Pregenerated sensors for LINC01795 (Homo sapiens)
Ensembl gene IDs: ENSG00000225226Ensembl transcript IDs: ENST00000454367.2, ENST00000655335.1, ENST00000660850.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGCGCCTCGCTGGATCAGGAGCACAGCAGACACCTTGCCGGATCTaGACGGATGGAAGTCAGCAGCAGGTCTGCGACAGCGGCAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: GRLAGSGAQQTPCRI*TDGSQQQVCDSGKQ Trigger: CTGTTTGCCGCTGTCGCAGACCTGCTGCTGACTTCCATCCGTCCAGATCCGGCAAGGTGTCTGCTGTGCTCCTGATCCAGCGAGGCGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS GCA 90 bp | AGCTGTAATGGGCGCCTCGCTGGATCAGGAGCACAGCAGACACCTTaGCGGATCTGGACGGATGGAAGTCAGCAGCAGGTCTGCGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCNGRLAGSGAQQTP*RIWTDGSQQQVCDS Trigger: GCTGTCGCAGACCTGCTGCTGACTTCCATCCGTCCAGATCCGGCAAGGTGTCTGCTGTGCTCCTGATCCAGCGAGGCGCCCATTACAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CCA 90 bp | CGCTGGATCAGGAGCACAGCAGACACCTTGCCGGATCTGGACGGATaGAAGTCAGCAGCAGGTCTGCGACAGCGGCAAACAGCAGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RWIRSTADTLPDLDG*KSAAGLRQRQTAVV Trigger: CACCACTGCTGTTTGCCGCTGTCGCAGACCTGCTGCTGACTTCCATCCGTCCAGATCCGGCAAGGTGTCTGCTGTGCTCCTGATCCAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS GCA 90 bp | CAGACACCTTGCCGGATCTGGACGGATGGAAGTCAGCAGCAGGTCTaGGACAGCGGCAAACAGCAGTGGTGGACGGCGAGAGAAAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QTPCRIWTDGSQQQV*DSGKQQWWTARESS Trigger: TGAGCTTTCTCTCGCCGTCCACCACTGCTGTTTGCCGCTGTCGCAGACCTGCTGCTGACTTCCATCCGTCCAGATCCGGCAAGGTGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CCA 90 bp | GATGGAAGTCAGCAGCAGGTCTGCGACAGCGGCAAACAGCAGTGGTaGACGGCGAGAGAAAGCTCAGCTCGAACCATGACAAATGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: DGSQQQVCDSGKQQW*TARESSARTMTNVD Trigger: GTCTACATTTGTCATGGTTCGAGCTGAGCTTTCTCTCGCCGTCCACCACTGCTGTTTGCCGCTGTCGCAGACCTGCTGCTGACTTCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CCA 90 bp | ACGGATGGAAGTCAGCAGCAGGTCTGCGACAGCGGCAAACAGCAGTaGTGGACGGCGAGAGAAAGCTCAGCTCGAACCATGACAAATGTA | + |
|
Preference number: 5 (lower is better) Translates to: TDGSQQQVCDSGKQQ*WTARESSARTMTNV Trigger: TACATTTGTCATGGTTCGAGCTGAGCTTTCTCTCGCCGTCCACCACTGCTGTTTGCCGCTGTCGCAGACCTGCTGCTGACTTCCATCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS GCA 90 bp | ACAGAGCTCCCATACAAAGGGAGGGGACCCAAAGAGCGTAGCTGTTaGTGGCTCAGATGCCTGGGTTTATATGCTGATCATTGTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TELPYKGRGPKERSC*WLRCLGLYADHCPS Trigger: GGAGGGACAATGATCAGCATATAAACCCAGGCATCTGAGCCAGCAACAGCTACGCTCTTTGGGTCCCCTCCCTTTGTATGGGAGCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655335.1 |
||
| CDS GCA 90 bp | AAGCTTATCAGCACAGTATTTGGCCTATTGTTACCAGGTGGTCCTTaGTCCCAGAGCTCCCAAGATGGTGGTGGGCCACTTCCAAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: KLISTVFGLLLPGGP*SQSSQDGGGPLPKW Trigger: CCATTTTGGAAGTGGCCCACCACCATCTTGGGAGCTCTGGGAGCAAGGACCACCTGGTAACAATAGGCCAAATACTGTGCTGATAAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS GCA 90 bp | GCAACCAACGAGTCTAATCATGTAGACAGAGGGCAGTTGCCAGAATaGAGAAAGCAACCTTCTCTAGAGTCGAGCAAAAGAAGCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ATNESNHVDRGQLPE*RKQPSLESSKRSWS Trigger: TGACCAGCTTCTTTTGCTCGACTCTAGAGAAGGTTGCTTTCTGCATTCTGGCAACTGCCCTCTGTCTACATGATTAGACTCGTTGGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000454367.2 ENST00000655335.1 ENST00000660850.1 |
||
| CDS CCA 90 bp | CCAGAATGCAGAAAGCAACCTTCTCTAGAGTCGAGCAAAAGAAGCTaGTCATCGGAGAGATGTCCATCCTTTATCTTGGGGATGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PECRKQPSLESSKRS*SSERCPSFILGMKL Trigger: AAGCTTCATCCCCAAGATAAAGGATGGACATCTCTCCGATGACCAGCTTCTTTTGCTCGACTCTAGAGAAGGTTGCTTTCTGCATTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000454367.2 ENST00000655335.1 ENST00000660850.1 |
||
| CDS CCA 90 bp | AGAGTTGGCTTAGAGATTGTGCCCAGTAAGTTAAACCCTGTGCACTaGATCCCTTCATTACTCCAGAAAGCACTGCAACCAACGAGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: RVGLEIVPSKLNPVH*IPSLLQKALQPTSL Trigger: TAGACTCGTTGGTTGCAGTGCTTTCTGGAGTAATGAAGGGATCCAGTGCACAGGGTTTAACTTACTGGGCACAATCTCTAAGCCAACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000454367.2 ENST00000655335.1 ENST00000660850.1 |
||
| CDS TCA 90 bp | ACAAATGTAGACCAAAAGAGAGTGCAGCTGCAAGATTTAATAGAGTaGAGACAGAGCTCCCATACAAAGGGAGGGGACCCAAAGAGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: TNVDQKRVQLQDLIE*RQSSHTKGGDPKSV Trigger: TACGCTCTTTGGGTCCCCTCCCTTTGTATGGGAGCTCTGTCTTCACTCTATTAAATCTTGCAGCTGCACTCTCTTTTGGTCTACATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS TCA 90 bp | AAAGAAGCTGGTCATCGGAGAGATGTCCATCCTTTATCTTGGGGATaGAGCTTCTGGATACAATCAAGGCAAGATGACACCATCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: KEAGHRRDVHPLSWG*SFWIQSRQDDTISI Trigger: GATGGAGATGGTGTCATCTTGCCTTGATTGTATCCAGAAGCTTCATCCCCAAGATAAAGGATGGACATCTCTCCGATGACCAGCTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000454367.2 ENST00000655335.1 ENST00000660850.1 |
||
| CDS TCA 90 bp | ACTGCTATAGGCAGAAGGATCTTAAATGCAAACTCAGATTGCCCCTaGATCTTTGATGTAGAATCCTTGCTTCAGGGTCTTCTTGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: TAIGRRILNANSDCP*IFDVESLLQGLLAT Trigger: GGTTGCAAGAAGACCCTGAAGCAAGGATTCTACATCAAAGATTCAGGGGCAATCTGAGTTTGCATTTAAGATCCTTCTGCCTATAGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000454367.2 ENST00000655335.1 ENST00000660850.1 |
||
| CDS TCA 90 bp | AGGCAGAAGGATCTTAAATGCAAACTCAGATTGCCCCTGAATCTTTaGTGTAGAATCCTTGCTTCAGGGTCTTCTTGCAACCATAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: RQKDLKCKLRLPLNL*CRILASGSSCNHNV Trigger: GACATTATGGTTGCAAGAAGACCCTGAAGCAAGGATTCTACATCAAAGATTCAGGGGCAATCTGAGTTTGCATTTAAGATCCTTCTGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000454367.2 ENST00000655335.1 ENST00000660850.1 |
||
| CDS TCA 90 bp | TTCTGGATACAATCAAGGCAAGATGACACCATCTCCATCAATAGATaGGGATTCAGGGCAGGCTTTCAAGAAAGCACTTCAGTTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: FWIQSRQDDTISINR*GFRAGFQESTSVDL Trigger: AAGATCAACTGAAGTGCTTTCTTGAAAGCCTGCCCTGAATCCTCATCTATTGATGGAGATGGTGTCATCTTGCCTTGATTGTATCCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660850.1 |
||
| CDS GCA 72 bp | GGGCGCCTCGCTGGATCAGGAGCACAGCAGACACCTTaGCGGATCTGGACGGATGGAAGTCAGCAGCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GRLAGSGAQQTP*RIWTDGSQQQV Trigger: GACCTGCTGCTGACTTCCATCCGTCCAGATCCGGCAAGGTGTCTGCTGTGCTCCTGATCCAGCGAGGCGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS GCA 72 bp | TGCCGGATCTGGACGGATGGAAGTCAGCAGCAGGTCTaGGACAGCGGCAAACAGCAGTGGTGGACGGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: CRIWTDGSQQQV*DSGKQQWWTAR Trigger: TCTCGCCGTCCACCACTGCTGTTTGCCGCTGTCGCAGACCTGCTGCTGACTTCCATCCGTCCAGATCCGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CCA 72 bp | ACCAGGTGGTCCTTGCTCCCAGAGCTCCCAAGATGGTaGTGGGCCACTTCCAAAATGGCGGCGGGCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TRWSLLPELPRW*WATSKMAAGCF Trigger: GAAGCAGCCCGCCGCCATTTTGGAAGTGGCCCACCACCATCTTGGGAGCTCTGGGAGCAAGGACCACCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CCA 72 bp | GTTACCAGGTGGTCCTTGCTCCCAGAGCTCCCAAGATaGTGGTGGGCCACTTCCAAAATGGCGGCGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VTRWSLLPELPR*WWATSKMAAGC Trigger: GCAGCCCGCCGCCATTTTGGAAGTGGCCCACCACCATCTTGGGAGCTCTGGGAGCAAGGACCACCTGGTAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CAA 72 bp | TGGGCGCCTCGCTGGATCAGGAGCACAGCAGACACCTaGCCGGATCTGGACGGATGGAAGTCAGCAGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: WAPRWIRSTADT*PDLDGWKSAAG Trigger: ACCTGCTGCTGACTTCCATCCGTCCAGATCCGGCAAGGTGTCTGCTGTGCTCCTGATCCAGCGAGGCGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CCA 72 bp | GCTGGATCAGGAGCACAGCAGACACCTTGCCGGATCTaGACGGATGGAAGTCAGCAGCAGGTCTGCGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: AGSGAQQTPCRI*TDGSQQQVCDS Trigger: GCTGTCGCAGACCTGCTGCTGACTTCCATCCGTCCAGATCCGGCAAGGTGTCTGCTGTGCTCCTGATCCAGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CCA 72 bp | AGGTGGTCCTTGCTCCCAGAGCTCCCAAGATGGTGGTaGGCCACTTCCAAAATGGCGGCGGGCTGCTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RWSLLPELPRWW*ATSKMAAGCFQ Trigger: TTGGAAGCAGCCCGCCGCCATTTTGGAAGTGGCCCACCACCATCTTGGGAGCTCTGGGAGCAAGGACCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CCA 72 bp | CAGCAGCAGGTCTGCGACAGCGGCAAACAGCAGTGGTaGACGGCGAGAGAAAGCTCAGCTCGAACCATGACA | + |
|
Preference number: 6 (lower is better) Translates to: QQQVCDSGKQQW*TARESSARTMT Trigger: TGTCATGGTTCGAGCTGAGCTTTCTCTCGCCGTCCACCACTGCTGTTTGCCGCTGTCGCAGACCTGCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CCA 72 bp | AGTCAGCAGCAGGTCTGCGACAGCGGCAAACAGCAGTaGTGGACGGCGAGAGAAAGCTCAGCTCGAACCATG | + |
|
Preference number: 6 (lower is better) Translates to: SQQQVCDSGKQQ*WTARESSARTM Trigger: CATGGTTCGAGCTGAGCTTTCTCTCGCCGTCCACCACTGCTGTTTGCCGCTGTCGCAGACCTGCTGCTGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CCA 72 bp | AGGAGCACAGCAGACACCTTGCCGGATCTGGACGGATaGAAGTCAGCAGCAGGTCTGCGACAGCGGCAAACA | + |
|
Preference number: 6 (lower is better) Translates to: RSTADTLPDLDG*KSAAGLRQRQT Trigger: TGTTTGCCGCTGTCGCAGACCTGCTGCTGACTTCCATCCGTCCAGATCCGGCAAGGTGTCTGCTGTGCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CCA 72 bp | GGCCACTTCCAAAATGGCGGCGGGCTGCTTCCAAGATaGTGGCAAGCCTCGTGTTCTCTGACCTGGGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GHFQNGGGLLPR*WQASCSLTWGS Trigger: AGAACCCCAGGTCAGAGAACACGAGGCTTGCCACCATCTTGGAAGCAGCCCGCCGCCATTTTGGAAGTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CCA 72 bp | CACTTCCAAAATGGCGGCGGGCTGCTTCCAAGATGGTaGCAAGCCTCGTGTTCTCTGACCTGGGGTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HFQNGGGLLPRW*QASCSLTWGSW Trigger: CCAAGAACCCCAGGTCAGAGAACACGAGGCTTGCCACCATCTTGGAAGCAGCCCGCCGCCATTTTGGAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS TCA 72 bp | GGCTGCTTCCAAGATGGTGGCAAGCCTCGTGTTCTCTaGCCTGGGGTTCTTGGCCTCACGGATTCCAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GCFQDGGKPRVL*PGVLGLTDSKE Trigger: TTCCTTGGAATCCGTGAGGCCAAGAACCCCAGGTCAGAGAACACGAGGCTTGCCACCATCTTGGAAGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CCA 72 bp | TGGTGGCAAGCCTCGTGTTCTCTGACCTGGGGTTCTTaGCCTCACGGATTCCAAGGAATGGAATCTTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WWQASCSLTWGS*PHGFQGMESWA Trigger: GGCCCAAGATTCCATTCCTTGGAATCCGTGAGGCCAAGAACCCCAGGTCAGAGAACACGAGGCTTGCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CAA 72 bp | ATGGTGGCAAGCCTCGTGTTCTCTGACCTGGGGTTCTaGGCCTCACGGATTCCAAGGAATGGAATCTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MVASLVFSDLGF*ASRIPRNGILG Trigger: GCCCAAGATTCCATTCCTTGGAATCCGTGAGGCCAAGAACCCCAGGTCAGAGAACACGAGGCTTGCCACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CAA 72 bp | CAGCACAGTATTTGGCCTATTGTTACCAGGTGGTCCTaGCTCCCAGAGCTCCCAAGATGGTGGTGGGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: QHSIWPIVTRWS*LPELPRWWWAT Trigger: AGTGGCCCACCACCATCTTGGGAGCTCTGGGAGCAAGGACCACCTGGTAACAATAGGCCAAATACTGTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000454367.2 ENST00000655335.1 ENST00000660850.1 |
||
| CDS GCA 72 bp | AGCACAGTATTTGGCCTATTGTTACCAGGTGGTCCTTaGTCCCAGAGCTCCCAAGATGGTGGTGGGCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: STVFGLLLPGGP*SQSSQDGGGPL Trigger: AAGTGGCCCACCACCATCTTGGGAGCTCTGGGAGCAAGGACCACCTGGTAACAATAGGCCAAATACTGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000454367.2 ENST00000655335.1 ENST00000660850.1 |
||
| CDS CAA 90 bp | CAAGCTTATCAGCACAGTATTTGGCCTATTGTTACCAGGTGGTCCTaGCTCCCAGAGCTCCCAAGATGGTGGTGGGCCACTTCCAAAATG | + |
|
Preference number: 6 (lower is better) Translates to: QAYQHSIWPIVTRWS*LPELPRWWWATSKM Trigger: CATTTTGGAAGTGGCCCACCACCATCTTGGGAGCTCTGGGAGCAAGGACCACCTGGTAACAATAGGCCAAATACTGTGCTGATAAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS GCA 72 bp | GGCCTCACGGATTCCAAGGAATGGAATCTTGGGCCATaGAGTGAGTGTTATAGCTCTATTAGAAGCCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLTDSKEWNLGP*SECYSSIRSRG Trigger: CCCACGGCTTCTAATAGAGCTATAACACTCACTGCATGGCCCAAGATTCCATTCCTTGGAATCCGTGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CCA 72 bp | TTCAGGGCAGGCTTTCAAGCTTATCAGCACAGTATTTaGCCTATTGTTACCAGGTGGTCCTTGCTCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FRAGFQAYQHSI*PIVTRWSLLPE Trigger: CTCTGGGAGCAAGGACCACCTGGTAACAATAGGCCAAATACTGTGCTGATAAGCTTGAAAGCCTGCCCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CCA 72 bp | TACAAAGGGAGGGGACCCAAAGAGCGTAGCTGTTGCTaGCTCAGATGCCTGGGTTTATATGCTGATCATTGT | + |
|
Preference number: 6 (lower is better) Translates to: YKGRGPKERSCC*LRCLGLYADHC Trigger: ACAATGATCAGCATATAAACCCAGGCATCTGAGCCAGCAACAGCTACGCTCTTTGGGTCCCCTCCCTTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655335.1 |
||
| CDS CAA 72 bp | CAGGCTTTCAAGCTTATCAGCACAGTATTTGGCCTATaGTTACCAGGTGGTCCTTGCTCCCAGAGCTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: QAFKLISTVFGL*LPGGPCSQSSQ Trigger: TTGGGAGCTCTGGGAGCAAGGACCACCTGGTAACAATAGGCCAAATACTGTGCTGATAAGCTTGAAAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CAA 90 bp | ATAACTTATCAGCACAGTATTTGGCCTATTGTTACCAGGTGGTCCTaGCTCCCAGAGCTCCCAAGATGGTGGTGGGCCACTTCCAAAATG | + |
|
Preference number: 6 (lower is better) Translates to: ITYQHSIWPIVTRWS*LPELPRWWWATSKM Trigger: CATTTTGGAAGTGGCCCACCACCATCTTGGGAGCTCTGGGAGCAAGGACCACCTGGTAACAATAGGCCAAATACTGTGCTGATAAGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660850.1 |
||
| CDS TCA 72 bp | GACCAAAAGAGAGTGCAGCTGCAAGATTTAATAGAGTaGAGACAGAGCTCCCATACAAAGGGAGGGGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: DQKRVQLQDLIE*RQSSHTKGGDP Trigger: TGGGTCCCCTCCCTTTGTATGGGAGCTCTGTCTTCACTCTATTAAATCTTGCAGCTGCACTCTCTTTTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS CAA 90 bp | GAAAGCACTGCAACCAACGAGTCTAATCATGTAGACAGAGGGCAGTaGCCAGAATGCAGAAAGCAACCTTCTCTAGAGTCGAGCAAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ESTATNESNHVDRGQ*PECRKQPSLESSKR Trigger: TCTTTTGCTCGACTCTAGAGAAGGTTGCTTTCTGCATTCTGGCAACTGCCCTCTGTCTACATGATTAGACTCGTTGGTTGCAGTGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000454367.2 ENST00000655335.1 ENST00000660850.1 |
||
| CDS CCA 72 bp | AGAAAGCAACCTTCTCTAGAGTCGAGCAAAAGAAGCTaGTCATCGGAGAGATGTCCATCCTTTATCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RKQPSLESSKRS*SSERCPSFILG Trigger: CCCCAAGATAAAGGATGGACATCTCTCCGATGACCAGCTTCTTTTGCTCGACTCTAGAGAAGGTTGCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000454367.2 ENST00000655335.1 ENST00000660850.1 |
||
| CDS CAA 72 bp | GGGTTCTTGGCCTCACGGATTCCAAGGAATGGAATCTaGGGCCATGCAGTGAGTGTTATAGCTCTATTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GFLASRIPRNGI*GHAVSVIALLE Trigger: TTCTAATAGAGCTATAACACTCACTGCATGGCCCAAGATTCCATTCCTTGGAATCCGTGAGGCCAAGAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS TCA 72 bp | CAATCAAGGCAAGATGACACCATCTCCATCAATAGATaGGGATTCAGGGCAGGCTTTCAAGCTTATCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: QSRQDDTISINR*GFRAGFQAYQH Trigger: GTGCTGATAAGCTTGAAAGCCTGCCCTGAATCCTCATCTATTGATGGAGATGGTGTCATCTTGCCTTGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454367.2 ENST00000655335.1 |
||
| CDS GCA 72 bp | GAGTCTAATCATGTAGACAGAGGGCAGTTGCCAGAATaGAGAAAGCAACCTTCTCTAGAGTCGAGCAAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ESNHVDRGQLPE*RKQPSLESSKR Trigger: TCTTTTGCTCGACTCTAGAGAAGGTTGCTTTCTGCATTCTGGCAACTGCCCTCTGTCTACATGATTAGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000454367.2 ENST00000655335.1 ENST00000660850.1 |
||
| CDS CCA 72 bp | TTAGAGATTGTGCCCAGTAAGTTAAACCCTGTGCACTaGATCCCTTCATTACTCCAGAAAGCACTGCAACCA | + |
|
Preference number: 6 (lower is better) Translates to: LEIVPSKLNPVH*IPSLLQKALQP Trigger: TGGTTGCAGTGCTTTCTGGAGTAATGAAGGGATCCAGTGCACAGGGTTTAACTTACTGGGCACAATCTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000454367.2 ENST00000655335.1 ENST00000660850.1 |
||
| CDS CAA 72 bp | AGAAGCTGGTCATCGGAGAGATGTCCATCCTTTATCTaGGGGATGAAGCTTCTGGATACAATCAAGGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSWSSERCPSFI*GMKLLDTIKAR Trigger: TCTTGCCTTGATTGTATCCAGAAGCTTCATCCCCAAGATAAAGGATGGACATCTCTCCGATGACCAGCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000454367.2 ENST00000655335.1 ENST00000660850.1 |
||
| CDS TCA 72 bp | CAATCAAGGCAAGATGACACCATCTCCATCAATAGATaGGGATTCAGGGCAGGCTTTCAAGAAAGCACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QSRQDDTISINR*GFRAGFQESTS Trigger: TGAAGTGCTTTCTTGAAAGCCTGCCCTGAATCCTCATCTATTGATGGAGATGGTGTCATCTTGCCTTGATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660850.1 |
||
| CDS TCA 72 bp | GGCAGAAGGATCTTAAATGCAAACTCAGATTGCCCCTaGATCTTTGATGTAGAATCCTTGCTTCAGGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GRRILNANSDCP*IFDVESLLQGL Trigger: AAGACCCTGAAGCAAGGATTCTACATCAAAGATTCAGGGGCAATCTGAGTTTGCATTTAAGATCCTTCTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000454367.2 ENST00000655335.1 ENST00000660850.1 |
||
| CDS TCA 72 bp | GATCTTAAATGCAAACTCAGATTGCCCCTGAATCTTTaGTGTAGAATCCTTGCTTCAGGGTCTTCTTGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: DLKCKLRLPLNL*CRILASGSSCN Trigger: GTTGCAAGAAGACCCTGAAGCAAGGATTCTACATCAAAGATTCAGGGGCAATCTGAGTTTGCATTTAAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000454367.2 ENST00000655335.1 ENST00000660850.1 |
||