Pregenerated sensors for LINC01823 (Homo sapiens)
Ensembl gene IDs: ENSG00000224655Ensembl transcript IDs: ENST00000422238.6, ENST00000422649.2, ENST00000435895.5, ENST00000438722.6, ENST00000651479.1, ENST00000654341.1, ENST00000654583.1, ENST00000654814.1, ENST00000656779.1, ENST00000657005.1, ENST00000657823.1, ENST00000659754.1, ENST00000661690.1, ENST00000663836.1, ENST00000664416.1, ENST00000664529.1, ENST00000668260.1
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGCTGCTGCTGGCCCTGTGCCTCTGTCCAGGTAGCCTCTCCACATaGCTGGTTTGGTTTCCACACGGCATGTCTGTCATCAATGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: QLLLALCLCPGSLST*LVWFPHGMSVINGR Trigger: TCTACCATTGATGACAGACATGCCGTGTGGAAACCAAACCAGCCATGTGGAGAGGCTACCTGGACAGAGGCACAGGGCCAGCAGCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000656779.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000664529.1 ENST00000668260.1 |
||
| CDS CCA 90 bp | CTGGCCCTGTGCCTCTGTCCAGGTAGCCTCTCCACATGGCTGGTTTaGTTTCCACACGGCATGTCTGTCATCAATGGTAGATGGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LALCLCPGSLSTWLV*FPHGMSVINGRWLL Trigger: GAGAAGCCATCTACCATTGATGACAGACATGCCGTGTGGAAACCAAACCAGCCATGTGGAGAGGCTACCTGGACAGAGGCACAGGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000656779.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000664529.1 ENST00000668260.1 |
||
| CDS TCA 90 bp | CTTGTGTCACTGGGAGTAGGGGGTCTGTATCACCAGAAAGTGGGGTaGGTATCTCAAATCCTGCTCACCAAGCTGTGTGCTGGACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVSLGVGGLYHQKVG*VSQILLTKLCAGQP Trigger: GGGCTGTCCAGCACACAGCTTGGTGAGCAGGATTTGAGATACTCACCCCACTTTCTGGTGATACAGACCCCCTACTCCCAGTGACACAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000422238.6 |
||
| CDS TCA 90 bp | CCAGGAATGCGCAGCTCCTGCGTTTTTCCAGGGGTGGGTAAATGCTaGTTCAGTCTACATTTCTTGAGGAAGACTGGAGGGCTGTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PGMRSSCVFPGVGKC*FSLHFLRKTGGLFP Trigger: CGGAAACAGCCCTCCAGTCTTCCTCAAGAAATGTAGACTGAATCAGCATTTACCCACCCCTGGAAAAACGCAGGAGCTGCGCATTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 17 transcripts: ENST00000422238.6 ENST00000422649.2 ENST00000435895.5 ENST00000438722.6 ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000656779.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000664529.1 ENST00000668260.1 |
||
| CDS TCA 90 bp | AGCCCAGACTGGTTGTTGGATGAATGTCTGGACATTCCTGGATGCTaGGAAGAGGACATTCAAGGCCAGGAAGACTCCGATAAGCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPDWLLDECLDIPGC*EEDIQGQEDSDKRA Trigger: TGCCCGCTTATCGGAGTCTTCCTGGCCTTGAATGTCCTCTTCTCAGCATCCAGGAATGTCCAGACATTCATCCAACAACCAGTCTGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438722.6 |
||
| CDS GCA 90 bp | GCCACTGTCACCATCCCCAAGGTCACCATGATACTTCTATGTGACTaGCCTGACCTACGTCTTGAAAGAAGCTGGTCAACTCAGGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: ATVTIPKVTMILLCD*PDLRLERSWSTQDL Trigger: GAGGTCCTGAGTTGACCAGCTTCTTTCAAGACGTAGGTCAGGGCAGTCACATAGAAGTATCATGGTGACCTTGGGGATGGTGACAGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435895.5 |
||
| CDS GCA 90 bp | GGCAACAGAAGGAATAGCCTTGCCACCACCTTGATCCTAGACACCTaGCTCCAGAACTGTCATCTTCAGATACTCTCCAGCCATCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GNRRNSLATTLILDT*LQNCHLQILSSHHR Trigger: CCTGTGATGGCTGGAGAGTATCTGAAGATGACAGTTCTGGAGGCAGGTGTCTAGGATCAAGGTGGTGGCAAGGCTATTCCTTCTGTTGCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664529.1 |
||
| CDS CCA 90 bp | CGGCGGAATCCAAGAAGCCCCATGGATGCCATATGGGGGAACCTCTaGATATCAAGGCCACACCTTCTTCACTCCACAAAGATACACACA | + |
|
Preference number: 5 (lower is better) Translates to: RRNPRSPMDAIWGNL*ISRPHLLHSTKIHT Trigger: TGTGTGTATCTTTGTGGAGTGAAGAAGGTGTGGCCTTGATATCCAGAGGTTCCCCCATATGGCATCCATGGGGCTTCTTGGATTCCGCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651479.1 |
||
| CDS GCA 90 bp | GAAGAGGACATTCAAGGCCAGGAAGACTCCGATAAGCGGGCACATTaGAACCATGAGCTCCAACATGACCGGTGTCTTCATAAGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EEDIQGQEDSDKRAH*NHELQHDRCLHKKR Trigger: CCTCTTCTTATGAAGACACCGGTCATGTTGGAGCTCATGGTTGCAATGTGCCCGCTTATCGGAGTCTTCCTGGCCTTGAATGTCCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438722.6 |
||
| CDS CCA 90 bp | AAAGCTGGCCCCATAAAGAATGGGAGTAAAGCAGTAAATCAGCCGTaGGTCCAACCATCTTGTGTCACTGGGAGTAGGGGGTCTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KAGPIKNGSKAVNQP*VQPSCVTGSRGSVI Trigger: GATGACAGACCCCCTACTCCCAGTGACACAAGATGGTTGGACCCACGGCTGATTTACTGCTTTACTCCCATTCTTTATGGGGCCAGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000422649.2 |
||
| CDS CCA 90 bp | TCTCAACCTCTTCTCCATCCTGCTCCCATTGAAACTCGACTCTGCTaGGTTCTTGCTAGGTTCCAGGGATTAGGATGTGAACCTCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SQPLLHPAPIETRLC*VLARFQGLGCEPRW Trigger: CCAACGAGGTTCACATCCTAATCCCTGGAACCTAGCAAGAACCCAGCAGAGTCGAGTTTCAATGGGAGCAGGATGGAGAAGAGGTTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651479.1 |
||
| CDS CCA 90 bp | TCTGAAATACAACGGCGGAATCCAAGAAGCCCCATGGATGCCATATaGGGGAACCTCTGGATATCAAGGCCACACCTTCTTCACTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SEIQRRNPRSPMDAI*GNLWISRPHLLHST Trigger: TGTGGAGTGAAGAAGGTGTGGCCTTGATATCCAGAGGTTCCCCCATATGGCATCCATGGGGCTTCTTGGATTCCGCCGTTGTATTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651479.1 |
||
| CDS CCA 90 bp | ACTGATGAGCTTCTGAAATACAACGGCGGAATCCAAGAAGCCCCATaGATGCCATATGGGGGAACCTCTGGATATCAAGGCCACACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TDELLKYNGGIQEAP*MPYGGTSGYQGHTF Trigger: GAAGGTGTGGCCTTGATATCCAGAGGTTCCCCCATATGGCATCCATGGGGCTTCTTGGATTCCGCCGTTGTATTTCAGAAGCTCATCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651479.1 |
||
| CDS CCA 90 bp | TGGCTGGTTTGGTTTCCACACGGCATGTCTGTCATCAATGGTAGATaGCTTCTCCCAAAAGCTGCAACCTCAGAAGCCGTGCACTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WLVWFPHGMSVINGR*LLPKAATSEAVHSL Trigger: AAGAGAGTGCACGGCTTCTGAGGTTGCAGCTTTTGGGAGAAGCCATCTACCATTGATGACAGACATGCCGTGTGGAAACCAAACCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000656779.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000664529.1 ENST00000668260.1 |
||
| CDS CCA 90 bp | GCAATTGTAATGCTAAGGGTTGCTTCCTCCAACACAACCTGCTCTTaGTGTTTACATTTCCCTGGGGATGGCTTCCCACTCTCCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AIVMLRVASSNTTCS*CLHFPGDGFPLSAA Trigger: AGCTGCGGAGAGTGGGAAGCCATCCCCAGGGAAATGTAAACACCAAGAGCAGGTTGTGTTGGAGGAAGCAACCCTTAGCATTACAATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668260.1 |
||
| CDS TCA 90 bp | CAGCCCTGGTTAGTGTTTAATCAGGGGAGATGGGTTGGAGCACTCTaGAGCAGCAGTGTGTCTCACATAAGAATCTTTGTGGCTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QPWLVFNQGRWVGAL*SSSVSHIRIFVAAQ Trigger: CTGTGCAGCCACAAAGATTCTTATGTGAGACACACTGCTGCTTCAGAGTGCTCCAACCCATCTCCCCTGATTAAACACTAACCAGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000438722.6 ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000668260.1 |
||
| CDS CCA 90 bp | AAAGCTGGCCCCATAAAGAATGGGAGTAAAGCAGTAAATCAGCCGTaGGTCCAACCATCTTGTGTCACTGGGAGTAGGGGGTCTGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: KAGPIKNGSKAVNQP*VQPSCVTGSRGSVS Trigger: TGATACAGACCCCCTACTCCCAGTGACACAAGATGGTTGGACCCACGGCTGATTTACTGCTTTACTCCCATTCTTTATGGGGCCAGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000422238.6 |
||
| CDS CCA 90 bp | GCCCTGACCTACGTCTTGAAAGAAGCTGGTCAACTCAGGACCTCATaGAACATATTTGTAGCTCCTGTCACACGGGCACATGAATTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ALTYVLKEAGQLRTS*NIFVAPVTRAHELV Trigger: GACTAATTCATGTGCCCGTGTGACAGGAGCTACAAATATGTTCCATGAGGTCCTGAGTTGACCAGCTTCTTTCAAGACGTAGGTCAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435895.5 |
||
| CDS CCA 90 bp | TGCTGGGTTCTTGCTAGGTTCCAGGGATTAGGATGTGAACCTCGTTaGGGAGCTATTATTCAGCCCAACATGACCGGTGTCTTCATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CWVLARFQGLGCEPR*GAIIQPNMTGVFIR Trigger: TCTTATGAAGACACCGGTCATGTTGGGCTGAATAATAGCTCCCCAACGAGGTTCACATCCTAATCCCTGGAACCTAGCAAGAACCCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651479.1 |
||
| CDS GCA 90 bp | TCAATGGTAGATGGCTTCTCCCAAAAGCTGCAACCTCAGAAGCCGTaGACTCTCTTCTGTTGCATTCTGTCATCTTCAGATACTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SMVDGFSQKLQPQKP*TLFCCILSSSDTLQ Trigger: CTGGAGAGTATCTGAAGATGACAGAATGCAACAGAAGAGAGTGCACGGCTTCTGAGGTTGCAGCTTTTGGGAGAAGCCATCTACCATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656779.1 |
||
| CDS CCA 90 bp | CTTACTGGTTTTGCTTCGGGGCCTCCTCTCACATTGGATAGTCAATaGGTGGTGGTGTGGTTGTCAATGAACGTGCATTATTATCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTGFASGPPLTLDSQ*VVVWLSMNVHYYRS Trigger: TGACCGATAATAATGCACGTTCATTGACAACCACACCACCACCCATTGACTATCCAATGTGAGAGGAGGCCCCGAAGCAAAACCAGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661690.1 |
||
| CDS CCA 90 bp | GGCATGTATTATTTTTCTATCCTGCTCTTGGTGTTTACATTTCCCTaGGGATGGCTTCCCACTCTCCGCAGCTTCAGAATCACTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GMYYFSILLLVFTFP*GWLPTLRSFRITVF Trigger: GAACACAGTGATTCTGAAGCTGCGGAGAGTGGGAAGCCATCCCCAGGGAAATGTAAACACCAAGAGCAGGATAGAAAAATAATACATGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435895.5 |
||
| CDS CCA 90 bp | GCAGTCCAAAGGTGGCTGAAATCGGAGTCATCTGAAGGCTCAACTTaGCTGTACATCAAAGATGATTTCTTTGCTCACATGTCTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVQRWLKSESSEGST*LYIKDDFFAHMSVS Trigger: GGAGACAGACATGTGAGCAAAGAAATCATCTTTGATGTACAGCCAAGTTGAGCCTTCAGATGACTCCGATTTCAGCCACCTTTGGACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000656779.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000664529.1 ENST00000668260.1 |
||
| CDS TCA 90 bp | CATCTCAGAACTAGCTTTGTACAGCTTCTTCAACTGATGAGCTTCTaGAATACAACGGCGGAATCCAAGAAGCCCCATGGATGCCATATG | + |
|
Preference number: 5 (lower is better) Translates to: HLRTSFVQLLQLMSF*NTTAESKKPHGCHM Trigger: CATATGGCATCCATGGGGCTTCTTGGATTCCGCCGTTGTATTTCAGAAGCTCATCAGTTGAAGAAGCTGTACAAAGCTAGTTCTGAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651479.1 |
||
| CDS TCA 90 bp | CTCCTCTCACATTGGATAGTCAATGGGTGGTGGTGTGGTTGTCAATaGACGTGCATTATTATCGGTCAGAACCCCAAAAGGAAATCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLSHWIVNGWWCGCQ*TCIIIGQNPKRKSV Trigger: CACTGATTTCCTTTTGGGGTTCTGACCGATAATAATGCACGTTCATTGACAACCACACCACCACCCATTGACTATCCAATGTGAGAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661690.1 |
||
| CDS CCA 90 bp | ATGATACTTCTATGTGACTGCCCTGACCTACGTCTTGAAAGAAGCTaGTCAACTCAGGACCTCATGGAACATATTTGTAGCTCCTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: MILLCDCPDLRLERS*STQDLMEHICSSCH Trigger: GTGACAGGAGCTACAAATATGTTCCATGAGGTCCTGAGTTGACCAGCTTCTTTCAAGACGTAGGTCAGGGCAGTCACATAGAAGTATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435895.5 |
||
| CDS CCA 90 bp | TTAATAACAGTTATTCACAGTGCAGGAGTCAAAGGCATTTCTGCTTaGGTGCTCATTAAAGCTGGCCCCATAAAGAATGGGAGTAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LITVIHSAGVKGISA*VLIKAGPIKNGSKA Trigger: TGCTTTACTCCCATTCTTTATGGGGCCAGCTTTAATGAGCACCCAAGCAGAAATGCCTTTGACTCCTGCACTGTGAATAACTGTTATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000422238.6 ENST00000422649.2 |
||
| CDS GCA 90 bp | TTATTTTTCTATCCAAGTACTTTCTGCAATTGTAATGCTAAGGGTTaGTTCCTCCAACACAACCTGCTCTTGGTGTTTACATTTCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LFFYPSTFCNCNAKG*FLQHNLLLVFTFPW Trigger: CCAGGGAAATGTAAACACCAAGAGCAGGTTGTGTTGGAGGAAGCAACCCTTAGCATTACAATTGCAGAAAGTACTTGGATAGAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668260.1 |
||
| CDS CCA 72 bp | CTGGCCCTGTGCCTCTGTCCAGGTAGCCTCTCCACATaGCTGGTTTGGTTTCCACACGGCATGTCTGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LALCLCPGSLST*LVWFPHGMSVI Trigger: GATGACAGACATGCCGTGTGGAAACCAAACCAGCCATGTGGAGAGGCTACCTGGACAGAGGCACAGGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000656779.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000664529.1 ENST00000668260.1 |
||
| CDS GCA 72 bp | GCTGAGATCGTGCTTCTTCTATTGAGGCTTCTAAGATaGCCAAAGCCCGTGGCCCCCAGTGTTCTCCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: AEIVLLLLRLLR*PKPVAPSVLPT Trigger: TGTTGGGAGAACACTGGGGGCCACGGGCTTTGGGCATCTTAGAAGCCTCAATAGAAGAAGCACGATCTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664416.1 |
||
| CDS TCA 72 bp | CTGGGAGTAGGGGGTCTGTATCACCAGAAAGTGGGGTaGGTATCTCAAATCCTGCTCACCAAGCTGTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGVGGLYHQKVG*VSQILLTKLCA Trigger: AGCACACAGCTTGGTGAGCAGGATTTGAGATACTCACCCCACTTTCTGGTGATACAGACCCCCTACTCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000422238.6 |
||
| CDS CCA 72 bp | GAAGCAAGGACACTGACATGCACAGAGGAGAGATCTTaGAAAGACGCGGAGAAGACGGTCATCCACAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: EARTLTCTEERS*KDAEKTVIHKA Trigger: TGCCTTGTGGATGACCGTCTTCTCCGCGTCTTTCCAAGATCTCTCCTCTGTGCATGTCAGTGTCCTTGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000438722.6 ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000664529.1 ENST00000668260.1 |
||
| CDS CCA 72 bp | CCAAGAAGCCCCATGGATGCCATATGGGGGAACCTCTaGATATCAAGGCCACACCTTCTTCACTCCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PRSPMDAIWGNL*ISRPHLLHSTK Trigger: CTTTGTGGAGTGAAGAAGGTGTGGCCTTGATATCCAGAGGTTCCCCCATATGGCATCCATGGGGCTTCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651479.1 |
||
| CDS CCA 72 bp | TGCCTCTGTCCAGGTAGCCTCTCCACATGGCTGGTTTaGTTTCCACACGGCATGTCTGTCATCAATGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: CLCPGSLSTWLV*FPHGMSVINGR Trigger: TCTACCATTGATGACAGACATGCCGTGTGGAAACCAAACCAGCCATGTGGAGAGGCTACCTGGACAGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000656779.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000664529.1 ENST00000668260.1 |
||
| CDS CAA 90 bp | CAAGGCAAGGAGGGAGGCAACAGAAGGAATAGCCTTGCCACCACCTaGATCCTAGACACCTGCCTCCAGAACTGTCATCTTCAGATACTC | + |
|
Preference number: 6 (lower is better) Translates to: QGKEGGNRRNSLATT*ILDTCLQNCHLQIL Trigger: GAGTATCTGAAGATGACAGTTCTGGAGGCAGGTGTCTAGGATCAAGGTGGTGGCAAGGCTATTCCTTCTGTTGCCTCCCTCCTTGCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664529.1 |
||
| CDS CAA 90 bp | CTTCTCCCAAAAGCTGCAACCTCAGAAGCCGTGCACTCTCTTCTGTaGCATTCTGTCATCTTCAGATACTCTCCAGCCATCACAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLPKAATSEAVHSLL*HSVIFRYSPAITGG Trigger: GCCACCTGTGATGGCTGGAGAGTATCTGAAGATGACAGAATGCAACAGAAGAGAGTGCACGGCTTCTGAGGTTGCAGCTTTTGGGAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656779.1 |
||
| CDS CAA 90 bp | TGCAATTGTAATGCTAAGGGTTGCTTCCTCCAACACAACCTGCTCTaGGTGTTTACATTTCCCTGGGGATGGCTTCCCACTCTCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CNCNAKGCFLQHNLL*VFTFPWGWLPTLRS Trigger: GCTGCGGAGAGTGGGAAGCCATCCCCAGGGAAATGTAAACACCAAGAGCAGGTTGTGTTGGAGGAAGCAACCCTTAGCATTACAATTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668260.1 |
||
| CDS GCA 72 bp | ATTCAAGGCCAGGAAGACTCCGATAAGCGGGCACATTaGAACCATGAGCTCCAACATGACCGGTGTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: IQGQEDSDKRAH*NHELQHDRCLH Trigger: ATGAAGACACCGGTCATGTTGGAGCTCATGGTTGCAATGTGCCCGCTTATCGGAGTCTTCCTGGCCTTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438722.6 |
||
| CDS GCA 72 bp | CCTCTTCTCCATCCTGCTCCCATTGAAACTCGACTCTaGTGGGTTCTTGCTAGGTTCCAGGGATTAGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: PLLHPAPIETRL*WVLARFQGLGC Trigger: ACATCCTAATCCCTGGAACCTAGCAAGAACCCAGCAGAGTCGAGTTTCAATGGGAGCAGGATGGAGAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651479.1 |
||
| CDS CCA 72 bp | CCCATAAAGAATGGGAGTAAAGCAGTAAATCAGCCGTaGGTCCAACCATCTTGTGTCACTGGGAGTAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PIKNGSKAVNQP*VQPSCVTGSRG Trigger: CCCCCTACTCCCAGTGACACAAGATGGTTGGACCCACGGCTGATTTACTGCTTTACTCCCATTCTTTATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000422238.6 ENST00000422649.2 |
||
| CDS CCA 72 bp | CTTCTGAAATACAACGGCGGAATCCAAGAAGCCCCATaGATGCCATATGGGGGAACCTCTGGATATCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLKYNGGIQEAP*MPYGGTSGYQG Trigger: GCCTTGATATCCAGAGGTTCCCCCATATGGCATCCATGGGGCTTCTTGGATTCCGCCGTTGTATTTCAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651479.1 |
||
| CDS CCA 72 bp | TGGTTTCCACACGGCATGTCTGTCATCAATGGTAGATaGCTTCTCCCAAAAGCTGCAACCTCAGAAGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: WFPHGMSVINGR*LLPKAATSEAV Trigger: CACGGCTTCTGAGGTTGCAGCTTTTGGGAGAAGCCATCTACCATTGATGACAGACATGCCGTGTGGAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000656779.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000664529.1 ENST00000668260.1 |
||
| CDS CAA 72 bp | CCTCTTACTGGTTTTGCTTCGGGGCCTCCTCTCACATaGGATAGTCAATGGGTGGTGGTGTGGTTGTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: PLTGFASGPPLT*DSQWVVVWLSM Trigger: CATTGACAACCACACCACCACCCATTGACTATCCAATGTGAGAGGAGGCCCCGAAGCAAAACCAGTAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661690.1 |
||
| CDS CAA 90 bp | CAAGGCAAGGAGGGAGGCAACAGAAGGAATAGCCTTGCCACCACCTaGATCCTAGACACCTGCCTCCAGAACTATGAGAAAGTAAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: QGKEGGNRRNSLATT*ILDTCLQNYEKVNL Trigger: CAGATTTACTTTCTCATAGTTCTGGAGGCAGGTGTCTAGGATCAAGGTGGTGGCAAGGCTATTCCTTCTGTTGCCTCCCTCCTTGCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000438722.6 ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000668260.1 |
||
| CDS TCA 72 bp | CAAGAAACACAAAGCTTCAGAATCTCCCTCTCACCCTaGGTGTGGGTGGAACCCAGAGCGATGACAATGCTA | + |
|
Preference number: 6 (lower is better) Translates to: QETQSFRISLSP*VWVEPRAMTML Trigger: TAGCATTGTCATCGCTCTGGGTTCCACCCACACTCAGGGTGAGAGGGAGATTCTGAAGCTTTGTGTTTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659754.1 |
||
| CDS CCA 72 bp | CTTCTCCATCCTGCTCCCATTGAAACTCGACTCTGCTaGGTTCTTGCTAGGTTCCAGGGATTAGGATGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLHPAPIETRLC*VLARFQGLGCE Trigger: TTCACATCCTAATCCCTGGAACCTAGCAAGAACCCAGCAGAGTCGAGTTTCAATGGGAGCAGGATGGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651479.1 |
||
| CDS CAA 90 bp | CTTCTCCCAAAAGCTGCAACCTCAGAAGCCGTGCACTCTCTTCTGTaGCATTCCAACATGACCGGTGTCTTCATAAGAAGAGGAAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLPKAATSEAVHSLL*HSNMTGVFIRRGSK Trigger: CTTGCTTCCTCTTCTTATGAAGACACCGGTCATGTTGGAATGCAACAGAAGAGAGTGCACGGCTTCTGAGGTTGCAGCTTTTGGGAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664529.1 ENST00000668260.1 |
||
| CDS TCA 72 bp | TGGTTGTTGGATGAATGTCTGGACATTCCTGGATGCTaGGAAGAGGACATTCAAGGCCAGGAAGACTCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: WLLDECLDIPGC*EEDIQGQEDSD Trigger: ATCGGAGTCTTCCTGGCCTTGAATGTCCTCTTCTCAGCATCCAGGAATGTCCAGACATTCATCCAACAACCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438722.6 |
||
| CDS GCA 72 bp | ACCATCCCCAAGGTCACCATGATACTTCTATGTGACTaGCCTGACCTACGTCTTGAAAGAAGCTGGTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: TIPKVTMILLCD*PDLRLERSWST Trigger: AGTTGACCAGCTTCTTTCAAGACGTAGGTCAGGGCAGTCACATAGAAGTATCATGGTGACCTTGGGGATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435895.5 |
||
| CDS GCA 72 bp | GATGGCTTCTCCCAAAAGCTGCAACCTCAGAAGCCGTaGACTCTCTTCTGTTGCATTCTGTCATCTTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: DGFSQKLQPQKP*TLFCCILSSSD Trigger: ATCTGAAGATGACAGAATGCAACAGAAGAGAGTGCACGGCTTCTGAGGTTGCAGCTTTTGGGAGAAGCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656779.1 |
||
| CDS CCA 72 bp | TTTGCTTCGGGGCCTCCTCTCACATTGGATAGTCAATaGGTGGTGGTGTGGTTGTCAATGAACGTGCATTAT | + |
|
Preference number: 6 (lower is better) Translates to: FASGPPLTLDSQ*VVVWLSMNVHY Trigger: ATAATGCACGTTCATTGACAACCACACCACCACCCATTGACTATCCAATGTGAGAGGAGGCCCCGAAGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661690.1 |
||
| CDS CAA 72 bp | AAGGCTCAACTTGGCTGTACATCAAAGATGATTTCTTaGCTCACATGTCTGTCTCCACAGCTGCTGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KAQLGCTSKMIS*LTCLSPQLLLA Trigger: GGCCAGCAGCAGCTGTGGAGACAGACATGTGAGCAAAGAAATCATCTTTGATGTACAGCCAAGTTGAGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000656779.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000664529.1 ENST00000668260.1 |
||
| CDS CAA 72 bp | AAAGCTGCAACCTCAGAAGCCGTGCACTCTCTTCTGTaGCATTCTGTCATCTTCAGATACTCTCCAGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: KAATSEAVHSLL*HSVIFRYSPAI Trigger: GATGGCTGGAGAGTATCTGAAGATGACAGAATGCAACAGAAGAGAGTGCACGGCTTCTGAGGTTGCAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656779.1 |
||
| CDS TCA 72 bp | TTAGAGTCTTTCATGTGGTTGCAGTCCAAAGGTGGCTaGAATCGGAGTCATCTGAAGGCTCAACTTGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LESFMWLQSKGG*NRSHLKAQLGC Trigger: ACAGCCAAGTTGAGCCTTCAGATGACTCCGATTTCAGCCACCTTTGGACTGCAACCACATGAAAGACTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000656779.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000664529.1 ENST00000668260.1 |
||
| CDS CCA 72 bp | TACGTCTTGAAAGAAGCTGGTCAACTCAGGACCTCATaGAACATATTTGTAGCTCCTGTCACACGGGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: YVLKEAGQLRTS*NIFVAPVTRAH Trigger: ATGTGCCCGTGTGACAGGAGCTACAAATATGTTCCATGAGGTCCTGAGTTGACCAGCTTCTTTCAAGACGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435895.5 |
||
| CDS CCA 72 bp | TATTTTTCTATCCTGCTCTTGGTGTTTACATTTCCCTaGGGATGGCTTCCCACTCTCCGCAGCTTCAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: YFSILLLVFTFP*GWLPTLRSFRI Trigger: GATTCTGAAGCTGCGGAGAGTGGGAAGCCATCCCCAGGGAAATGTAAACACCAAGAGCAGGATAGAAAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435895.5 |
||
| CDS CAA 72 bp | CACAAGCTAAGGACACTGGCATTTATCTCCCTCCATTaGAAGCTTCCGGAGGGCATGGATTTTGTGTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: HKLRTLAFISLH*KLPEGMDFVCV Trigger: AACACACACAAAATCCATGCCCTCCGGAAGCTTCAAATGGAGGGAGATAAATGCCAGTGTCCTTAGCTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654583.1 |
||
| CDS CAA 72 bp | AAAGCTGCAACCTCAGAAGCCGTGCACTCTCTTCTGTaGCATTCCAACATGACCGGTGTCTTCATAAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: KAATSEAVHSLL*HSNMTGVFIRR Trigger: TCTTCTTATGAAGACACCGGTCATGTTGGAATGCAACAGAAGAGAGTGCACGGCTTCTGAGGTTGCAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664529.1 ENST00000668260.1 |
||
| CDS CAA 72 bp | CCTCTCACATTGGATAGTCAATGGGTGGTGGTGTGGTaGTCAATGAACGTGCATTATTATCGGTCAGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: PLTLDSQWVVVW*SMNVHYYRSEP Trigger: GGGTTCTGACCGATAATAATGCACGTTCATTGACAACCACACCACCACCCATTGACTATCCAATGTGAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661690.1 |
||
| CDS TCA 72 bp | CTACATTTCTTGAGGAAGACTGGAGGGCTGTTTCCGTaGCCTGTCTCAGGGCTGAATTTGTTCCTCAAATTT | + |
|
Preference number: 6 (lower is better) Translates to: LHFLRKTGGLFP*PVSGLNLFLKF Trigger: AAATTTGAGGAACAAATTCAGCCCTGAGACAGGTCACGGAAACAGCCCTCCAGTCTTCCTCAAGAAATGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000422238.6 ENST00000422649.2 ENST00000435895.5 ENST00000438722.6 ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000656779.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000664529.1 ENST00000668260.1 |
||
| CDS TCA 72 bp | ACTAGCTTTGTACAGCTTCTTCAACTGATGAGCTTCTaGAATACAACGGCGGAATCCAAGAAGCCCCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: TSFVQLLQLMSF*NTTAESKKPHG Trigger: TCCATGGGGCTTCTTGGATTCCGCCGTTGTATTTCAGAAGCTCATCAGTTGAAGAAGCTGTACAAAGCTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651479.1 |
||
| CDS TCA 72 bp | CATTGGATAGTCAATGGGTGGTGGTGTGGTTGTCAATaGACGTGCATTATTATCGGTCAGAACCCCAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: HWIVNGWWCGCQ*TCIIIGQNPKR Trigger: CCTTTTGGGGTTCTGACCGATAATAATGCACGTTCATTGACAACCACACCACCACCCATTGACTATCCAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661690.1 |
||
| CDS CCA 72 bp | CCTCCTCTCACATTGGATAGTCAATGGGTGGTGGTGTaGTTGTCAATGAACGTGCATTATTATCGGTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PPLTLDSQWVVV*LSMNVHYYRSE Trigger: TTCTGACCGATAATAATGCACGTTCATTGACAACCACACCACCACCCATTGACTATCCAATGTGAGAGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661690.1 |
||
| CDS TCA 72 bp | TTAGTGTTTAATCAGGGGAGATGGGTTGGAGCACTCTaGAGCAGCAGTGTGTCTCACATAAGAATCTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVFNQGRWVGAL*SSSVSHIRIFV Trigger: CACAAAGATTCTTATGTGAGACACACTGCTGCTTCAGAGTGCTCCAACCCATCTCCCCTGATTAAACACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000438722.6 ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000668260.1 |
||
| CDS GCA 72 bp | AGAGATCACCAGAGGATCATTGACCCAAAACATACATaGATCATAGAAGATGGGAGGAGAAAAACTGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RDHQRIIDPKHT*IIEDGRRKTGP Trigger: TGGGCCAGTTTTTCTCCTCCCATCTTCTATGATGCATGTATGTTTTGGGTCAATGATCCTCTGGTGATCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657005.1 |
||
| CDS CCA 72 bp | AGGTGGCTGAAATCGGAGTCATCTGAAGGCTCAACTTaGCTGTACATCAAAGATGATTTCTTTGCTCACATG | + |
|
Preference number: 6 (lower is better) Translates to: RWLKSESSEGST*LYIKDDFFAHM Trigger: CATGTGAGCAAAGAAATCATCTTTGATGTACAGCCAAGTTGAGCCTTCAGATGACTCCGATTTCAGCCACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000651479.1 ENST00000654341.1 ENST00000654583.1 ENST00000654814.1 ENST00000656779.1 ENST00000657005.1 ENST00000657823.1 ENST00000659754.1 ENST00000661690.1 ENST00000663836.1 ENST00000664416.1 ENST00000664529.1 ENST00000668260.1 |
||
| CDS CAA 90 bp | TCCCATCATCATCTCCTATTTGTTAACTCAATTAAGGTCTATGTGTaGAGTGCTAACTACACACCAGGCACCATGCCTGACTCATTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SHHHLLFVNSIKVYV*SANYTPGTMPDSLA Trigger: GGCTAATGAGTCAGGCATGGTGCCTGGTGTGTAGTTAGCACTCAACACATAGACCTTAATTGAGTTAACAAATAGGAGATGATGATGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438722.6 |
||
| CDS GCA 72 bp | GCAGCTTGCCCTTTTATTAATAACAGTTATTCACAGTaGAGGAGTCAAAGGCATTTCTGCTTGGGTGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: AACPFINNSYSQ*RSQRHFCLGAH Trigger: ATGAGCACCCAAGCAGAAATGCCTTTGACTCCTGCACTGTGAATAACTGTTATTAATAAAAGGGCAAGCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000422238.6 ENST00000422649.2 |
||
| CDS CAA 72 bp | CATCTCCTATTTGTTAACTCAATTAAGGTCTATGTGTaGAGTGCTAACTACACACCAGGCACCATGCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: HLLFVNSIKVYV*SANYTPGTMPD Trigger: GTCAGGCATGGTGCCTGGTGTGTAGTTAGCACTCAACACATAGACCTTAATTGAGTTAACAAATAGGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438722.6 |
||
| CDS TCA 72 bp | ATCTCCTATTTGTTAACTCAATTAAGGTCTATGTGTTaGGTGCTAACTACACACCAGGCACCATGCCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: ISYLLTQLRSMC*VLTTHQAPCLT Trigger: AGTCAGGCATGGTGCCTGGTGTGTAGTTAGCACTCAACACATAGACCTTAATTGAGTTAACAAATAGGAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438722.6 |
||
| CDS GCA 72 bp | TATCCAAGTACTTTCTGCAATTGTAATGCTAAGGGTTaGTTCCTCCAACACAACCTGCTCTTGGTGTTTACA | + |
|
Preference number: 6 (lower is better) Translates to: YPSTFCNCNAKG*FLQHNLLLVFT Trigger: TGTAAACACCAAGAGCAGGTTGTGTTGGAGGAAGCAACCCTTAGCATTACAATTGCAGAAAGTACTTGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668260.1 |
||