Pregenerated sensors for LINC01812 (Homo sapiens)

Ensembl gene IDs: ENSG00000237013

Ensembl transcript IDs: ENST00000457448.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TTTGAGAACCACTGCCCTAGCCTCCTAGAGACTGCCAGGCCTTCCTaGGTTCCTCTTCACCATCTGAACCAAACAGTGGCATTTTTCAAG	+
Preference number: 5 (lower is better) Translates to: FENHCPSLLETARPS*VPLHHLNQTVAFFK Trigger: CTTGAAAAATGCCACTGTTTGGTTCAGATGGTGAAGAGGAACTCAGGAAGGCCTGGCAGTCTCTAGGAGGCTAGGGCAGTGGTTCTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457448.1
CDS TCA 90 bp	GGTCTAGAAGTTAAGAGTTCAAAGAGCATGTTCATTTACCTCATTTaGTATCGCAGTGATTTATTGTACAAAAGGAACTTAAGAGCCCTT	+
Preference number: 5 (lower is better) Translates to: GLEVKSSKSMFIYLI*YRSDLLYKRNLRAL Trigger: AAGGGCTCTTAAGTTCCTTTTGTACAATAAATCACTGCGATATCAAATGAGGTAAATGAACATGCTCTTTGAACTCTTAACTTCTAGACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457448.1
CDS CAA 72 bp	CTGGTCCATGCAAGCAGCATCAGCACCACCGGGGACTaGTTAGAAATGCAGATACTTGAGCTCCATCCCCAG	+
Preference number: 6 (lower is better) Translates to: LVHASSISTTGD*LEMQILELHPQ Trigger: CTGGGGATGGAGCTCAAGTATCTGCATTTCTAACAAGTCCCCGGTGGTGCTGATGCTGCTTGCATGGACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457448.1
CDS CCA 72 bp	CTAACCAAGTGTTTCTCCAAGTATGGTTCTCAAAACTaGTCCATGCAAGCAGCATCAGCACCACCGGGGACT	+
Preference number: 6 (lower is better) Translates to: LTKCFSKYGSQN*SMQAASAPPGT Trigger: AGTCCCCGGTGGTGCTGATGCTGCTTGCATGGACCAGTTTTGAGAACCATACTTGGAGAAACACTTGGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457448.1
CDS TCA 72 bp	GAAATGCAGATACTTGAGCTCCATCCCCAGACCTGCTaGATTAGAAACCCTGGGAGTAGGCCTAGCAATCTT	+
Preference number: 6 (lower is better) Translates to: EMQILELHPQTC*IRNPGSRPSNL Trigger: AAGATTGCTAGGCCTACTCCCAGGGTTTCTAATTCAGCAGGTCTGGGGATGGAGCTCAAGTATCTGCATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457448.1
CDS GCA 72 bp	AGTGTTTCTCCAAGTATGGTTCTCAAAACTGGTCCATaGAAGCAGCATCAGCACCACCGGGGACTTGTTAGA	+
Preference number: 6 (lower is better) Translates to: SVSPSMVLKTGP*KQHQHHRGLVR Trigger: TCTAACAAGTCCCCGGTGGTGCTGATGCTGCTTGCATGGACCAGTTTTGAGAACCATACTTGGAGAAACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457448.1
CDS CAA 72 bp	AATGATCAGACCACTACAGTTAGAACAATGTTTAATTaGGTCACCAGATTCAAATATGCAGAAGTAAGGCCT	+
Preference number: 6 (lower is better) Translates to: NDQTTTVRTMFN*VTRFKYAEVRP Trigger: AGGCCTTACTTCTGCATATTTGAATCTGGTGACCAAATTAAACATTGTTCTAACTGTAGTGGTCTGATCATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457448.1

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