Pregenerated sensors for LINC01813 (Homo sapiens)

Ensembl gene IDs: ENSG00000229805

Ensembl transcript IDs: ENST00000451034.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TTGTCAAATAGGAGCTTTTACTGGAAAAGCAGTATGTGTTGCTGCTaGGCAATTTCTAGAAGGAGTTTCAAACTTGTTGAGGTAGTTGTT	+
Preference number: 5 (lower is better) Translates to: LSNRSFYWKSSMCCC*AISRRSFKLVEVVV Trigger: AACAACTACCTCAACAAGTTTGAAACTCCTTCTAGAAATTGCTCAGCAGCAACACATACTGCTTTTCCAGTAAAAGCTCCTATTTGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451034.1
CDS TCA 72 bp	AGGAGCTTTTACTGGAAAAGCAGTATGTGTTGCTGCTaGGCAATTTCTAGAAGGAGTTTCAAACTTGTTGAG	+
Preference number: 6 (lower is better) Translates to: RSFYWKSSMCCC*AISRRSFKLVE Trigger: CTCAACAAGTTTGAAACTCCTTCTAGAAATTGCTCAGCAGCAACACATACTGCTTTTCCAGTAAAAGCTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451034.1
CDS CCA 72 bp	ATCTGTCCTCATACAGGTTTCATTATCTTAAGCACTTaGAATGAGACCTCACTTCATCATCGAAGGAGATTC	+
Preference number: 6 (lower is better) Translates to: ICPHTGFIILST*NETSLHHRRRF Trigger: GAATCTCCTTCGATGATGAAGTGAGGTCTCATTCCAAGTGCTTAAGATAATGAAACCTGTATGAGGACAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451034.1
CDS TCA 72 bp	TCCTCATACAGGTTTCATTATCTTAAGCACTTGGAATaGGACCTCACTTCATCATCGAAGGAGATTCAATGT	+
Preference number: 6 (lower is better) Translates to: SSYRFHYLKHLE*DLTSSSKEIQC Trigger: ACATTGAATCTCCTTCGATGATGAAGTGAGGTCTCATTCCAAGTGCTTAAGATAATGAAACCTGTATGAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451034.1

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