Pregenerated sensors for LINC01752 (Homo sapiens)
Ensembl gene IDs: ENSG00000224961Ensembl transcript IDs: ENST00000417299.2, ENST00000654385.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATTCTCAGAGGAGAGGAGGGCCCTGCAGAACTGAAAAGGCACCATTaGGAAGGATCCGAAGCTCAGCTGGTGCTGTCCTCAGGATTCACA | + |
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Preference number: 5 (lower is better) Translates to: ILRGEEGPAELKRHH*EGSEAQLVLSSGFT Trigger: TGTGAATCCTGAGGACAGCACCAGCTGAGCTTCGGATCCTTCTCAATGGTGCCTTTTCAGTTCTGCAGGGCCCTCCTCTCCTCTGAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417299.2 |
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| CDS TCA 90 bp | GTCAGAGAACCCATATTCTCAGAGGAGAGGAGGGCCCTGCAGAACTaGAAAGGCACCATTGAGAAGGATCCGAAGCTCAGCTGGTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: VREPIFSEERRALQN*KGTIEKDPKLSWCC Trigger: ACAGCACCAGCTGAGCTTCGGATCCTTCTCAATGGTGCCTTTTCAGTTCTGCAGGGCCCTCCTCTCCTCTGAGAATATGGGTTCTCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417299.2 |
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| CDS GCA 90 bp | CATGCATGGTTCTCCAATGGTACCTTCCTTCCCTGGAGGAATCTTTaGCAAGAAGACTTCTGCTATAGCTACCAACATAGCTGTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: HAWFSNGTFLPWRNL*QEDFCYSYQHSCAT Trigger: GGTGGCACAGCTATGTTGGTAGCTATAGCAGAAGTCTTCTTGGCAAAGATTCCTCCAGGGAAGGAAGGTACCATTGGAGAACCATGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417299.2 ENST00000654385.1 |
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| CDS TCA 90 bp | TGCCAAGAAGACTTCTGCTATAGCTACCAACATAGCTGTGCCACCTaGTTCCATGGATTGGCATCTCCATCACCATCCCTTCAATGTGTG | + |
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Preference number: 5 (lower is better) Translates to: CQEDFCYSYQHSCAT*FHGLASPSPSLQCV Trigger: CACACATTGAAGGGATGGTGATGGAGATGCCAATCCATGGAATCAGGTGGCACAGCTATGTTGGTAGCTATAGCAGAAGTCTTCTTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417299.2 ENST00000654385.1 |
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| CDS CCA 90 bp | CTTCCCTGTCTTCATGCATGGTTCTCCAATGGTACCTTCCTTCCCTaGAGGAATCTTTGCCAAGAAGACTTCTGCTATAGCTACCAACAT | + |
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Preference number: 5 (lower is better) Translates to: LPCLHAWFSNGTFLP*RNLCQEDFCYSYQH Trigger: ATGTTGGTAGCTATAGCAGAAGTCTTCTTGGCAAAGATTCCTCCAGGGAAGGAAGGTACCATTGGAGAACCATGCATGAAGACAGGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417299.2 ENST00000654385.1 |
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| CDS TCA 72 bp | CCCATATTCTCAGAGGAGAGGAGGGCCCTGCAGAACTaGAAAGGCACCATTGAGAAGGATCCGAAGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: PIFSEERRALQN*KGTIEKDPKLS Trigger: GCTGAGCTTCGGATCCTTCTCAATGGTGCCTTTTCAGTTCTGCAGGGCCCTCCTCTCCTCTGAGAATATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417299.2 |
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| CDS CAA 90 bp | TATTCTCAGAGGAGAGGAGGGCCCTGCAGAACTGAAAAGGCACCATaGAGAAGGATCCGAAGCTCAGCTGGTGCTGTCCTCAGGATTCAC | + |
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Preference number: 6 (lower is better) Translates to: YSQRRGGPCRTEKAP*RRIRSSAGAVLRIH Trigger: GTGAATCCTGAGGACAGCACCAGCTGAGCTTCGGATCCTTCTCAATGGTGCCTTTTCAGTTCTGCAGGGCCCTCCTCTCCTCTGAGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417299.2 |
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| CDS GCA 72 bp | TCAGAGAACCCATATTCTCAGAGGAGAGGAGGGCCCTaGAGAACTGAAAAGGCACCATTGAGAAGGATCCGA | + |
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Preference number: 6 (lower is better) Translates to: SENPYSQRRGGP*RTEKAPLRRIR Trigger: TCGGATCCTTCTCAATGGTGCCTTTTCAGTTCTGCAGGGCCCTCCTCTCCTCTGAGAATATGGGTTCTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417299.2 |
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| CDS TCA 72 bp | GACTTCTGCTATAGCTACCAACATAGCTGTGCCACCTaGTTCCATGGATTGGCATCTCCATCACCATCCCTT | + |
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Preference number: 6 (lower is better) Translates to: DFCYSYQHSCAT*FHGLASPSPSL Trigger: AAGGGATGGTGATGGAGATGCCAATCCATGGAATCAGGTGGCACAGCTATGTTGGTAGCTATAGCAGAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417299.2 ENST00000654385.1 |
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| CDS GCA 72 bp | TTCTCCAATGGTACCTTCCTTCCCTGGAGGAATCTTTaGCAAGAAGACTTCTGCTATAGCTACCAACATAGC | + |
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Preference number: 6 (lower is better) Translates to: FSNGTFLPWRNL*QEDFCYSYQHS Trigger: GCTATGTTGGTAGCTATAGCAGAAGTCTTCTTGGCAAAGATTCCTCCAGGGAAGGAAGGTACCATTGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417299.2 ENST00000654385.1 |
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| CDS CCA 72 bp | TTTATGCAAATACCAGCCTTGGTTTTGGTACTAAACTaGGTAACATGTGGGTGTCTGTTTTCCCATGAGTTA | + |
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Preference number: 6 (lower is better) Translates to: FMQIPALVLVLN*VTCGCLFSHEL Trigger: TAACTCATGGGAAAACAGACACCCACATGTTACCCAGTTTAGTACCAAAACCAAGGCTGGTATTTGCATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417299.2 ENST00000654385.1 |
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| CDS CAA 72 bp | CAGTCAAAGCATGTTGAGCATAAAACCAAGTACTACTaGGCAGGGAGGTTTTTATTCCAAAGAACATTAGAT | + |
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Preference number: 6 (lower is better) Translates to: QSKHVEHKTKYY*AGRFLFQRTLD Trigger: ATCTAATGTTCTTTGGAATAAAAACCTCCCTGCCAAGTAGTACTTGGTTTTATGCTCAACATGCTTTGACTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000417299.2 ENST00000654385.1 |
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