RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01779 (Homo sapiens)

Ensembl gene IDs: ENSG00000235933

Ensembl transcript IDs: ENST00000426515.1

Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CCTGGAGAGGTCCCCATGGACCATTGCTGGCCATGCCCAGAGAGCTaGCCCGGAACCAGGGGTGTTCTGCAGCTGGTCACCCATAGCTTA +
Preference number: 5 (lower is better)
Translates to: PGEVPMDHCWPCPES*PGTRGVLQLVTHSL
Trigger: TAAGCTATGGGTGACCAGCTGCAGAACACCCCTGGTTCCGGGCCAGCTCTCTGGGCATGGCCAGCAATGGTCCATGGGGACCTCTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS GCA 90 bp AGCACGTTTGGACTGAGTGTTCCTGGAGAGGTCCCCATGGACCATTaGTGGCCATGCCCAGAGAGCTGGCCCGGAACCAGGGGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: STFGLSVPGEVPMDH*WPCPESWPGTRGVL
Trigger: CAGAACACCCCTGGTTCCGGGCCAGCTCTCTGGGCATGGCCAGCAATGGTCCATGGGGACCTCTCCAGGAACACTCAGTCCAAACGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CCA 90 bp ACGTTTGGACTGAGTGTTCCTGGAGAGGTCCCCATGGACCATTGCTaGCCATGCCCAGAGAGCTGGCCCGGAACCAGGGGTGTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: TFGLSVPGEVPMDHC*PCPESWPGTRGVLQ
Trigger: CTGCAGAACACCCCTGGTTCCGGGCCAGCTCTCTGGGCATGGCCAGCAATGGTCCATGGGGACCTCTCCAGGAACACTCAGTCCAAACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS GCA 90 bp ACAAGGGCTCATCTCACACAGCTGGGTGGCTGGGCAGATCCACAGTaGTCCTTGTCTCCACAGTGTCCCCACCTCTGGATGCCAAGTCCC +
Preference number: 5 (lower is better)
Translates to: TRAHLTQLGGWADPQ*SLSPQCPHLWMPSP
Trigger: GGGACTTGGCATCCAGAGGTGGGGACACTGTGGAGACAAGGAGCACTGTGGATCTGCCCAGCCACCCAGCTGTGTGAGATGAGCCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS GCA 90 bp AGCTGCACCCTGCAGGAACAAAGGCAGGCCAACAGAGCACCAAACTaGCGGTCTCTGCAAGGCAGGGCCCAGGTTACATTGGAACATGCC +
Preference number: 5 (lower is better)
Translates to: SCTLQEQRQANRAPN*RSLQGRAQVTLEHA
Trigger: GGCATGTTCCAATGTAACCTGGGCCCTGCCTTGCAGAGACCGGCAGTTTGGTGCTCTGTTGGCCTGCCTTTGTTCCTGCAGGGTGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS GCA 90 bp TGCAGGAACAAAGGCAGGCCAACAGAGCACCAAACTGCCGGTCTCTaGAAGGCAGGGCCCAGGTTACATTGGAACATGCCAGGGATCCTG +
Preference number: 5 (lower is better)
Translates to: CRNKGRPTEHQTAGL*KAGPRLHWNMPGIL
Trigger: CAGGATCCCTGGCATGTTCCAATGTAACCTGGGCCCTGCCTTGCAGAGACCGGCAGTTTGGTGCTCTGTTGGCCTGCCTTTGTTCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CCA 90 bp GCTCCTTGTCTCCACAGTGTCCCCACCTCTGGATGCCAAGTCCCATaGTGCCCACAGTTTGTTCTGTTCCTGTCTGTTCCAAACCGCTGC +
Preference number: 5 (lower is better)
Translates to: APCLHSVPTSGCQVP*CPQFVLFLSVPNRC
Trigger: GCAGCGGTTTGGAACAGACAGGAACAGAACAAACTGTGGGCACCATGGGACTTGGCATCCAGAGGTGGGGACACTGTGGAGACAAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CCA 90 bp TGGGCAGATCCACAGTGCTCCTTGTCTCCACAGTGTCCCCACCTCTaGATGCCAAGTCCCATGGTGCCCACAGTTTGTTCTGTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: WADPQCSLSPQCPHL*MPSPMVPTVCSVPV
Trigger: GACAGGAACAGAACAAACTGTGGGCACCATGGGACTTGGCATCCAGAGGTGGGGACACTGTGGAGACAAGGAGCACTGTGGATCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CCA 90 bp GAGATGCACAGTAACAGACTCCAGCACGTTTGGACTGAGTGTTCCTaGAGAGGTCCCCATGGACCATTGCTGGCCATGCCCAGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: EMHSNRLQHVWTECS*RGPHGPLLAMPREL
Trigger: CAGCTCTCTGGGCATGGCCAGCAATGGTCCATGGGGACCTCTCCAGGAACACTCAGTCCAAACGTGCTGGAGTCTGTTACTGTGCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS GCA 90 bp GAAGCTCTGGAAACGTCCCAAGGGGAAAGGATTCTTTGTCCCCTTTaGATGGCCTGGAGCTTCCACAAGGGCTCATCTCACACAGCTGGG +
Preference number: 5 (lower is better)
Translates to: EALETSQGERILCPL*MAWSFHKGSSHTAG
Trigger: CCCAGCTGTGTGAGATGAGCCCTTGTGGAAGCTCCAGGCCATGCAAAGGGGACAAAGAATCCTTTCCCCTTGGGACGTTTCCAGAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS GCA 90 bp CAGATCCACAGTGCTCCTTGTCTCCACAGTGTCCCCACCTCTGGATaGCAAGTCCCATGGTGCCCACAGTTTGTTCTGTTCCTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: QIHSAPCLHSVPTSG*QVPWCPQFVLFLSV
Trigger: AACAGACAGGAACAGAACAAACTGTGGGCACCATGGGACTTGGCATCCAGAGGTGGGGACACTGTGGAGACAAGGAGCACTGTGGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS GCA 90 bp GTGGGGAGACGCTCATTTGTCCGTTTACACCCACACACAGGCTCATaGCCAGAGATGCACAGTAACAGACTCCAGCACGTTTGGACTGAG +
Preference number: 5 (lower is better)
Translates to: VGRRSFVRLHPHTGS*PEMHSNRLQHVWTE
Trigger: CTCAGTCCAAACGTGCTGGAGTCTGTTACTGTGCATCTCTGGGCATGAGCCTGTGTGTGGGTGTAAACGGACAAATGAGCGTCTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CCA 90 bp GAGCACCAAACTGCCGGTCTCTGCAAGGCAGGGCCCAGGTTACATTaGAACATGCCAGGGATCCTGAGGCAGCAAAAGGGGAAATTTCTA +
Preference number: 5 (lower is better)
Translates to: EHQTAGLCKAGPRLH*NMPGILRQQKGKFL
Trigger: TAGAAATTTCCCCTTTTGCTGCCTCAGGATCCCTGGCATGTTCCAATGTAACCTGGGCCCTGCCTTGCAGAGACCGGCAGTTTGGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS TCA 90 bp CCCTCCCACACACACATGCTAGTGGACAAAAGTGAAGACACAACATaGCAACACAGTGAGGTTCGCCGTGGGGAGACGCTCATTTGTCCG +
Preference number: 5 (lower is better)
Translates to: PSHTHMLVDKSEDTT*QHSEVRRGETLICP
Trigger: CGGACAAATGAGCGTCTCCCCACGGCGAACCTCACTGTGTTGTCATGTTGTGTCTTCACTTTTGTCCACTAGCATGTGTGTGTGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS GCA 90 bp GCTCATTTGTCCGTTTACACCCACACACAGGCTCATGCCCAGAGATaGACAGTAACAGACTCCAGCACGTTTGGACTGAGTGTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: AHLSVYTHTQAHAQR*TVTDSSTFGLSVPG
Trigger: TCCAGGAACACTCAGTCCAAACGTGCTGGAGTCTGTTACTGTGCATCTCTGGGCATGAGCCTGTGTGTGGGTGTAAACGGACAAATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CCA 90 bp ATAGGGATTTCAGACACCCAAACCATGGGATTATCCAAGAAGCTCTaGAAACGTCCCAAGGGGAAAGGATTCTTTGTCCCCTTTGCATGG +
Preference number: 5 (lower is better)
Translates to: IGISDTQTMGLSKKL*KRPKGKGFFVPFAW
Trigger: CCATGCAAAGGGGACAAAGAATCCTTTCCCCTTGGGACGTTTCCAGAGCTTCTTGGATAATCCCATGGTTTGGGTGTCTGAAATCCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS TCA 90 bp GCTACACAGCTACATACCCCAACCTACCCTCTTTCACATGAGCTTTaGCATGTCGTATGCTCATATTATTATATACCCATATCTAGACGT +
Preference number: 5 (lower is better)
Translates to: ATQLHTPTYPLSHEL*HVVCSYYYIPISRR
Trigger: ACGTCTAGATATGGGTATATAATAATATGAGCATACGACATGTCAAAGCTCATGTGAAAGAGGGTAGGTTGGGGTATGTAGCTGTGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS TCA 90 bp ACACATGGCTACACAGCTACATACCCCAACCTACCCTCTTTCACATaGGCTTTGACATGTCGTATGCTCATATTATTATATACCCATATC +
Preference number: 5 (lower is better)
Translates to: THGYTATYPNLPSFT*ALTCRMLILLYTHI
Trigger: GATATGGGTATATAATAATATGAGCATACGACATGTCAAAGCTCATGTGAAAGAGGGTAGGTTGGGGTATGTAGCTGTGTAGCCATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS GCA 72 bp GGACTGAGTGTTCCTGGAGAGGTCCCCATGGACCATTaGTGGCCATGCCCAGAGAGCTGGCCCGGAACCAGG +
Preference number: 6 (lower is better)
Translates to: GLSVPGEVPMDH*WPCPESWPGTR
Trigger: CCTGGTTCCGGGCCAGCTCTCTGGGCATGGCCAGCAATGGTCCATGGGGACCTCTCCAGGAACACTCAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CCA 72 bp CTGAGTGTTCCTGGAGAGGTCCCCATGGACCATTGCTaGCCATGCCCAGAGAGCTGGCCCGGAACCAGGGGT +
Preference number: 6 (lower is better)
Translates to: LSVPGEVPMDHC*PCPESWPGTRG
Trigger: ACCCCTGGTTCCGGGCCAGCTCTCTGGGCATGGCCAGCAATGGTCCATGGGGACCTCTCCAGGAACACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CAA 90 bp CAGCACGTTTGGACTGAGTGTTCCTGGAGAGGTCCCCATGGACCATaGCTGGCCATGCCCAGAGAGCTGGCCCGGAACCAGGGGTGTTCT +
Preference number: 6 (lower is better)
Translates to: QHVWTECSWRGPHGP*LAMPRELARNQGCS
Trigger: AGAACACCCCTGGTTCCGGGCCAGCTCTCTGGGCATGGCCAGCAATGGTCCATGGGGACCTCTCCAGGAACACTCAGTCCAAACGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS GCA 72 bp CATCTCACACAGCTGGGTGGCTGGGCAGATCCACAGTaGTCCTTGTCTCCACAGTGTCCCCACCTCTGGATG +
Preference number: 6 (lower is better)
Translates to: HLTQLGGWADPQ*SLSPQCPHLWM
Trigger: CATCCAGAGGTGGGGACACTGTGGAGACAAGGAGCACTGTGGATCTGCCCAGCCACCCAGCTGTGTGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS GCA 72 bp CTGCAGGAACAAAGGCAGGCCAACAGAGCACCAAACTaGCGGTCTCTGCAAGGCAGGGCCCAGGTTACATTG +
Preference number: 6 (lower is better)
Translates to: LQEQRQANRAPN*RSLQGRAQVTL
Trigger: CAATGTAACCTGGGCCCTGCCTTGCAGAGACCGGCAGTTTGGTGCTCTGTTGGCCTGCCTTTGTTCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CCA 72 bp AGTAACAGACTCCAGCACGTTTGGACTGAGTGTTCCTaGAGAGGTCCCCATGGACCATTGCTGGCCATGCCC +
Preference number: 6 (lower is better)
Translates to: SNRLQHVWTECS*RGPHGPLLAMP
Trigger: GGGCATGGCCAGCAATGGTCCATGGGGACCTCTCCAGGAACACTCAGTCCAAACGTGCTGGAGTCTGTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS GCA 72 bp AGTGCTCCTTGTCTCCACAGTGTCCCCACCTCTGGATaGCAAGTCCCATGGTGCCCACAGTTTGTTCTGTTC +
Preference number: 6 (lower is better)
Translates to: SAPCLHSVPTSG*QVPWCPQFVLF
Trigger: GAACAGAACAAACTGTGGGCACCATGGGACTTGGCATCCAGAGGTGGGGACACTGTGGAGACAAGGAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CCA 72 bp CTCCACAGTGTCCCCACCTCTGGATGCCAAGTCCCATaGTGCCCACAGTTTGTTCTGTTCCTGTCTGTTCCA +
Preference number: 6 (lower is better)
Translates to: LHSVPTSGCQVP*CPQFVLFLSVP
Trigger: TGGAACAGACAGGAACAGAACAAACTGTGGGCACCATGGGACTTGGCATCCAGAGGTGGGGACACTGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CCA 72 bp TGCCCAGAGATGCACAGTAACAGACTCCAGCACGTTTaGACTGAGTGTTCCTGGAGAGGTCCCCATGGACCA +
Preference number: 6 (lower is better)
Translates to: CPEMHSNRLQHV*TECSWRGPHGP
Trigger: TGGTCCATGGGGACCTCTCCAGGAACACTCAGTCCAAACGTGCTGGAGTCTGTTACTGTGCATCTCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CAA 90 bp AGAGCACCAAACTGCCGGTCTCTGCAAGGCAGGGCCCAGGTTACATaGGAACATGCCAGGGATCCTGAGGCAGCAAAAGGGGAAATTTCT +
Preference number: 6 (lower is better)
Translates to: RAPNCRSLQGRAQVT*EHARDPEAAKGEIS
Trigger: AGAAATTTCCCCTTTTGCTGCCTCAGGATCCCTGGCATGTTCCAATGTAACCTGGGCCCTGCCTTGCAGAGACCGGCAGTTTGGTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS GCA 72 bp GAAACGTCCCAAGGGGAAAGGATTCTTTGTCCCCTTTaGATGGCCTGGAGCTTCCACAAGGGCTCATCTCAC +
Preference number: 6 (lower is better)
Translates to: ETSQGERILCPL*MAWSFHKGSSH
Trigger: GTGAGATGAGCCCTTGTGGAAGCTCCAGGCCATGCAAAGGGGACAAAGAATCCTTTCCCCTTGGGACGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CAA 72 bp GGAAACGTCCCAAGGGGAAAGGATTCTTTGTCCCCTTaGCATGGCCTGGAGCTTCCACAAGGGCTCATCTCA +
Preference number: 6 (lower is better)
Translates to: GNVPRGKDSLSP*HGLELPQGLIS
Trigger: TGAGATGAGCCCTTGTGGAAGCTCCAGGCCATGCAAAGGGGACAAAGAATCCTTTCCCCTTGGGACGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CAA 72 bp AGAAGCTCTGGAAACGTCCCAAGGGGAAAGGATTCTTaGTCCCCTTTGCATGGCCTGGAGCTTCCACAAGGG +
Preference number: 6 (lower is better)
Translates to: RSSGNVPRGKDS*SPLHGLELPQG
Trigger: CCCTTGTGGAAGCTCCAGGCCATGCAAAGGGGACAAAGAATCCTTTCCCCTTGGGACGTTTCCAGAGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS GCA 72 bp TCCGTTTACACCCACACACAGGCTCATGCCCAGAGATaGACAGTAACAGACTCCAGCACGTTTGGACTGAGT +
Preference number: 6 (lower is better)
Translates to: SVYTHTQAHAQR*TVTDSSTFGLS
Trigger: ACTCAGTCCAAACGTGCTGGAGTCTGTTACTGTGCATCTCTGGGCATGAGCCTGTGTGTGGGTGTAAACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CAA 90 bp GATTATCCAAGAAGCTCTGGAAACGTCCCAAGGGGAAAGGATTCTTaGTCCCCTTTGCATGGCCTGGAGCTTCCACAAGGGCTCATCTCA +
Preference number: 6 (lower is better)
Translates to: DYPRSSGNVPRGKDS*SPLHGLELPQGLIS
Trigger: TGAGATGAGCCCTTGTGGAAGCTCCAGGCCATGCAAAGGGGACAAAGAATCCTTTCCCCTTGGGACGTTTCCAGAGCTTCTTGGATAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS TCA 72 bp ACACACATGCTAGTGGACAAAAGTGAAGACACAACATaGCAACACAGTGAGGTTCGCCGTGGGGAGACGCTC +
Preference number: 6 (lower is better)
Translates to: THMLVDKSEDTT*QHSEVRRGETL
Trigger: GAGCGTCTCCCCACGGCGAACCTCACTGTGTTGTCATGTTGTGTCTTCACTTTTGTCCACTAGCATGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS GCA 72 bp CCACAGTTTGTTCTGTTCCTGTCTGTTCCAAACCGCTaGTTACTCTCCTGCCTCTTTTGCAGGCTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: PQFVLFLSVPNR*LLSCLFCRLCL
Trigger: CAGACAGAGCCTGCAAAAGAGGCAGGAGAGTAAGCAGCGGTTTGGAACAGACAGGAACAGAACAAACTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS CCA 72 bp TCAGACACCCAAACCATGGGATTATCCAAGAAGCTCTaGAAACGTCCCAAGGGGAAAGGATTCTTTGTCCCC +
Preference number: 6 (lower is better)
Translates to: SDTQTMGLSKKL*KRPKGKGFFVP
Trigger: GGGGACAAAGAATCCTTTCCCCTTGGGACGTTTCCAGAGCTTCTTGGATAATCCCATGGTTTGGGTGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1
CDS TCA 72 bp TACACAGCTACATACCCCAACCTACCCTCTTTCACATaGGCTTTGACATGTCGTATGCTCATATTATTATAT +
Preference number: 6 (lower is better)
Translates to: YTATYPNLPSFT*ALTCRMLILLY
Trigger: ATATAATAATATGAGCATACGACATGTCAAAGCTCATGTGAAAGAGGGTAGGTTGGGGTATGTAGCTGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426515.1