Pregenerated sensors for LINC01791 (Homo sapiens)
Ensembl gene IDs: ENSG00000267777Ensembl transcript IDs: ENST00000589511.1, ENST00000654096.1, ENST00000655296.1, ENST00000655851.1, ENST00000658745.1, ENST00000658988.1, ENST00000659241.1, ENST00000659731.1, ENST00000660210.1, ENST00000660315.1, ENST00000661073.1, ENST00000666238.1, ENST00000667120.1, ENST00000670066.1, ENST00000670562.1, ENST00000671470.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTTGTGGCTTGCTGGGCAGAGGAGACGCAGTGCACCTTGCAGCGCTaGACAGGGCACCAGGCAATGTGTGGAACAAGGTTTCCATGCCTG | + |
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Preference number: 5 (lower is better) Translates to: LVACWAEETQCTLQR*TGHQAMCGTRFPCL Trigger: CAGGCATGGAAACCTTGTTCCACACATTGCCTGGTGCCCTGTCCAGCGCTGCAAGGTGCACTGCGTCTCCTCTGCCCAGCAAGCCACAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670562.1 |
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| CDS CCA 90 bp | CTTGTGGCTTGCTGGGCAGAGGAGACGCAGTGCACCTTGCAGCGCTaGACAGGGCACCAGGCAATGTGTGGAACAAGGTTTCCATGCCTT | + |
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Preference number: 5 (lower is better) Translates to: LVACWAEETQCTLQR*TGHQAMCGTRFPCL Trigger: AAGGCATGGAAACCTTGTTCCACACATTGCCTGGTGCCCTGTCCAGCGCTGCAAGGTGCACTGCGTCTCCTCTGCCCAGCAAGCCACAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000589511.1 ENST00000655296.1 ENST00000658745.1 ENST00000659241.1 ENST00000660315.1 ENST00000661073.1 ENST00000667120.1 ENST00000671470.1 |
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| CDS CCA 90 bp | TATGCAGCAGGCCACAGACTACGTCCTACGGGGCTCAAGACCAGCTaGCCCAGGTCAAGACCTGGGTACAGAACCTATTGCATTCCACAT | + |
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Preference number: 5 (lower is better) Translates to: YAAGHRLRPTGLKTS*PRSRPGYRTYCIPH Trigger: ATGTGGAATGCAATAGGTTCTGTACCCAGGTCTTGACCTGGGCCAGCTGGTCTTGAGCCCCGTAGGACGTAGTCTGTGGCCTGCTGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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| CDS CCA 90 bp | GCTGAGTCTGCCCCAGATGGAGGGTCGGGCAGTCATTCCTCTCTTTaGAATGGCAGTGAAGGACTGGAAACAAATGGCAGACTCCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: AESAPDGGSGSHSSL*NGSEGLETNGRLQV Trigger: AACCTGGAGTCTGCCATTTGTTTCCAGTCCTTCACTGCCATTCCAAAGAGAGGAATGACTGCCCGACCCTCCATCTGGGGCAGACTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655851.1 ENST00000659241.1 |
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| CDS CCA 90 bp | ACTACGTCCTACGGGGCTCAAGACCAGCTGGCCCAGGTCAAGACCTaGGTACAGAACCTATTGCATTCCACATGGCCAAGGTATACTGAA | + |
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Preference number: 5 (lower is better) Translates to: TTSYGAQDQLAQVKT*VQNLLHSTWPRYTE Trigger: TTCAGTATACCTTGGCCATGTGGAATGCAATAGGTTCTGTACCCAGGTCTTGACCTGGGCCAGCTGGTCTTGAGCCCCGTAGGACGTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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| CDS GCA 90 bp | CTCAAGACCAGCTGGCCCAGGTCAAGACCTGGGTACAGAACCTATTaGATTCCACATGGCCAAGGTATACTGAAAGGCACAGAGGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: LKTSWPRSRPGYRTY*IPHGQGILKGTEGN Trigger: ATTCCCCTCTGTGCCTTTCAGTATACCTTGGCCATGTGGAATGCAATAGGTTCTGTACCCAGGTCTTGACCTGGGCCAGCTGGTCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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| CDS GCA 90 bp | CTTCTTTTAACATTTCTTGCAAGGCAGGTCAGGGAGGTGCTTGTCTaGAAGTCAGGAAGAGAGCCCTCACCCGAACCTGATCATGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: LLLTFLARQVREVLV*KSGREPSPEPDHAV Trigger: GACAGCATGATCAGGTTCGGGTGAGGGCTCTCTTCCTGACTTGCAGACAAGCACCTCCCTGACCTGCCTTGCAAGAAATGTTAAAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671470.1 |
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| CDS CCA 90 bp | GAGGGTCGGGCAGTCATTCCTCTCTTTGGAATGGCAGTGAAGGACTaGAAACAAATGGCAGACTCCAGGTTGAGACTCATCTTCACATGG | + |
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Preference number: 5 (lower is better) Translates to: EGRAVIPLFGMAVKD*KQMADSRLRLIFTW Trigger: CCATGTGAAGATGAGTCTCAACCTGGAGTCTGCCATTTGTTTCCAGTCCTTCACTGCCATTCCAAAGAGAGGAATGACTGCCCGACCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655851.1 ENST00000659241.1 |
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| CDS TCA 90 bp | CCCTTTAGAGATGCAGTTGAAAACCCTCAGCACACAATCTCGGAATaGGACAAGGGTGGAATTCTGGCAGCCTGTGTTCAACTCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: PFRDAVENPQHTISE*DKGGILAACVQLLL Trigger: CAGCAAGAGTTGAACACAGGCTGCCAGAATTCCACCCTTGTCTCATTCCGAGATTGTGTGCTGAGGGTTTTCAACTGCATCTCTAAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660210.1 ENST00000660315.1 |
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| CDS TCA 90 bp | GTGCCAAAAGACGTTGAGCTTGCTGGTGGAAGCCAGTGTCTCCTCTaGCCCTTTGAGTTAGTCATGATAATACGCTTCAATCTTCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: VPKDVELAGGSQCLL*PFELVMIIRFNLQS Trigger: GCTCTGAAGATTGAAGCGTATTATCATGACTAACTCAAAGGGTCAGAGGAGACACTGGCTTCCACCAGCAAGCTCAACGTCTTTTGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655296.1 ENST00000658988.1 ENST00000660210.1 |
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| CDS CCA 90 bp | ATACGCTTCAATCTTCAGAGCCTATGGTGTTTGCCATTTTCCAAGTaGAATTCAGGCGCTTTGCTCTCTCCAATTTCTAGCTTTGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: IRFNLQSLWCLPFSK*NSGALLSPISSFGS Trigger: GGAGCCAAAGCTAGAAATTGGAGAGAGCAAAGCGCCTGAATTCCACTTGGAAAATGGCAAACACCATAGGCTCTGAAGATTGAAGCGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655296.1 ENST00000658988.1 ENST00000660210.1 |
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| CDS GCA 90 bp | GCACTTCTTTTAACATTTCTTGCAAGGCAGGTCATCCTTTCCTGTTaGTCTTTCTTTGGCCTTCCCTTTAGAGATGCAGTTGAAAACCCT | + |
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Preference number: 5 (lower is better) Translates to: ALLLTFLARQVILSC*SFFGLPFRDAVENP Trigger: AGGGTTTTCAACTGCATCTCTAAAGGGAAGGCCAAAGAAAGAGCAACAGGAAAGGATGACCTGCCTTGCAAGAAATGTTAAAAGAAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654096.1 ENST00000667120.1 |
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| CDS CCA 90 bp | CCCTTTGAGTTAGTCATGATAATACGCTTCAATCTTCAGAGCCTATaGTGTTTGCCATTTTCCAAGTGGAATTCAGGCGCTTTGCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: PFELVMIIRFNLQSL*CLPFSKWNSGALLS Trigger: AGAGAGCAAAGCGCCTGAATTCCACTTGGAAAATGGCAAACACCATAGGCTCTGAAGATTGAAGCGTATTATCATGACTAACTCAAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655296.1 ENST00000658988.1 ENST00000660210.1 |
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| CDS TCA 90 bp | TTTGTAAAGATAGGGGGAAACCATGAGCAGGAGTTGTCTGAAGAATaGATCCTTATTTTAGATCCCACTGAGTCTCTCTGTCATGGACTC | + |
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Preference number: 5 (lower is better) Translates to: FVKIGGNHEQELSEE*ILILDPTESLCHGL Trigger: GAGTCCATGACAGAGAGACTCAGTGGGATCTAAAATAAGGATTCATTCTTCAGACAACTCCTGCTCATGGTTTCCCCCTATCTTTACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000654096.1 ENST00000659731.1 |
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| CDS CAA 72 bp | CTTGTGGCTTGCTGGGCAGAGGAGACGCAGTGCACCTaGCAGCGCTGGACAGGGCACCAGGCAATGTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: LVACWAEETQCT*QRWTGHQAMCG Trigger: TCCACACATTGCCTGGTGCCCTGTCCAGCGCTGCAAGGTGCACTGCGTCTCCTCTGCCCAGCAAGCCACAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000589511.1 ENST00000655296.1 ENST00000658745.1 ENST00000659241.1 ENST00000660315.1 ENST00000661073.1 ENST00000667120.1 ENST00000670562.1 ENST00000671470.1 |
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| CDS GCA 72 bp | TTGTGGCTTGCTGGGCAGAGGAGACGCAGTGCACCTTaGAGCGCTGGACAGGGCACCAGGCAATGTGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LWLAGQRRRSAP*SAGQGTRQCVE Trigger: TTCCACACATTGCCTGGTGCCCTGTCCAGCGCTGCAAGGTGCACTGCGTCTCCTCTGCCCAGCAAGCCACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000589511.1 ENST00000655296.1 ENST00000658745.1 ENST00000659241.1 ENST00000660315.1 ENST00000661073.1 ENST00000667120.1 ENST00000670562.1 ENST00000671470.1 |
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| CDS GCA 72 bp | GGCCTCCTCTTCTCCAGAGGCCTCCAGCCAGCACATTaGAGTGTTCAGAAGCTGCTCTTGGGTGCTCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: GLLFSRGLQPAH*SVQKLLLGAQG Trigger: CCCCTGAGCACCCAAGAGCAGCTTCTGAACACTGCAATGTGCTGGCTGGAGGCCTCTGGAGAAGAGGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659731.1 |
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| CDS CCA 72 bp | TGCTGGGCAGAGGAGACGCAGTGCACCTTGCAGCGCTaGACAGGGCACCAGGCAATGTGTGGAACAAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: CWAEETQCTLQR*TGHQAMCGTRF Trigger: AAACCTTGTTCCACACATTGCCTGGTGCCCTGTCCAGCGCTGCAAGGTGCACTGCGTCTCCTCTGCCCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000589511.1 ENST00000655296.1 ENST00000658745.1 ENST00000659241.1 ENST00000660315.1 ENST00000661073.1 ENST00000667120.1 ENST00000670562.1 ENST00000671470.1 |
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| CDS CCA 72 bp | CACCTTGCAGCGCTGGACAGGGCACCAGGCAATGTGTaGAACAAGGTTTCCATGCCTGTCCTTCCTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: HLAALDRAPGNV*NKVSMPVLPPR Trigger: CCTTGGAGGAAGGACAGGCATGGAAACCTTGTTCCACACATTGCCTGGTGCCCTGTCCAGCGCTGCAAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670562.1 |
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| CDS CAA 90 bp | GCCAGCTGGGGCCAGGAAGGAATGAAAGCTGCTGAGGTCACACTCTaGGTGAAAAGAGCTCTCTGGGTCCTCCCATCCCAAGTTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: ASWGQEGMKAAEVTL*VKRALWVLPSQVSG Trigger: TCCTGAAACTTGGGATGGGAGGACCCAGAGAGCTCTTTTCACCAAGAGTGTGACCTCAGCAGCTTTCATTCCTTCCTGGCCCCAGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655851.1 ENST00000659241.1 |
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| CDS TCA 72 bp | AGCTTCCATCCCCACCTCAGATGTGCCAAAAGACGTTaGGCTTGCTGGTGGAAGCCAGTGTCTCCTCTGACC | + |
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Preference number: 6 (lower is better) Translates to: SFHPHLRCAKRR*ACWWKPVSPLT Trigger: GGTCAGAGGAGACACTGGCTTCCACCAGCAAGCTCAACGTCTTTTGGCACATCTGAGGTGGGGATGGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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| CDS CAA 72 bp | CCATCCCCACCTCAGATGTGCCAAAAGACGTTGAGCTaGCTGGTGGAAGCCAGTGTCTCCTCTGACCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: PSPPQMCQKTLS*LVEASVSSDPL Trigger: CAAAGGGTCAGAGGAGACACTGGCTTCCACCAGCAAGCTCAACGTCTTTTGGCACATCTGAGGTGGGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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| CDS CAA 72 bp | CAGCTTCCATCCCCACCTCAGATGTGCCAAAAGACGTaGAGCTTGCTGGTGGAAGCCAGTGTCTCCTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: QLPSPPQMCQKT*SLLVEASVSSD Trigger: GTCAGAGGAGACACTGGCTTCCACCAGCAAGCTCAACGTCTTTTGGCACATCTGAGGTGGGGATGGAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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| CDS CAA 90 bp | AGGCTCTTGCAGCTTCCATCCCCACCTCAGATGTGCCAAAAGACGTaGAGCTTGCTGGTGGAAGCCAGTGTCTCCTCTGACCCTTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: RLLQLPSPPQMCQKT*SLLVEASVSSDPLS Trigger: ACTCAAAGGGTCAGAGGAGACACTGGCTTCCACCAGCAAGCTCAACGTCTTTTGGCACATCTGAGGTGGGGATGGAAGCTGCAAGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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| CDS TCA 72 bp | TCTTGCAAGGCAGGTCTCAGATGTGCCAAAAGACGTTaGGCTTGCTGGTGGAAGCCAGTGTCTCCTCTGACC | + |
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Preference number: 6 (lower is better) Translates to: SCKAGLRCAKRR*ACWWKPVSPLT Trigger: GGTCAGAGGAGACACTGGCTTCCACCAGCAAGCTCAACGTCTTTTGGCACATCTGAGACCTGCCTTGCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658988.1 |
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| CDS TCA 72 bp | GAGAGCCCTCACCCGAACCTGATCATGCTGTCACCCTaGTCTCCAACTTGCAGCCTCCTTAGAGCAAAAACG | + |
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Preference number: 6 (lower is better) Translates to: ESPHPNLIMLSP*SPTCSLLRAKT Trigger: CGTTTTTGCTCTAAGGAGGCTGCAAGTTGGAGATCAGGGTGACAGCATGATCAGGTTCGGGTGAGGGCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671470.1 |
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| CDS CAA 72 bp | CAAGGCAGGTCTCAGATGTGCCAAAAGACGTTGAGCTaGCTGGTGGAAGCCAGTGTCTCCTCTGACCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: QGRSQMCQKTLS*LVEASVSSDPL Trigger: CAAAGGGTCAGAGGAGACACTGGCTTCCACCAGCAAGCTCAACGTCTTTTGGCACATCTGAGACCTGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658988.1 |
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| CDS CAA 90 bp | GCTCAAGACCAGCTGGCCCAGGTCAAGACCTGGGTACAGAACCTATaGCATTCCACATGGCCAAGGTATACTGAAAGGCACAGAGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: AQDQLAQVKTWVQNL*HSTWPRYTERHRGE Trigger: TTCCCCTCTGTGCCTTTCAGTATACCTTGGCCATGTGGAATGCAATAGGTTCTGTACCCAGGTCTTGACCTGGGCCAGCTGGTCTTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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| CDS TCA 72 bp | TTGCCCTGTGAATTCCTCAGATGTGCCAAAAGACGTTaGGCTTGCTGGTGGAAGCCAGTGTCTCCTCTGACC | + |
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Preference number: 6 (lower is better) Translates to: LPCEFLRCAKRR*ACWWKPVSPLT Trigger: GGTCAGAGGAGACACTGGCTTCCACCAGCAAGCTCAACGTCTTTTGGCACATCTGAGGAATTCACAGGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655296.1 |
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| CDS CCA 72 bp | GCTGCTGAGGTCACACTCTTGGTGAAAAGAGCTCTCTaGGTCCTCCCATCCCAAGTTTCAGGAGCCATAAAC | + |
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Preference number: 6 (lower is better) Translates to: AAEVTLLVKRAL*VLPSQVSGAIN Trigger: GTTTATGGCTCCTGAAACTTGGGATGGGAGGACCCAGAGAGCTCTTTTCACCAAGAGTGTGACCTCAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655851.1 ENST00000659241.1 |
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| CDS CAA 72 bp | TTCTTGCAAGGCAGGTCTCAGATGTGCCAAAAGACGTaGAGCTTGCTGGTGGAAGCCAGTGTCTCCTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: FLQGRSQMCQKT*SLLVEASVSSD Trigger: GTCAGAGGAGACACTGGCTTCCACCAGCAAGCTCAACGTCTTTTGGCACATCTGAGACCTGCCTTGCAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658988.1 |
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| CDS CAA 72 bp | CAGCTGGCCCAGGTCAAGACCTGGGTACAGAACCTATaGCATTCCACATGGCCAAGGTATACTGAAAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: QLAQVKTWVQNL*HSTWPRYTERH Trigger: GTGCCTTTCAGTATACCTTGGCCATGTGGAATGCAATAGGTTCTGTACCCAGGTCTTGACCTGGGCCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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| CDS CAA 90 bp | TTTGGAATGGCAGTGAAGGACTGGAAACAAATGGCAGACTCCAGGTaGAGACTCATCTTCACATGGTGCTCCCTGGTGAAGCGGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: FGMAVKDWKQMADSR*RLIFTWCSLVKRAQ Trigger: CTGAGCCCGCTTCACCAGGGAGCACCATGTGAAGATGAGTCTCAACCTGGAGTCTGCCATTTGTTTCCAGTCCTTCACTGCCATTCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655851.1 ENST00000659241.1 |
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| CDS GCA 72 bp | AGCTGGCCCAGGTCAAGACCTGGGTACAGAACCTATTaGATTCCACATGGCCAAGGTATACTGAAAGGCACA | + |
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Preference number: 6 (lower is better) Translates to: SWPRSRPGYRTY*IPHGQGILKGT Trigger: TGTGCCTTTCAGTATACCTTGGCCATGTGGAATGCAATAGGTTCTGTACCCAGGTCTTGACCTGGGCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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| CDS CCA 72 bp | TCAATGTCTGCTTCAAATAACATGAAGTCCACTGGGTaGAGTGACCATCTTCCCCAGCCCTGTGGTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SMSASNNMKSTG*SDHLPQPCGSP Trigger: GGGAGAACCACAGGGCTGGGGAAGATGGTCACTCCACCCAGTGGACTTCATGTTATTTGAAGCAGACATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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| CDS CAA 72 bp | GCAGTGAAGGACTGGAAACAAATGGCAGACTCCAGGTaGAGACTCATCTTCACATGGTGCTCCCTGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: AVKDWKQMADSR*RLIFTWCSLVK Trigger: CTTCACCAGGGAGCACCATGTGAAGATGAGTCTCAACCTGGAGTCTGCCATTTGTTTCCAGTCCTTCACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655851.1 ENST00000659241.1 |
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| CDS CCA 72 bp | AAACCCTCAGCACACAATCTCGGAATGAGACAAGGGTaGAATTCTGGCAGCCTGTGTTCAACTCTTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: KPSAHNLGMRQG*NSGSLCSTLAG Trigger: TCCAGCAAGAGTTGAACACAGGCTGCCAGAATTCCACCCTTGTCTCATTCCGAGATTGTGTGCTGAGGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660210.1 ENST00000660315.1 |
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| CDS TCA 72 bp | GATGCAGTTGAAAACCCTCAGCACACAATCTCGGAATaGGACAAGGGTGGAATTCTGGCAGCCTGTGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: DAVENPQHTISE*DKGGILAACVQ Trigger: TTGAACACAGGCTGCCAGAATTCCACCCTTGTCTCATTCCGAGATTGTGTGCTGAGGGTTTTCAACTGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655851.1 ENST00000660210.1 ENST00000660315.1 |
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| CDS CCA 72 bp | GCAGTCATTCCTCTCTTTGGAATGGCAGTGAAGGACTaGAAACAAATGGCAGACTCCAGGTTGAGACTCATC | + |
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Preference number: 6 (lower is better) Translates to: AVIPLFGMAVKD*KQMADSRLRLI Trigger: GATGAGTCTCAACCTGGAGTCTGCCATTTGTTTCCAGTCCTTCACTGCCATTCCAAAGAGAGGAATGACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655851.1 ENST00000659241.1 |
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| CDS TCA 72 bp | GCTTGCTGGTGGAAGCCAGTGTCTCCTCTGACCCTTTaGGTTAGTCATGATAATACGCTTCAATCTTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: ACWWKPVSPLTL*VSHDNTLQSSE Trigger: CTCTGAAGATTGAAGCGTATTATCATGACTAACTCAAAGGGTCAGAGGAGACACTGGCTTCCACCAGCAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655296.1 ENST00000658988.1 ENST00000660210.1 |
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| CDS TCA 72 bp | GACGTTGAGCTTGCTGGTGGAAGCCAGTGTCTCCTCTaGCCCTTTGAGTTAGTCATGATAATACGCTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: DVELAGGSQCLL*PFELVMIIRFN Trigger: ATTGAAGCGTATTATCATGACTAACTCAAAGGGTCAGAGGAGACACTGGCTTCCACCAGCAAGCTCAACGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655296.1 ENST00000658988.1 ENST00000660210.1 |
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| CDS CAA 90 bp | CAGAGCCTATGGTGTTTGCCATTTTCCAAGTGGAATTCAGGCGCTTaGCTCTCTCCAATTTCTAGCTTTGGCTCCAGTTGTTCAGTAATG | + |
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Preference number: 6 (lower is better) Translates to: QSLWCLPFSKWNSGA*LSPISSFGSSCSVM Trigger: CATTACTGAACAACTGGAGCCAAAGCTAGAAATTGGAGAGAGCAAAGCGCCTGAATTCCACTTGGAAAATGGCAAACACCATAGGCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655296.1 ENST00000658988.1 ENST00000660210.1 |
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| CDS GCA 72 bp | GGTGTTTGCCATTTTCCAAGTGGAATTCAGGCGCTTTaGTCTCTCCAATTTCTAGCTTTGGCTCCAGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: GVCHFPSGIQAL*SLQFLALAPVV Trigger: AACAACTGGAGCCAAAGCTAGAAATTGGAGAGAGCAAAGCGCCTGAATTCCACTTGGAAAATGGCAAACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655296.1 ENST00000658988.1 ENST00000660210.1 |
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| CDS GCA 72 bp | AATTCTCCATTCCCCCTTCTTCTCAGCCCTTGGGAGTaGTGTTCTACTTTGTCTCTATGGCATTTTGCCTAT | + |
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Preference number: 6 (lower is better) Translates to: NSPFPLLLSPWE*CSTLSLWHFAY Trigger: ATAGGCAAAATGCCATAGAGACAAAGTAGAACAGCACTCCCAAGGGCTGAGAAGAAGGGGGAATGGAGAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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| CDS CAA 72 bp | TGGTGTTTGCCATTTTCCAAGTGGAATTCAGGCGCTTaGCTCTCTCCAATTTCTAGCTTTGGCTCCAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: WCLPFSKWNSGA*LSPISSFGSSC Trigger: ACAACTGGAGCCAAAGCTAGAAATTGGAGAGAGCAAAGCGCCTGAATTCCACTTGGAAAATGGCAAACACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655296.1 ENST00000658988.1 ENST00000660210.1 |
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| CDS CAA 90 bp | TGCAATCTTGAAAGGGTGAATTTGGACAATCGCAGCTTGGCCATTTaGAGCACATATGCTAGAACTAAGTCTTTTTGGCCCAGCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: CNLERVNLDNRSLAI*STYARTKSFWPSCS Trigger: GCTACAGCTGGGCCAAAAAGACTTAGTTCTAGCATATGTGCTCAAAATGGCCAAGCTGCGATTGTCCAAATTCACCCTTTCAAGATTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655296.1 ENST00000658988.1 ENST00000660210.1 |
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| CDS GCA 72 bp | AAAGCACTTCTTTTAACATTTCTTGCAAGGCAGGTCTaGTTAGAGCAAAAACGCCATCAGCCTCGAGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: KALLLTFLARQV*LEQKRHQPREV Trigger: CACTTCTCGAGGCTGATGGCGTTTTTGCTCTAAGCAGACCTGCCTTGCAAGAAATGTTAAAAGAAGTGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658745.1 |
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| CDS CCA 72 bp | AATCTTCAGAGCCTATGGTGTTTGCCATTTTCCAAGTaGAATTCAGGCGCTTTGCTCTCTCCAATTTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: NLQSLWCLPFSK*NSGALLSPISS Trigger: GCTAGAAATTGGAGAGAGCAAAGCGCCTGAATTCCACTTGGAAAATGGCAAACACCATAGGCTCTGAAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655296.1 ENST00000658988.1 ENST00000660210.1 |
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| CDS CCA 72 bp | GTGGAGACTTGCATGGAGACTCAAGCTTATGACAGTTaGATGCTTTTCTCCCTCAGGATGAGTTGCTTTTTA | + |
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Preference number: 6 (lower is better) Translates to: VETCMETQAYDS*MLFSLRMSCFL Trigger: TAAAAAGCAACTCATCCTGAGGGAGAAAAGCATCCAACTGTCATAAGCTTGAGTCTCCATGCAAGTCTCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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| CDS CAA 90 bp | GAGTTAGTCATGATAATACGCTTCAATCTTCAGAGCCTATGGTGTTaGCCATTTTCCAAGTGGAATTCAGGCGCTTTGCTCTCTCCAATT | + |
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Preference number: 6 (lower is better) Translates to: ELVMIIRFNLQSLWC*PFSKWNSGALLSPI Trigger: AATTGGAGAGAGCAAAGCGCCTGAATTCCACTTGGAAAATGGCAAACACCATAGGCTCTGAAGATTGAAGCGTATTATCATGACTAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655296.1 ENST00000658988.1 ENST00000660210.1 |
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| CDS CAA 72 bp | TGCAATCTTGAAAGGGTGAATTTGGACAATCGCAGCTaGGCCATTTTGAGCACATATGCTAGAACTAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: CNLERVNLDNRS*AILSTYARTKS Trigger: AGACTTAGTTCTAGCATATGTGCTCAAAATGGCCAAGCTGCGATTGTCCAAATTCACCCTTTCAAGATTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655296.1 ENST00000658988.1 ENST00000660210.1 |
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| CDS CAA 90 bp | TTGAGCACATATGCTAGAACTAAGTCTTTTTGGCCCAGCTGTAGCTaGAATCTAATGAAAATGACAGATAATGCAGTGCTCTGTGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LSTYARTKSFWPSCS*NLMKMTDNAVLCVP Trigger: AGGCACACAGAGCACTGCATTATCTGTCATTTTCATTAGATTCAAGCTACAGCTGGGCCAAAAAGACTTAGTTCTAGCATATGTGCTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655296.1 ENST00000658988.1 ENST00000660210.1 |
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| CDS CAA 90 bp | AATAGCGGAGTTGCTGGGTCATATGGTTATTCTATGTTTAATATTTaGAGGAACCCCTGTACTGTTTCCACAGTGGCTGCACTATTTTAC | + |
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Preference number: 6 (lower is better) Translates to: NSGVAGSYGYSMFNI*RNPCTVSTVAALFY Trigger: GTAAAATAGTGCAGCCACTGTGGAAACAGTACAGGGGTTCCTCAAAATATTAAACATAGAATAACCATATGACCCAGCAACTCCGCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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| CDS GCA 72 bp | AACGCCATCAGCCTCGAGAAGTGTCATAAATTAAGTTaGTATTTAAGCCCTGATTCTAGTAAAAGGGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: NAISLEKCHKLS*YLSPDSSKRVQ Trigger: TTGGACCCTTTTACTAGAATCAGGGCTTAAATAGCAACTTAATTTATGACACTTCTCGAGGCTGATGGCGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000589511.1 ENST00000655296.1 ENST00000655851.1 ENST00000658745.1 ENST00000658988.1 ENST00000659241.1 ENST00000659731.1 ENST00000660210.1 ENST00000660315.1 ENST00000661073.1 ENST00000666238.1 ENST00000670066.1 ENST00000670562.1 ENST00000671470.1 |
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| CDS CAA 72 bp | AGAAATAGTTCAGATTATCTCCGAGGCTCTTCTGCTTaGACATTTCTAGATATCTTCTTCAAGCCCCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: RNSSDYLRGSSA*TFLDIFFKPLH Trigger: GTGAAGGGGCTTGAAGAAGATATCTAGAAATGTCAAAGCAGAAGAGCCTCGGAGATAATCTGAACTATTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658988.1 ENST00000666238.1 ENST00000670066.1 |
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| CDS CAA 72 bp | TATGCTAGAACTAAGTCTTTTTGGCCCAGCTGTAGCTaGAATCTAATGAAAATGACAGATAATGCAGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: YARTKSFWPSCS*NLMKMTDNAVL Trigger: GAGCACTGCATTATCTGTCATTTTCATTAGATTCAAGCTACAGCTGGGCCAAAAAGACTTAGTTCTAGCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655296.1 ENST00000658988.1 ENST00000660210.1 |
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| CDS CAA 72 bp | GTGTACAACTCAGTGGTATTAAGTGCATTCATATTGTaGTATAATCATTACTGCCATCCATCTCCAGAATCC | + |
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Preference number: 6 (lower is better) Translates to: VYNSVVLSAFIL*YNHYCHPSPES Trigger: GGATTCTGGAGATGGATGGCAGTAATGATTATACAACAATATGAATGCACTTAATACCACTGAGTTGTACAC 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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| CDS CAA 90 bp | TATAAACTCAGAAATAGTTCAGATTATCTCCGAGGCTCTTCTGCTTaGACATTTCTAGATATCTTCTTCAAGCCCCTTCACTTATTTCTC | + |
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Preference number: 6 (lower is better) Translates to: YKLRNSSDYLRGSSA*TFLDIFFKPLHLFL Trigger: GAGAAATAAGTGAAGGGGCTTGAAGAAGATATCTAGAAATGTCAAAGCAGAAGAGCCTCGGAGATAATCTGAACTATTTCTGAGTTTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658988.1 ENST00000666238.1 ENST00000670066.1 |
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| CDS CAA 72 bp | TCTTCAATTCTTCAGGGTATAGACCCAATAGCGGAGTaGCTGGGTCATATGGTTATTCTATGTTTAATATTT | + |
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Preference number: 6 (lower is better) Translates to: SSILQGIDPIAE*LGHMVILCLIF Trigger: AAATATTAAACATAGAATAACCATATGACCCAGCAACTCCGCTATTGGGTCTATACCCTGAAGAATTGAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660210.1 |
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