Pregenerated sensors for LINC01764 (Homo sapiens)
Ensembl gene IDs: ENSG00000267308Ensembl transcript IDs: ENST00000587970.1, ENST00000663214.1, ENST00000667266.2, ENST00000674990.1, ENST00000675212.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCCATTGTAACCCCTGTGACCTGCACATATCCGTCCAGGTGGCCTaGAGGAGCCAAGAAGTCTGGAGCAGCCGAAAAACCACAAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: SHCNPCDLHISVQVA*RSQEVWSSRKTTKK Trigger: CTTCTTTGTGGTTTTTCGGCTGCTCCAGACTTCTTGGCTCCTGCAGGCCACCTGGACGGATATGTGCAGGTCACAGGGGTTACAATGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000587970.1 ENST00000663214.1 ENST00000667266.2 |
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| CDS CCA 90 bp | CACCATGCACCTTGTGACTCCCTCCTCAATTTCAAATCGGGTAAGTaGTCTCTTCACTCTTTTCTCCAGCCTCTGTCGCTACCCTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: HHAPCDSLLNFKSGK*SLHSFLQPLSLPSN Trigger: ATTGGAGGGTAGCGACAGAGGCTGGAGAAAAGAGTGAAGAGACCACTTACCCGATTTGAAATTGAGGAGGGAGTCACAAGGTGCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675212.1 |
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| CDS TCA 90 bp | TTATTCACCGTCACAAGTTCTCACTCTTACGACATTCCACCATTATaGCGTGTTCCTGCCCTGCCCCAACTGATCAATCGACCCTGTGAC | + |
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Preference number: 5 (lower is better) Translates to: LFTVTSSHSYDIPPL*RVPALPQLINRPCD Trigger: GTCACAGGGTCGATTGATCAGTTGGGGCAGGGCAGGAACACGTCATAATGGTGGAATGTCGTAAGAGTGAGAACTTGTGACGGTGAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675212.1 |
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| CDS CCA 90 bp | AGACAAAGGAGACACATTTTATCCGTGGACCCAAAACTCTGGCGCTaGTCACAGACTCAGGAAGACAGTCTTCCCTTGGTGTCTAATCAC | + |
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Preference number: 5 (lower is better) Translates to: RQRRHILSVDPKLWR*SQTQEDSLPLVSNH Trigger: GTGATTAGACACCAAGGGAAGACTGTCTTCCTGAGTCTGTGACCAGCGCCAGAGTTTTGGGTCCACGGATAAAATGTGTCTCCTTTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000675212.1 |
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| CDS GCA 72 bp | AACCCCTGTGACCTGCACATATCCGTCCAGGTGGCCTaGAGGAGCCAAGAAGTCTGGAGCAGCCGAAAAACC | + |
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Preference number: 6 (lower is better) Translates to: NPCDLHISVQVA*RSQEVWSSRKT Trigger: GGTTTTTCGGCTGCTCCAGACTTCTTGGCTCCTGCAGGCCACCTGGACGGATATGTGCAGGTCACAGGGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000587970.1 ENST00000663214.1 ENST00000667266.2 |
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| CDS CCA 72 bp | ATTGTAACCCCTGTGACCTGCACATATCCGTCCAGGTaGCCTGCAGGAGCCAAGAAGTCTGGAGCAGCCGAA | + |
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Preference number: 6 (lower is better) Translates to: IVTPVTCTYPSR*PAGAKKSGAAE Trigger: TTCGGCTGCTCCAGACTTCTTGGCTCCTGCAGGCCACCTGGACGGATATGTGCAGGTCACAGGGGTTACAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000587970.1 ENST00000663214.1 ENST00000667266.2 |
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| CDS GCA 72 bp | CTGAGCCGAAGCTCAGCCATTGTAACCCCTGTGACCTaGACATATATGTCCAGGTGGCCTACAGGAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LSRSSAIVTPVT*TYMSRWPTGAK Trigger: CTTGGCTCCTGTAGGCCACCTGGACATATATGTGCAGGTCACAGGGGTTACAATGGCTGAGCTTCGGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674990.1 |
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| CDS CCA 72 bp | CAAAGGAGACACATTTTATCCGTGGACCCAAAACTCTaGCGCTGGTCACAGACTCAGGAAGACAGTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: QRRHILSVDPKL*RWSQTQEDSLP Trigger: GGGAAGACTGTCTTCCTGAGTCTGTGACCAGCGCCAGAGTTTTGGGTCCACGGATAAAATGTGTCTCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000675212.1 |
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| CDS CCA 72 bp | ATTGTAACCCCTGTGACCTGCACATATATGTCCAGGTaGCCTACAGGAGCCAAGAAGTCTGGAGCAGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: IVTPVTCTYMSR*PTGAKKSGAAE Trigger: TTCAGCTGCTCCAGACTTCTTGGCTCCTGTAGGCCACCTGGACATATATGTGCAGGTCACAGGGGTTACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674990.1 |
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| CDS CCA 72 bp | TTCTCTAGTAGAGACAAAGGAGACACATTTTATCCGTaGACCCAAAACTCTGGCGCTGGTCACAGACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: FSSRDKGDTFYP*TQNSGAGHRLR Trigger: CCTGAGTCTGTGACCAGCGCCAGAGTTTTGGGTCCACGGATAAAATGTGTCTCCTTTGTCTCTACTAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000675212.1 |
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| CDS CCA 72 bp | CCTTGTGACTCCCTCCTCAATTTCAAATCGGGTAAGTaGTCTCTTCACTCTTTTCTCCAGCCTCTGTCGCTA | + |
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Preference number: 6 (lower is better) Translates to: PCDSLLNFKSGK*SLHSFLQPLSL Trigger: TAGCGACAGAGGCTGGAGAAAAGAGTGAAGAGACCACTTACCCGATTTGAAATTGAGGAGGGAGTCACAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675212.1 |
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