RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01803 (Homo sapiens)

Ensembl gene IDs: ENSG00000228909

Ensembl transcript IDs: ENST00000438659.2

Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GGCCATGTCTGGGCTGGACATAAGGGATGTCAGAGGCCTCCGGGGTaGCTGGGGGAGAGTCTGCTTAATCCAGGTGCCCACTTGACTAGT +
Preference number: 5 (lower is better)
Translates to: GHVWAGHKGCQRPPG*LGESLLNPGAHLTS
Trigger: ACTAGTCAAGTGGGCACCTGGATTAAGCAGACTCTCCCCCAGGCACCCCGGAGGCCTCTGACATCCCTTATGTCCAGCCCAGACATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS TCA 90 bp TCCCTTTTTATTCTGGCTATAGCCGATTGGACTGGGCAGATACGCTaGGGCCACAGAAAGGCCATGTCTGGGCTGGACATAAGGGATGTC +
Preference number: 5 (lower is better)
Translates to: SLFILAIADWTGQIR*GHRKAMSGLDIRDV
Trigger: GACATCCCTTATGTCCAGCCCAGACATGGCCTTTCTGTGGCCTCAGCGTATCTGCCCAGTCCAATCGGCTATAGCCAGAATAAAAAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS CCA 90 bp TCTTGGATCTTCCTCCCTTTTTATTCTGGCTATAGCCGATTGGACTaGGCAGATACGCTGAGGCCACAGAAAGGCCATGTCTGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: SWIFLPFYSGYSRLD*ADTLRPQKGHVWAG
Trigger: TCCAGCCCAGACATGGCCTTTCTGTGGCCTCAGCGTATCTGCCCAGTCCAATCGGCTATAGCCAGAATAAAAAGGGAGGAAGATCCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS TCA 90 bp AAATCTGGCAGGTCACTGAACTCGCTACCGCCCCAAAATGCCGAGTaGTGCATCTGTCTCCATGAGGTTGCTGTATGTTTCAGAACTGGG +
Preference number: 5 (lower is better)
Translates to: KSGRSLNSLPPQNAE*CICLHEVAVCFRTG
Trigger: CCCAGTTCTGAAACATACAGCAACCTCATGGAGACAGATGCATCACTCGGCATTTTGGGGCGGTAGCGAGTTCAGTGACCTGCCAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS TCA 90 bp GAACTCGCTACCGCCCCAAAATGCCGAGTGATGCATCTGTCTCCATaGGGTTGCTGTATGTTTCAGAACTGGGATGCAAAGTTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: ELATAPKCRVMHLSP*GCCMFQNWDAKFSF
Trigger: GAAGCTGAACTTTGCATCCCAGTTCTGAAACATACAGCAACCTCATGGAGACAGATGCATCACTCGGCATTTTGGGGCGGTAGCGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS TCA 90 bp AGTGTCTTCTCTTTCAAGTTAATGCTAAGAAATCTGGCAGGTCACTaGACTCGCTACCGCCCCAAAATGCCGAGTGATGCATCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: SVFSFKLMLRNLAGH*TRYRPKMPSDASVS
Trigger: GGAGACAGATGCATCACTCGGCATTTTGGGGCGGTAGCGAGTTCAGTGACCTGCCAGATTTCTTAGCATTAACTTGAAAGAGAAGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS GCA 90 bp GATGCATCTGTCTCCATGAGGTTGCTGTATGTTTCAGAACTGGGATaGAAAGTTCAGCTTCCCGTGACACCCGATTTTCAGAAGTATCCT +
Preference number: 5 (lower is better)
Translates to: DASVSMRLLYVSELG*KVQLPVTPDFQKYP
Trigger: AGGATACTTCTGAAAATCGGGTGTCACGGGAAGCTGAACTTTGCATCCCAGTTCTGAAACATACAGCAACCTCATGGAGACAGATGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS TCA 90 bp CCGATTTTCAGAAGTATCCTTGCAAGACATTGCCATAATTCCAGGTaGTCTGAGTCCCTCTTTCTTGTCCGCTTGACTGGTTTGACTGAC +
Preference number: 5 (lower is better)
Translates to: PIFRSILARHCHNSR*SESLFLVRLTGLTD
Trigger: GTCAGTCAAACCAGTCAAGCGGACAAGAAAGAGGGACTCAGATCACCTGGAATTATGGCAATGTCTTGCAAGGATACTTCTGAAAATCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS TCA 90 bp GGTTGCTGTATGTTTCAGAACTGGGATGCAAAGTTCAGCTTCCCGTaGCACCCGATTTTCAGAAGTATCCTTGCAAGACATTGCCATAAT +
Preference number: 5 (lower is better)
Translates to: GCCMFQNWDAKFSFP*HPIFRSILARHCHN
Trigger: ATTATGGCAATGTCTTGCAAGGATACTTCTGAAAATCGGGTGTCACGGGAAGCTGAACTTTGCATCCCAGTTCTGAAACATACAGCAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS GCA 72 bp TGGGCTGGACATAAGGGATGTCAGAGGCCTCCGGGGTaGCTGGGGGAGAGTCTGCTTAATCCAGGTGCCCAC +
Preference number: 6 (lower is better)
Translates to: WAGHKGCQRPPG*LGESLLNPGAH
Trigger: GTGGGCACCTGGATTAAGCAGACTCTCCCCCAGGCACCCCGGAGGCCTCTGACATCCCTTATGTCCAGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS CAA 90 bp CGCTACCGCCCCAAAATGCCGAGTGATGCATCTGTCTCCATGAGGTaGCTGTATGTTTCAGAACTGGGATGCAAAGTTCAGCTTCCCGTG +
Preference number: 6 (lower is better)
Translates to: RYRPKMPSDASVSMR*LYVSELGCKVQLPV
Trigger: CACGGGAAGCTGAACTTTGCATCCCAGTTCTGAAACATACAGCAACCTCATGGAGACAGATGCATCACTCGGCATTTTGGGGCGGTAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS CAA 90 bp TCCCTCTCTTGGATCTTCCTCCCTTTTTATTCTGGCTATAGCCGATaGGACTGGGCAGATACGCTGAGGCCACAGAAAGGCCATGTCTGG +
Preference number: 6 (lower is better)
Translates to: SLSWIFLPFYSGYSR*DWADTLRPQKGHVW
Trigger: CCAGACATGGCCTTTCTGTGGCCTCAGCGTATCTGCCCAGTCCAATCGGCTATAGCCAGAATAAAAAGGGAGGAAGATCCAAGAGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS TCA 72 bp AGGTCACTGAACTCGCTACCGCCCCAAAATGCCGAGTaGTGCATCTGTCTCCATGAGGTTGCTGTATGTTTC +
Preference number: 6 (lower is better)
Translates to: RSLNSLPPQNAE*CICLHEVAVCF
Trigger: GAAACATACAGCAACCTCATGGAGACAGATGCATCACTCGGCATTTTGGGGCGGTAGCGAGTTCAGTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS CCA 72 bp TTCCTCCCTTTTTATTCTGGCTATAGCCGATTGGACTaGGCAGATACGCTGAGGCCACAGAAAGGCCATGTC +
Preference number: 6 (lower is better)
Translates to: FLPFYSGYSRLD*ADTLRPQKGHV
Trigger: GACATGGCCTTTCTGTGGCCTCAGCGTATCTGCCCAGTCCAATCGGCTATAGCCAGAATAAAAAGGGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS CAA 72 bp TGGATCTTCCTCCCTTTTTATTCTGGCTATAGCCGATaGGACTGGGCAGATACGCTGAGGCCACAGAAAGGC +
Preference number: 6 (lower is better)
Translates to: WIFLPFYSGYSR*DWADTLRPQKG
Trigger: GCCTTTCTGTGGCCTCAGCGTATCTGCCCAGTCCAATCGGCTATAGCCAGAATAAAAAGGGAGGAAGATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS TCA 72 bp ACCGCCCCAAAATGCCGAGTGATGCATCTGTCTCCATaGGGTTGCTGTATGTTTCAGAACTGGGATGCAAAG +
Preference number: 6 (lower is better)
Translates to: TAPKCRVMHLSP*GCCMFQNWDAK
Trigger: CTTTGCATCCCAGTTCTGAAACATACAGCAACCTCATGGAGACAGATGCATCACTCGGCATTTTGGGGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS CAA 90 bp CCTCCGGGGTGCCTGGGGGAGAGTCTGCTTAATCCAGGTGCCCACTaGACTAGTAGAAATCAAATCAAATCAAATAAGTGTCTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: PPGCLGESLLNPGAH*TSRNQIKSNKCLLF
Trigger: AAAGAGAAGACACTTATTTGATTTGATTTGATTTCTACTAGTCAAGTGGGCACCTGGATTAAGCAGACTCTCCCCCAGGCACCCCGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS TCA 72 bp TCTTTCAAGTTAATGCTAAGAAATCTGGCAGGTCACTaGACTCGCTACCGCCCCAAAATGCCGAGTGATGCA +
Preference number: 6 (lower is better)
Translates to: SFKLMLRNLAGH*TRYRPKMPSDA
Trigger: TGCATCACTCGGCATTTTGGGGCGGTAGCGAGTTCAGTGACCTGCCAGATTTCTTAGCATTAACTTGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS CAA 72 bp CCCAAAATGCCGAGTGATGCATCTGTCTCCATGAGGTaGCTGTATGTTTCAGAACTGGGATGCAAAGTTCAG +
Preference number: 6 (lower is better)
Translates to: PKMPSDASVSMR*LYVSELGCKVQ
Trigger: CTGAACTTTGCATCCCAGTTCTGAAACATACAGCAACCTCATGGAGACAGATGCATCACTCGGCATTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS CAA 90 bp ATGCAAAGTTCAGCTTCCCGTGACACCCGATTTTCAGAAGTATCCTaGCAAGACATTGCCATAATTCCAGGTGATCTGAGTCCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: MQSSASRDTRFSEVS*QDIAIIPGDLSPSF
Trigger: GAAAGAGGGACTCAGATCACCTGGAATTATGGCAATGTCTTGCAAGGATACTTCTGAAAATCGGGTGTCACGGGAAGCTGAACTTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS CAA 72 bp TCAGCTTCCCGTGACACCCGATTTTCAGAAGTATCCTaGCAAGACATTGCCATAATTCCAGGTGATCTGAGT +
Preference number: 6 (lower is better)
Translates to: SASRDTRFSEVS*QDIAIIPGDLS
Trigger: ACTCAGATCACCTGGAATTATGGCAATGTCTTGCAAGGATACTTCTGAAAATCGGGTGTCACGGGAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438659.2
CDS TCA 72 bp ATGTTTCAGAACTGGGATGCAAAGTTCAGCTTCCCGTaGCACCCGATTTTCAGAAGTATCCTTGCAAGACAT +
Preference number: 6 (lower is better)
Translates to: MFQNWDAKFSFP*HPIFRSILARH
Trigger: ATGTCTTGCAAGGATACTTCTGAAAATCGGGTGTCACGGGAAGCTGAACTTTGCATCCCAGTTCTGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438659.2