Pregenerated sensors for LINC01793 (Homo sapiens)

Ensembl gene IDs: ENSG00000222030

Ensembl transcript IDs: ENST00000409590.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TCATTAACTACAGGCATTCCAGTTTTCTTTAGATTAGTCCAGCCATaGTCACTCATGCCTGGCACCATTTCTCTGAAGCTCACACTTATG	+
Preference number: 5 (lower is better) Translates to: SLTTGIPVFFRLVQP*SLMPGTISLKLTLM Trigger: CATAAGTGTGAGCTTCAGAGAAATGGTGCCAGGCATGAGTGATCATGGCTGGACTAATCTAAAGAAAACTGGAATGCCTGTAGTTAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409590.1
CDS CCA 90 bp	GGGTCTGAGGAAGGCATTGACTACAGAGATCAGCTGGGAACTTTCTaGGATGATGGAAAAGTTTTGTATATTGATTGTAGTGATGGTCAT	+
Preference number: 5 (lower is better) Translates to: GSEEGIDYRDQLGTF*DDGKVLYIDCSDGH Trigger: ATGACCATCACTACAATCAATATACAAAACTTTTCCATCATCCCAGAAAGTTCCCAGCTGATCTCTGTAGTCAATGCCTTCCTCAGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409590.1
CDS TCA 90 bp	ATTTACCATATTACCTGGCAATCTCACTCCCAGGTATTTGCCTACTaGAAATATAAGCCCACACAATGGACAAGACCTGTATACAAATAC	+
Preference number: 5 (lower is better) Translates to: IYHITWQSHSQVFAY*KYKPTQWTRPVYKY Trigger: GTATTTGTATACAGGTCTTGTCCATTGTGTGGGCTTATATTTTCAGTAGGCAAATACCTGGGAGTGAGATTGCCAGGTAATATGGTAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409590.1
CDS CAA 72 bp	CAGTGGTTGCCAGAGGCTGGGGGTCTGAGGAAGGCATaGACTACAGAGATCAGCTGGGAACTTTCTGGGATG	+
Preference number: 6 (lower is better) Translates to: QWLPEAGGLRKA*TTEISWELSGM Trigger: CATCCCAGAAAGTTCCCAGCTGATCTCTGTAGTCAATGCCTTCCTCAGACCCCCAGCCTCTGGCAACCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409590.1
CDS CCA 72 bp	TCAGGGACAAACATCAGATCAGTGGTTGCCAGAGGCTaGGGGTCTGAGGAAGGCATTGACTACAGAGATCAG	+
Preference number: 6 (lower is better) Translates to: SGTNIRSVVARG*GSEEGIDYRDQ Trigger: CTGATCTCTGTAGTCAATGCCTTCCTCAGACCCCCAGCCTCTGGCAACCACTGATCTGATGTTTGTCCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409590.1
CDS TCA 72 bp	GGCACTGCACTGGAGTCCAGAAATCCTCCCTGGGGTTaGTATCAAGCCCTTTACTCAGGAAATGTTGCCTTT	+
Preference number: 6 (lower is better) Translates to: GTALESRNPPWG*YQALYSGNVAF Trigger: AAAGGCAACATTTCCTGAGTAAAGGGCTTGATATCAACCCCAGGGAGGATTTCTGGACTCCAGTGCAGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409590.1
CDS TCA 72 bp	ATTACCTGGCAATCTCACTCCCAGGTATTTGCCTACTaGAAATATAAGCCCACACAATGGACAAGACCTGTA	+
Preference number: 6 (lower is better) Translates to: ITWQSHSQVFAY*KYKPTQWTRPV Trigger: TACAGGTCTTGTCCATTGTGTGGGCTTATATTTTCAGTAGGCAAATACCTGGGAGTGAGATTGCCAGGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409590.1
CDS TCA 72 bp	GATAGAACACACACTTTACCAAAGAAGAGACCTCGTTaGCAAATAAGCACATACAAATGTACTCAACATTAT	+
Preference number: 6 (lower is better) Translates to: DRTHTLPKKRPR*QISTYKCTQHY Trigger: ATAATGTTGAGTACATTTGTATGTGCTTATTTGTCAACGAGGTCTCTTCTTTGGTAAAGTGTGTGTTCTATC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409590.1

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