Pregenerated sensors for LINC01796 (Homo sapiens)
Ensembl gene IDs: ENSG00000277527Ensembl transcript IDs: ENST00000611915.2, ENST00000657317.1, ENST00000663518.1, ENST00000666815.1, ENST00000670084.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGCCGGGTCCTTTTGTCCTCACCAGCAGCCCCACATTTGACTGGGTaGTTGCTGGGAGCCAGAAAGAATGTGAGTGGCTGGGCTCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: CRVLLSSPAAPHLTG*LLGARKNVSGWAPL Trigger: CAGAGGAGCCCAGCCACTCACATTCTTTCTGGCTCCCAGCAATCACCCAGTCAAATGTGGGGCTGCTGGTGAGGACAAAAGGACCCGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670084.1 |
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| CDS CCA 90 bp | GTTCTGCCGGGTCCTTTTGTCCTCACCAGCAGCCCCACATTTGACTaGGTGATTGCTGGGAGCCAGAAAGAATGTGAGTGGCTGGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: VLPGPFVLTSSPTFD*VIAGSQKECEWLGS Trigger: GGAGCCCAGCCACTCACATTCTTTCTGGCTCCCAGCAATCACCCAGTCAAATGTGGGGCTGCTGGTGAGGACAAAAGGACCCGGCAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670084.1 |
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| CDS TCA 90 bp | TGGCCTGTTAGGAACCGGGCCACACAGTGTGAGGTGAATGGCTGGTaGGCCAGTGAAGCTTCATTTCTATTTAAAGCCACTCCCCATTGC | + |
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Preference number: 5 (lower is better) Translates to: WPVRNRATQCEVNGW*ASEASFLFKATPHC Trigger: GCAATGGGGAGTGGCTTTAAATAGAAATGAAGCTTCACTGGCTCACCAGCCATTCACCTCACACTGTGTGGCCCGGTTCCTAACAGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS GCA 90 bp | TCAGTGCCTCTTCTTCAGTGGAGCTGCAGAACTACAGTCAGGCACTaGATCAGGACAGGTCAATCAAGGAACTGCACATTCAGTGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: SVPLLQWSCRTTVRH*IRTGQSRNCTFSGG Trigger: ACCACCACTGAATGTGCAGTTCCTTGATTGACCTGTCCTGATGCAGTGCCTGACTGTAGTTCTGCAGCTCCACTGAAGAAGAGGCACTGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657317.1 ENST00000666815.1 ENST00000670084.1 |
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| CDS TCA 90 bp | CCTTTCAGGATGACTAGTGAACCACCCTACCCACACAGCAGGTCCTaGACCGTCAGCAGAACTACTTCCTTTGCTCCTCACCTATTACTT | + |
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Preference number: 5 (lower is better) Translates to: PFRMTSEPPYPHSRS*TVSRTTSFAPHLLL Trigger: AAGTAATAGGTGAGGAGCAAAGGAAGTAGTTCTGCTGACGGTTCAGGACCTGCTGTGTGGGTAGGGTGGTTCACTAGTCATCCTGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657317.1 ENST00000663518.1 ENST00000666815.1 ENST00000670084.1 |
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| CDS TCA 90 bp | CTTCATTTCTATTTAAAGCCACTCCCCATTGCTCACATTACCCCCTaGGTTCCGCCTCCTGTCAGATCAGTGGCGGCATCAGAGTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: LHFYLKPLPIAHITP*VPPPVRSVAASESH Trigger: ATGAGACTCTGATGCCGCCACTGATCTGACAGGAGGCGGAACTCAGGGGGTAATGTGAGCAATGGGGAGTGGCTTTAAATAGAAATGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS GCA 90 bp | TGCTCTGTCACTGTCTCCCATCACCTCCAGATGGGACCATCTAGTTaGAGGAAAATGAGCTCAGGGCTCCCACTGATTCTACATTATCGT | + |
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Preference number: 5 (lower is better) Translates to: CSVTVSHHLQMGPSS*RKMSSGLPLILHYR Trigger: ACGATAATGTAGAATCAGTGGGAGCCCTGAGCTCATTTTCCTGCAACTAGATGGTCCCATCTGGAGGTGATGGGAGACAGTGACAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS TCA 90 bp | TCTTTCAGGATGACTAGTGAACCACCCTACCCACACAGCAGGTCCTaGACCGTCAGCAGAACTACTTCCTTTGCTCCTCACCTATTACTT | + |
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Preference number: 5 (lower is better) Translates to: SFRMTSEPPYPHSRS*TVSRTTSFAPHLLL Trigger: AAGTAATAGGTGAGGAGCAAAGGAAGTAGTTCTGCTGACGGTTCAGGACCTGCTGTGTGGGTAGGGTGGTTCACTAGTCATCCTGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611915.2 |
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| CDS CCA 90 bp | GGCGTAAACCCTATCGTGAACTGTGCATGCGAAGGATCTAGGTTGTaGGCTCCTTATGAGAATCTAACACCTGATGCTCTGTCACTGTCT | + |
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Preference number: 5 (lower is better) Translates to: GVNPIVNCACEGSRL*APYENLTPDALSLS Trigger: AGACAGTGACAGAGCATCAGGTGTTAGATTCTCATAAGGAGCCCACAACCTAGATCCTTCGCATGCACAGTTCACGATAGGGTTTACGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS CCA 90 bp | TGCCCTTTGCTTCTGAAAGACTGCAGCATCGTGTGGAGCATTTGGTaGCTAATAACACAGCATTCGTTACCCTGCGATGCACTTCTCATC | + |
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Preference number: 5 (lower is better) Translates to: CPLLLKDCSIVWSIW*LITQHSLPCDALLI Trigger: GATGAGAAGTGCATCGCAGGGTAACGAATGCTGTGTTATTAGCCACCAAATGCTCCACACGATGCTGCAGTCTTTCAGAAGCAAAGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657317.1 ENST00000666815.1 |
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| CDS CCA 90 bp | ATGTGCCCTTTGCTTCTGAAAGACTGCAGCATCGTGTGGAGCATTTaGTGGCTAATAACACAGCATTCGTTACCCTGCGATGCACTTCTC | + |
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Preference number: 5 (lower is better) Translates to: MCPLLLKDCSIVWSI*WLITQHSLPCDALL Trigger: GAGAAGTGCATCGCAGGGTAACGAATGCTGTGTTATTAGCCACCAAATGCTCCACACGATGCTGCAGTCTTTCAGAAGCAAAGGGCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657317.1 ENST00000666815.1 |
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| CDS TCA 90 bp | CCGGCTTTGTCACTTATGTTATTTGCATCTCAAATGAGGCAAGTTTaGGGTGAATGGTTGGCACCAATGCCAATCGAACGCTCCAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: PALSLMLFASQMRQV*GEWLAPMPIERSRA Trigger: TGCTCTGGAGCGTTCGATTGGCATTGGTGCCAACCATTCACCTCAAACTTGCCTCATTTGAGATGCAAATAACATAAGTGACAAAGCCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS TCA 90 bp | TTTGTCACTTATGTTATTTGCATCTCAAATGAGGCAAGTTTGAGGTaGATGGTTGGCACCAATGCCAATCGAACGCTCCAGAGCAGGGGT | + |
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Preference number: 5 (lower is better) Translates to: FVTYVICISNEASLR*MVGTNANRTLQSRG Trigger: ACCCCTGCTCTGGAGCGTTCGATTGGCATTGGTGCCAACCATTCACCTCAAACTTGCCTCATTTGAGATGCAAATAACATAAGTGACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS TCA 90 bp | TCTTTAAAACTTGCTGTGTATGAGACACAAGGTAGGGTGGGTTGGTaGAGGCCGACTGTCCATTTCTGCTATCAGCTAAAGACCATCATT | + |
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Preference number: 5 (lower is better) Translates to: SLKLAVYETQGRVGW*RPTVHFCYQLKTII Trigger: AATGATGGTCTTTAGCTGATAGCAGAAATGGACAGTCGGCCTTCACCAACCCACCCTACCTTGTGTCTCATACACAGCAAGTTTTAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611915.2 |
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| CDS GCA 90 bp | ATCGTGTGGAGCATTTGGTGGCTAATAACACAGCATTCGTTACCCTaGGATGCACTTCTCATCACATTAATCAAGCTCAAGAGTGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: IVWSIWWLITQHSLP*DALLITLIKLKSED Trigger: ATCCTCACTCTTGAGCTTGATTAATGTGATGAGAAGTGCATCGCAGGGTAACGAATGCTGTGTTATTAGCCACCAAATGCTCCACACGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657317.1 ENST00000666815.1 |
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| CDS CCA 90 bp | TTTATTTCAATGTGCCCTTTGCTTCTGAAAGACTGCAGCATCGTGTaGAGCATTTGGTGGCTAATAACACAGCATTCGTTACCCTGCGAT | + |
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Preference number: 5 (lower is better) Translates to: FISMCPLLLKDCSIV*SIWWLITQHSLPCD Trigger: ATCGCAGGGTAACGAATGCTGTGTTATTAGCCACCAAATGCTCCACACGATGCTGCAGTCTTTCAGAAGCAAAGGGCACATTGAAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657317.1 ENST00000666815.1 |
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| CDS TCA 90 bp | CGTCAGCAGAACTACTTCCTTTGCTCCTCACCTATTACTTTGTTTTaGAAGTCTATGAAGTCAGCATTCAGGCTCTTTGAGTTGCAATCC | + |
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Preference number: 5 (lower is better) Translates to: RQQNYFLCSSPITLF*KSMKSAFRLFELQS Trigger: GGATTGCAACTCAAAGAGCCTGAATGCTGACTTCATAGACTTTCAAAACAAAGTAATAGGTGAGGAGCAAAGGAAGTAGTTCTGCTGACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663518.1 ENST00000666815.1 |
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| CDS TCA 90 bp | CAGATTAAAAACCGGCTTTGTCACTTATGTTATTTGCATCTCAAATaGGGCAAGTTTGAGGTGAATGGTTGGCACCAATGCCAATCGAAC | + |
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Preference number: 5 (lower is better) Translates to: QIKNRLCHLCYLHLK*GKFEVNGWHQCQSN Trigger: GTTCGATTGGCATTGGTGCCAACCATTCACCTCAAACTTGCCTCATTTGAGATGCAAATAACATAAGTGACAAAGCCGGTTTTTAATCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS GCA 90 bp | TTTATCATATTGTTAACTGAGTTAGAAACTCACTTGAATATTCTGTaGCATCAAGCGGATTTCATTTCTAGCTTGCAGGTGGATTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: FIILLTELETHLNIL*HQADFISSLQVDFF Trigger: GAAGAAATCCACCTGCAAGCTAGAAATGAAATCCGCTTGATGGCACAGAATATTCAAGTGAGTTTCTAACTCAGTTAACAATATGATAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611915.2 |
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| CDS CCA 72 bp | GGGGTCCGCAACCCCCGGCCACAGATCGGTATTGATTaGTGGCCTGTTAGGAACCGGGCCACACAGTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: GVRNPRPQIGID*WPVRNRATQCE Trigger: CTCACACTGTGTGGCCCGGTTCCTAACAGGCCACCAATCAATACCGATCTGTGGCCGGGGGTTGCGGACCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS CCA 72 bp | GTCCGCAACCCCCGGCCACAGATCGGTATTGATTGGTaGCCTGTTAGGAACCGGGCCACACAGTGTGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VRNPRPQIGIDW*PVRNRATQCEV Trigger: CACCTCACACTGTGTGGCCCGGTTCCTAACAGGCCACCAATCAATACCGATCTGTGGCCGGGGGTTGCGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS TCA 72 bp | GGTGGCCTGTTAGGAACCGGGCCACACAGTGTGAGGTaGATGGCTGGTGAGCCAGTGAAGCTTCATTTCTAT | + |
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Preference number: 6 (lower is better) Translates to: GGLLGTGPHSVR*MAGEPVKLHFY Trigger: ATAGAAATGAAGCTTCACTGGCTCACCAGCCATTCACCTCACACTGTGTGGCCCGGTTCCTAACAGGCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS TCA 72 bp | CTTTTGTCCTCACCAGCAGCCCCACATTTGACTGGGTaGTTGCTGGGAGCCAGAAAGAATGTGAGTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LLSSPAAPHLTG*LLGARKNVSGW Trigger: CCAGCCACTCACATTCTTTCTGGCTCCCAGCAATCACCCAGTCAAATGTGGGGCTGCTGGTGAGGACAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670084.1 |
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| CDS CCA 72 bp | GGTCCTTTTGTCCTCACCAGCAGCCCCACATTTGACTaGGTGATTGCTGGGAGCCAGAAAGAATGTGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: GPFVLTSSPTFD*VIAGSQKECEW Trigger: CCACTCACATTCTTTCTGGCTCCCAGCAATCACCCAGTCAAATGTGGGGCTGCTGGTGAGGACAAAAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670084.1 |
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| CDS CAA 90 bp | CTGTGGCTAGAAATTACTCAGTGTTGTGGAAGTAGATCGTTGGAGTaGCCCCCATTTGCCGAGTTGAGTCTGGGGTCCAGTTGGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LWLEITQCCGSRSLE*PPFAELSLGSSWPP Trigger: GGGAGGCCAACTGGACCCCAGACTCAACTCGGCAAATGGGGGCAACTCCAACGATCTACTTCCACAACACTGAGTAATTTCTAGCCACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670084.1 |
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| CDS TCA 72 bp | ATGACTAGTGAACCACCCTACCCACACAGCAGGTCCTaGACCGTCAGCAGAACTACTTCCTTTGCTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: MTSEPPYPHSRS*TVSRTTSFAPH Trigger: GTGAGGAGCAAAGGAAGTAGTTCTGCTGACGGTTCAGGACCTGCTGTGTGGGTAGGGTGGTTCACTAGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000611915.2 ENST00000657317.1 ENST00000663518.1 ENST00000666815.1 ENST00000670084.1 |
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| CDS TCA 72 bp | CTTGCTGTGTATGAGACACAAGGTAGGGTGGGTTGGTaGAGGCCGACTGTCCATTTCTGCTATCAGCTAAAG | + |
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Preference number: 6 (lower is better) Translates to: LAVYETQGRVGW*RPTVHFCYQLK Trigger: CTTTAGCTGATAGCAGAAATGGACAGTCGGCCTTCACCAACCCACCCTACCTTGTGTCTCATACACAGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611915.2 |
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| CDS TCA 72 bp | AGGAACCGGGCCACACAGTGTGAGGTGAATGGCTGGTaGGCCAGTGAAGCTTCATTTCTATTTAAAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: RNRATQCEVNGW*ASEASFLFKAT Trigger: AGTGGCTTTAAATAGAAATGAAGCTTCACTGGCTCACCAGCCATTCACCTCACACTGTGTGGCCCGGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS GCA 72 bp | CTTCTTCAGTGGAGCTGCAGAACTACAGTCAGGCACTaGATCAGGACAGGTCAATCAAGGAACTGCACATTC | + |
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Preference number: 6 (lower is better) Translates to: LLQWSCRTTVRH*IRTGQSRNCTF Trigger: GAATGTGCAGTTCCTTGATTGACCTGTCCTGATGCAGTGCCTGACTGTAGTTCTGCAGCTCCACTGAAGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657317.1 ENST00000663518.1 ENST00000666815.1 ENST00000670084.1 |
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| CDS CAA 72 bp | GAAATTACTCAGTGTTGTGGAAGTAGATCGTTGGAGTaGCCCCCATTTGCCGAGTTGAGTCTGGGGTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: EITQCCGSRSLE*PPFAELSLGSS Trigger: ACTGGACCCCAGACTCAACTCGGCAAATGGGGGCAACTCCAACGATCTACTTCCACAACACTGAGTAATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670084.1 |
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| CDS CAA 72 bp | TGGCTAGAAATTACTCAGTGTTGTGGAAGTAGATCGTaGGAGTTGCCCCCATTTGCCGAGTTGAGTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: WLEITQCCGSRS*ELPPFAELSLG Trigger: CCCCAGACTCAACTCGGCAAATGGGGGCAACTCCAACGATCTACTTCCACAACACTGAGTAATTTCTAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670084.1 |
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| CDS CAA 90 bp | AGAGGCGTAAACCCTATCGTGAACTGTGCATGCGAAGGATCTAGGTaGTGGGCTCCTTATGAGAATCTAACACCTGATGCTCTGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: RGVNPIVNCACEGSR*WAPYENLTPDALSL Trigger: CAGTGACAGAGCATCAGGTGTTAGATTCTCATAAGGAGCCCACAACCTAGATCCTTCGCATGCACAGTTCACGATAGGGTTTACGCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS CCA 72 bp | CCTATCGTGAACTGTGCATGCGAAGGATCTAGGTTGTaGGCTCCTTATGAGAATCTAACACCTGATGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PIVNCACEGSRL*APYENLTPDAL Trigger: CAGAGCATCAGGTGTTAGATTCTCATAAGGAGCCCACAACCTAGATCCTTCGCATGCACAGTTCACGATAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS CCA 72 bp | CTTCTGAAAGACTGCAGCATCGTGTGGAGCATTTGGTaGCTAATAACACAGCATTCGTTACCCTGCGATGCA | + |
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Preference number: 6 (lower is better) Translates to: LLKDCSIVWSIW*LITQHSLPCDA Trigger: TGCATCGCAGGGTAACGAATGCTGTGTTATTAGCCACCAAATGCTCCACACGATGCTGCAGTCTTTCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657317.1 ENST00000666815.1 |
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| CDS CAA 90 bp | AATGTGCCCTTTGCTTCTGAAAGACTGCAGCATCGTGTGGAGCATTaGGTGGCTAATAACACAGCATTCGTTACCCTGCGATGCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: NVPFASERLQHRVEH*VANNTAFVTLRCTS Trigger: AGAAGTGCATCGCAGGGTAACGAATGCTGTGTTATTAGCCACCAAATGCTCCACACGATGCTGCAGTCTTTCAGAAGCAAAGGGCACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657317.1 ENST00000666815.1 |
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| CDS CAA 90 bp | CCTACCCACACAGCAGGTCCTGAACCGTCAGCAGAACTACTTCCTTaGCTCCTCACCTATTACTTTGTTTTGAAAGTCTATGAAGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: PTHTAGPEPSAELLP*LLTYYFVLKVYEVS Trigger: GCTGACTTCATAGACTTTCAAAACAAAGTAATAGGTGAGGAGCAAAGGAAGTAGTTCTGCTGACGGTTCAGGACCTGCTGTGTGGGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000611915.2 ENST00000657317.1 ENST00000663518.1 ENST00000666815.1 ENST00000670084.1 |
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| CDS GCA 72 bp | GTCAGGCACTGCATCAGGACAGGTCAATCAAGGAACTaGACATTCAGTGGTGGTCATGCAAAATTATCATGG | + |
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Preference number: 6 (lower is better) Translates to: VRHCIRTGQSRN*TFSGGHAKLSW Trigger: CCATGATAATTTTGCATGACCACCACTGAATGTGCAGTTCCTTGATTGACCTGTCCTGATGCAGTGCCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670084.1 |
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| CDS CCA 72 bp | TTGCTTCTGAAAGACTGCAGCATCGTGTGGAGCATTTaGTGGCTAATAACACAGCATTCGTTACCCTGCGAT | + |
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Preference number: 6 (lower is better) Translates to: LLLKDCSIVWSI*WLITQHSLPCD Trigger: ATCGCAGGGTAACGAATGCTGTGTTATTAGCCACCAAATGCTCCACACGATGCTGCAGTCTTTCAGAAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657317.1 ENST00000666815.1 |
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| CDS CAA 72 bp | AACCCTATCGTGAACTGTGCATGCGAAGGATCTAGGTaGTGGGCTCCTTATGAGAATCTAACACCTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: NPIVNCACEGSR*WAPYENLTPDA Trigger: AGCATCAGGTGTTAGATTCTCATAAGGAGCCCACAACCTAGATCCTTCGCATGCACAGTTCACGATAGGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS CAA 72 bp | TTTGCTTCTGAAAGACTGCAGCATCGTGTGGAGCATTaGGTGGCTAATAACACAGCATTCGTTACCCTGCGA | + |
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Preference number: 6 (lower is better) Translates to: FASERLQHRVEH*VANNTAFVTLR Trigger: TCGCAGGGTAACGAATGCTGTGTTATTAGCCACCAAATGCTCCACACGATGCTGCAGTCTTTCAGAAGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657317.1 ENST00000666815.1 |
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| CDS CCA 72 bp | TTGTACTTGCATAGGCAGCTTCCTGCTAAGAGTCACTaGAGAGTACACAAACCTCTTCCTGTAACTGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: LYLHRQLPAKSH*RVHKPLPVTGL Trigger: TAACCCAGTTACAGGAAGAGGTTTGTGTACTCTCCAGTGACTCTTAGCAGGAAGCTGCCTATGCAAGTACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611915.2 |
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| CDS CAA 90 bp | ACTGTCCATTTCTGCTATCAGCTAAAGACCATCATTCCACCCATTTaGTACTTGCATAGGCAGCTTCCTGCTAAGAGTCACTGGAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: TVHFCYQLKTIIPPI*YLHRQLPAKSHWRV Trigger: TACTCTCCAGTGACTCTTAGCAGGAAGCTGCCTATGCAAGTACAAAATGGGTGGAATGATGGTCTTTAGCTGATAGCAGAAATGGACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611915.2 |
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| CDS TCA 72 bp | TATGTTATTTGCATCTCAAATGAGGCAAGTTTGAGGTaGATGGTTGGCACCAATGCCAATCGAACGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: YVICISNEASLR*MVGTNANRTLQ Trigger: CTGGAGCGTTCGATTGGCATTGGTGCCAACCATTCACCTCAAACTTGCCTCATTTGAGATGCAAATAACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS CAA 72 bp | TATCAGCTAAAGACCATCATTCCACCCATTTTGTACTaGCATAGGCAGCTTCCTGCTAAGAGTCACTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: YQLKTIIPPILY*HRQLPAKSHWR Trigger: TCTCCAGTGACTCTTAGCAGGAAGCTGCCTATGCAAGTACAAAATGGGTGGAATGATGGTCTTTAGCTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611915.2 |
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| CDS CAA 72 bp | TTCTGCTATCAGCTAAAGACCATCATTCCACCCATTTaGTACTTGCATAGGCAGCTTCCTGCTAAGAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: FCYQLKTIIPPI*YLHRQLPAKSH Trigger: GTGACTCTTAGCAGGAAGCTGCCTATGCAAGTACAAAATGGGTGGAATGATGGTCTTTAGCTGATAGCAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611915.2 |
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| CDS CAA 90 bp | CATTTCTGCTATCAGCTAAAGACCATCATTCCACCCATTTTGTACTaGCATAGGCAGCTTCCTGCTAAGAGTCACTGGAGAGTACACAAA | + |
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Preference number: 6 (lower is better) Translates to: HFCYQLKTIIPPILY*HRQLPAKSHWRVHK Trigger: TTTGTGTACTCTCCAGTGACTCTTAGCAGGAAGCTGCCTATGCAAGTACAAAATGGGTGGAATGATGGTCTTTAGCTGATAGCAGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611915.2 |
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| CDS TCA 72 bp | TCACTTATGTTATTTGCATCTCAAATGAGGCAAGTTTaGGGTGAATGGTTGGCACCAATGCCAATCGAACGC | + |
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Preference number: 6 (lower is better) Translates to: SLMLFASQMRQV*GEWLAPMPIER Trigger: GCGTTCGATTGGCATTGGTGCCAACCATTCACCTCAAACTTGCCTCATTTGAGATGCAAATAACATAAGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663518.1 |
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| CDS GCA 72 bp | AGCATTTGGTGGCTAATAACACAGCATTCGTTACCCTaGGATGCACTTCTCATCACATTAATCAAGCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: SIWWLITQHSLP*DALLITLIKLK Trigger: CTTGAGCTTGATTAATGTGATGAGAAGTGCATCGCAGGGTAACGAATGCTGTGTTATTAGCCACCAAATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657317.1 ENST00000666815.1 |
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| CDS CAA 72 bp | ACAGCAGGTCCTGAACCGTCAGCAGAACTACTTCCTTaGCTCCTCACCTATTACTTTGTTTTGAAAGTCTAT | + |
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Preference number: 6 (lower is better) Translates to: TAGPEPSAELLP*LLTYYFVLKVY Trigger: ATAGACTTTCAAAACAAAGTAATAGGTGAGGAGCAAAGGAAGTAGTTCTGCTGACGGTTCAGGACCTGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000611915.2 ENST00000657317.1 ENST00000663518.1 ENST00000666815.1 ENST00000670084.1 |
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| CDS CAA 90 bp | AACAGTTATTGTGGAAGTCCTGGTCCATCTGTTTTTATAACAACTTaGCAGGTTTCAACAGGATTTGCTGCATTTAGCAAGTCGTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: NSYCGSPGPSVFITT*QVSTGFAAFSKSSN Trigger: GTTGGACGACTTGCTAAATGCAGCAAATCCTGTTGAAACCTGCAAAGTTGTTATAAAAACAGATGGACCAGGACTTCCACAATAACTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611915.2 |
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| CDS CAA 72 bp | TGTGGAAGTCCTGGTCCATCTGTTTTTATAACAACTTaGCAGGTTTCAACAGGATTTGCTGCATTTAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: CGSPGPSVFITT*QVSTGFAAFSK Trigger: CTTGCTAAATGCAGCAAATCCTGTTGAAACCTGCAAAGTTGTTATAAAAACAGATGGACCAGGACTTCCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611915.2 |
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| CDS GCA 72 bp | TTGTTAACTGAGTTAGAAACTCACTTGAATATTCTGTaGCATCAAGCGGATTTCATTTCTAGCTTGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LLTELETHLNIL*HQADFISSLQV Trigger: CACCTGCAAGCTAGAAATGAAATCCGCTTGATGGCACAGAATATTCAAGTGAGTTTCTAACTCAGTTAACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611915.2 |
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| CDS CCA 72 bp | TTTAACTGCCCATCCAAACAGTTATTGTGGAAGTCCTaGTCCATCTGTTTTTATAACAACTTTGCAGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: FNCPSKQLLWKS*SICFYNNFAGF Trigger: GAAACCTGCAAAGTTGTTATAAAAACAGATGGACCAGGACTTCCACAATAACTGTTTGGATGGGCAGTTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611915.2 |
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