Pregenerated sensors for LINC01782 (Homo sapiens)
Ensembl gene IDs: ENSG00000267204Ensembl transcript IDs: ENST00000591212.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCCTCTGGGATCCGCCCACCCTAGCAATGGGTCCAGGTGGGAGATaGGTCATGGAGATATGGCTGGCCCAGGTCAGGCAGTTGAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: GLWDPPTLAMGPGGR*VMEIWLAQVRQLKW Trigger: CCATTTCAACTGCCTGACCTGGGCCAGCCATATCTCCATGACCCATCTCCCACCTGGACCCATTGCTAGGGTGGGCGGATCCCAGAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS GCA 90 bp | AGGGATGGGGTGATACTGTGGCCTGCAGTTCCATCTGTGAGCCTCTaGCTTGGGTGGCCTGAGGTCGGGAGTTCAAGACCATCCTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RDGVILWPAVPSVSL*LGWPEVGSSRPSWP Trigger: TGGCCAGGATGGTCTTGAACTCCCGACCTCAGGCCACCCAAGGCAGAGGCTCACAGATGGAACTGCAGGCCACAGTATCACCCCATCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS TCA 90 bp | GAGCTCGGGCATGAGTCCTGTCCCGACAAGAAGAGGCAGCTGGTCTaGCTAGTCCACCACCATCCTCAGAGCCTGGACACACACAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: ELGHESCPDKKRQLV*LVHHHPQSLDTHNK Trigger: CTTGTTGTGTGTGTCCAGGCTCTGAGGATGGTGGTGGACTAGTCAGACCAGCTGCCTCTTCTTGTCGGGACAGGACTCATGCCCGAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CCA 90 bp | AAAGAGAAAAAGGCCAGTCATGCAGAAATCCAACAGCCTGGCCTCTaGGATCCGCCCACCCTAGCAATGGGTCCAGGTGGGAGATGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KEKKASHAEIQQPGL*DPPTLAMGPGGRWV Trigger: GACCCATCTCCCACCTGGACCCATTGCTAGGGTGGGCGGATCCCAGAGGCCAGGCTGTTGGATTTCTGCATGACTGGCCTTTTTCTCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CCA 90 bp | AAACTGCAAAGAGAAAAAGGCCAGTCATGCAGAAATCCAACAGCCTaGCCTCTGGGATCCGCCCACCCTAGCAATGGGTCCAGGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KLQREKGQSCRNPTA*PLGSAHPSNGSRWE Trigger: CTCCCACCTGGACCCATTGCTAGGGTGGGCGGATCCCAGAGGCCAGGCTGTTGGATTTCTGCATGACTGGCCTTTTTCTCTTTGCAGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS GCA 90 bp | AAACACTTGGCACCCATTGGCTCTTCCCCAAATGGCTATCAGAATTaGAGTTTCAGCCACCAGCAGCTCTCCGATGGGCACAGGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KHLAPIGSSPNGYQN*SFSHQQLSDGHRLH Trigger: GTGGAGCCTGTGCCCATCGGAGAGCTGCTGGTGGCTGAAACTGCAATTCTGATAGCCATTTGGGGAAGAGCCAATGGGTGCCAAGTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS GCA 90 bp | AGAGGAAAACACCCCTTTATCTGCACGTGTCTCCACCACTGCAATTaGTGGAAGCTCCACGAGTGCCCTCGGTGCACAGATGTGCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: RGKHPFICTCLHHCN*WKLHECPRCTDVLY Trigger: GTAAAGCACATCTGTGCACCGAGGGCACTCGTGGAGCTTCCAGCAATTGCAGTGGTGGAGACACGTGCAGATAAAGGGGTGTTTTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS GCA 90 bp | AAACAGAGAGGAAAACACCCCTTTATCTGCACGTGTCTCCACCACTaGAATTGCTGGAAGCTCCACGAGTGCCCTCGGTGCACAGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: KQRGKHPFICTCLHH*NCWKLHECPRCTDV Trigger: CACATCTGTGCACCGAGGGCACTCGTGGAGCTTCCAGCAATTGCAGTGGTGGAGACACGTGCAGATAAAGGGGTGTTTTCCTCTCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CCA 90 bp | GGAAAACACCCCTTTATCTGCACGTGTCTCCACCACTGCAATTGCTaGAAGCTCCACGAGTGCCCTCGGTGCACAGATGTGCTTTACAAC | + |
|
Preference number: 5 (lower is better) Translates to: GKHPFICTCLHHCNC*KLHECPRCTDVLYN Trigger: GTTGTAAAGCACATCTGTGCACCGAGGGCACTCGTGGAGCTTCCAGCAATTGCAGTGGTGGAGACACGTGCAGATAAAGGGGTGTTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS TCA 90 bp | AATGCCACTATCTTTCAACTTTCTCCACCAACAGGGTCAGGCTGTTaGTTGGCCTCGACTGCAGTTAGCCTGACACGGCTAGCAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NATIFQLSPPTGSGC*LASTAVSLTRLAAS Trigger: TGAGGCTGCTAGCCGTGTCAGGCTAACTGCAGTCGAGGCCAATCAACAGCCTGACCCTGTTGGTGGAGAAAGTTGAAAGATAGTGGCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS GCA 90 bp | TCTGATGTCCCGACAATTAAACTGCAAAGAGAAAAAGGCCAGTCATaGAGAAATCCAACAGCCTGGCCTCTGGGATCCGCCCACCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SDVPTIKLQREKGQS*RNPTAWPLGSAHPS Trigger: GCTAGGGTGGGCGGATCCCAGAGGCCAGGCTGTTGGATTTCTGCATGACTGGCCTTTTTCTCTTTGCAGTTTAATTGTCGGGACATCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS TCA 90 bp | CTAGCAGCCTCAAAACAAATTAAACGAGGCAGGGATGCCGTGCAGTaGTCGTTCCATTATGTCCCCTCTGCTTCCACACGTGACTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LAASKQIKRGRDAVQ*SFHYVPSASTRDSH Trigger: GTGTGAGTCACGTGTGGAAGCAGAGGGGACATAATGGAACGATCACTGCACGGCATCCCTGCCTCGTTTAATTTGTTTTGAGGCTGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS GCA 90 bp | ATCTGCACGTGTCTCCACCACTGCAATTGCTGGAAGCTCCACGAGTaGCCTCGGTGCACAGATGTGCTTTACAACAGAGTGACTGTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ICTCLHHCNCWKLHE*PRCTDVLYNRVTVN Trigger: ATTTACAGTCACTCTGTTGTAAAGCACATCTGTGCACCGAGGGCACTCGTGGAGCTTCCAGCAATTGCAGTGGTGGAGACACGTGCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CCA 90 bp | AAATGGCTATCAGAATTGCAGTTTCAGCCACCAGCAGCTCTCCGATaGGCACAGGCTCCACTTATGGCTGGTTTGGAATGGCAAATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KWLSELQFQPPAALR*AQAPLMAGLEWQIH Trigger: ATGGATTTGCCATTCCAAACCAGCCATAAGTGGAGCCTGTGCCCATCGGAGAGCTGCTGGTGGCTGAAACTGCAATTCTGATAGCCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS TCA 90 bp | TATATACATTCTCCTTGCAAACTGATCAGAAACAGAGCTCGGGCATaGGTCCTGTCCCGACAAGAAGAGGCAGCTGGTCTGACTAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YIHSPCKLIRNRARA*VLSRQEEAAGLTSP Trigger: TGGACTAGTCAGACCAGCTGCCTCTTCTTGTCGGGACAGGACTCATGCCCGAGCTCTGTTTCTGATCAGTTTGCAAGGAGAATGTATATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS TCA 90 bp | CTCGTGGTAAGTGGCAATGTGGGTATATACATTCTCCTTGCAAACTaGTCAGAAACAGAGCTCGGGCATGAGTCCTGTCCCGACAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LVVSGNVGIYILLAN*SETELGHESCPDKK Trigger: CTTCTTGTCGGGACAGGACTCATGCCCGAGCTCTGTTTCTGATCAGTTTGCAAGGAGAATGTATATACCCACATTGCCACTTACCACGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS TCA 90 bp | GTGCCCTCGGTGCACAGATGTGCTTTACAACAGAGTGACTGTAAATaGGAAAACACTAAGTTAGGCTCTGACGGCCAATGCTGGATGTAT | + |
|
Preference number: 5 (lower is better) Translates to: VPSVHRCALQQSDCK*ENTKLGSDGQCWMY Trigger: ATACATCCAGCATTGGCCGTCAGAGCCTAACTTAGTGTTTTCTCATTTACAGTCACTCTGTTGTAAAGCACATCTGTGCACCGAGGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS TCA 90 bp | TCCCCTCTGCTTCCACACGTGACTCACACTATCACTTTTAGAAGGTaGAGCATCTTATTGAATCAACACCTAATCTGCACACAGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SPLLPHVTHTITFRR*SILLNQHLICTQCH Trigger: GTGACACTGTGTGCAGATTAGGTGTTGATTCAATAAGATGCTTCACCTTCTAAAAGTGATAGTGTGAGTCACGTGTGGAAGCAGAGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CCA 72 bp | GATCCGCCCACCCTAGCAATGGGTCCAGGTGGGAGATaGGTCATGGAGATATGGCTGGCCCAGGTCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: DPPTLAMGPGGR*VMEIWLAQVRQ Trigger: CTGCCTGACCTGGGCCAGCCATATCTCCATGACCCATCTCCCACCTGGACCCATTGCTAGGGTGGGCGGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS TCA 72 bp | CATGAGTCCTGTCCCGACAAGAAGAGGCAGCTGGTCTaGCTAGTCCACCACCATCCTCAGAGCCTGGACACA | + |
|
Preference number: 6 (lower is better) Translates to: HESCPDKKRQLV*LVHHHPQSLDT Trigger: TGTGTCCAGGCTCTGAGGATGGTGGTGGACTAGTCAGACCAGCTGCCTCTTCTTGTCGGGACAGGACTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS GCA 72 bp | CACCCCTTTATCTGCACGTGTCTCCACCACTGCAATTaGTGGAAGCTCCACGAGTGCCCTCGGTGCACAGAT | + |
|
Preference number: 6 (lower is better) Translates to: HPFICTCLHHCN*WKLHECPRCTD Trigger: ATCTGTGCACCGAGGGCACTCGTGGAGCTTCCAGCAATTGCAGTGGTGGAGACACGTGCAGATAAAGGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS GCA 72 bp | GGAAAACACCCCTTTATCTGCACGTGTCTCCACCACTaGAATTGCTGGAAGCTCCACGAGTGCCCTCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GKHPFICTCLHH*NCWKLHECPRC Trigger: GCACCGAGGGCACTCGTGGAGCTTCCAGCAATTGCAGTGGTGGAGACACGTGCAGATAAAGGGGTGTTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CCA 72 bp | AGAGAAAAAGGCCAGTCATGCAGAAATCCAACAGCCTaGCCTCTGGGATCCGCCCACCCTAGCAATGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: REKGQSCRNPTA*PLGSAHPSNGS Trigger: GGACCCATTGCTAGGGTGGGCGGATCCCAGAGGCCAGGCTGTTGGATTTCTGCATGACTGGCCTTTTTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CCA 72 bp | CCCTTTATCTGCACGTGTCTCCACCACTGCAATTGCTaGAAGCTCCACGAGTGCCCTCGGTGCACAGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: PFICTCLHHCNC*KLHECPRCTDV Trigger: CACATCTGTGCACCGAGGGCACTCGTGGAGCTTCCAGCAATTGCAGTGGTGGAGACACGTGCAGATAAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CCA 72 bp | CCAGGTGTGGTGGCAGGCACCGTAAACCCAGCTACTTaGGAAGTCAAGGCGGGAGAATCACTTGAATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGVVAGTVNPAT*EVKAGESLESR Trigger: CCTGGATTCAAGTGATTCTCCCGCCTTGACTTCCCAAGTAGCTGGGTTTACGGTGCCTGCCACCACACCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CAA 72 bp | ACACCCCTTTATCTGCACGTGTCTCCACCACTGCAATaGCTGGAAGCTCCACGAGTGCCCTCGGTGCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: TPLYLHVSPPLQ*LEAPRVPSVHR Trigger: TCTGTGCACCGAGGGCACTCGTGGAGCTTCCAGCAATTGCAGTGGTGGAGACACGTGCAGATAAAGGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS GCA 72 bp | GCACCCATTGGCTCTTCCCCAAATGGCTATCAGAATTaGAGTTTCAGCCACCAGCAGCTCTCCGATGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: APIGSSPNGYQN*SFSHQQLSDGH Trigger: GTGCCCATCGGAGAGCTGCTGGTGGCTGAAACTGCAATTCTGATAGCCATTTGGGGAAGAGCCAATGGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CCA 72 bp | GCAATGGGTCCAGGTGGGAGATGGGTCATGGAGATATaGCTGGCCCAGGTCAGGCAGTTGAAATGGAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AMGPGGRWVMEI*LAQVRQLKWKL Trigger: CAACTTCCATTTCAACTGCCTGACCTGGGCCAGCCATATCTCCATGACCCATCTCCCACCTGGACCCATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CAA 72 bp | GGCACCCATTGGCTCTTCCCCAAATGGCTATCAGAATaGCAGTTTCAGCCACCAGCAGCTCTCCGATGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GTHWLFPKWLSE*QFQPPAALRWA Trigger: TGCCCATCGGAGAGCTGCTGGTGGCTGAAACTGCAATTCTGATAGCCATTTGGGGAAGAGCCAATGGGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CAA 90 bp | GTCATGGAGATATGGCTGGCCCAGGTCAGGCAGTTGAAATGGAAGTaGAGAGCCTCCAGGCTCCAGAAGGCACCAGAGAGAGAAGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VMEIWLAQVRQLKWK*RASRLQKAPEREAK Trigger: CTTTGCTTCTCTCTCTGGTGCCTTCTGGAGCCTGGAGGCTCTCAACTTCCATTTCAACTGCCTGACCTGGGCCAGCCATATCTCCATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS TCA 72 bp | TCTCCTTGCAAACTGATCAGAAACAGAGCTCGGGCATaGGTCCTGTCCCGACAAGAAGAGGCAGCTGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SPCKLIRNRARA*VLSRQEEAAGL Trigger: CAGACCAGCTGCCTCTTCTTGTCGGGACAGGACTCATGCCCGAGCTCTGTTTCTGATCAGTTTGCAAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS TCA 72 bp | AGACTTCGCTGGAGACAGGCTGGGTGGGGGCGAAGATaGATTGTGAGGAACCCTGACCCTATTTCAGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: RLRWRQAGWGRR*IVRNPDPISGK Trigger: CTTACCTGAAATAGGGTCAGGGTTCCTCACAATTCATCTTCGCCCCCACCCAGCCTGTCTCCAGCGAAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS GCA 72 bp | TGTCTCCACCACTGCAATTGCTGGAAGCTCCACGAGTaGCCTCGGTGCACAGATGTGCTTTACAACAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: CLHHCNCWKLHE*PRCTDVLYNRV Trigger: CACTCTGTTGTAAAGCACATCTGTGCACCGAGGGCACTCGTGGAGCTTCCAGCAATTGCAGTGGTGGAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CCA 72 bp | TCAGAATTGCAGTTTCAGCCACCAGCAGCTCTCCGATaGGCACAGGCTCCACTTATGGCTGGTTTGGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: SELQFQPPAALR*AQAPLMAGLEW Trigger: CCATTCCAAACCAGCCATAAGTGGAGCCTGTGCCCATCGGAGAGCTGCTGGTGGCTGAAACTGCAATTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CAA 72 bp | GAACATGGCTCTCCCAAGGGGAGACAGGAACGGATGTaGACTTCATCCCAGCAGCTTCTGACACAATGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: EHGSPKGRQERM*TSSQQLLTQCH Trigger: GTGGCATTGTGTCAGAAGCTGCTGGGATGAAGTCAACATCCGTTCCTGTCTCCCCTTGGGAGAGCCATGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CAA 90 bp | GAGAGGAAAACACCCCTTTATCTGCACGTGTCTCCACCACTGCAATaGCTGGAAGCTCCACGAGTGCCCTCGGTGCACAGATGTGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: ERKTPLYLHVSPPLQ*LEAPRVPSVHRCAL Trigger: TAAAGCACATCTGTGCACCGAGGGCACTCGTGGAGCTTCCAGCAATTGCAGTGGTGGAGACACGTGCAGATAAAGGGGTGTTTTCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CAA 90 bp | TCTCCTTTTTCCAGTCCACCCAACACAAGCTGGGTTGCTGAACCTTaGCAACTCAAGCACTTAGGCAACGCTGAAAAGCCGAGCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SPFSSPPNTSWVAEP*QLKHLGNAEKPSFL Trigger: GAGGAAGCTCGGCTTTTCAGCGTTGCCTAAGTGCTTGAGTTGCAAAGGTTCAGCAACCCAGCTTGTGTTGGGTGGACTGGAAAAAGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CAA 90 bp | TTTGCCCTGGAACATGGCTCTCCCAAGGGGAGACAGGAACGGATGTaGACTTCATCCCAGCAGCTTCTGACACAATGCCACTATCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FALEHGSPKGRQERM*TSSQQLLTQCHYLS Trigger: TGAAAGATAGTGGCATTGTGTCAGAAGCTGCTGGGATGAAGTCAACATCCGTTCCTGTCTCCCCTTGGGAGAGCCATGTTCCAGGGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS TCA 72 bp | ATCTTTCAACTTTCTCCACCAACAGGGTCAGGCTGTTaGTTGGCCTCGACTGCAGTTAGCCTGACACGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: IFQLSPPTGSGC*LASTAVSLTRL Trigger: TAGCCGTGTCAGGCTAACTGCAGTCGAGGCCAATCAACAGCCTGACCCTGTTGGTGGAGAAAGTTGAAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS GCA 72 bp | CACTGCAATTGCTGGAAGCTCCACGAGTGCCCTCGGTaGACAGATGTGCTTTACAACAGAGTGACTGTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: HCNCWKLHECPR*TDVLYNRVTVN Trigger: ATTTACAGTCACTCTGTTGTAAAGCACATCTGTGCACCGAGGGCACTCGTGGAGCTTCCAGCAATTGCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS GCA 72 bp | CAGCCTCAAAACAAATTAAACGAGGCAGGGATGCCGTaGAGTGATCGTTCCATTATGTCCCCTCTGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QPQNKLNEAGMP*SDRSIMSPLLP Trigger: TGGAAGCAGAGGGGACATAATGGAACGATCACTGCACGGCATCCCTGCCTCGTTTAATTTGTTTTGAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS TCA 72 bp | AGTGGCAATGTGGGTATATACATTCTCCTTGCAAACTaGTCAGAAACAGAGCTCGGGCATGAGTCCTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SGNVGIYILLAN*SETELGHESCP Trigger: GGGACAGGACTCATGCCCGAGCTCTGTTTCTGATCAGTTTGCAAGGAGAATGTATATACCCACATTGCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS TCA 72 bp | TCAAAACAAATTAAACGAGGCAGGGATGCCGTGCAGTaGTCGTTCCATTATGTCCCCTCTGCTTCCACACGT | + |
|
Preference number: 6 (lower is better) Translates to: SKQIKRGRDAVQ*SFHYVPSASTR Trigger: ACGTGTGGAAGCAGAGGGGACATAATGGAACGATCACTGCACGGCATCCCTGCCTCGTTTAATTTGTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CAA 90 bp | CTAGGAGACAGAGTGAGACTCTCACCATCAGTGATGCAGATGTACTaGTCACATCATAAACACTTGGCACCCATTGGCTCTTCCCCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LGDRVRLSPSVMQMY*SHHKHLAPIGSSPN Trigger: ATTTGGGGAAGAGCCAATGGGTGCCAAGTGTTTATGATGTGACAAGTACATCTGCATCACTGATGGTGAGAGTCTCACTCTGTCTCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CAA 90 bp | CTCTCACCATCAGTGATGCAGATGTACTTGTCACATCATAAACACTaGGCACCCATTGGCTCTTCCCCAAATGGCTATCAGAATTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LSPSVMQMYLSHHKH*APIGSSPNGYQNCS Trigger: ACTGCAATTCTGATAGCCATTTGGGGAAGAGCCAATGGGTGCCAAGTGTTTATGATGTGACAAGTACATCTGCATCACTGATGGTGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS TCA 72 bp | GTGATCGTTCCATTATGTCCCCTCTGCTTCCACACGTaGCTCACACTATCACTTTTAGAAGGTGAAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: VIVPLCPLCFHT*LTLSLLEGEAS Trigger: AGATGCTTCACCTTCTAAAAGTGATAGTGTGAGTCACGTGTGGAAGCAGAGGGGACATAATGGAACGATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS GCA 72 bp | GGACACGCAATAGCAGTTAGTTCAAAAGATAACAGCTaGAATACCTCACCTCTCCATTCAGCACTACAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GHAIAVSSKDNS*NTSPLHSALQS Trigger: GCTCTGTAGTGCTGAATGGAGAGGTGAGGTATTGCAGCTGTTATCTTTTGAACTAACTGCTATTGCGTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CAA 72 bp | TCAGTGATGCAGATGTACTTGTCACATCATAAACACTaGGCACCCATTGGCTCTTCCCCAAATGGCTATCAG | + |
|
Preference number: 6 (lower is better) Translates to: SVMQMYLSHHKH*APIGSSPNGYQ Trigger: CTGATAGCCATTTGGGGAAGAGCCAATGGGTGCCAAGTGTTTATGATGTGACAAGTACATCTGCATCACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CAA 72 bp | AGAGTGAGACTCTCACCATCAGTGATGCAGATGTACTaGTCACATCATAAACACTTGGCACCCATTGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RVRLSPSVMQMY*SHHKHLAPIGS Trigger: AGAGCCAATGGGTGCCAAGTGTTTATGATGTGACAAGTACATCTGCATCACTGATGGTGAGAGTCTCACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS CAA 72 bp | AGATGTACTTGTCACATCATAAACACTTGGCACCCATaGGCTCTTCCCCAAATGGCTATCAGAATTGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RCTCHIINTWHP*ALPQMAIRIAV Trigger: AACTGCAATTCTGATAGCCATTTGGGGAAGAGCCAATGGGTGCCAAGTGTTTATGATGTGACAAGTACATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||
| CDS TCA 72 bp | CTTCCACACGTGACTCACACTATCACTTTTAGAAGGTaGAGCATCTTATTGAATCAACACCTAATCTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: LPHVTHTITFRR*SILLNQHLICT Trigger: TGTGCAGATTAGGTGTTGATTCAATAAGATGCTTCACCTTCTAAAAGTGATAGTGTGAGTCACGTGTGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591212.1 |
||