Pregenerated sensors for LINC01833 (Homo sapiens)
Ensembl gene IDs: ENSG00000259439Ensembl transcript IDs: ENST00000430847.2, ENST00000432125.2, ENST00000437916.2, ENST00000444871.2, ENST00000560399.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCTGGACCGCGAGGTGGGCTCGGTGGGCGGCGCCGAGCTCGGCTCTaGTGGGAGGCGCGGACAGCCCGGGGCTGCCACCTGCCCCACCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGPRGGLGGRRRARL*WEARTARGCHLPHR Trigger: CCGGTGGGGCAGGTGGCAGCCCCGGGCTGTCCGCGCCTCCCAGCAGAGCCGAGCTCGGCGCCGCCCACCGAGCCCACCTCGCGGTCCAGC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS GCA 90 bp | CTGCTTCGCGTTCCGGAACCGCGGTCGCCACCCAAGCAGGCGGGGTaGGGCAGGGCGGCAGGGCGGCAGGCGCTGGGGCAGAGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLRVPEPRSPPKQAG*GRAAGRQALGQRLG Trigger: CCCCAGCCTCTGCCCCAGCGCCTGCCGCCCTGCCGCCCTGCCGCACCCCGCCTGCTTGGGTGGCGACCGCGGTTCCGGAACGCGAAGCAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS GCA 90 bp | CGGCGCCGAGCTCGGCTCTGCTGGGAGGCGCGGACAGCCCGGGGCTaGCACCTGCCCCACCGGGTCCTGGCGCACAAAGCTACACGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RRRARLCWEARTARG*HLPHRVLAHKATRL Trigger: GAGGCGTGTAGCTTTGTGCGCCAGGACCCGGTGGGGCAGGTGGCAGCCCCGGGCTGTCCGCGCCTCCCAGCAGAGCCGAGCTCGGCGCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS GCA 90 bp | CCACCTGCCCCACCGGGTCCTGGCGCACAAAGCTACACGCCTCTCTaGAGCCCTCTGCCCTGCTTCGCGTTCCGGAACCGCGGTCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PPAPPGPGAQSYTPL*SPLPCFAFRNRGRH Trigger: GTGGCGACCGCGGTTCCGGAACGCGAAGCAGGGCAGAGGGCTGCAGAGAGGCGTGTAGCTTTGTGCGCCAGGACCCGGTGGGGCAGGTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS CCA 90 bp | GGAGCACCTCGTATCCGGCGCGCGGGCCCAGTGTGGGACTGCGGCTaGGAGCCCGGGCCCTCCGGGAGTGAAGATACCTTTGGAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GAPRIRRAGPVWDCG*EPGPSGSEDTFGGE Trigger: CTCACCTCCAAAGGTATCTTCACTCCCGGAGGGCCCGGGCTCCCAGCCGCAGTCCCACACTGGGCCCGCGCGCCGGATACGAGGTGCTCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430847.2 |
||
| CDS GCA 90 bp | CACCGGGTCCTGGCGCACAAAGCTACACGCCTCTCTGCAGCCCTCTaGCCTGCTTCGCGTTCCGGAACCGCGGTCGCCACCCAAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HRVLAHKATRLSAAL*PASRSGTAVATQAG Trigger: GCCTGCTTGGGTGGCGACCGCGGTTCCGGAACGCGAAGCAGGGCAGAGGGCTGCAGAGAGGCGTGTAGCTTTGTGCGCCAGGACCCGGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS CCA 90 bp | ATTTTTGCCGTCGGAGCACCTCGTATCCGGCGCGCGGGCCCAGTGTaGGACTGCGGCTGGGAGCCCGGGCCCTCCGGGAGTGAAGATACC | + |
|
Preference number: 5 (lower is better) Translates to: IFAVGAPRIRRAGPV*DCGWEPGPSGSEDT Trigger: GGTATCTTCACTCCCGGAGGGCCCGGGCTCCCAGCCGCAGTCCCACACTGGGCCCGCGCGCCGGATACGAGGTGCTCCGACGGCAAAAAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000430847.2 |
||
| CDS TCA 90 bp | CGGTGGGCAAGGGCTGAATCCCCCTTGGCGCACAGCCCAGGGGATTaGGAACATTTGGAAAGGGAGAACTGGAGTGAACAAGCCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RWARAESPLAHSPGD*EHLERENWSEQAML Trigger: CAACATGGCTTGTTCACTCCAGTTCTCCCTTTCCAAATGTTCTCAATCCCCTGGGCTGTGCGCCAAGGGGGATTCAGCCCTTGCCCACCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS GCA 90 bp | GTTTTCCGGGTAGTTGATTTCTTCTTCACAAAATGGGCCCTCCTCTaGCCCTTGGAGGGTGGTCATCCGACTTGCTGGCCCAGAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VFRVVDFFFTKWALL*PLEGGHPTCWPRKS Trigger: GGACTTTCTGGGCCAGCAAGTCGGATGACCACCCTCCAAGGGGCAGAGGAGGGCCCATTTTGTGAAGAAGAAATCAACTACCCGGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444871.2 |
||
| CDS CCA 90 bp | ACAAACATTCAGACCATAGCCGGTGGGCAAGGGCTGAATCCCCCTTaGCGCACAGCCCAGGGGATTGAGAACATTTGGAAAGGGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: TNIQTIAGGQGLNPP*RTAQGIENIWKGRT Trigger: AGTTCTCCCTTTCCAAATGTTCTCAATCCCCTGGGCTGTGCGCCAAGGGGGATTCAGCCCTTGCCCACCGGCTATGGTCTGAATGTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS TCA 90 bp | ATACTGATGCATACTATAGATTGCTGCAGAGGGCTGGAGACCTTCTaGGGACGTCAGCGCTGTGACTCTGGGCAGAACTTCACAACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: ILMHTIDCCRGLETF*GRQRCDSGQNFTTP Trigger: AGGGGTTGTGAAGTTCTGCCCAGAGTCACAGCGCTGACGTCCTCAGAAGGTCTCCAGCCCTCTGCAGCAATCTATAGTATGCATCAGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS TCA 90 bp | TTGGAAAGGGAGAACTGGAGTGAACAAGCCATGTTGAAGGGTGAGTaGGTGCCCAGAAGCCATAGTCCTGGGAGTAGCATGATGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LERENWSEQAMLKGE*VPRSHSPGSSMMAV Trigger: CACTGCCATCATGCTACTCCCAGGACTATGGCTTCTGGGCACTCACTCACCCTTCAACATGGCTTGTTCACTCCAGTTCTCCCTTTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS CCA 90 bp | TACCCTCCCTTGCAGTGTAATCTGGGAGTGGCTGCAGATGTGACGTaGGATGCAGTCCTCACATGCCATATAAAGAGAAGACCCAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: YPPLQCNLGVAADVT*DAVLTCHIKRRPNR Trigger: TCTGTTGGGTCTTCTCTTTATATGGCATGTGAGGACTGCATCCCACGTCACATCTGCAGCCACTCCCAGATTACACTGCAAGGGAGGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432125.2 ENST00000437916.2 |
||
| CDS TCA 90 bp | GGCACACAAACAGGAAGAAACTGGCAGGTCTTTCCGGTGGTGACGTaGAACTCAAAGCCATTGGAAGGATGGCCGTGTGTTCTGAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: GTQTGRNWQVFPVVT*NSKPLEGWPCVLKM Trigger: CATTTTCAGAACACACGGCCATCCTTCCAATGGCTTTGAGTTTCACGTCACCACCGGAAAGACCTGCCAGTTTCTTCCTGTTTGTGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS TCA 90 bp | TTTCTGGAAGATGGGGCCAAGTGTTCTTCAGAATTCAGCTTGGGTTaGGATGTTCCCTTCTTCCTCCTCAGCTTGGTGAGTCTCCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: FLEDGAKCSSEFSLG*DVPFFLLSLVSLQT Trigger: AGTCTGGAGACTCACCAAGCTGAGGAGGAAGAAGGGAACATCTCAACCCAAGCTGAATTCTGAAGAACACTTGGCCCCATCTTCCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432125.2 ENST00000437916.2 |
||
| CDS GCA 90 bp | GCTATTAATTTAGTAATCACTGTAGTTAAAAATGTATGGGATTTTTaGCGTCGGAGCACCTCGTATCCGGCGCGCGGGCCCAGTGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AINLVITVVKNVWDF*RRSTSYPARGPSVG Trigger: TCCCACACTGGGCCCGCGCGCCGGATACGAGGTGCTCCGACGGCAAAAATCCCATACATTTTTAACTACAGTGATTACTAAATTAATAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000430847.2 |
||
| CDS CCA 90 bp | GCCTCCCAAACCCAACAAAGAGTAGCAAAAACGGGCAAAATGAACTaGGCGTCTTGCTTCCGCATGAATAAGCAATCAGCCCTCTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASQTQQRVAKTGKMN*ASCFRMNKQSALSE Trigger: TTCTGAGAGGGCTGATTGCTTATTCATGCGGAAGCAAGACGCCCAGTTCATTTTGCCCGTTTTTGCTACTCTTTGTTGGGTTTGGGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437916.2 ENST00000560399.1 |
||
| CDS CCA 90 bp | TTAGTGCCTGCTATTAATTTAGTAATCACTGTAGTTAAAAATGTATaGGATTTTTGCCGTCGGAGCACCTCGTATCCGGCGCGCGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVPAINLVITVVKNV*DFCRRSTSYPARGP Trigger: GGGCCCGCGCGCCGGATACGAGGTGCTCCGACGGCAAAAATCCCATACATTTTTAACTACAGTGATTACTAAATTAATAGCAGGCACTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000430847.2 |
||
| CDS GCA 90 bp | ACCCAACAAAGAGTAGCAAAAACGGGCAAAATGAACTGGGCGTCTTaGTTCCGCATGAATAAGCAATCAGCCCTCTCAGAAGTTACACCA | + |
|
Preference number: 5 (lower is better) Translates to: TQQRVAKTGKMNWAS*FRMNKQSALSEVTP Trigger: TGGTGTAACTTCTGAGAGGGCTGATTGCTTATTCATGCGGAAGCAAGACGCCCAGTTCATTTTGCCCGTTTTTGCTACTCTTTGTTGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437916.2 ENST00000560399.1 |
||
| CDS GCA 90 bp | TTTTTCACAGTGACACTTGAGTGCAGCTTCAGAAATATGCCACCTTaGCATTTATCATTTTCAGGGCACGGGTGTCGGAAAGGAGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FFTVTLECSFRNMPP*HLSFSGHGCRKGVC Trigger: GCAAACTCCTTTCCGACACCCGTGCCCTGAAAATGATAAATGGCAAGGTGGCATATTTCTGAAGCTGCACTCAAGTGTCACTGTGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437916.2 ENST00000560399.1 |
||
| CDS TCA 90 bp | CTTCTGGTTCATTCTTGGTGCCCTGGCCAAAACTTTCCCTCTATGTaGTTTAGGATTTCTGGAAGATGGGGCCAAGTGTTCTTCAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: LLVHSWCPGQNFPSM*FRISGRWGQVFFRI Trigger: AATTCTGAAGAACACTTGGCCCCATCTTCCAGAAATCCTAAATCACATAGAGGGAAAGTTTTGGCCAGGGCACCAAGAATGAACCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000432125.2 ENST00000437916.2 |
||
| CDS TCA 90 bp | GGGCCCAAACTAAGGCGTCTAGAACGAGATATCAAAATTAGAGCTTaGGTAGGGCTTAAAGAGCCAGAAGTAAAACTAAAGCATCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GPKLRRLERDIKIRA*VGLKEPEVKLKHLN Trigger: ATTGAGATGCTTTAGTTTTACTTCTGGCTCTTTAAGCCCTACTCAAGCTCTAATTTTGATATCTCGTTCTAGACGCCTTAGTTTGGGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS GCA 72 bp | GTTCCGGAACCGCGGTCGCCACCCAAGCAGGCGGGGTaGGGCAGGGCGGCAGGGCGGCAGGCGCTGGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VPEPRSPPKQAG*GRAAGRQALGQ Trigger: CTGCCCCAGCGCCTGCCGCCCTGCCGCCCTGCCGCACCCCGCCTGCTTGGGTGGCGACCGCGGTTCCGGAAC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS GCA 72 bp | CGAGGTGGGCTCGGTGGGCGGCGCCGAGCTCGGCTCTaGTGGGAGGCGCGGACAGCCCGGGGCTGCCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGGLGGRRRARL*WEARTARGCHL Trigger: CAGGTGGCAGCCCCGGGCTGTCCGCGCCTCCCAGCAGAGCCGAGCTCGGCGCCGCCCACCGAGCCCACCTCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS CCA 72 bp | GTCGGAGCACCTCGTATCCGGCGCGCGGGCCCAGTGTaGGACTGCGGCTGGGAGCCCGGGCCCTCCGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VGAPRIRRAGPV*DCGWEPGPSGS Trigger: ACTCCCGGAGGGCCCGGGCTCCCAGCCGCAGTCCCACACTGGGCCCGCGCGCCGGATACGAGGTGCTCCGAC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430847.2 |
||
| CDS GCA 72 bp | CTAGGATCGGGCGGCCGCTCCAGGAGGCGGGAGTACTaGTTCAGGCCAGAGCCGAAAGGCGCTGGCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGSGGRSRRREY*FRPEPKGAGGG Trigger: GCCGCCGCCAGCGCCTTTCGGCTCTGGCCTGAAGCAGTACTCCCGCCTCCTGGAGCGGCCGCCCGATCCTAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444871.2 |
||
| CDS GCA 72 bp | CTGGCGCACAAAGCTACACGCCTCTCTGCAGCCCTCTaGCCTGCTTCGCGTTCCGGAACCGCGGTCGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LAHKATRLSAAL*PASRSGTAVAT Trigger: GGTGGCGACCGCGGTTCCGGAACGCGAAGCAGGGCAGAGGGCTGCAGAGAGGCGTGTAGCTTTGTGCGCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS GCA 72 bp | CCACCGGGTCCTGGCGCACAAAGCTACACGCCTCTCTaGAGCCCTCTGCCCTGCTTCGCGTTCCGGAACCGC | + |
|
Preference number: 6 (lower is better) Translates to: PPGPGAQSYTPL*SPLPCFAFRNR Trigger: GCGGTTCCGGAACGCGAAGCAGGGCAGAGGGCTGCAGAGAGGCGTGTAGCTTTGTGCGCCAGGACCCGGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS GCA 72 bp | GTCTCCAGACTTTCCCGCTCCAGGAGGCGGGAGTACTaGTTCAGGCCAGAGCCGAAAGGCGCTGGCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: VSRLSRSRRREY*FRPEPKGAGGG Trigger: GCCGCCGCCAGCGCCTTTCGGCTCTGGCCTGAAGCAGTACTCCCGCCTCCTGGAGCGGGAAAGTCTGGAGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS CCA 72 bp | TCCCGGCCACCTGTTGAGAATCCATGTGGGGTCGGCTaGCTCCGGAGTTGCGCAAGGTGGACACACAAAACC | + |
|
Preference number: 6 (lower is better) Translates to: SRPPVENPCGVG*LRSCARWTHKT Trigger: GGTTTTGTGTGTCCACCTTGCGCAACTCCGGAGCCAGCCGACCCCACATGGATTCTCAACAGGTGGCCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432125.2 |
||
| CDS CCA 72 bp | CACCGGCCACCTGTTGAGAATCCATGTGGGGTCGGCTaGCTCCGGAGTTGCGCAAGGTGGACACACAAAACC | + |
|
Preference number: 6 (lower is better) Translates to: HRPPVENPCGVG*LRSCARWTHKT Trigger: GGTTTTGTGTGTCCACCTTGCGCAACTCCGGAGCCAGCCGACCCCACATGGATTCTCAACAGGTGGCCGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430847.2 |
||
| CDS CCA 72 bp | TGCCGGCCACCTGTTGAGAATCCATGTGGGGTCGGCTaGCTCCGGAGTTGCGCAAGGTGGACACACAAAACC | + |
|
Preference number: 6 (lower is better) Translates to: CRPPVENPCGVG*LRSCARWTHKT Trigger: GGTTTTGTGTGTCCACCTTGCGCAACTCCGGAGCCAGCCGACCCCACATGGATTCTCAACAGGTGGCCGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444871.2 |
||
| CDS TCA 72 bp | CAGAGGGCTGGAGACCTTCTGAGGACGTCAGCGCTGTaGCTCTGGGCAGAACTTCACAACCCCTTCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QRAGDLLRTSAL*LWAELHNPFSS Trigger: GGAAGAGAAGGGGTTGTGAAGTTCTGCCCAGAGTCACAGCGCTGACGTCCTCAGAAGGTCTCCAGCCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432125.2 ENST00000437916.2 |
||
| CDS CCA 72 bp | CAGACCATAGCCGGTGGGCAAGGGCTGAATCCCCCTTaGCGCACAGCCCAGGGGATTGAGAACATTTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QTIAGGQGLNPP*RTAQGIENIWK Trigger: TTTCCAAATGTTCTCAATCCCCTGGGCTGTGCGCCAAGGGGGATTCAGCCCTTGCCCACCGGCTATGGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS GCA 72 bp | GTAGTTGATTTCTTCTTCACAAAATGGGCCCTCCTCTaGCCCTTGGAGGGTGGTCATCCGACTTGCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VVDFFFTKWALL*PLEGGHPTCWP Trigger: GGGCCAGCAAGTCGGATGACCACCCTCCAAGGGGCAGAGGAGGGCCCATTTTGTGAAGAAGAAATCAACTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444871.2 |
||
| CDS CCA 72 bp | CTTCACAAAATGGGCCCTCCTCTGCCCCTTGGAGGGTaGTCATCCGACTTGCTGGCCCAGAAAGTCCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LHKMGPPLPLGG*SSDLLAQKVLF Trigger: AAAAAGGACTTTCTGGGCCAGCAAGTCGGATGACCACCCTCCAAGGGGCAGAGGAGGGCCCATTTTGTGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444871.2 |
||
| CDS CAA 90 bp | TCTACAGACCCCTCTACTCCCTACCCACTCCTAATCTACCCTCCCTaGCAGTGTAATCTGGGAGTGGCTGCAGATGTGACGTGGGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: STDPSTPYPLLIYPP*QCNLGVAADVTWDA Trigger: TGCATCCCACGTCACATCTGCAGCCACTCCCAGATTACACTGCAAGGGAGGGTAGATTAGGAGTGGGTAGGGAGTAGAGGGGTCTGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432125.2 ENST00000437916.2 |
||
| CDS TCA 72 bp | CATACTATAGATTGCTGCAGAGGGCTGGAGACCTTCTaGGGACGTCAGCGCTGTGACTCTGGGCAGAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: HTIDCCRGLETF*GRQRCDSGQNF Trigger: GAAGTTCTGCCCAGAGTCACAGCGCTGACGTCCTCAGAAGGTCTCCAGCCCTCTGCAGCAATCTATAGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS TCA 72 bp | AGGGCTGAATCCCCCTTGGCGCACAGCCCAGGGGATTaGGAACATTTGGAAAGGGAGAACTGGAGTGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: RAESPLAHSPGD*EHLERENWSEQ Trigger: TTGTTCACTCCAGTTCTCCCTTTCCAAATGTTCTCAATCCCCTGGGCTGTGCGCCAAGGGGGATTCAGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS TCA 72 bp | TGTCTGGTGAGGGCCCATTTCCTGGTTCACAGATGGTaGTTTACACGATGGAGGGGGCAAGGCAGCCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: CLVRAHFLVHRW*FTRWRGQGSLF Trigger: AAAAAGGCTGCCTTGCCCCCTCCATCGTGTAAATCACCATCTGTGAACCAGGAAATGGGCCCTCACCAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS TCA 72 bp | CAGAAACATGTCCTCCTGTGGCGTTTTCCGGGTAGTTaGTTTCTTCTTCACAAAATGGGCCCTCCTCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QKHVLLWRFPGS*FLLHKMGPPLP Trigger: GGGCAGAGGAGGGCCCATTTTGTGAAGAAGAAATCAACTACCCGGAAAACGCCACAGGAGGACATGTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444871.2 |
||
| CDS TCA 72 bp | ACAGGAAGAAACTGGCAGGTCTTTCCGGTGGTGACGTaGAACTCAAAGCCATTGGAAGGATGGCCGTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: TGRNWQVFPVVT*NSKPLEGWPCV Trigger: AACACACGGCCATCCTTCCAATGGCTTTGAGTTTCACGTCACCACCGGAAAGACCTGCCAGTTTCTTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS TCA 72 bp | CACAAACAGGAAGAAACTGGCAGGTCTTTCCGGTGGTaGCGTGAAACTCAAAGCCATTGGAAGGATGGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: HKQEETGRSFRW*RETQSHWKDGR Trigger: ACGGCCATCCTTCCAATGGCTTTGAGTTTCACGTCACCACCGGAAAGACCTGCCAGTTTCTTCCTGTTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS CAA 90 bp | GGCAGAACTTCACAACCCCTTCTCTTCCAGGTAGGTGCCTTCCTTTaGTATGTGCAGCCACTGGCTGTCTCTGAGACATATTTTCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRTSQPLLFQVGAFL*YVQPLAVSETYFLG Trigger: ACCCAGAAAATATGTCTCAGAGACAGCCAGTGGCTGCACATACAAAAGGAAGGCACCTACCTGGAAGAGAAGGGGTTGTGAAGTTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000432125.2 ENST00000437916.2 |
||
| CDS TCA 72 bp | GATGGGGCCAAGTGTTCTTCAGAATTCAGCTTGGGTTaGGATGTTCCCTTCTTCCTCCTCAGCTTGGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: DGAKCSSEFSLG*DVPFFLLSLVS Trigger: ACTCACCAAGCTGAGGAGGAAGAAGGGAACATCTCAACCCAAGCTGAATTCTGAAGAACACTTGGCCCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432125.2 ENST00000437916.2 |
||
| CDS CCA 72 bp | TGGAAGATGGGGCCAAGTGTTCTTCAGAATTCAGCTTaGGTTGAGATGTTCCCTTCTTCCTCCTCAGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: WKMGPSVLQNSA*VEMFPSSSSAW Trigger: CCAAGCTGAGGAGGAAGAAGGGAACATCTCAACCCAAGCTGAATTCTGAAGAACACTTGGCCCCATCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432125.2 ENST00000437916.2 |
||
| CDS CAA 90 bp | ATTTCTGGAAGATGGGGCCAAGTGTTCTTCAGAATTCAGCTTGGGTaGAGATGTTCCCTTCTTCCTCCTCAGCTTGGTGAGTCTCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ISGRWGQVFFRIQLG*RCSLLPPQLGESPD Trigger: GTCTGGAGACTCACCAAGCTGAGGAGGAAGAAGGGAACATCTCAACCCAAGCTGAATTCTGAAGAACACTTGGCCCCATCTTCCAGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432125.2 ENST00000437916.2 |
||
| CDS CCA 72 bp | TTGCAGTGTAATCTGGGAGTGGCTGCAGATGTGACGTaGGATGCAGTCCTCACATGCCATATAAAGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LQCNLGVAADVT*DAVLTCHIKRR Trigger: TCTTCTCTTTATATGGCATGTGAGGACTGCATCCCACGTCACATCTGCAGCCACTCCCAGATTACACTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432125.2 ENST00000437916.2 |
||
| CDS GCA 72 bp | AGAGTAGCAAAAACGGGCAAAATGAACTGGGCGTCTTaGTTCCGCATGAATAAGCAATCAGCCCTCTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RVAKTGKMNWAS*FRMNKQSALSE Trigger: TTCTGAGAGGGCTGATTGCTTATTCATGCGGAAGCAAGACGCCCAGTTCATTTTGCCCGTTTTTGCTACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437916.2 ENST00000560399.1 |
||
| CDS CCA 72 bp | ACCCAACAAAGAGTAGCAAAAACGGGCAAAATGAACTaGGCGTCTTGCTTCCGCATGAATAAGCAATCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TQQRVAKTGKMN*ASCFRMNKQSA Trigger: GGCTGATTGCTTATTCATGCGGAAGCAAGACGCCCAGTTCATTTTGCCCGTTTTTGCTACTCTTTGTTGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437916.2 ENST00000560399.1 |
||
| CDS TCA 72 bp | TCCTTGGCTTCAGGAGACCCCCTTTCCCAACTCCTTTaGCCTTCAAACATCGATTGCAGAATCAATGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLASGDPLSQLL*PSNIDCRINVH Trigger: ATGAACATTGATTCTGCAATCGATGTTTGAAGGTCAAAGGAGTTGGGAAAGGGGGTCTCCTGAAGCCAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS CAA 72 bp | TTCCTTGGCTTCAGGAGACCCCCTTTCCCAACTCCTTaGACCTTCAAACATCGATTGCAGAATCAATGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FLGFRRPPFPTP*TFKHRLQNQCS Trigger: TGAACATTGATTCTGCAATCGATGTTTGAAGGTCAAAGGAGTTGGGAAAGGGGGTCTCCTGAAGCCAAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS CAA 90 bp | AAACATCGATTGCAGAATCAATGTTCATTGATTATTGTGCTTTCATaGGGACACAGCGCAGACACGCACAAATCAGCCAGCTCTTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KHRLQNQCSLIIVLS*GHSADTHKSASSSL Trigger: CAGGGAAGAGCTGGCTGATTTGTGCGTGTCTGCGCTGTGTCCCAATGAAAGCACAATAATCAATGAACATTGATTCTGCAATCGATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS CAA 72 bp | TTGCAGAATCAATGTTCATTGATTATTGTGCTTTCATaGGGACACAGCGCAGACACGCACAAATCAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LQNQCSLIIVLS*GHSADTHKSAS Trigger: GCTGGCTGATTTGTGCGTGTCTGCGCTGTGTCCCAATGAAAGCACAATAATCAATGAACATTGATTCTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS CAA 72 bp | AAAATTGGAGTAATGGACTCAGCTTCTGGTTCATTCTaGGTGCCCTGGCCAAAACTTTCCCTCTATGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: KIGVMDSASGSF*VPWPKLSLYVI Trigger: AATCACATAGAGGGAAAGTTTTGGCCAGGGCACCAAGAATGAACCAGAAGCTGAGTCCATTACTCCAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000432125.2 ENST00000437916.2 |
||
| CDS CAA 90 bp | CCAACTCCTTTGACCTTCAAACATCGATTGCAGAATCAATGTTCATaGATTATTGTGCTTTCATTGGGACACAGCGCAGACACGCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: PTPLTFKHRLQNQCS*IIVLSLGHSADTHK Trigger: TTTGTGCGTGTCTGCGCTGTGTCCCAATGAAAGCACAATAATCAATGAACATTGATTCTGCAATCGATGTTTGAAGGTCAAAGGAGTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS CAA 90 bp | TTCAGGAGACCCCCTTTCCCAACTCCTTTGACCTTCAAACATCGATaGCAGAATCAATGTTCATTGATTATTGTGCTTTCATTGGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: FRRPPFPTPLTFKHR*QNQCSLIIVLSLGH Trigger: GTGTCCCAATGAAAGCACAATAATCAATGAACATTGATTCTGCAATCGATGTTTGAAGGTCAAAGGAGTTGGGAAAGGGGGTCTCCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS CAA 90 bp | ACAATGCTTTTCCTTGGCTTCAGGAGACCCCCTTTCCCAACTCCTTaGACCTTCAAACATCGATTGCAGAATCAATGTTCATTGATTATT | + |
|
Preference number: 6 (lower is better) Translates to: TMLFLGFRRPPFPTP*TFKHRLQNQCSLII Trigger: AATAATCAATGAACATTGATTCTGCAATCGATGTTTGAAGGTCAAAGGAGTTGGGAAAGGGGGTCTCCTGAAGCCAAGGAAAAGCATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS CAA 72 bp | CAAGATACATCTCACCTACCCAATTATGGCCAATATTaGGGAGCCAGGATTTATGATTCAGAGTCAGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: QDTSHLPNYGQY*GARIYDSESVF Trigger: GAAAACTGACTCTGAATCATAAATCCTGGCTCCCAAATATTGGCCATAATTGGGTAGGTGAGATGTATCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS CAA 72 bp | TTGACCTTCAAACATCGATTGCAGAATCAATGTTCATaGATTATTGTGCTTTCATTGGGACACAGCGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LTFKHRLQNQCS*IIVLSLGHSAD Trigger: GTCTGCGCTGTGTCCCAATGAAAGCACAATAATCAATGAACATTGATTCTGCAATCGATGTTTGAAGGTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS TCA 72 bp | ACACTTAGTCCATTAAAGATTTTTCACAGTGACACTTaGGTGCAGCTTCAGAAATATGCCACCTTGCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: TLSPLKIFHSDT*VQLQKYATLPF Trigger: AAATGGCAAGGTGGCATATTTCTGAAGCTGCACTCAAGTGTCACTGTGAAAAATCTTTAATGGACTAAGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437916.2 ENST00000560399.1 |
||
| CDS TCA 72 bp | CTAAGGCGTCTAGAACGAGATATCAAAATTAGAGCTTaGGTAGGGCTTAAAGAGCCAGAAGTAAAACTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LRRLERDIKIRA*VGLKEPEVKLK Trigger: CTTTAGTTTTACTTCTGGCTCTTTAAGCCCTACTCAAGCTCTAATTTTGATATCTCGTTCTAGACGCCTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437916.2 |
||
| CDS CAA 72 bp | AGCCCTCTCAGAAGTTACACCAGAAAGTTGTTAAACTaGATAGAAGAAGCTTTTCCAACCATACTGATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SPLRSYTRKLLN*IEEAFPTILMH Trigger: ATGCATCAGTATGGTTGGAAAAGCTTCTTCTATCAAGTTTAACAACTTTCTGGTGTAACTTCTGAGAGGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437916.2 ENST00000560399.1 |
||