Pregenerated sensors for LINC01786 (Homo sapiens)
Ensembl gene IDs: ENSG00000230415Ensembl transcript IDs: ENST00000434139.1, ENST00000453732.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 72 bp | CCGCCCACGACCCGTCCACGACCGGCACACTCAACCTaGTCCACGGAACCCCATTCCACAGCTCGGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PPTTRPRPAHST*STEPHSTARFL Trigger: GAGGAACCGAGCTGTGGAATGGGGTTCCGTGGAGCAGGTTGAGTGTGCCGGTCGTGGACGGGTCGTGGGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453732.1 |
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| CDS CCA 72 bp | GTTCCAGAAGGCCACAGATGCGGGTGGGTGGGGTGGTaGGGTCTTGGCAAGACGTGCTGGCCACACCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VPEGHRCGWVGW*GLGKTCWPHLS Trigger: GGACAGGTGTGGCCAGCACGTCTTGCCAAGACCCCACCACCCCACCCACCCGCATCTGTGGCCTTCTGGAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434139.1 |
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| CDS CCA 72 bp | TCGGTTCCAGAAGGCCACAGATGCGGGTGGGTGGGGTaGTGGGGTCTTGGCAAGACGTGCTGGCCACACCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVPEGHRCGWVG*WGLGKTCWPHL Trigger: CAGGTGTGGCCAGCACGTCTTGCCAAGACCCCACCACCCCACCCACCCGCATCTGTGGCCTTCTGGAACCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434139.1 |
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| CDS GCA 72 bp | CTGCTCCACGGAACCCCAGTTCCTCCATACTCAACCTaGTCCACGGAACCCCAGGCCACAGCTCAGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLHGTPVPPYST*STEPQATAQFL Trigger: GAGGAACTGAGCTGTGGCCTGGGGTTCCGTGGAGCAGGTTGAGTATGGAGGAACTGGGGTTCCGTGGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453732.1 |
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| CDS CAA 72 bp | CCAGGAAATGCACATAGGAGCTGGTCACTCTGTGTTTaGAGTCCTCTCGGAGGTGTTGGACTTCTAGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: PGNAHRSWSLCV*SPLGGVGLLER Trigger: TCTCTCTAGAAGTCCAACACCTCCGAGAGGACTCAAAACACAGAGTGACCAGCTCCTATGTGCATTTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453732.1 |
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