Pregenerated sensors for LINC01834 (Homo sapiens)

Ensembl gene IDs: ENSG00000261316

Ensembl transcript IDs: ENST00000567374.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CTAAATATGGAGCCCATTACAAGGAAATCTGGTTCATGTTTCCGATaGAGGCACAGAGCCCCGCTTGGGCTGAAGGCCTGGGTCTCTGTG	+
Preference number: 5 (lower is better) Translates to: LNMEPITRKSGSCFR*RHRAPLGLKAWVSV Trigger: CACAGAGACCCAGGCCTTCAGCCCAAGCGGGGCTCTGTGCCTCCATCGGAAACATGAACCAGATTTCCTTGTAATGGGCTCCATATTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567374.1
CDS CCA 90 bp	TCTAAGGCTGCTGGGCCTAAATATGGAGCCCATTACAAGGAAATCTaGTTCATGTTTCCGATGGAGGCACAGAGCCCCGCTTGGGCTGAA	+
Preference number: 5 (lower is better) Translates to: SKAAGPKYGAHYKEI*FMFPMEAQSPAWAE Trigger: TTCAGCCCAAGCGGGGCTCTGTGCCTCCATCGGAAACATGAACCAGATTTCCTTGTAATGGGCTCCATATTTAGGCCCAGCAGCCTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567374.1
CDS CCA 72 bp	TGGTTCATGTTTCCGATGGAGGCACAGAGCCCCGCTTaGGCTGAAGGCCTGGGTCTCTGTGTTGCTGGCACA	+
Preference number: 6 (lower is better) Translates to: WFMFPMEAQSPA*AEGLGLCVAGT Trigger: TGTGCCAGCAACACAGAGACCCAGGCCTTCAGCCCAAGCGGGGCTCTGTGCCTCCATCGGAAACATGAACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567374.1
CDS GCA 72 bp	ACAGGCTTACAGCAGCAGGCATCCCTTCTTCCTGGTTaGCTGGTATACCAGGGTGAGGGCCCAGCAGTGACA	+
Preference number: 6 (lower is better) Translates to: TGLQQQASLLPG*LVYQGEGPAVT Trigger: TGTCACTGCTGGGCCCTCACCCTGGTATACCAGGCAACCAGGAAGAAGGGATGCCTGCTGCTGTAAGCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567374.1
CDS CCA 72 bp	GAGCCCATTACAAGGAAATCTGGTTCATGTTTCCGATaGAGGCACAGAGCCCCGCTTGGGCTGAAGGCCTGG	+
Preference number: 6 (lower is better) Translates to: EPITRKSGSCFR*RHRAPLGLKAW Trigger: CCAGGCCTTCAGCCCAAGCGGGGCTCTGTGCCTCCATCGGAAACATGAACCAGATTTCCTTGTAATGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567374.1
CDS CCA 72 bp	GCTGGGCCTAAATATGGAGCCCATTACAAGGAAATCTaGTTCATGTTTCCGATGGAGGCACAGAGCCCCGCT	+
Preference number: 6 (lower is better) Translates to: AGPKYGAHYKEI*FMFPMEAQSPA Trigger: AGCGGGGCTCTGTGCCTCCATCGGAAACATGAACCAGATTTCCTTGTAATGGGCTCCATATTTAGGCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567374.1
CDS CAA 72 bp	GGGCTGAAATTGTGCAGGAAGGACATAGCTTTCCTATaGGCCAGACATCTAAGGCTGCTGGGCCTAAATATG	+
Preference number: 6 (lower is better) Translates to: GLKLCRKDIAFL*ARHLRLLGLNM Trigger: CATATTTAGGCCCAGCAGCCTTAGATGTCTGGCCAATAGGAAAGCTATGTCCTTCCTGCACAATTTCAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567374.1
CDS CAA 90 bp	AGATTCTTAGGGCTGAAATTGTGCAGGAAGGACATAGCTTTCCTATaGGCCAGACATCTAAGGCTGCTGGGCCTAAATATGGAGCCCATT	+
Preference number: 6 (lower is better) Translates to: RFLGLKLCRKDIAFL*ARHLRLLGLNMEPI Trigger: AATGGGCTCCATATTTAGGCCCAGCAGCCTTAGATGTCTGGCCAATAGGAAAGCTATGTCCTTCCTGCACAATTTCAGCCCTAAGAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567374.1

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