Pregenerated sensors for LINC01771 (Homo sapiens)

Ensembl gene IDs: ENSG00000225675

Ensembl transcript IDs: ENST00000445039.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ATCCTGCGACAGTTGATCTGGGAACTGAAGCAGCTGCTGAGTGACTaGTGGGAGAGTAGTGTCTATAGCGCGGATCCACTGGACAAAGGG	+
Preference number: 5 (lower is better) Translates to: ILRQLIWELKQLLSD*WESSVYSADPLDKG Trigger: CCCTTTGTCCAGTGGATCCGCGCTATAGACACTACTCTCCCATCAGTCACTCAGCAGCTGCTTCAGTTCCCAGATCAACTGTCGCAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445039.2
CDS GCA 90 bp	TTTAATATCTTTGGACCGTGGTTGACCTCGGGTAAATTAATCTCATaGTTGTTATGTGTCAGGCCTTGTATTTATCCTCTGAAGACAAAG	+
Preference number: 5 (lower is better) Translates to: FNIFGPWLTSGKLIS*LLCVRPCIYPLKTK Trigger: CTTTGTCTTCAGAGGATAAATACAAGGCCTGACACATAACAAGCATGAGATTAATTTACCCGAGGTCAACCACGGTCCAAAGATATTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445039.2
CDS CAA 72 bp	GGACCGTGGTTGACCTCGGGTAAATTAATCTCATGCTaGTTATGTGTCAGGCCTTGTATTTATCCTCTGAAG	+
Preference number: 6 (lower is better) Translates to: GPWLTSGKLISC*LCVRPCIYPLK Trigger: CTTCAGAGGATAAATACAAGGCCTGACACATAACAAGCATGAGATTAATTTACCCGAGGTCAACCACGGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445039.2
CDS CAA 90 bp	AATATCTTTGGACCGTGGTTGACCTCGGGTAAATTAATCTCATGCTaGTTATGTGTCAGGCCTTGTATTTATCCTCTGAAGACAAAGATG	+
Preference number: 6 (lower is better) Translates to: NIFGPWLTSGKLISC*LCVRPCIYPLKTKM Trigger: CATCTTTGTCTTCAGAGGATAAATACAAGGCCTGACACATAACAAGCATGAGATTAATTTACCCGAGGTCAACCACGGTCCAAAGATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445039.2
CDS CAA 72 bp	TTCTGGAATTTTCCATTTAATATCTTTGGACCGTGGTaGACCTCGGGTAAATTAATCTCATGCTTGTTATGT	+
Preference number: 6 (lower is better) Translates to: FWNFPFNIFGPW*TSGKLISCLLC Trigger: ACATAACAAGCATGAGATTAATTTACCCGAGGTCAACCACGGTCCAAAGATATTAAATGGAAAATTCCAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445039.2

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