Pregenerated sensors for LINC01832 (Homo sapiens)

Ensembl gene IDs: ENSG00000224231

Ensembl transcript IDs: ENST00000446520.2

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CCCAGCTGCACACTTCAGGACCTCAGCATATTCTCTTCAGGGTCTTaGACTCCCTCCATGCCACCAGTGTTTCTCTGCTCCACATGGGTC	+
Preference number: 5 (lower is better) Translates to: PSCTLQDLSIFSSGS*TPSMPPVFLCSTWV Trigger: GACCCATGTGGAGCAGAGAAACACTGGTGGCATGGAGGGAGTGCAAGACCCTGAAGAGAATATGCTGAGGTCCTGAAGTGTGCAGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446520.2
CDS TCA 90 bp	TATTGTTCTATCCACGCATTGAATTTTGGTTTAGGGGTCTCTGGTTaGGCAGAGGGTTGCTTGAGTGAGTTTAGAAGGTGGCATCTGTTT	+
Preference number: 5 (lower is better) Translates to: YCSIHALNFGLGVSG*AEGCLSEFRRWHLF Trigger: AAACAGATGCCACCTTCTAAACTCACTCAAGCAACCCTCTGCTCAACCAGAGACCCCTAAACCAAAATTCAATGCGTGGATAGAACAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446520.2
CDS TCA 90 bp	TCAAGCAAATTCATAATGATGCTGGGAGGTAAAACCCATCATTACTaGAAGCACCCTTTGCACATATTGTTCTATCCACGCATTGAATTT	+
Preference number: 5 (lower is better) Translates to: SSKFIMMLGGKTHHY*KHPLHILFYPRIEF Trigger: AAATTCAATGCGTGGATAGAACAATATGTGCAAAGGGTGCTTTCAGTAATGATGGGTTTTACCTCCCAGCATCATTATGAATTTGCTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446520.2
CDS GCA 90 bp	GATACCTTAGCAGTTTCAAGGTTATCAAGTGATGGAAAATCCTACTaGTTACTTCAAGGTGTAACATATACAACTGTGCTGTCATCCATT	+
Preference number: 5 (lower is better) Translates to: DTLAVSRLSSDGKSY*LLQGVTYTTVLSSI Trigger: AATGGATGACAGCACAGTTGTATATGTTACACCTTGAAGTAAGCAGTAGGATTTTCCATCACTTGATAACCTTGAAACTGCTAAGGTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446520.2
CDS CAA 90 bp	CCCCAGCTGCACACTTCAGGACCTCAGCATATTCTCTTCAGGGTCTaGCACTCCCTCCATGCCACCAGTGTTTCTCTGCTCCACATGGGT	+
Preference number: 6 (lower is better) Translates to: PQLHTSGPQHILFRV*HSLHATSVSLLHMG Trigger: ACCCATGTGGAGCAGAGAAACACTGGTGGCATGGAGGGAGTGCAAGACCCTGAAGAGAATATGCTGAGGTCCTGAAGTGTGCAGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446520.2
CDS TCA 72 bp	CCAAGAAACTGGATCTGTAGAGGCATTCACACCCCTTaGGCTAGCTCTAAGCATGGAGGGGAAGGCTTGCCT	+
Preference number: 6 (lower is better) Translates to: PRNWICRGIHTP*ASSKHGGEGLP Trigger: AGGCAAGCCTTCCCCTCCATGCTTAGAGCTAGCTCAAGGGGTGTGAATGCCTCTACAGATCCAGTTTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446520.2
CDS GCA 72 bp	CTGAAGGCACTTATCAGTCTCAGGCTAGGGGAGTATTaGTTCACTGGAAAACATCAGCAGGGACCCTTTGTG	+
Preference number: 6 (lower is better) Translates to: LKALISLRLGEY*FTGKHQQGPFV Trigger: CACAAAGGGTCCCTGCTGATGTTTTCCAGTGAAGCAATACTCCCCTAGCCTGAGACTGATAAGTGCCTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446520.2
CDS CAA 90 bp	AGCCTAACTTCTGAAGGCACTTATCAGTCTCAGGCTAGGGGAGTATaGCTTCACTGGAAAACATCAGCAGGGACCCTTTGTGCTACTGGA	+
Preference number: 6 (lower is better) Translates to: SLTSEGTYQSQARGV*LHWKTSAGTLCATG Trigger: TCCAGTAGCACAAAGGGTCCCTGCTGATGTTTTCCAGTGAAGCAATACTCCCCTAGCCTGAGACTGATAAGTGCCTTCAGAAGTTAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446520.2
CDS CCA 72 bp	ACTTATCAGTCTCAGGCTAGGGGAGTATTGCTTCACTaGAAAACATCAGCAGGGACCCTTTGTGCTACTGGA	+
Preference number: 6 (lower is better) Translates to: TYQSQARGVLLH*KTSAGTLCATG Trigger: TCCAGTAGCACAAAGGGTCCCTGCTGATGTTTTCCAGTGAAGCAATACTCCCCTAGCCTGAGACTGATAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446520.2
CDS TCA 72 bp	ATCCACGCATTGAATTTTGGTTTAGGGGTCTCTGGTTaGGCAGAGGGTTGCTTGAGTGAGTTTAGAAGGTGG	+
Preference number: 6 (lower is better) Translates to: IHALNFGLGVSG*AEGCLSEFRRW Trigger: CCACCTTCTAAACTCACTCAAGCAACCCTCTGCTCAACCAGAGACCCCTAAACCAAAATTCAATGCGTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446520.2
CDS TCA 72 bp	TTCATAATGATGCTGGGAGGTAAAACCCATCATTACTaGAAGCACCCTTTGCACATATTGTTCTATCCACGC	+
Preference number: 6 (lower is better) Translates to: FIMMLGGKTHHY*KHPLHILFYPR Trigger: GCGTGGATAGAACAATATGTGCAAAGGGTGCTTTCAGTAATGATGGGTTTTACCTCCCAGCATCATTATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446520.2
CDS GCA 72 bp	GCAGTTTCAAGGTTATCAAGTGATGGAAAATCCTACTaGTTACTTCAAGGTGTAACATATACAACTGTGCTG	+
Preference number: 6 (lower is better) Translates to: AVSRLSSDGKSY*LLQGVTYTTVL Trigger: CAGCACAGTTGTATATGTTACACCTTGAAGTAAGCAGTAGGATTTTCCATCACTTGATAACCTTGAAACTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446520.2
CDS CAA 72 bp	ACTTGTAATGTCTACCTTAGTTTCCTGTTAGAAAGCTaGTCAATACACCAGTGCCTCAAATCCATTTTCTCA	+
Preference number: 6 (lower is better) Translates to: TCNVYLSFLLES*SIHQCLKSIFS Trigger: TGAGAAAATGGATTTGAGGCACTGGTGTATTGACAAGCTTTCTAACAGGAAACTAAGGTAGACATTACAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446520.2