Pregenerated sensors for LINC01804 (Homo sapiens)
Ensembl gene IDs: ENSG00000231031Ensembl transcript IDs: ENST00000436967.4, ENST00000476839.2, ENST00000492352.5
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGGATGGGCCTAGCAGGAGGGGCCTTGGCTTTGTCCAGACAGGGTaGGCACCCAGTGGCAGTGAATCTGGCAGGATGAAGGGAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QDGPSRRGLGFVQTG*APSGSESGRMKGGQ Trigger: CTGGCCTCCCTTCATCCTGCCAGATTCACTGCCACTGGGTGCCCACCCTGTCTGGACAAAGCCAAGGCCCCTCCTGCTAGGCCCATCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS TCA 90 bp | GGGTCAGAACGGACGGAGCTTGGACTAGCAAGCCGGAATGTTCCATaGGGTCCCCTCCTCGCGTTCCTCAAACGCGAGGTGGGGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSERTELGLASRNVP*GPLLAFLKREVGDE Trigger: CTCGTCCCCCACCTCGCGTTTGAGGAACGCGAGGAGGGGACCTCATGGAACATTCCGGCTTGCTAGTCCAAGCTCCGTCCGTTCTGACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS TCA 90 bp | AAGGGAGAGCCCGGAGTCCTAGGGTTGGCGGTGCAGGTCAGGGCCTaGGACCAGGTAAACAGAGGAGGCCAAAGGGCCCTGCCTAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KGEPGVLGLAVQVRA*DQVNRGGQRALPRN Trigger: GTTTCTAGGCAGGGCCCTTTGGCCTCCTCTGTTTACCTGGTCTCAGGCCCTGACCTGCACCGCCAACCCTAGGACTCCGGGCTCTCCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CCA 90 bp | GGAATGTTCCATGAGGTCCCCTCCTCGCGTTCCTCAAACGCGAGGTaGGGGACGAGGAAGTGCAGAGCCCTCCCAAACCACCCTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GMFHEVPSSRSSNAR*GTRKCRALPNHPPV Trigger: AACAGGAGGGTGGTTTGGGAGGGCTCTGCACTTCCTCGTCCCCCACCTCGCGTTTGAGGAACGCGAGGAGGGGACCTCATGGAACATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CCA 90 bp | GCGTGGCAAAGAGATGACTGTTTGGGGGTCAGAACGGACGGAGCTTaGACTAGCAAGCCGGAATGTTCCATGAGGTCCCCTCCTCGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: AWQRDDCLGVRTDGA*TSKPECSMRSPPRV Trigger: AACGCGAGGAGGGGACCTCATGGAACATTCCGGCTTGCTAGTCCAAGCTCCGTCCGTTCTGACCCCCAAACAGTCATCTCTTTGCCACGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CCA 90 bp | AGCATGGCTGGAAAGATCCCTGAGAGCACAGCTCTGCTCCCAGCTTaGGGGAGACCCTGGTTTCTCCACCTGCTGAACTCAGGTGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SMAGKIPESTALLPA*GRPWFLHLLNSGGN Trigger: ATTCCCACCTGAGTTCAGCAGGTGGAGAAACCAGGGTCTCCCCCAAGCTGGGAGCAGAGCTGTGCTCTCAGGGATCTTTCCAGCCATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS TCA 90 bp | CAGTATGGCTCAGAGCTTGCTTCCAGGGTCTATGCTCCTAATGGCTaGTTGGGTCACGGGGTACTCACTCCTAGGTCCAAGGCGTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QYGSELASRVYAPNG*LGHGVLTPRSKAWQ Trigger: TTGCCACGCCTTGGACCTAGGAGTGAGTACCCCGTGACCCAATCAGCCATTAGGAGCATAGACCCTGGAAGCAAGCTCTGAGCCATACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CCA 90 bp | AATTTCAGAAGAAACCCAAACCCACCAGCTATAAGCCAAGGAGCATaGCTGGAAAGATCCCTGAGAGCACAGCTCTGCTCCCAGCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NFRRNPNPPAISQGA*LERSLRAQLCSQLG Trigger: CCCAAGCTGGGAGCAGAGCTGTGCTCTCAGGGATCTTTCCAGCCATGCTCCTTGGCTTATAGCTGGTGGGTTTGGGTTTCTTCTGAAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS TCA 90 bp | CAGACAGAGCTGGGCTTAAAATGCAGGTCTCCTTGGGAATGTCCGTaGAGTCTCCTTTCAAGTACATCCACTGCCTTTCGGGAAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QTELGLKCRSPWECP*SLLSSTSTAFREEE Trigger: CTCTTCTTCCCGAAAGGCAGTGGATGTACTTGAAAGGAGACTTCACGGACATTCCCAAGGAGACCTGCATTTTAAGCCCAGCTCTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436967.4 ENST00000476839.2 ENST00000492352.5 |
||
| CDS CCA 90 bp | CTGGGCCATTCTCTTGTTTGTCTCCCTTGCCAAGCTGTGGGTACCTaGAGGGCAGGGAAGGATGTTTTACTCTTCAATAAATCTGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGHSLVCLPCQAVGT*RAGKDVLLFNKSGA Trigger: AGCTCCAGATTTATTGAAGAGTAAAACATCCTTCCCTGCCCTCCAGGTACCCACAGCTTGGCAAGGGAGACAAACAAGAGAATGGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS TCA 90 bp | CTAACAAATTCCTGCCCAGATGTCCTGTTCTCTGTGAAGCCAGTCTaGACCTCCAGGGTAGAGCAAGTTGCTTTCTCTGGATTTTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LTNSCPDVLFSVKPV*TSRVEQVAFSGFSH Trigger: GTGGGAAAATCCAGAGAAAGCAACTTGCTCTACCCTGGAGGTTCAGACTGGCTTCACAGAGAACAGGACATCTGGGCAGGAATTTGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CCA 90 bp | TCTCTGGATTTTCCCACCCATTTTATAGTTTATCACGCGTTGCCCTaGGCCATTCTCTTGTTTGTCTCCCTTGCCAAGCTGTGGGTACCT | + |
|
Preference number: 5 (lower is better) Translates to: SLDFPTHFIVYHALP*AILLFVSLAKLWVP Trigger: AGGTACCCACAGCTTGGCAAGGGAGACAAACAAGAGAATGGCCCAGGGCAACGCGTGATAAACTATAAAATGGGTGGGAAAATCCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CCA 90 bp | CTGTCCTTAAAAATAATAAGTCCAGAAGTGGGGCAGTTCCAGGGCTaGTTAATTAAGCAGTTTAATGACATCGGCATGGGCCCAGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSLKIISPEVGQFQG*LIKQFNDIGMGPDF Trigger: GAAATCTGGGCCCATGCCGATGTCATTAAACTGCTTAATTAACCAGCCCTGGAACTGCCCCACTTCTGGACTTATTATTTTTAAGGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000436967.4 ENST00000492352.5 |
||
| CDS CAA 90 bp | CTCGCAGCCCCAGGTGGCCACAGGATGGGCCTAGCAGGAGGGGCCTaGGCTTTGTCCAGACAGGGTGGGCACCCAGTGGCAGTGAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: LAAPGGHRMGLAGGA*ALSRQGGHPVAVNL Trigger: CAGATTCACTGCCACTGGGTGCCCACCCTGTCTGGACAAAGCCAAGGCCCCTCCTGCTAGGCCCATCCTGTGGCCACCTGGGGCTGCGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS TCA 72 bp | CCCGGAGTCCTAGGGTTGGCGGTGCAGGTCAGGGCCTaGGACCAGGTAAACAGAGGAGGCCAAAGGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGVLGLAVQVRA*DQVNRGGQRAL Trigger: CAGGGCCCTTTGGCCTCCTCTGTTTACCTGGTCTCAGGCCCTGACCTGCACCGCCAACCCTAGGACTCCGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CCA 72 bp | CATGAGGTCCCCTCCTCGCGTTCCTCAAACGCGAGGTaGGGGACGAGGAAGTGCAGAGCCCTCCCAAACCAC | + |
|
Preference number: 6 (lower is better) Translates to: HEVPSSRSSNAR*GTRKCRALPNH Trigger: GTGGTTTGGGAGGGCTCTGCACTTCCTCGTCCCCCACCTCGCGTTTGAGGAACGCGAGGAGGGGACCTCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS TCA 72 bp | TCCCAGCTTGGGGGAGACCCTGGTTTCTCCACCTGCTaGACTCAGGTGGGAATACCAACCCCGAGGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SQLGGDPGFSTC*TQVGIPTPRLA Trigger: GGCCAGCCTCGGGGTTGGTATTCCCACCTGAGTTCAGCAGGTGGAGAAACCAGGGTCTCCCCCAAGCTGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS TCA 72 bp | CGGACGGAGCTTGGACTAGCAAGCCGGAATGTTCCATaGGGTCCCCTCCTCGCGTTCCTCAAACGCGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RTELGLASRNVP*GPLLAFLKREV Trigger: CACCTCGCGTTTGAGGAACGCGAGGAGGGGACCTCATGGAACATTCCGGCTTGCTAGTCCAAGCTCCGTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS GCA 72 bp | TCGCGTTCCTCAAACGCGAGGTGGGGGACGAGGAAGTaGAGAGCCCTCCCAAACCACCCTCCTGTTCTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRSSNARWGTRK*RALPNHPPVLA Trigger: TGCTAGAACAGGAGGGTGGTTTGGGAGGGCTCTGCACTTCCTCGTCCCCCACCTCGCGTTTGAGGAACGCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CCA 72 bp | CCTAGCAGGAGGGGCCTTGGCTTTGTCCAGACAGGGTaGGCACCCAGTGGCAGTGAATCTGGCAGGATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PSRRGLGFVQTG*APSGSESGRMK Trigger: CTTCATCCTGCCAGATTCACTGCCACTGGGTGCCCACCCTGTCTGGACAAAGCCAAGGCCCCTCCTGCTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS GCA 72 bp | CGCGTTGCCCTGGGCCATTCTCTTGTTTGTCTCCCTTaGCAAGCTGTGGGTACCTGGAGGGCAGGGAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RVALGHSLVCLP*QAVGTWRAGKD Trigger: ATCCTTCCCTGCCCTCCAGGTACCCACAGCTTGGCAAGGGAGACAAACAAGAGAATGGCCCAGGGCAACGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CCA 72 bp | GGAAAGATCCCTGAGAGCACAGCTCTGCTCCCAGCTTaGGGGAGACCCTGGTTTCTCCACCTGCTGAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: GKIPESTALLPA*GRPWFLHLLNS Trigger: TGAGTTCAGCAGGTGGAGAAACCAGGGTCTCCCCCAAGCTGGGAGCAGAGCTGTGCTCTCAGGGATCTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CCA 72 bp | TTGGGTCACGGGGTACTCACTCCTAGGTCCAAGGCGTaGCAAAGAGATGACTGTTTGGGGGTCAGAACGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LGHGVLTPRSKA*QRDDCLGVRTD Trigger: GTCCGTTCTGACCCCCAAACAGTCATCTCTTTGCCACGCCTTGGACCTAGGAGTGAGTACCCCGTGACCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS GCA 72 bp | GTGGGAATACCAACCCCGAGGCTGGCCCCAGCAGGGTaGATGATCAATGCCTTTCTGGCTTCTTCTTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VGIPTPRLAPAG*MINAFLASSSL Trigger: CAAAGAAGAAGAAGCCAGAAAGGCATTGATCATGCACCCTGCTGGGGCCAGCCTCGGGGTTGGTATTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CCA 72 bp | AGAGATGACTGTTTGGGGGTCAGAACGGACGGAGCTTaGACTAGCAAGCCGGAATGTTCCATGAGGTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RDDCLGVRTDGA*TSKPECSMRSP Trigger: AGGGGACCTCATGGAACATTCCGGCTTGCTAGTCCAAGCTCCGTCCGTTCTGACCCCCAAACAGTCATCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CAA 90 bp | CCCACCCATTTTATAGTTTATCACGCGTTGCCCTGGGCCATTCTCTaGTTTGTCTCCCTTGCCAAGCTGTGGGTACCTGGAGGGCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PTHFIVYHALPWAIL*FVSLAKLWVPGGQG Trigger: TCCCTGCCCTCCAGGTACCCACAGCTTGGCAAGGGAGACAAACAAGAGAATGGCCCAGGGCAACGCGTGATAAACTATAAAATGGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CCA 72 bp | AGAAACCCAAACCCACCAGCTATAAGCCAAGGAGCATaGCTGGAAAGATCCCTGAGAGCACAGCTCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RNPNPPAISQGA*LERSLRAQLCS Trigger: GGAGCAGAGCTGTGCTCTCAGGGATCTTTCCAGCCATGCTCCTTGGCTTATAGCTGGTGGGTTTGGGTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CAA 90 bp | ATTTTATTCTCAGGCTCTCCTGATGTTCCCAGTATGGCTCAGAGCTaGCTTCCAGGGTCTATGCTCCTAATGGCTGATTGGGTCACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ILFSGSPDVPSMAQS*LPGSMLLMADWVTG Trigger: CCCCGTGACCCAATCAGCCATTAGGAGCATAGACCCTGGAAGCAAGCTCTGAGCCATACTGGGAACATCAGGAGAGCCTGAGAATAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CCA 72 bp | CTGCCTGCATTCTCTAAATGTCTCCCGGTTCTGTCCTaGCCCAGGCAGTTTGTTCTCTCTGCTTGGAAACAT | + |
|
Preference number: 6 (lower is better) Translates to: LPAFSKCLPVLS*PRQFVLSAWKH Trigger: ATGTTTCCAAGCAGAGAGAACAAACTGCCTGGGCCAGGACAGAACCGGGAGACATTTAGAGAATGCAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CAA 90 bp | CACACAGCAAGTGCAGACAGAGCTGGGCTTAAAATGCAGGTCTCCTaGGGAATGTCCGTGAAGTCTCCTTTCAAGTACATCCACTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: HTASADRAGLKMQVS*GMSVKSPFKYIHCL Trigger: AAGGCAGTGGATGTACTTGAAAGGAGACTTCACGGACATTCCCAAGGAGACCTGCATTTTAAGCCCAGCTCTGTCTGCACTTGCTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476839.2 |
||
| CDS CAA 90 bp | ATGTCTCCCGGTTCTGTCCTGGCCCAGGCAGTTTGTTCTCTCTGCTaGGAAACATCTCTCCTCATTCTAACAAATTCCTGCCCAGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: MSPGSVLAQAVCSLC*ETSLLILTNSCPDV Trigger: GACATCTGGGCAGGAATTTGTTAGAATGAGGAGAGATGTTTCCAAGCAGAGAGAACAAACTGCCTGGGCCAGGACAGAACCGGGAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS TCA 72 bp | CTGGGCTTAAAATGCAGGTCTCCTTGGGAATGTCCGTaGAGTCTCCTTTCAAGTACATCCACTGCCTTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LGLKCRSPWECP*SLLSSTSTAFR Trigger: CCGAAAGGCAGTGGATGTACTTGAAAGGAGACTTCACGGACATTCCCAAGGAGACCTGCATTTTAAGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436967.4 ENST00000476839.2 ENST00000492352.5 |
||
| CDS TCA 72 bp | GGCAGCAAAGCGAGATCTCATTTCTGGGTTCAGTTGTaGGGCTCCATGCGTATTAGGTGTGGGATCTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: GSKARSHFWVQL*GSMRIRCGISD Trigger: ATCTGAGATCCCACACCTAATACGCATGGAGCCTCACAACTGAACCCAGAAATGAGATCTCGCTTTGCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476839.2 |
||
| CDS TCA 72 bp | CTGCCACCTTCAGTGAATTTTATTCTCAGGCTCTCCTaGTGTTCCCAGTATGGCTCAGAGCTTGCTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LPPSVNFILRLS*CSQYGSELASR Trigger: CCTGGAAGCAAGCTCTGAGCCATACTGGGAACATCAGGAGAGCCTGAGAATAAAATTCACTGAAGGTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS GCA 72 bp | GGAATGTCCGTGAAGTCTCCTTTCAAGTACATCCACTaGCTTTCGGGAAGAAGAGGGATCTCTACGCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GMSVKSPFKYIH*LSGRRGISTQS Trigger: TGACTGCGTAGAGATCCCTCTTCTTCCCGAAAGGCAGTGGATGTACTTGAAAGGAGACTTCACGGACATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000436967.4 ENST00000476839.2 ENST00000492352.5 |
||
| CDS GCA 72 bp | CCCGGTTCTGTCCTGGCCCAGGCAGTTTGTTCTCTCTaGTTGGAAACATCTCTCCTCATTCTAACAAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: PGSVLAQAVCSL*LETSLLILTNS Trigger: GGAATTTGTTAGAATGAGGAGAGATGTTTCCAAGCAGAGAGAACAAACTGCCTGGGCCAGGACAGAACCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CAA 72 bp | TTTATAGTTTATCACGCGTTGCCCTGGGCCATTCTCTaGTTTGTCTCCCTTGCCAAGCTGTGGGTACCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: FIVYHALPWAIL*FVSLAKLWVPG Trigger: TCCAGGTACCCACAGCTTGGCAAGGGAGACAAACAAGAGAATGGCCCAGGGCAACGCGTGATAAACTATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CAA 72 bp | CTAAATGTCTCCCGGTTCTGTCCTGGCCCAGGCAGTTaGTTCTCTCTGCTTGGAAACATCTCTCCTCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: LNVSRFCPGPGS*FSLLGNISPHS Trigger: AGAATGAGGAGAGATGTTTCCAAGCAGAGAGAACAAACTGCCTGGGCCAGGACAGAACCGGGAGACATTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CAA 90 bp | TACACAGCAAGTGCAGACAGAGCTGGGCTTAAAATGCAGGTCTCCTaGGGAATGTCCGTGAAGTCTCCTTTCAAGTACATCCACTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: YTASADRAGLKMQVS*GMSVKSPFKYIHCL Trigger: AAGGCAGTGGATGTACTTGAAAGGAGACTTCACGGACATTCCCAAGGAGACCTGCATTTTAAGCCCAGCTCTGTCTGCACTTGCTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436967.4 |
||
| CDS TCA 72 bp | ACCATATACTGGCTCACCGTGATGAAGTGGGTGACTTaGCTAGTCCAATACACAGCAAGTGCAGACAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TIYWLTVMKWVT*LVQYTASADRA Trigger: AGCTCTGTCTGCACTTGCTGTGTATTGGACTAGTCAAGTCACCCACTTCATCACGGTGAGCCAGTATATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436967.4 |
||
| CDS GCA 72 bp | ATGGCCTCACCCTTTCAAAAGAAACCACTGAGCAACTaGCTGCATTCTCTAAATGTCTCCCGGTTCTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: MASPFQKKPLSN*LHSLNVSRFCP Trigger: AGGACAGAACCGGGAGACATTTAGAGAATGCAGGCAGTTGCTCAGTGGTTTCTTTTGAAAGGGTGAGGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CCA 72 bp | TCGGGAAGAAGAGGGATCTCTACGCAGTCAGGAGACTaGACCGGGATCCTGTCCTTAAAAATAATAAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SGRRGISTQSGD*TGILSLKIISP Trigger: TGGACTTATTATTTTTAAGGACAGGATCCCGGTCCAGTCTCCTGACTGCGTAGAGATCCCTCTTCTTCCCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000436967.4 ENST00000492352.5 |
||
| CDS CCA 72 bp | TTTCCCACCCATTTTATAGTTTATCACGCGTTGCCCTaGGCCATTCTCTTGTTTGTCTCCCTTGCCAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FPTHFIVYHALP*AILLFVSLAKL Trigger: CAGCTTGGCAAGGGAGACAAACAAGAGAATGGCCCAGGGCAACGCGTGATAAACTATAAAATGGGTGGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CAA 72 bp | AGTGCAGACAGAGCTGGGCTTAAAATGCAGGTCTCCTaGGGAATGTCCGTGAAGTCTCCTTTCAAGTACATC | + |
|
Preference number: 6 (lower is better) Translates to: SADRAGLKMQVS*GMSVKSPFKYI Trigger: GATGTACTTGAAAGGAGACTTCACGGACATTCCCAAGGAGACCTGCATTTTAAGCCCAGCTCTGTCTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436967.4 ENST00000476839.2 ENST00000492352.5 |
||
| CDS CAA 72 bp | CTGGATTTTCCCACCCATTTTATAGTTTATCACGCGTaGCCCTGGGCCATTCTCTTGTTTGTCTCCCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LDFPTHFIVYHA*PWAILLFVSLA Trigger: GGCAAGGGAGACAAACAAGAGAATGGCCCAGGGCAACGCGTGATAAACTATAAAATGGGTGGGAAAATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CAA 72 bp | GGTTCTGTCCTGGCCCAGGCAGTTTGTTCTCTCTGCTaGGAAACATCTCTCCTCATTCTAACAAATTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSVLAQAVCSLC*ETSLLILTNSC Trigger: GCAGGAATTTGTTAGAATGAGGAGAGATGTTTCCAAGCAGAGAGAACAAACTGCCTGGGCCAGGACAGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CAA 72 bp | CTCTCCTCTATCTCCATGTGTTGCTCCCATCACTGGTaGAATAGCCATGGCCTCACCCTTTCAAAAGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: LSSISMCCSHHW*NSHGLTLSKET Trigger: GGTTTCTTTTGAAAGGGTGAGGCCATGGCTATTCAACCAGTGATGGGAGCAACACATGGAGATAGAGGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CAA 90 bp | TTTACAGCAAGTGCAGACAGAGCTGGGCTTAAAATGCAGGTCTCCTaGGGAATGTCCGTGAAGTCTCCTTTCAAGTACATCCACTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FTASADRAGLKMQVS*GMSVKSPFKYIHCL Trigger: AAGGCAGTGGATGTACTTGAAAGGAGACTTCACGGACATTCCCAAGGAGACCTGCATTTTAAGCCCAGCTCTGTCTGCACTTGCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CAA 90 bp | TTGCTTTCTCTGGATTTTCCCACCCATTTTATAGTTTATCACGCGTaGCCCTGGGCCATTCTCTTGTTTGTCTCCCTTGCCAAGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLSLDFPTHFIVYHA*PWAILLFVSLAKLW Trigger: CCACAGCTTGGCAAGGGAGACAAACAAGAGAATGGCCCAGGGCAACGCGTGATAAACTATAAAATGGGTGGGAAAATCCAGAGAAAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CCA 72 bp | TCTCTTGTTTGTCTCCCTTGCCAAGCTGTGGGTACCTaGAGGGCAGGGAAGGATGTTTTACTCTTCAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLVCLPCQAVGT*RAGKDVLLFNK Trigger: TTTATTGAAGAGTAAAACATCCTTCCCTGCCCTCCAGGTACCCACAGCTTGGCAAGGGAGACAAACAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492352.5 |
||
| CDS CAA 72 bp | TTAGGTGTGGGATCTCAGATCAGGTTACTCAACCGCTaGGGGTCTCTTCCAATTTATAGTCCACTTCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: LGVGSQIRLLNR*GSLPIYSPLQH Trigger: GTGTTGAAGTGGACTATAAATTGGAAGAGACCCCAAGCGGTTGAGTAACCTGATCTGAGATCCCACACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476839.2 |
||
| CDS CCA 72 bp | AAAATAATAAGTCCAGAAGTGGGGCAGTTCCAGGGCTaGTTAATTAAGCAGTTTAATGACATCGGCATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KIISPEVGQFQG*LIKQFNDIGMG Trigger: GCCCATGCCGATGTCATTAAACTGCTTAATTAACCAGCCCTGGAACTGCCCCACTTCTGGACTTATTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436967.4 ENST00000492352.5 |
||