Pregenerated sensors for LINC01766 (Homo sapiens)
Ensembl gene IDs: ENSG00000224910Ensembl transcript IDs: ENST00000453968.2, ENST00000655429.1, ENST00000656011.1, ENST00000657146.1, ENST00000657962.1, ENST00000659371.1, ENST00000660835.1, ENST00000661919.1, ENST00000665580.1, ENST00000667472.1, ENST00000669392.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCAGAACTTGCTCTTGTTAATTGGACTCTGCAAGCGTGGAGTGACTaGACCATGGCGGCCAGGCAGGCCCCGCCTCCTAGCCTGTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: PELALVNWTLQAWSD*TMAARQAPPPSLSL Trigger: GAGAGACAGGCTAGGAGGCGGGGCCTGCCTGGCCGCCATGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656011.1 ENST00000669392.1 |
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| CDS CCA 90 bp | TTGCTCTTGTTAATTGGACTCTGCAAGCGTGGAGTGACTGGACCATaGCGGCCAGGCAGGCCCCGCCTCCTAGCCTGTCTCTCTACTTCT | + |
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Preference number: 5 (lower is better) Translates to: LLLLIGLCKRGVTGP*RPGRPRLLACLSTS Trigger: AGAAGTAGAGAGACAGGCTAGGAGGCGGGGCCTGCCTGGCCGCCATGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669392.1 |
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| CDS CCA 90 bp | TCACGGCTGGGATGGCTAGGGGAAGGCAACAGAAGAGGCCCAGGATaGACAGGCAGAGGTAGTCGCTGGATTCATCCTCATCAGACATCA | + |
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Preference number: 5 (lower is better) Translates to: SRLGWLGEGNRRGPG*TGRGSRWIHPHQTS Trigger: TGATGTCTGATGAGGATGAATCCAGCGACTACCTCTGCCTGTCCATCCTGGGCCTCTTCTGTTGCCTTCCCCTAGCCATCCCAGCCGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000453968.2 ENST00000655429.1 ENST00000656011.1 ENST00000657146.1 ENST00000657962.1 ENST00000659371.1 ENST00000660835.1 ENST00000661919.1 ENST00000665580.1 ENST00000667472.1 ENST00000669392.1 |
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| CDS CCA 90 bp | TTCTTTCTACCAGAACTTGCTCTTGTTAATTGGACTCTGCAAGCGTaGAGTGACTGGACCATGGCGGCCAGGCAGGCCCCGCCTCCTAGC | + |
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Preference number: 5 (lower is better) Translates to: FFLPELALVNWTLQA*SDWTMAARQAPPPS Trigger: GCTAGGAGGCGGGGCCTGCCTGGCCGCCATGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656011.1 ENST00000669392.1 |
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| CDS GCA 90 bp | AAGTCACCTTCTTTCTACCAGAACTTGCTCTTGTTAATTGGACTCTaGAAGCGTGGAGTGACTGGACCATGGCGGCCAGGCAGGCCCCGC | + |
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Preference number: 5 (lower is better) Translates to: KSPSFYQNLLLLIGL*KRGVTGPWRPGRPR Trigger: GCGGGGCCTGCCTGGCCGCCATGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656011.1 ENST00000669392.1 |
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| CDS GCA 90 bp | AAGTCACCTTCTTTCTACCAGAACTTGCTCTTGTTAATTGGACTCTaGAAGCGTGGAGTGACTGGACCACAGGGGATTACCATGGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: KSPSFYQNLLLLIGL*KRGVTGPQGITMAA Trigger: GGCCGCCATGGTAATCCCCTGTGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659371.1 |
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| CDS GCA 90 bp | GATGCTCGCGATGGCCCAGTAGTAGGCTTGTTTGGAGGTCTTGGCTaGCAGCTCATAGTCACTGGATTTATTGTAGTTCTTTGTCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: DARDGPVVGLFGGLG*QLIVTGFIVVLCQA Trigger: TGCCTGACAAAGAACTACAATAAATCCAGTGACTATGAGCTGGCAGCCAAGACCTCCAAACAAGCCTACTACTGGGCCATCGCGAGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000453968.2 ENST00000655429.1 ENST00000657146.1 ENST00000657962.1 ENST00000659371.1 ENST00000660835.1 ENST00000665580.1 ENST00000667472.1 ENST00000669392.1 |
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| CDS CCA 90 bp | ATTTATTGTAGTTCTTTGTCAGGCAAGAAAAGATCACGGCTGGGATaGCTAGGGGAAGGCAACAGAAGAGGCCCAGGATGGACAGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: IYCSSLSGKKRSRLG*LGEGNRRGPGWTGR Trigger: TCTGCCTGTCCATCCTGGGCCTCTTCTGTTGCCTTCCCCTAGCCATCCCAGCCGTGATCTTTTCTTGCCTGACAAAGAACTACAATAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000453968.2 ENST00000655429.1 ENST00000657146.1 ENST00000657962.1 ENST00000659371.1 ENST00000660835.1 ENST00000665580.1 ENST00000667472.1 ENST00000669392.1 |
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| CDS CCA 90 bp | TGGAATAAAGTCACCTTCTTTCTACCAGAACTTGCTCTTGTTAATTaGACTCTGCAAGCGTGGAGTGACTGGACCATGGCGGCCAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: WNKVTFFLPELALVN*TLQAWSDWTMAARQ Trigger: CTGCCTGGCCGCCATGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTTTATTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656011.1 ENST00000669392.1 |
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| CDS TCA 90 bp | AGTATATCAGGTAGGTGTACAAGATGGTACCTAAGATTCCCACAGTaGTGCTCGCGATGGCCCAGTAGTAGGCTTGTTTGGAGGTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SISGRCTRWYLRFPQ*CSRWPSSRLVWRSW Trigger: CCAAGACCTCCAAACAAGCCTACTACTGGGCCATCGCGAGCATCACTGTGGGAATCTTAGGTACCATCTTGTACACCTACCTGATATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000453968.2 ENST00000655429.1 ENST00000656011.1 ENST00000657146.1 ENST00000657962.1 ENST00000659371.1 ENST00000660835.1 ENST00000661919.1 ENST00000665580.1 ENST00000667472.1 ENST00000669392.1 |
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| CDS TCA 90 bp | ACCCGTGCCCTTGTGACATATGTCTGTGTCCACTTATATCACCCCTaGGGTTCCTTTATGATACCCTTTCTGCTCTCATCATTTCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: TRALVTYVCVHLYHP*GSFMIPFLLSSFPL Trigger: GAGGGGAAATGATGAGAGCAGAAAGGGTATCATAAAGGAACCTCAGGGGTGATATAAGTGGACACAGACATATGTCACAAGGGCACGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665580.1 |
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| CDS GCA 90 bp | AAGTCACCTTCTTTCTACCAGAACTTGCTCTTGTTAATTGGACTCTaGAAGCGTGGAGTGACTGGACCTGTAATCCCAGCTACTTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: KSPSFYQNLLLLIGL*KRGVTGPVIPATWE Trigger: CTCCCAAGTAGCTGGGATTACAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655429.1 ENST00000657962.1 ENST00000665580.1 |
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| CDS GCA 90 bp | GATGCTCGCGATGGCCCAGTAGTAGGCTTGTTTGGAGGTCTTGGCTaGCAGCTCATAGTCACTGGATTTATTGTAGTTCTTTGTCTACAA | + |
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Preference number: 5 (lower is better) Translates to: DARDGPVVGLFGGLG*QLIVTGFIVVLCLQ Trigger: TTGTAGACAAAGAACTACAATAAATCCAGTGACTATGAGCTGGCAGCCAAGACCTCCAAACAAGCCTACTACTGGGCCATCGCGAGCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656011.1 ENST00000661919.1 |
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| CDS GCA 90 bp | AAGTCACCTTCTTTCTACCAGAACTTGCTCTTGTTAATTGGACTCTaGAAGCGTGGAGTGACTGGACCTTACAAAGTCCTGCCCTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: KSPSFYQNLLLLIGL*KRGVTGPYKVLPCL Trigger: GAGACAGGGCAGGACTTTGTAAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657146.1 |
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| CDS GCA 90 bp | AAGTCACCTTCTTTCTACCAGAACTTGCTCTTGTTAATTGGACTCTaGAAGCGTGGAGTGACTGGACCTAGGTCTGGCACTATGCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: KSPSFYQNLLLLIGL*KRGVTGPRSGTMLF Trigger: GAAGAGCATAGTGCCAGACCTAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660835.1 |
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| CDS CCA 90 bp | TTCTTTCTACCAGAACTTGCTCTTGTTAATTGGACTCTGCAAGCGTaGAGTGACTGGACCTTACAAAGTCCTGCCCTGTCTCCCTCTAAC | + |
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Preference number: 5 (lower is better) Translates to: FFLPELALVNWTLQA*SDWTLQSPALSPSN Trigger: GTTAGAGGGAGACAGGGCAGGACTTTGTAAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657146.1 |
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| CDS CCA 90 bp | TGGAATAAAGTCACCTTCTTTCTACCAGAACTTGCTCTTGTTAATTaGACTCTGCAAGCGTGGAGTGACTGGACCTGTAATCCCAGCTAC | + |
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Preference number: 5 (lower is better) Translates to: WNKVTFFLPELALVN*TLQAWSDWTCNPSY Trigger: GTAGCTGGGATTACAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTTTATTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655429.1 ENST00000657962.1 ENST00000665580.1 |
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| CDS CCA 90 bp | TGGAATAAAGTCACCTTCTTTCTACCAGAACTTGCTCTTGTTAATTaGACTCTGCAAGCGTGGAGTGACTGGACCTTACAAAGTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: WNKVTFFLPELALVN*TLQAWSDWTLQSPA Trigger: GGCAGGACTTTGTAAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTTTATTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657146.1 |
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| CDS CCA 90 bp | TGGAATAAAGTCACCTTCTTTCTACCAGAACTTGCTCTTGTTAATTaGACTCTGCAAGCGTGGAGTGACTGGACCACAGGGGATTACCAT | + |
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Preference number: 5 (lower is better) Translates to: WNKVTFFLPELALVN*TLQAWSDWTTGDYH Trigger: ATGGTAATCCCCTGTGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTTTATTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659371.1 |
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| CDS CCA 90 bp | CGCTGGATTCATCCTCATCAGACATCAGTTCAAACACCTGAGCTCTaGAATAAAGTCACCTTCTTTCTACCAGAACTTGCTCTTGTTAAT | + |
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Preference number: 5 (lower is better) Translates to: RWIHPHQTSVQTPEL*NKVTFFLPELALVN Trigger: ATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTTTATTCCAGAGCTCAGGTGTTTGAACTGATGTCTGATGAGGATGAATCCAGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000453968.2 ENST00000655429.1 ENST00000656011.1 ENST00000657146.1 ENST00000657962.1 ENST00000659371.1 ENST00000660835.1 ENST00000665580.1 ENST00000669392.1 |
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| CDS CCA 90 bp | AGTAGTAGGCTTGTTTGGAGGTCTTGGCTGCCAGCTCATAGTCACTaGATTTATTGTAGTTCTTTGTCTACAATACAAACTTTGTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SSRLVWRSWLPAHSH*IYCSSLSTIQTLSE Trigger: CTCAGACAAAGTTTGTATTGTAGACAAAGAACTACAATAAATCCAGTGACTATGAGCTGGCAGCCAAGACCTCCAAACAAGCCTACTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656011.1 ENST00000661919.1 |
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| CDS CCA 72 bp | TTAATTGGACTCTGCAAGCGTGGAGTGACTGGACCATaGCGGCCAGGCAGGCCCCGCCTCCTAGCCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LIGLCKRGVTGP*RPGRPRLLACL Trigger: GAGACAGGCTAGGAGGCGGGGCCTGCCTGGCCGCCATGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656011.1 ENST00000669392.1 |
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| CDS CCA 72 bp | GCTCTTGTTAATTGGACTCTGCAAGCGTGGAGTGACTaGACCATGGCGGCCAGGCAGGCCCCGCCTCCTAGC | + |
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Preference number: 6 (lower is better) Translates to: ALVNWTLQAWSD*TMAARQAPPPS Trigger: GCTAGGAGGCGGGGCCTGCCTGGCCGCCATGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656011.1 ENST00000669392.1 |
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| CDS CCA 72 bp | GGTGAGGGTGGGCTGTGGAACTGTAAGGACTCAGGGTaGGGGTCTGAACCCACAGGAGGTGCTGGTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: GEGGLWNCKDSG*GSEPTGGAGVA Trigger: AGCAACACCAGCACCTCCTGTGGGTTCAGACCCCCACCCTGAGTCCTTACAGTTCCACAGCCCACCCTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656011.1 ENST00000661919.1 |
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| CDS CCA 72 bp | CCAGAACTTGCTCTTGTTAATTGGACTCTGCAAGCGTaGAGTGACTGGACCATGGCGGCCAGGCAGGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: PELALVNWTLQA*SDWTMAARQAP Trigger: CGGGGCCTGCCTGGCCGCCATGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656011.1 ENST00000669392.1 |
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| CDS CCA 72 bp | AGGTGCCCACCAGGCAAGAAAAGATCACGGCTGGGATaGCTAGGGGAAGGCAACAGAAGAGGCCCAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: RCPPGKKRSRLG*LGEGNRRGPGW Trigger: CCATCCTGGGCCTCTTCTGTTGCCTTCCCCTAGCCATCCCAGCCGTGATCTTTTCTTGCCTGGTGGGCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656011.1 ENST00000661919.1 |
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| CDS CAA 72 bp | TCCCACAGTGATGCTCGCGATGGCCCAGTAGTAGGCTaGTTTGGAGGTCTTGGCTGCCAGCTCATAGTCACT | + |
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Preference number: 6 (lower is better) Translates to: SHSDARDGPVVG*FGGLGCQLIVT Trigger: AGTGACTATGAGCTGGCAGCCAAGACCTCCAAACAAGCCTACTACTGGGCCATCGCGAGCATCACTGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000453968.2 ENST00000655429.1 ENST00000656011.1 ENST00000657146.1 ENST00000657962.1 ENST00000659371.1 ENST00000660835.1 ENST00000661919.1 ENST00000665580.1 ENST00000667472.1 ENST00000669392.1 |
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| CDS CCA 72 bp | AGTTCTTTGTCAGGCAAGAAAAGATCACGGCTGGGATaGCTAGGGGAAGGCAACAGAAGAGGCCCAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: SSLSGKKRSRLG*LGEGNRRGPGW Trigger: CCATCCTGGGCCTCTTCTGTTGCCTTCCCCTAGCCATCCCAGCCGTGATCTTTTCTTGCCTGACAAAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000453968.2 ENST00000655429.1 ENST00000657146.1 ENST00000657962.1 ENST00000659371.1 ENST00000660835.1 ENST00000665580.1 ENST00000667472.1 ENST00000669392.1 |
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| CDS CCA 72 bp | CCAGAACTTGCTCTTGTTAATTGGACTCTGCAAGCGTaGAGTGACTGGACCACAGGGGATTACCATGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: PELALVNWTLQA*SDWTTGDYHGG Trigger: GCCGCCATGGTAATCCCCTGTGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659371.1 |
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| CDS GCA 72 bp | TCTTTCTACCAGAACTTGCTCTTGTTAATTGGACTCTaGAAGCGTGGAGTGACTGGACCATGGCGGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SFYQNLLLLIGL*KRGVTGPWRPG Trigger: GCCTGGCCGCCATGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656011.1 ENST00000669392.1 |
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| CDS TCA 72 bp | GGTAGGTGTACAAGATGGTACCTAAGATTCCCACAGTaGTGCTCGCGATGGCCCAGTAGTAGGCTTGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: GRCTRWYLRFPQ*CSRWPSSRLVW Trigger: CCAAACAAGCCTACTACTGGGCCATCGCGAGCATCACTGTGGGAATCTTAGGTACCATCTTGTACACCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000453968.2 ENST00000655429.1 ENST00000656011.1 ENST00000657146.1 ENST00000657962.1 ENST00000659371.1 ENST00000660835.1 ENST00000661919.1 ENST00000665580.1 ENST00000667472.1 ENST00000669392.1 |
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| CDS CCA 72 bp | TCGCGATGGCCCAGTAGTAGGCTTGTTTGGAGGTCTTaGCTGCCAGCTCATAGTCACTGGATTTATTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: SRWPSSRLVWRS*LPAHSHWIYCS Trigger: ACTACAATAAATCCAGTGACTATGAGCTGGCAGCCAAGACCTCCAAACAAGCCTACTACTGGGCCATCGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000453968.2 ENST00000655429.1 ENST00000656011.1 ENST00000657146.1 ENST00000657962.1 ENST00000659371.1 ENST00000660835.1 ENST00000661919.1 ENST00000665580.1 ENST00000667472.1 ENST00000669392.1 |
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| CDS CCA 72 bp | CCAGAACTTGCTCTTGTTAATTGGACTCTGCAAGCGTaGAGTGACTGGACCTGTAATCCCAGCTACTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: PELALVNWTLQA*SDWTCNPSYLG Trigger: TCCCAAGTAGCTGGGATTACAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655429.1 ENST00000657962.1 ENST00000665580.1 |
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| CDS CCA 72 bp | GTCACCTTCTTTCTACCAGAACTTGCTCTTGTTAATTaGACTCTGCAAGCGTGGAGTGACTGGACCATGGCG | + |
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Preference number: 6 (lower is better) Translates to: VTFFLPELALVN*TLQAWSDWTMA Trigger: CGCCATGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656011.1 ENST00000669392.1 |
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| CDS CCA 72 bp | CCAGAACTTGCTCTTGTTAATTGGACTCTGCAAGCGTaGAGTGACTGGACCTTACAAAGTCCTGCCCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: PELALVNWTLQA*SDWTLQSPALS Trigger: AGACAGGGCAGGACTTTGTAAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657146.1 |
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| CDS CCA 72 bp | GTCACCTTCTTTCTACCAGAACTTGCTCTTGTTAATTaGACTCTGCAAGCGTGGAGTGACTGGACCACAGGG | + |
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Preference number: 6 (lower is better) Translates to: VTFFLPELALVN*TLQAWSDWTTG Trigger: CCCTGTGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659371.1 |
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| CDS CAA 90 bp | CTGAGCTCTGGAATAAAGTCACCTTCTTTCTACCAGAACTTGCTCTaGTTAATTGGACTCTGCAAGCGTGGAGTGACTGGACCATGGCGG | + |
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Preference number: 6 (lower is better) Translates to: LSSGIKSPSFYQNLL*LIGLCKRGVTGPWR Trigger: CCGCCATGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTTTATTCCAGAGCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656011.1 ENST00000669392.1 |
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| CDS CAA 90 bp | CTGAGCTCTGGAATAAAGTCACCTTCTTTCTACCAGAACTTGCTCTaGTTAATTGGACTCTGCAAGCGTGGAGTGACTGGACCACAGGGG | + |
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Preference number: 6 (lower is better) Translates to: LSSGIKSPSFYQNLL*LIGLCKRGVTGPQG Trigger: CCCCTGTGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTTTATTCCAGAGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659371.1 |
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| CDS TCA 72 bp | CACCTCTCAACTTCTGAAACCAGCTTTCTGACTCTTTaGACTCCCTCTCCAACCACGTACAACAGCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: HLSTSETSFLTL*TPSPTTYNSLP Trigger: AGGAAGGCTGTTGTACGTGGTTGGAGAGGGAGTTCAAAGAGTCAGAAAGCTGGTTTCAGAAGTTGAGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661919.1 |
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| CDS GCA 72 bp | TCTTTCTACCAGAACTTGCTCTTGTTAATTGGACTCTaGAAGCGTGGAGTGACTGGACCACAGGGGATTACC | + |
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Preference number: 6 (lower is better) Translates to: SFYQNLLLLIGL*KRGVTGPQGIT Trigger: GGTAATCCCCTGTGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659371.1 |
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| CDS GCA 72 bp | TCTTTCTACCAGAACTTGCTCTTGTTAATTGGACTCTaGAAGCGTGGAGTGACTGGACCTAGGTCTGGCACT | + |
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Preference number: 6 (lower is better) Translates to: SFYQNLLLLIGL*KRGVTGPRSGT Trigger: AGTGCCAGACCTAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660835.1 |
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| CDS CAA 90 bp | CTGAGCTCTGGAATAAAGTCACCTTCTTTCTACCAGAACTTGCTCTaGTTAATTGGACTCTGCAAGCGTGGAGTGACTGGACCTAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LSSGIKSPSFYQNLL*LIGLCKRGVTGPRS Trigger: AGACCTAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTTTATTCCAGAGCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660835.1 |
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| CDS TCA 72 bp | CCCTCTAACACCTCTCAACTTCTGAAACCAGCTTTCTaGCTCTTTGAACTCCCTCTCCAACCACGTACAACA | + |
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Preference number: 6 (lower is better) Translates to: PSNTSQLLKPAF*LFELPLQPRTT Trigger: TGTTGTACGTGGTTGGAGAGGGAGTTCAAAGAGTCAGAAAGCTGGTTTCAGAAGTTGAGAGGTGTTAGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661919.1 |
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| CDS GCA 72 bp | GATGGCCCAGTAGTAGGCTTGTTTGGAGGTCTTGGCTaGCAGCTCATAGTCACTGGATTTATTGTAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: DGPVVGLFGGLG*QLIVTGFIVVL Trigger: AAGAACTACAATAAATCCAGTGACTATGAGCTGGCAGCCAAGACCTCCAAACAAGCCTACTACTGGGCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000453968.2 ENST00000655429.1 ENST00000656011.1 ENST00000657146.1 ENST00000657962.1 ENST00000659371.1 ENST00000660835.1 ENST00000661919.1 ENST00000665580.1 ENST00000667472.1 ENST00000669392.1 |
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| CDS GCA 72 bp | TCTTTCTACCAGAACTTGCTCTTGTTAATTGGACTCTaGAAGCGTGGAGTGACTGGACCTGTAATCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SFYQNLLLLIGL*KRGVTGPVIPA Trigger: AGCTGGGATTACAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655429.1 ENST00000657962.1 ENST00000665580.1 |
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| CDS GCA 72 bp | CACAGCGAGACTAACAGCCTTCCTGTTCTAAACCCGTaGCCTTGTGACATATGTCTGTGTCCACTTATATCA | + |
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Preference number: 6 (lower is better) Translates to: HSETNSLPVLNP*PCDICLCPLIS Trigger: TGATATAAGTGGACACAGACATATGTCACAAGGGCACGGGTTTAGAACAGGAAGGCTGTTAGTCTCGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665580.1 |
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| CDS CAA 90 bp | CTGAGCTCTGGAATAAAGTCACCTTCTTTCTACCAGAACTTGCTCTaGTTAATTGGACTCTGCAAGCGTGGAGTGACTGGACCTGTAATC | + |
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Preference number: 6 (lower is better) Translates to: LSSGIKSPSFYQNLL*LIGLCKRGVTGPVI Trigger: GATTACAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTTTATTCCAGAGCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655429.1 ENST00000657962.1 ENST00000665580.1 |
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| CDS GCA 72 bp | TCTTTCTACCAGAACTTGCTCTTGTTAATTGGACTCTaGAAGCGTGGAGTGACTGGACCTTACAAAGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SFYQNLLLLIGL*KRGVTGPYKVL Trigger: CAGGACTTTGTAAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657146.1 |
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| CDS CCA 72 bp | GTCACCTTCTTTCTACCAGAACTTGCTCTTGTTAATTaGACTCTGCAAGCGTGGAGTGACTGGACCTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: VTFFLPELALVN*TLQAWSDWTCN Trigger: ATTACAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655429.1 ENST00000657962.1 ENST00000665580.1 |
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| CDS CCA 72 bp | GTCACCTTCTTTCTACCAGAACTTGCTCTTGTTAATTaGACTCTGCAAGCGTGGAGTGACTGGACCTTACAA | + |
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Preference number: 6 (lower is better) Translates to: VTFFLPELALVN*TLQAWSDWTLQ Trigger: TTGTAAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657146.1 |
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| CDS CAA 90 bp | CTGAGCTCTGGAATAAAGTCACCTTCTTTCTACCAGAACTTGCTCTaGTTAATTGGACTCTGCAAGCGTGGAGTGACTGGACCTTACAAA | + |
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Preference number: 6 (lower is better) Translates to: LSSGIKSPSFYQNLL*LIGLCKRGVTGPYK Trigger: TTTGTAAGGTCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTTTATTCCAGAGCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657146.1 |
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| CDS TCA 72 bp | TCTGTGTCCACTTATATCACCCCTGAGGTTCCTTTATaGTACCCTTTCTGCTCTCATCATTTCCCCTCTACT | + |
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Preference number: 6 (lower is better) Translates to: SVSTYITPEVPL*YPFCSHHFPST Trigger: AGTAGAGGGGAAATGATGAGAGCAGAAAGGGTATCATAAAGGAACCTCAGGGGTGATATAAGTGGACACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665580.1 |
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| CDS CAA 72 bp | GGAATAAAGTCACCTTCTTTCTACCAGAACTTGCTCTaGTTAATTGGACTCTGCAAGCGTGGAGTGACTGGA | + |
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Preference number: 6 (lower is better) Translates to: GIKSPSFYQNLL*LIGLCKRGVTG Trigger: TCCAGTCACTCCACGCTTGCAGAGTCCAATTAACAAGAGCAAGTTCTGGTAGAAAGAAGGTGACTTTATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000453968.2 ENST00000655429.1 ENST00000656011.1 ENST00000657146.1 ENST00000657962.1 ENST00000659371.1 ENST00000660835.1 ENST00000665580.1 ENST00000669392.1 |
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| CDS TCA 72 bp | CTTGTGACATATGTCTGTGTCCACTTATATCACCCCTaGGGTTCCTTTATGATACCCTTTCTGCTCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: LVTYVCVHLYHP*GSFMIPFLLSS Trigger: TGATGAGAGCAGAAAGGGTATCATAAAGGAACCTCAGGGGTGATATAAGTGGACACAGACATATGTCACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665580.1 |
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| CDS CCA 72 bp | CATCCTCATCAGACATCAGTTCAAACACCTGAGCTCTaGAATAAAGTCACCTTCTTTCTACCAGAACTTGCT | + |
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Preference number: 6 (lower is better) Translates to: HPHQTSVQTPEL*NKVTFFLPELA Trigger: AGCAAGTTCTGGTAGAAAGAAGGTGACTTTATTCCAGAGCTCAGGTGTTTGAACTGATGTCTGATGAGGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000453968.2 ENST00000655429.1 ENST00000656011.1 ENST00000657146.1 ENST00000657962.1 ENST00000659371.1 ENST00000660835.1 ENST00000665580.1 ENST00000669392.1 |
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| CDS CCA 72 bp | CTTGTTTGGAGGTCTTGGCTGCCAGCTCATAGTCACTaGATTTATTGTAGTTCTTTGTCTACAATACAAACT | + |
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Preference number: 6 (lower is better) Translates to: LVWRSWLPAHSH*IYCSSLSTIQT Trigger: AGTTTGTATTGTAGACAAAGAACTACAATAAATCCAGTGACTATGAGCTGGCAGCCAAGACCTCCAAACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656011.1 ENST00000661919.1 |
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