Pregenerated sensors for LINC01792 (Homo sapiens)
Ensembl gene IDs: ENSG00000237166Ensembl transcript IDs: ENST00000452787.2, ENST00000653867.1, ENST00000655127.1, ENST00000661396.1, ENST00000663258.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCTCCAGGCCAGAACGGGCACGTCCCACACGCGAGCAAGGCTTCTTaGTGTGCCGCCCGTCAGAGCCAAGTCTGTGATGGCGCCTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: SPGQNGHVPHASKAS*CAARQSQVCDGASV Trigger: AACAGAGGCGCCATCACAGACTTGGCTCTGACGGGCGGCACAGCAAGAAGCCTTGCTCGCGTGTGGGACGTGCCCGTTCTGGCCTGGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452787.2 ENST00000655127.1 ENST00000661396.1 |
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| CDS CCA 90 bp | TTGGTGACAATGAGTAATCAGGTGGCGGTGGCGAGGTGGTGTCTCTaGGCCCTCTCTCCAGGCCAGAACGGGCACGTCCCACACGCGAGC | + |
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Preference number: 5 (lower is better) Translates to: LVTMSNQVAVARWCL*ALSPGQNGHVPHAS Trigger: GCTCGCGTGTGGGACGTGCCCGTTCTGGCCTGGAGAGAGGGCCCAGAGACACCACCTCGCCACCGCCACCTGATTACTCATTGTCACCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452787.2 ENST00000655127.1 ENST00000661396.1 |
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| CDS TCA 90 bp | CGCGAGCAAGGCTTCTTGCTGTGCCGCCCGTCAGAGCCAAGTCTGTaGTGGCGCCTCTGTTCCAGGTTGTTACAGAGCTGGGCAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: REQGFLLCRPSEPSL*WRLCSRLLQSWAAP Trigger: AGGAGCTGCCCAGCTCTGTAACAACCTGGAACAGAGGCGCCATCACAGACTTGGCTCTGACGGGCGGCACAGCAAGAAGCCTTGCTCGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452787.2 ENST00000655127.1 ENST00000661396.1 |
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| CDS CCA 90 bp | GTCATCTCATTGGTGACAATGAGTAATCAGGTGGCGGTGGCGAGGTaGTGTCTCTGGGCCCTCTCTCCAGGCCAGAACGGGCACGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: VISLVTMSNQVAVAR*CLWALSPGQNGHVP Trigger: TGGGACGTGCCCGTTCTGGCCTGGAGAGAGGGCCCAGAGACACCACCTCGCCACCGCCACCTGATTACTCATTGTCACCAATGAGATGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452787.2 ENST00000655127.1 ENST00000661396.1 |
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| CDS GCA 90 bp | GGCTGTTTCCCACACTGTAGACCCCCTTCCTCCTTTGGTCCTCTCTaGCCTTCCCTGGGTCTCCCATTTCAGACCTTGCTGTGCTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: GCFPHCRPPSSFGPL*PSLGLPFQTLLCFP Trigger: TGGGAAGCACAGCAAGGTCTGAAATGGGAGACCCAGGGAAGGGCAGAGAGGACCAAAGGAGGAAGGGGGTCTACAGTGTGGGAAACAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000655127.1 ENST00000661396.1 ENST00000663258.1 |
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| CDS GCA 90 bp | CCTGTGGATGCAGGGTCTGCCTGGTCAACGGCAAAGGTGTCTTTATaGATCTTCGGGAGGTTGGCCTGTTACAGGACAGGGAGGACAGAG | + |
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Preference number: 5 (lower is better) Translates to: PVDAGSAWSTAKVSL*IFGRLACYRTGRTE Trigger: CTCTGTCCTCCCTGTCCTGTAACAGGCCAACCTCCCGAAGATGCATAAAGACACCTTTGCCGTTGACCAGGCAGACCCTGCATCCACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000655127.1 ENST00000661396.1 |
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| CDS GCA 90 bp | GGTCCTCTCTGCCCTTCCCTGGGTCTCCCATTTCAGACCTTGCTGTaGTTCCCAGTCCCCCACATGGAACTCAGACTCCAATTTCCATCA | + |
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Preference number: 5 (lower is better) Translates to: GPLCPSLGLPFQTLL*FPVPHMELRLQFPS Trigger: TGATGGAAATTGGAGTCTGAGTTCCATGTGGGGGACTGGGAAGCACAGCAAGGTCTGAAATGGGAGACCCAGGGAAGGGCAGAGAGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000655127.1 ENST00000661396.1 ENST00000663258.1 |
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| CDS CCA 90 bp | CAGGGAGCACCTTTCTCTCTATGTCCTGTGGATGCAGGGTCTGCCTaGTCAACGGCAAAGGTGTCTTTATGCATCTTCGGGAGGTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: QGAPFSLCPVDAGSA*STAKVSLCIFGRLA Trigger: GGCCAACCTCCCGAAGATGCATAAAGACACCTTTGCCGTTGACCAGGCAGACCCTGCATCCACAGGACATAGAGAGAAAGGTGCTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000655127.1 ENST00000661396.1 ENST00000663258.1 |
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| CDS GCA 90 bp | TCCCCCACATGGAACTCAGACTCCAATTTCCATCAGTCAAGGGCTTaGCTCTTCAGGCACATGTCCTCAGCTCCCACTAAGAGGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: SPTWNSDSNFHQSRA*LFRHMSSAPTKRSS Trigger: TGAGGACCTCTTAGTGGGAGCTGAGGACATGTGCCTGAAGAGGCAAGCCCTTGACTGATGGAAATTGGAGTCTGAGTTCCATGTGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000655127.1 ENST00000661396.1 ENST00000663258.1 |
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| CDS GCA 90 bp | TGTTCAGGGAGCACCTTTCTCTCTATGTCCTGTGGATGCAGGGTCTaGCTGGTCAACGGCAAAGGTGTCTTTATGCATCTTCGGGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: CSGSTFLSMSCGCRV*LVNGKGVFMHLREV Trigger: AACCTCCCGAAGATGCATAAAGACACCTTTGCCGTTGACCAGGCAGACCCTGCATCCACAGGACATAGAGAGAAAGGTGCTCCCTGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000655127.1 ENST00000661396.1 ENST00000663258.1 |
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| CDS GCA 90 bp | CCAGATCAGTGTTCAGGGAGCACCTTTCTCTCTATGTCCTGTGGATaGAGGGTCTGCCTGGTCAACGGCAAAGGTGTCTTTATGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: PDQCSGSTFLSMSCG*RVCLVNGKGVFMHL Trigger: AAGATGCATAAAGACACCTTTGCCGTTGACCAGGCAGACCCTGCATCCACAGGACATAGAGAGAAAGGTGCTCCCTGAACACTGATCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000655127.1 ENST00000661396.1 ENST00000663258.1 |
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| CDS CCA 90 bp | TTATCCAGATCAGTGTTCAGGGAGCACCTTTCTCTCTATGTCCTGTaGATGCAGGGTCTGCCTGGTCAACGGCAAAGGTGTCTTTATGCA | + |
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Preference number: 5 (lower is better) Translates to: LSRSVFREHLSLYVL*MQGLPGQRQRCLYA Trigger: TGCATAAAGACACCTTTGCCGTTGACCAGGCAGACCCTGCATCCACAGGACATAGAGAGAAAGGTGCTCCCTGAACACTGATCTGGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000655127.1 ENST00000661396.1 ENST00000663258.1 |
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| CDS TCA 90 bp | TCTCTGAGGTGTCCTGGAGCAGGAATCAGGTCTCCCCTCTCTCTTTaGCATCATGACTTTGACACTTCGGAAGAGTTTGGCCAGTTATCT | + |
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Preference number: 5 (lower is better) Translates to: SLRCPGAGIRSPLSL*HHDFDTSEEFGQLS Trigger: AGATAACTGGCCAAACTCTTCCGAAGTGTCAAAGTCATGATGTCAAAGAGAGAGGGGAGACCTGATTCCTGCTCCAGGACACCTCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000661396.1 ENST00000663258.1 |
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| CDS CCA 90 bp | TTTTCCAAACCAGACAGCCTGATTCTCTTGCTGATCTGCTGTAGCTaGGCTGGTTGTTGGTCCAAGAAGGTTTACAAGATGGCAGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: FSKPDSLILLLICCS*AGCWSKKVYKMAEK Trigger: TTTTTCTGCCATCTTGTAAACCTTCTTGGACCAACAACCAGCCCAGCTACAGCAGATCAGCAAGAGAATCAGGCTGTCTGGTTTGGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655127.1 |
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| CDS TCA 90 bp | TCTGCTGTAGCTGGGCTGATGATAAAACATCTTTGGATATCCAACTaGGATTTTCTTGGGTATAATGACAGTTCCTCTTTCCTTCCAATA | + |
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Preference number: 5 (lower is better) Translates to: SAVAGLMIKHLWISN*DFLGYNDSSSFLPI Trigger: TATTGGAAGGAAAGAGGAACTGTCATTATACCCAAGAAAATCTCAGTTGGATATCCAAAGATGTTTTATCATCAGCCCAGCTACAGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000452787.2 ENST00000653867.1 |
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| CDS TCA 90 bp | GAGGTTGGCCTGTTACTGATGATAAAACATCTTTGGATATCCAACTaGGATTTTCTTGGGTATAATGACAGTTCCTCTTTCCTTCCAATA | + |
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Preference number: 5 (lower is better) Translates to: EVGLLLMIKHLWISN*DFLGYNDSSSFLPI Trigger: TATTGGAAGGAAAGAGGAACTGTCATTATACCCAAGAAAATCTCAGTTGGATATCCAAAGATGTTTTATCATCAGTAACAGGCCAACCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663258.1 |
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| CDS GCA 90 bp | CCTTTGGATCAAATTCTTGCTTGTGAATTGTCTTATCAAGCATTTTaGACATGTTTATCTCTAACCTGGTGGACGAAAATGCCAAACTTC | + |
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Preference number: 5 (lower is better) Translates to: PLDQILACELSYQAF*TCLSLTWWTKMPNF Trigger: GAAGTTTGGCATTTTCGTCCACCAGGTTAGAGATAAACATGTGCAAAATGCTTGATAAGACAATTCACAAGCAAGAATTTGATCCAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000663258.1 |
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| CDS GCA 72 bp | CAGAACGGGCACGTCCCACACGCGAGCAAGGCTTCTTaGTGTGCCGCCCGTCAGAGCCAAGTCTGTGATGGC | + |
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Preference number: 6 (lower is better) Translates to: QNGHVPHASKAS*CAARQSQVCDG Trigger: GCCATCACAGACTTGGCTCTGACGGGCGGCACAGCAAGAAGCCTTGCTCGCGTGTGGGACGTGCCCGTTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452787.2 ENST00000655127.1 ENST00000661396.1 |
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| CDS CCA 72 bp | ATGAGTAATCAGGTGGCGGTGGCGAGGTGGTGTCTCTaGGCCCTCTCTCCAGGCCAGAACGGGCACGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: MSNQVAVARWCL*ALSPGQNGHVP Trigger: TGGGACGTGCCCGTTCTGGCCTGGAGAGAGGGCCCAGAGACACCACCTCGCCACCGCCACCTGATTACTCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452787.2 ENST00000655127.1 ENST00000661396.1 |
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| CDS TCA 72 bp | GGCTTCTTGCTGTGCCGCCCGTCAGAGCCAAGTCTGTaGTGGCGCCTCTGTTCCAGGTTGTTACAGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GFLLCRPSEPSL*WRLCSRLLQSW Trigger: CCAGCTCTGTAACAACCTGGAACAGAGGCGCCATCACAGACTTGGCTCTGACGGGCGGCACAGCAAGAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452787.2 ENST00000655127.1 ENST00000661396.1 |
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| CDS CAA 90 bp | TGTTGCGTCCAGGCTGTTTCCCACACTGTAGACCCCCTTCCTCCTTaGGTCCTCTCTGCCCTTCCCTGGGTCTCCCATTTCAGACCTTGC | + |
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Preference number: 6 (lower is better) Translates to: CCVQAVSHTVDPLPP*VLSALPWVSHFRPC Trigger: GCAAGGTCTGAAATGGGAGACCCAGGGAAGGGCAGAGAGGACCAAAGGAGGAAGGGGGTCTACAGTGTGGGAAACAGCCTGGACGCAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000655127.1 ENST00000661396.1 ENST00000663258.1 |
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| CDS CAA 72 bp | CAGGCTGTTTCCCACACTGTAGACCCCCTTCCTCCTTaGGTCCTCTCTGCCCTTCCCTGGGTCTCCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: QAVSHTVDPLPP*VLSALPWVSHF Trigger: GAAATGGGAGACCCAGGGAAGGGCAGAGAGGACCAAAGGAGGAAGGGGGTCTACAGTGTGGGAAACAGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000655127.1 ENST00000661396.1 ENST00000663258.1 |
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| CDS GCA 72 bp | GCAGGGTCTGCCTGGTCAACGGCAAAGGTGTCTTTATaGATCTTCGGGAGGTTGGCCTGTTACAGGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: AGSAWSTAKVSL*IFGRLACYRTG Trigger: CCCTGTCCTGTAACAGGCCAACCTCCCGAAGATGCATAAAGACACCTTTGCCGTTGACCAGGCAGACCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000655127.1 ENST00000661396.1 |
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| CDS CAA 90 bp | TCCTTTGGTCCTCTCTGCCCTTCCCTGGGTCTCCCATTTCAGACCTaGCTGTGCTTCCCAGTCCCCCACATGGAACTCAGACTCCAATTT | + |
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Preference number: 6 (lower is better) Translates to: SFGPLCPSLGLPFQT*LCFPVPHMELRLQF Trigger: AAATTGGAGTCTGAGTTCCATGTGGGGGACTGGGAAGCACAGCAAGGTCTGAAATGGGAGACCCAGGGAAGGGCAGAGAGGACCAAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000655127.1 ENST00000661396.1 ENST00000663258.1 |
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| CDS GCA 72 bp | ACTGGGGAAATGGACGCCTCTGCACTGACCCAGCAATaGTTATCCAGATCAGTGTTCAGGGAGCACCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: TGEMDASALTQQ*LSRSVFREHLS Trigger: AGAAAGGTGCTCCCTGAACACTGATCTGGATAAGCATTGCTGGGTCAGTGCAGAGGCGTCCATTTCCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000655127.1 ENST00000661396.1 ENST00000663258.1 |
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| CDS CCA 72 bp | CCTTTCTCTCTATGTCCTGTGGATGCAGGGTCTGCCTaGTCAACGGCAAAGGTGTCTTTATGCATCTTCGGG | + |
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Preference number: 6 (lower is better) Translates to: PFSLCPVDAGSA*STAKVSLCIFG Trigger: CCCGAAGATGCATAAAGACACCTTTGCCGTTGACCAGGCAGACCCTGCATCCACAGGACATAGAGAGAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000655127.1 ENST00000661396.1 ENST00000663258.1 |
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| CDS TCA 72 bp | TGTCCTGGAGCAGGAATCAGGTCTCCCCTCTCTCTTTaGCATCATGACTTTGACACTTCGGAAGAGTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: CPGAGIRSPLSL*HHDFDTSEEFG Trigger: GCCAAACTCTTCCGAAGTGTCAAAGTCATGATGTCAAAGAGAGAGGGGAGACCTGATTCCTGCTCCAGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000661396.1 ENST00000663258.1 |
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| CDS GCA 72 bp | AGCACCTTTCTCTCTATGTCCTGTGGATGCAGGGTCTaGCTGGTCAACGGCAAAGGTGTCTTTATGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: STFLSMSCGCRV*LVNGKGVFMHL Trigger: AAGATGCATAAAGACACCTTTGCCGTTGACCAGGCAGACCCTGCATCCACAGGACATAGAGAGAAAGGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000655127.1 ENST00000661396.1 ENST00000663258.1 |
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| CDS CCA 72 bp | CCAGACAGCCTGATTCTCTTGCTGATCTGCTGTAGCTaGGCTGGTTGTTGGTCCAAGAAGGTTTACAAGATG | + |
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Preference number: 6 (lower is better) Translates to: PDSLILLLICCS*AGCWSKKVYKM Trigger: CATCTTGTAAACCTTCTTGGACCAACAACCAGCCCAGCTACAGCAGATCAGCAAGAGAATCAGGCTGTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655127.1 |
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| CDS CCA 72 bp | GGGTTTTCATTTAGTTGTCCTGTCTCTGAGGTGTCCTaGAGCAGGAATCAGGTCTCCCCTCTCTCTTTGACA | + |
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Preference number: 6 (lower is better) Translates to: GFSFSCPVSEVS*SRNQVSPLSLT Trigger: TGTCAAAGAGAGAGGGGAGACCTGATTCCTGCTCCAGGACACCTCAGAGACAGGACAACTAAATGAAAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661396.1 |
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| CDS CCA 72 bp | ACATTTTCATTTAGTTGTCCTGTCTCTGAGGTGTCCTaGAGCAGGAATCAGGTCTCCCCTCTCTCTTTGACA | + |
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Preference number: 6 (lower is better) Translates to: TFSFSCPVSEVS*SRNQVSPLSLT Trigger: TGTCAAAGAGAGAGGGGAGACCTGATTCCTGCTCCAGGACACCTCAGAGACAGGACAACTAAATGAAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653867.1 ENST00000663258.1 |
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| CDS CAA 90 bp | CCTGACATCTCCAAGAAACTCTTAGGTGTCCTAACAGACTTTCTTTaGACCCTACCTCAGGGGATGTACTCATACGAGGTCACTACGTTT | + |
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Preference number: 6 (lower is better) Translates to: PDISKKLLGVLTDFL*TLPQGMYSYEVTTF Trigger: AAACGTAGTGACCTCGTATGAGTACATCCCCTGAGGTAGGGTCAAAAGAAAGTCTGTTAGGACACCTAAGAGTTTCTTGGAGATGTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661396.1 |
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| CDS TCA 72 bp | GACAGCATCTTTACTTCAGAACCCCGGTGGATATCCTaGCATCTCCAAGAAACTCTTAGGTGTCCTAACAGA | + |
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Preference number: 6 (lower is better) Translates to: DSIFTSEPRWIS*HLQETLRCPNR Trigger: TCTGTTAGGACACCTAAGAGTTTCTTGGAGATGTCAGGATATCCACCGGGGTTCTGAAGTAAAGATGCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661396.1 |
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| CDS CAA 72 bp | TCCAAGAAACTCTTAGGTGTCCTAACAGACTTTCTTTaGACCCTACCTCAGGGGATGTACTCATACGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SKKLLGVLTDFL*TLPQGMYSYEV Trigger: GACCTCGTATGAGTACATCCCCTGAGGTAGGGTCAAAAGAAAGTCTGTTAGGACACCTAAGAGTTTCTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661396.1 |
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| CDS TCA 72 bp | GGTGGACGAAAATGCCAAACTTCACAAGATCCACAGTaGGTCCATAGTAGACATTTTCATTTAGTTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GGRKCQTSQDPQ*VHSRHFHLVVL Trigger: CAGGACAACTAAATGAAAATGTCTACTATGGACTCACTGTGGATCTTGTGAAGTTTGGCATTTTCGTCCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653867.1 ENST00000663258.1 |
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| CDS CAA 90 bp | GATTTATTAACTTACACCTCAAACCAAATAAAGGAGCACCGTGTGTaGACCCTACCACAGTTTTGCTTTCATGCTATTTTTCTGAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: DLLTYTSNQIKEHRV*TLPQFCFHAIFLKS Trigger: GGACTTCAGAAAAATAGCATGAAAGCAAAACTGTGGTAGGGTCAACACACGGTGCTCCTTTATTTGGTTTGAGGTGTAAGTTAATAAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661396.1 |
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| CDS TCA 72 bp | GCTGGGCTGATGATAAAACATCTTTGGATATCCAACTaGGATTTTCTTGGGTATAATGACAGTTCCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: AGLMIKHLWISN*DFLGYNDSSSF Trigger: GAAAGAGGAACTGTCATTATACCCAAGAAAATCTCAGTTGGATATCCAAAGATGTTTTATCATCAGCCCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000452787.2 ENST00000653867.1 |
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| CDS CAA 90 bp | TCCAGCATCTTATCAGTTCCTTTGGATCAAATTCTTGCTTGTGAATaGTCTTATCAAGCATTTTGCACATGTTTATCTCTAACCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SSILSVPLDQILACE*SYQAFCTCLSLTWW Trigger: CCACCAGGTTAGAGATAAACATGTGCAAAATGCTTGATAAGACAATTCACAAGCAAGAATTTGATCCAAAGGAACTGATAAGATGCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000663258.1 |
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| CDS CAA 72 bp | TCTCCAGCATCTTATCAGTTCCTTTGGATCAAATTCTaGCTTGTGAATTGTCTTATCAAGCATTTTGCACAT | + |
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Preference number: 6 (lower is better) Translates to: SPASYQFLWIKF*LVNCLIKHFAH Trigger: ATGTGCAAAATGCTTGATAAGACAATTCACAAGCAAGAATTTGATCCAAAGGAACTGATAAGATGCTGGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452787.2 ENST00000653867.1 ENST00000663258.1 |
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| CDS TCA 72 bp | CTGTTACTGATGATAAAACATCTTTGGATATCCAACTaGGATTTTCTTGGGTATAATGACAGTTCCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LLLMIKHLWISN*DFLGYNDSSSF Trigger: GAAAGAGGAACTGTCATTATACCCAAGAAAATCTCAGTTGGATATCCAAAGATGTTTTATCATCAGTAACAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663258.1 |
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