Pregenerated sensors for LINC01781 (Homo sapiens)

Ensembl gene IDs: ENSG00000234184

Ensembl transcript IDs: ENST00000418041.5, ENST00000443104.5, ENST00000443565.1, ENST00000659969.1

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AGTTACATTGGCCCAAGGTATGGGGTGGCACATGTTATGGTTAACTaGTTAGTACAGAGCCTCTTGACATACAGACATTTTTCTGTTACT	+
Preference number: 5 (lower is better) Translates to: SYIGPRYGVAHVMVN*LVQSLLTYRHFSVT Trigger: AGTAACAGAAAAATGTCTGTATGTCAAGAGGCTCTGTACTAATCAGTTAACCATAACATGTGCCACCCCATACCTTGGGCCAATGTAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000418041.5 ENST00000443104.5 ENST00000443565.1 ENST00000659969.1
CDS GCA 90 bp	TACATGGTGGAACCCCATCTCTTATTTATCATGTATTTCCATCAGTaGTTTATTTTCGACCTTTCCTTCTTGACAAACGCTGTCAGGAAA	+
Preference number: 5 (lower is better) Translates to: YMVEPHLLFIMYFHQ*FIFDLSFLTNAVRK Trigger: TTTCCTGACAGCGTTTGTCAAGAAGGAAAGGTCGAAAATAAAGCACTGATGGAAATACATGATAAATAAGAGATGGGGTTCCACCATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443104.5
CDS TCA 72 bp	AGACCAGCCGGGGCTACATGGTGGAACCCCATCTCTTaGCAAACGCTGTCAGGAAACACCACATTTATTTCA	+
Preference number: 6 (lower is better) Translates to: RPAGATWWNPIS*QTLSGNTTFIS Trigger: TGAAATAAATGTGGTGTTTCCTGACAGCGTTTGTCAAGAGATGGGGTTCCACCATGTAGCCCCGGCTGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418041.5
CDS TCA 72 bp	AAGCAGGGAATCTCTGCAAGGCTAGAGTATCAAGCTTaGGTGCTTCCCACCCTCAGCTTGAATCCAAGTTCC	+
Preference number: 6 (lower is better) Translates to: KQGISARLEYQA*VLPTLSLNPSS Trigger: GGAACTTGGATTCAAGCTGAGGGTGGGAAGCACTCAAGCTTGATACTCTAGCCTTGCAGAGATTCCCTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659969.1
CDS TCA 72 bp	GGCCCAAGGTATGGGGTGGCACATGTTATGGTTAACTaGTTAGTACAGAGCCTCTTGACATACAGACATTTT	+
Preference number: 6 (lower is better) Translates to: GPRYGVAHVMVN*LVQSLLTYRHF Trigger: AAAATGTCTGTATGTCAAGAGGCTCTGTACTAATCAGTTAACCATAACATGTGCCACCCCATACCTTGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000418041.5 ENST00000443104.5 ENST00000443565.1 ENST00000659969.1

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