigger: TCTATCCCACCAAACCACTAACTTCTGGAAATTACTTGTAGACCAAGATGGGAGGACTCCGTGTGTGGCTCCCTGATGAAGACAGGCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660321.1 |
||
| CDS CCA 90 bp | CCTAGAAGAAGAATAGCACTCTCCCATCTTCTCCATCCTCCAGGTTaGTTAAGAGACTTAGCATTAGCCTGTCTTCATCAGGGAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PRRRIALSHLLHPPG*LRDLALACLHQGAT Trigger: TGTGGCTCCCTGATGAAGACAGGCTAATGCTAAGTCTCTTAACCAACCTGGAGGATGGAGAAGATGGGAGAGTGCTATTCTTCTTCTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660321.1 |
||
| CDS GCA 90 bp | GGATTCTGGATTATTGCAACAGCCTCCATCTTTTACCTGGATAATTaGAACTGGTCTTTTGCTTTCTGCCTCTGCCACTCCCTGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GFWIIATASIFYLDN*NWSFAFCLCHSLWS Trigger: TGACCACAGGGAGTGGCAGAGGCAGAAAGCAAAAGACCAGTTGCAATTATCCAGGTAAAAGATGGAGGCTGTTGCAATAATCCAGAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000432677.2 ENST00000652722.1 ENST00000658361.1 ENST00000658459.1 ENST00000659517.1 ENST00000659959.1 ENST00000660053.1 ENST00000666274.1 ENST00000666438.1 ENST00000667174.1 ENST00000669649.1 |
||
| CDS CCA 90 bp | TGGATTATTGCAACAGCCTCCATCTTTTACCTGGATAATTGCAACTaGTCTTTTGCTTTCTGCCTCTGCCACTCCCTGTGGTCAATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WIIATASIFYLDNCN*SFAFCLCHSLWSIP Trigger: TGGGATTGACCACAGGGAGTGGCAGAGGCAGAAAGCAAAAGACCAGTTGCAATTATCCAGGTAAAAGATGGAGGCTGTTGCAATAATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000432677.2 ENST00000652722.1 ENST00000658361.1 ENST00000658459.1 ENST00000659517.1 ENST00000659959.1 ENST00000660053.1 ENST00000666274.1 ENST00000666438.1 ENST00000667174.1 ENST00000669649.1 |
||
| CDS CCA 90 bp | TCTGAAGTCAACCTTCAAGGAGCCACACACGGAGTCCTCCCATCTTaGTCTACAAGTAATTTCCAGAAGTTAGTGGTTTGGTGGGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: SEVNLQGATHGVLPS*STSNFQKLVVWWDR Trigger: TCTATCCCACCAAACCACTAACTTCTGGAAATTACTTGTAGACCAAGATGGGAGGACTCCGTGTGTGGCTCCTTGAAGGTTGACTTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667247.1 ENST00000669649.1 |
||
| CDS CCA 90 bp | ACGATAAGTCATTCATATGGAGCCACACACGGAGTCCTCCCATCTTaGTCTACAAGTAATTTCCAGAAGTTAGTGGTTTGGTGGGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: TISHSYGATHGVLPS*STSNFQKLVVWWDR Trigger: TCTATCCCACCAAACCACTAACTTCTGGAAATTACTTGTAGACCAAGATGGGAGGACTCCGTGTGTGGCTCCATATGAATGACTTATCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000658433.1 ENST00000658459.1 ENST00000662893.1 ENST00000666274.1 ENST00000667174.1 |
||
| CDS CCA 90 bp | TTGAGGGTTTCTAGGAACTGGGAACACAGGCTCAATTCAGGATTCTaGATTATTGCAACAGCCTCCATCTTTTACCTGGATAATTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LRVSRNWEHRLNSGF*IIATASIFYLDNCN Trigger: GTTGCAATTATCCAGGTAAAAGATGGAGGCTGTTGCAATAATCCAGAATCCTGAATTGAGCCTGTGTTCCCAGTTCCTAGAAACCCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000432677.2 ENST00000652722.1 ENST00000658361.1 ENST00000658459.1 ENST00000659517.1 ENST00000659959.1 ENST00000660053.1 ENST00000666274.1 ENST00000666438.1 ENST00000667174.1 ENST00000669649.1 |
||
| CDS GCA 90 bp | AGTGGTCTAGAGCAATCTAGCTTCCAAACACGATTTCACAACCACTaGAGTGATATCCTCCCTTCTCAAATAAGATTGTTTCTCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGLEQSSFQTRFHNH*SDILPSQIRLFLLS Trigger: GGAAAGGAGAAACAATCTTATTTGAGAAGGGAGGATATCACTGCAGTGGTTGTGAAATCGTGTTTGGAAGCTAGATTGCTCTAGACCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000652722.1 ENST00000658433.1 ENST00000658459.1 ENST00000659596.1 ENST00000660321.1 ENST00000662893.1 ENST00000665462.1 ENST00000666274.1 ENST00000667174.1 |
||
| CDS TCA 90 bp | TTCATTGTAGGATGGAATTTGATCGCGTTAAAGCCAATTTGTCACTaGAATACCCCAAAGTTCATTCATTATGGAGGAATCCTAGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: FIVGWNLIALKPICH*NTPKFIHYGGILDP Trigger: AGGGTCTAGGATTCCTCCATAATGAATGAACTTTGGGGTATTTCAGTGACAAATTGGCTTTAACGCGATCAAATTCCATCCTACAATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000432677.2 ENST00000652722.1 ENST00000652991.1 ENST00000655828.1 ENST00000658361.1 ENST00000658433.1 ENST00000659517.1 ENST00000659959.1 ENST00000665462.1 ENST00000666438.1 ENST00000667174.1 ENST00000668371.1 ENST00000669649.1 |
||
| CDS TCA 90 bp | GTGATATTTCTGCTGGCTTCACTTGCACATTTCATTCAAAACAGTTaGAAAGTCCAGTGTGTTCATGGTGTTTTAACTGGCAGTTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VIFLLASLAHFIQNS*KVQCVHGVLTGSCD Trigger: ATCACAACTGCCAGTTAAAACACCATGAACACACTGGACTTTTCAACTGTTTTGAATGAAATGTGCAAGTGAAGCCAGCAGAAATATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000667247.1 ENST00000669649.1 |
||
| CDS CCA 90 bp | GTTAAAGCCAATTTGTCACTGAAATACCCCAAAGTTCATTCATTATaGAGGAATCCTAGACCCTGTAAACTTTTATTTCGGTTTCTTATC | + |
|
Preference number: 5 (lower is better) Translates to: VKANLSLKYPKVHSL*RNPRPCKLLFRFLI Trigger: GATAAGAAACCGAAATAAAAGTTTACAGGGTCTAGGATTCCTCCATAATGAATGAACTTTGGGGTATTTCAGTGACAAATTGGCTTTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000432677.2 ENST00000652722.1 ENST00000652991.1 ENST00000655828.1 ENST00000658361.1 ENST00000658433.1 ENST00000659517.1 ENST00000659959.1 ENST00000665462.1 ENST00000666438.1 ENST00000667174.1 ENST00000668371.1 ENST00000669649.1 |
||
| CDS TCA 72 bp | GCCCACACCTTCAAGGAACTCACAAGGGAGTCTGAGTaGCAGCCAGAGGACGGAGCCACACACGGAGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AHTFKELTRESE*QPEDGATHGVL Trigger: GAGGACTCCGTGTGTGGCTCCGTCCTCTGGCTGTCACTCAGACTCCCTTGTGAGTTCCTTGAAGGTGTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654613.1 |
||
| CDS TCA 72 bp | TGCCACTCCCTGTGGTCAATCCCAGGCGACTGGCTGTaGTCCTCCAAGTTTCCGCTGGCAACCTTCCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: CHSLWSIPGDWL*SSKFPLATFHL Trigger: GAGATGGAAGGTTGCCAGCGGAAACTTGGAGGATCACAGCCAGTCGCCTGGGATTGACCACAGGGAGTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000432677.2 ENST00000652722.1 ENST00000652991.1 ENST00000654613.1 ENST00000654654.1 ENST00000655828.1 ENST00000658361.1 ENST00000658433.1 ENST00000658459.1 ENST00000659517.1 ENST00000659596.1 ENST00000659959.1 ENST00000660053.1 ENST00000660321.1 ENST00000665462.1 ENST00000666274.1 ENST00000666438.1 ENST00000666541.1 ENST00000667174.1 ENST00000667247.1 ENST00000668371.1 ENST00000669649.1 |
||
| CDS TCA 72 bp | ACATGCCCACACCTTCAAGGAACTCACAAGGGAGTCTaGGTGACAGCCAGAGGACGGAGCCACACACGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TCPHLQGTHKGV*VTARGRSHTRS Trigger: ACTCCGTGTGTGGCTCCGTCCTCTGGCTGTCACTCAGACTCCCTTGTGAGTTCCTTGAAGGTGTGGGCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654613.1 |
||
| CDS GCA 72 bp | CTGGATAATTGCAACTGGTCTTTTGCTTTCTGCCTCTaGCACTCCCTGTGGTCAATCCCAGGCGACTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LDNCNWSFAFCL*HSLWSIPGDWL Trigger: CAGCCAGTCGCCTGGGATTGACCACAGGGAGTGGCAGAGGCAGAAAGCAAAAGACCAGTTGCAATTATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 22 transcripts: ENST00000432677.2 ENST00000652722.1 ENST00000652991.1 ENST00000654613.1 ENST00000654654.1 ENST00000655828.1 ENST00000658361.1 ENST00000658433.1 ENST00000658459.1 ENST00000659517.1 ENST00000659596.1 ENST00000659959.1 ENST00000660053.1 ENST00000660321.1 ENST00000665462.1 ENST00000666274.1 ENST00000666438.1 ENST00000666541.1 ENST00000667174.1 ENST00000667247.1 ENST00000668371.1 ENST00000669649.1 |
||
| CDS TCA 72 bp | ACATGCCCACACCTTCAAGGAACTCACAAGGGAGTCTaGGTGACAGCCAGAGGACCTGAACTTCACAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TCPHLQGTHKGV*VTARGPELHSA Trigger: TGCACTGTGAAGTTCAGGTCCTCTGGCTGTCACTCAGACTCCCTTGTGAGTTCCTTGAAGGTGTGGGCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666274.1 ENST00000668371.1 |
||
| CDS TCA 72 bp | AACTCACAAGGGAGTCTGAGTGACAGCCAGAGGACCTaGACTTCACAGTGCAATGAGAGAAGGATGCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: NSQGSLSDSQRT*TSQCNERRMPS Trigger: ACTGGGCATCCTTCTCTCATTGCACTGTGAAGTTCAGGTCCTCTGGCTGTCACTCAGACTCCCTTGTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666274.1 ENST00000668371.1 |
||
| CDS GCA 72 bp | AGGATTCTGGATAATTGCAACTGGTCTTTTGCTTTCTaGCTCTGCCACTCCCTGTGGTCAATCCCAGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: RILDNCNWSFAF*LCHSLWSIPGD Trigger: GTCGCCTGGGATTGACCACAGGGAGTGGCAGAGGCAGAAAGCAAAAGACCAGTTGCAATTATCCAGAATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000652991.1 ENST00000654613.1 ENST00000654654.1 ENST00000655828.1 ENST00000658433.1 ENST00000659596.1 ENST00000660321.1 ENST00000665462.1 ENST00000666541.1 ENST00000667247.1 ENST00000668371.1 |
||
| CDS GCA 72 bp | TTTTACCTGGATAATTGCAACTGGTCTTTTGCTTTCTaGCTCTGCCACTCCCTGTGGTCAATCCCAGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: FYLDNCNWSFAF*LCHSLWSIPGD Trigger: GTCGCCTGGGATTGACCACAGGGAGTGGCAGAGGCAGAAAGCAAAAGACCAGTTGCAATTATCCAGGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000432677.2 ENST00000652722.1 ENST00000658361.1 ENST00000658459.1 ENST00000659517.1 ENST00000659959.1 ENST00000660053.1 ENST00000666274.1 ENST00000666438.1 ENST00000667174.1 ENST00000669649.1 |
||
| CDS GCA 72 bp | CTGGGAACACAGGCTCAATTCAGGATTCTGGATAATTaGAACTGGTCTTTTGCTTTCTGCCTCTGCCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: LGTQAQFRILDN*NWSFAFCLCHS Trigger: GGAGTGGCAGAGGCAGAAAGCAAAAGACCAGTTGCAATTATCCAGAATCCTGAATTGAGCCTGTGTTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000652991.1 ENST00000654613.1 ENST00000654654.1 ENST00000655828.1 ENST00000658433.1 ENST00000659596.1 ENST00000660321.1 ENST00000665462.1 ENST00000666541.1 ENST00000667247.1 ENST00000668371.1 |
||
| CDS GCA 72 bp | GAGCAGACATTTATTGAAATCTTACTATGCTTCGGGTaGTGGACTAGGCACTGGGGAGCCAAGGATGAACGA | + |
|
Preference number: 6 (lower is better) Translates to: EQTFIEILLCFG*WTRHWGAKDER Trigger: TCGTTCATCCTTGGCTCCCCAGTGCCTAGTCCAGCACCCGAAGCATAGTAAGATTTCAATAAATGTCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654613.1 ENST00000666274.1 ENST00000668371.1 |
||
| CDS GCA 72 bp | GAACTTCACAGTGCAATGAGAGAAGGATGCCCAGTGTaGTTCTATATCAGGCCCACTCTCCACTACTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ELHSAMREGCPV*FYIRPTLHYFV Trigger: CACAAAGTAGTGGAGAGTGGGCCTGATATAGAAGCACACTGGGCATCCTTCTCTCATTGCACTGTGAAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668371.1 |
||
| CDS TCA 72 bp | AGTCCAGTGTGTTCATGGTGTTTTAACTGGCAGTTGTaGTCTGAAGTCAACCTTCAAGGAGCCACACACGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPVCSWCFNWQL*SEVNLQGATHG Trigger: TCCGTGTGTGGCTCCTTGAAGGTTGACTTCAGATCACAACTGCCAGTTAAAACACCATGAACACACTGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667247.1 ENST00000669649.1 |
||
| CDS CAA 72 bp | ATCCAGAAATTTCAAATGCGTAGGTACCAACTCCTCTaGGCACTGAGTGCCCGTGACCTCAGGAAAGTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: IQKFQMRRYQLL*ALSARDLRKVN Trigger: ATTGACTTTCCTGAGGTCACGGGCACTCAGTGCCAAGAGGAGTTGGTACCTACGCATTTGAAATTTCTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000432677.2 ENST00000655828.1 ENST00000658361.1 ENST00000658433.1 ENST00000665462.1 ENST00000666438.1 ENST00000667174.1 |
||
| CDS CAA 72 bp | CTCAATTCAGGATTCTGGATAATTGCAACTGGTCTTTaGCTTTCTGCCTCTGCCACTCCCTGTGGTCAATCC | + |
|
Preference number: 6 (lower is better) Translates to: LNSGFWIIATGL*LSASATPCGQS Trigger: GGATTGACCACAGGGAGTGGCAGAGGCAGAAAGCAAAAGACCAGTTGCAATTATCCAGAATCCTGAATTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000652991.1 ENST00000654613.1 ENST00000654654.1 ENST00000655828.1 ENST00000658433.1 ENST00000659596.1 ENST00000660321.1 ENST00000665462.1 ENST00000666541.1 ENST00000667247.1 ENST00000668371.1 |
||
| CDS CCA 72 bp | AACACAGGCTCAATTCAGGATTCTCCAAGTTTCCGCTaGCAACCTTCCATCTCAAGCTTAGATAACAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: NTGSIQDSPSFR*QPSISSLDNNL Trigger: GAGATTGTTATCTAAGCTTGAGATGGAAGGTTGCCAGCGGAAACTTGGAGAATCCTGAATTGAGCCTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662893.1 ENST00000664609.1 |
||
| CDS CCA 72 bp | AGGAGGAAACCAATAACCTTGAGGGTTTCTAGGAACTaGGAACACAGGCTCAATTCAGGATTCTCCAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RRKPITLRVSRN*EHRLNSGFSKF Trigger: AAACTTGGAGAATCCTGAATTGAGCCTGTGTTCCCAGTTCCTAGAAACCCTCAAGGTTATTGGTTTCCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662893.1 ENST00000664609.1 |
||
| CDS CAA 72 bp | AAGAATAGCACTCTCCCATCTTCTCCATCCTCCAGGTaGGTTAAGAGACTTAGCATTAGCCTGTCTTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: KNSTLPSSPSSR*VKRLSISLSSS Trigger: TGATGAAGACAGGCTAATGCTAAGTCTCTTAACCAACCTGGAGGATGGAGAAGATGGGAGAGTGCTATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660321.1 |
||
| CDS CCA 72 bp | AGGAGGAAACCAATAACCTTGAGGGTTTCTAGGAACTaGGAACACAGGCTCAATTCAGGATTCTGGATTATT | + |
|
Preference number: 6 (lower is better) Translates to: RRKPITLRVSRN*EHRLNSGFWII Trigger: AATAATCCAGAATCCTGAATTGAGCCTGTGTTCCCAGTTCCTAGAAACCCTCAAGGTTATTGGTTTCCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000432677.2 ENST00000652722.1 ENST00000658361.1 ENST00000658459.1 ENST00000659517.1 ENST00000659959.1 ENST00000660053.1 ENST00000666274.1 ENST00000666438.1 ENST00000667174.1 ENST00000669649.1 |
||
| CDS CCA 72 bp | AGGAGGAAACCAATAACCTTGAGGGTTTCTAGGAACTaGGAACACAGGCTCAATTCAGGATTCTGGATAATT | + |
|
Preference number: 6 (lower is better) Translates to: RRKPITLRVSRN*EHRLNSGFWII Trigger: AATTATCCAGAATCCTGAATTGAGCCTGTGTTCCCAGTTCCTAGAAACCCTCAAGGTTATTGGTTTCCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000652991.1 ENST00000654613.1 ENST00000654654.1 ENST00000655828.1 ENST00000658433.1 ENST00000659596.1 ENST00000660321.1 ENST00000665462.1 ENST00000666541.1 ENST00000667247.1 ENST00000668371.1 |
||
| CDS CAA 90 bp | TTTCTAGGAACTGGGAACACAGGCTCAATTCAGGATTCTGGATTATaGCAACAGCCTCCATCTTTTACCTGGATAATTGCAACTGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FLGTGNTGSIQDSGL*QQPPSFTWIIATGL Trigger: AAGACCAGTTGCAATTATCCAGGTAAAAGATGGAGGCTGTTGCAATAATCCAGAATCCTGAATTGAGCCTGTGTTCCCAGTTCCTAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000432677.2 ENST00000652722.1 ENST00000658361.1 ENST00000658459.1 ENST00000659517.1 ENST00000659959.1 ENST00000660053.1 ENST00000666274.1 ENST00000666438.1 ENST00000667174.1 ENST00000669649.1 |
||
| CDS TCA 72 bp | CTGCTGGCTTCACTTGCACATTTCATTCAAAACAGTTaGAAAGTCCAGTGTGTTCATGGTGTTTTAACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLASLAHFIQNS*KVQCVHGVLTG Trigger: GCCAGTTAAAACACCATGAACACACTGGACTTTTCAACTGTTTTGAATGAAATGTGCAAGTGAAGCCAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000667247.1 ENST00000669649.1 |
||
| CDS CCA 72 bp | GATTCTGGATTATTGCAACAGCCTCCATCTTTTACCTaGATAATTGCAACTGGTCTTTTGCTTTCTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: DSGLLQQPPSFT*IIATGLLLSAS Trigger: AGAGGCAGAAAGCAAAAGACCAGTTGCAATTATCCAGGTAAAAGATGGAGGCTGTTGCAATAATCCAGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000432677.2 ENST00000652722.1 ENST00000658361.1 ENST00000658459.1 ENST00000659517.1 ENST00000659959.1 ENST00000660053.1 ENST00000666274.1 ENST00000666438.1 ENST00000667174.1 ENST00000669649.1 |
||
| CDS CAA 72 bp | GAAGTTTCTTTGTCACATGAAGAGAGCAGACATTTATaGAAATCTTACTATGCTTCGGGTGCTGGACTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EVSLSHEESRHL*KSYYASGAGLG Trigger: GCCTAGTCCAGCACCCGAAGCATAGTAAGATTTCAATAAATGTCTGCTCTCTTCATGTGACAAAGAAACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654613.1 ENST00000666274.1 ENST00000668371.1 |
||
| CDS TCA 72 bp | ATCTGTATCTCAAGTCCACAAATAAGCACTCAAGGTTaGTGTCAATCTTTGACACGTCATCTATTCCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ICISSPQISTQG*CQSLTRHLFPS Trigger: GCTTGGGAATAGATGACGTGTCAAAGATTGACATCAACCTTGAGTGCTTATTTGTGGACTTGAGATACAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655828.1 ENST00000660053.1 ENST00000666438.1 ENST00000667174.1 |
||
| CDS GCA 72 bp | GAGCAATCTAGCTTCCAAACACGATTTCACAACCACTaGAGTGATATCCTCCCTTCTCAAATAAGATTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: EQSSFQTRFHNH*SDILPSQIRLF Trigger: AAACAATCTTATTTGAGAAGGGAGGATATCACTGCAGTGGTTGTGAAATCGTGTTTGGAAGCTAGATTGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000652722.1 ENST00000658433.1 ENST00000658459.1 ENST00000659596.1 ENST00000660321.1 ENST00000662893.1 ENST00000665462.1 ENST00000666274.1 ENST00000667174.1 |
||
| CDS TCA 72 bp | GGATGGAATTTGATCGCGTTAAAGCCAATTTGTCACTaGAATACCCCAAAGTTCATTCATTATGGAGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: GWNLIALKPICH*NTPKFIHYGGI Trigger: GATTCCTCCATAATGAATGAACTTTGGGGTATTTCAGTGACAAATTGGCTTTAACGCGATCAAATTCCATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000432677.2 ENST00000652722.1 ENST00000652991.1 ENST00000655828.1 ENST00000658361.1 ENST00000658433.1 ENST00000659517.1 ENST00000659959.1 ENST00000665462.1 ENST00000666438.1 ENST00000667174.1 ENST00000668371.1 ENST00000669649.1 |
||
| CDS CAA 90 bp | ACACACTTTCATTGTAGGATGGAATTTGATCGCGTTAAAGCCAATTaGTCACTGAAATACCCCAAAGTTCATTCATTATGGAGGAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: THFHCRMEFDRVKAN*SLKYPKVHSLWRNP Trigger: AGGATTCCTCCATAATGAATGAACTTTGGGGTATTTCAGTGACAAATTGGCTTTAACGCGATCAAATTCCATCCTACAATGAAAGTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000432677.2 ENST00000652722.1 ENST00000652991.1 ENST00000655828.1 ENST00000658361.1 ENST00000658433.1 ENST00000659517.1 ENST00000659959.1 ENST00000665462.1 ENST00000666438.1 ENST00000667174.1 ENST00000668371.1 ENST00000669649.1 |
||
| CDS CAA 72 bp | CATTGTAGGATGGAATTTGATCGCGTTAAAGCCAATTaGTCACTGAAATACCCCAAAGTTCATTCATTATGG | + |
|
Preference number: 6 (lower is better) Translates to: HCRMEFDRVKAN*SLKYPKVHSLW Trigger: CCATAATGAATGAACTTTGGGGTATTTCAGTGACAAATTGGCTTTAACGCGATCAAATTCCATCCTACAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000432677.2 ENST00000652722.1 ENST00000652991.1 ENST00000655828.1 ENST00000658361.1 ENST00000658433.1 ENST00000659517.1 ENST00000659959.1 ENST00000665462.1 ENST00000666438.1 ENST00000667174.1 ENST00000668371.1 ENST00000669649.1 |
||
| CDS CCA 72 bp | AATTTGTCACTGAAATACCCCAAAGTTCATTCATTATaGAGGAATCCTAGACCCTGTAAACTTTTATTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: NLSLKYPKVHSL*RNPRPCKLLFR Trigger: CCGAAATAAAAGTTTACAGGGTCTAGGATTCCTCCATAATGAATGAACTTTGGGGTATTTCAGTGACAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000432677.2 ENST00000652722.1 ENST00000652991.1 ENST00000655828.1 ENST00000658361.1 ENST00000658433.1 ENST00000659517.1 ENST00000659959.1 ENST00000665462.1 ENST00000666438.1 ENST00000667174.1 ENST00000668371.1 ENST00000669649.1 |
||