Pregenerated sensors for LINC01750 (Homo sapiens)
Ensembl gene IDs: ENSG00000231437Ensembl transcript IDs: ENST00000428461.1, ENST00000438293.1, ENST00000442751.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGTCCGCCCAGCGGCGGGGACTGCGCCCTTTGCGCGCCGCCGCCCTaGGGGTGGGAATCTGGGCCGGACACCTGGCCCTGTGGGCACATG | + |
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Preference number: 5 (lower is better) Translates to: GPPSGGDCALCAPPP*GWESGPDTWPCGHM Trigger: CATGTGCCCACAGGGCCAGGTGTCCGGCCCAGATTCCCACCCTCAGGGCGGCGGCGCGCAAAGGGCGCAGTCCCCGCCGCTGGGCGGACC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000428461.1 ENST00000438293.1 ENST00000442751.1 |
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| CDS CCA 90 bp | CTTCCGGAGCGCCAGGCCGAGATCCAGGATTCCGGGCACCGAGGCTaGAGACACCGGGAAAGCCGGAGCCGCGGGTCCGCCCAGCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: LPERQAEIQDSGHRG*RHRESRSRGSAQRR Trigger: CCGCCGCTGGGCGGACCCGCGGCTCCGGCTTTCCCGGTGTCTCCAGCCTCGGTGCCCGGAATCCTGGATCTCGGCCTGGCGCTCCGGAAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000428461.1 ENST00000438293.1 ENST00000442751.1 |
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| CDS CCA 90 bp | CGGGGACTGCGCCCTTTGCGCGCCGCCGCCCTGAGGGTGGGAATCTaGGCCGGACACCTGGCCCTGTGGGCACATGCTGACCTTCCCACT | + |
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Preference number: 5 (lower is better) Translates to: RGLRPLRAAALRVGI*AGHLALWAHADLPT Trigger: AGTGGGAAGGTCAGCATGTGCCCACAGGGCCAGGTGTCCGGCCCAGATTCCCACCCTCAGGGCGGCGGCGCGCAAAGGGCGCAGTCCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000428461.1 ENST00000438293.1 ENST00000442751.1 |
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| CDS CCA 90 bp | GCCGCCGCCCTGAGGGTGGGAATCTGGGCCGGACACCTGGCCCTGTaGGCACATGCTGACCTTCCCACTCCCCATCCTGGGTCGACGAGG | + |
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Preference number: 5 (lower is better) Translates to: AAALRVGIWAGHLAL*AHADLPTPHPGSTR Trigger: CCTCGTCGACCCAGGATGGGGAGTGGGAAGGTCAGCATGTGCCCACAGGGCCAGGTGTCCGGCCCAGATTCCCACCCTCAGGGCGGCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000428461.1 ENST00000438293.1 ENST00000442751.1 |
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| CDS GCA 90 bp | GATCTCTCAAGCCAAGCGTTCCCCGTCCCTGCTGGGGCACGGAGCTaGCTCGCTTCCGGAGCGCCAGGCCGAGATCCAGGATTCCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: DLSSQAFPVPAGARS*LASGAPGRDPGFRA Trigger: TGCCCGGAATCCTGGATCTCGGCCTGGCGCTCCGGAAGCGAGGCAGCTCCGTGCCCCAGCAGGGACGGGGAACGCTTGGCTTGAGAGATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000428461.1 ENST00000438293.1 |
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| CDS CCA 90 bp | AAAGATTGCGCGGTAGGGGGCCCCACCTTGCCAGGTCGCCGGGCTTaGTCTCAAGCAGGTGCTGCTGCCCTGTGGACAGTCAGCGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: KDCAVGGPTLPGRRA*SQAGAAALWTVSEK Trigger: TTTCTCGCTGACTGTCCACAGGGCAGCAGCACCTGCTTGAGACCAAGCCCGGCGACCTGGCAAGGTGGGGCCCCCTACCGCGCAATCTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS TCA 90 bp | GTAGTGGGTAGACGTGGCGGGAGAGGAGGGCGAATCTCGACCTTCTaGTGGTGCCTTCGTCCTCCGAGAGGAGAGCGGCTCATAGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: VVGRRGGRGGRISTF*WCLRPPRGERLIGG Trigger: CCCACCTATGAGCCGCTCTCCTCTCGGAGGACGAAGGCACCATCAGAAGGTCGAGATTCGCCCTCCTCTCCCGCCACGTCTACCCACTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000428461.1 ENST00000438293.1 ENST00000442751.1 |
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| CDS CCA 90 bp | AGCTTGCCTAACCCAGAGACCACTCCTGGGCATGGATGCAGGTACTaGCCAAATGTTCTTAGCATCATGGAGGGAGGGAAGAATGACTTC | + |
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Preference number: 5 (lower is better) Translates to: SLPNPETTPGHGCRY*PNVLSIMEGGKNDF Trigger: GAAGTCATTCTTCCCTCCCTCCATGATGCTAAGAACATTTGGCCAGTACCTGCATCCATGCCCAGGAGTGGTCTCTGGGTTAGGCAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS TCA 90 bp | CAGGAACATTTTCAATGGACCATGCCCTGGCTGTGCCCAAGGAGGTaGTATTCTGGATATGTGATTGACATTCTCTCCACACCCAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: QEHFQWTMPWLCPRR*YSGYVIDILSTPRN Trigger: ATTTCTGGGTGTGGAGAGAATGTCAATCACATATCCAGAATATCACCTCCTTGGGCACAGCCAGGGCATGGTCCATTGAAAATGTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS GCA 90 bp | CTCATGTTCTCACCACTAAGCCTCCACTGTCTCAGACCTGCAATGTaGTTTTCATGCAAGTTTATACTTAAAGTTCAGCAGCCTTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: LMFSPLSLHCLRPAM*FSCKFILKVQQPLV Trigger: GACCAAAGGCTGCTGAACTTTAAGTATAAACTTGCATGAAAAGCACATTGCAGGTCTGAGACAGTGGAGGCTTAGTGGTGAGAACATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CCA 90 bp | CAATGTGCTTTTCATGCAAGTTTATACTTAAAGTTCAGCAGCCTTTaGTCTTGGCATCTTCCTGAGCCAAGCCATAGTTTGGCTAAAACA | + |
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Preference number: 5 (lower is better) Translates to: QCAFHASLYLKFSSL*SWHLPEPSHSLAKT Trigger: TGTTTTAGCCAAACTATGGCTTGGCTCAGGAAGATGCCAAGACCAAAGGCTGCTGAACTTTAAGTATAAACTTGCATGAAAAGCACATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS TCA 90 bp | TTTTGCAGTGTGGGGACAATAGCTGGACTGTCTTTCTTTACTTGTTaGTTCACCAAAGCAATTAATGACTTTGTAGCTGAGTCTCCTACA | + |
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Preference number: 5 (lower is better) Translates to: FCSVGTIAGLSFFTC*FTKAINDFVAESPT Trigger: TGTAGGAGACTCAGCTACAAAGTCATTAATTGCTTTGGTGAATCAACAAGTAAAGAAAGACAGTCCAGCTATTGTCCCCACACTGCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS GCA 90 bp | TTTTCCATTCAGCCAGTGGATGGAGAAAGAAAGAACATGCTAAATTaGCCTAGATGTTTTTCATGGGACTGGCCTATATTACTTTGGCTA | + |
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Preference number: 5 (lower is better) Translates to: FSIQPVDGERKNMLN*PRCFSWDWPILLWL Trigger: TAGCCAAAGTAATATAGGCCAGTCCCATGAAAAACATCTAGGGCAATTTAGCATGTTCTTTCTTTCTCCATCCACTGGCTGAATGGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CCA 90 bp | GAAAGAAAGAACATGCTAAATTGCCCTAGATGTTTTTCATGGGACTaGCCTATATTACTTTGGCTAGAACTTAGTCAGATGACCAAACCT | + |
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Preference number: 5 (lower is better) Translates to: ERKNMLNCPRCFSWD*PILLWLELSQMTKP Trigger: AGGTTTGGTCATCTGACTAAGTTCTAGCCAAAGTAATATAGGCCAGTCCCATGAAAAACATCTAGGGCAATTTAGCATGTTCTTTCTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS GCA 90 bp | CCTATATTACTTTGGCTAGAACTTAGTCAGATGACCAAACCTAACTaGAAGAGAACCTGGGAAAGTAATCTAACTGTATCTACAGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: PILLWLELSQMTKPN*KRTWESNLTVSTEK Trigger: CTTTTCTGTAGATACAGTTAGATTACTTTCCCAGGTTCTCTTGCAGTTAGGTTTGGTCATCTGACTAAGTTCTAGCCAAAGTAATATAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CAA 90 bp | GAAAGCCGGAGCCGCGGGTCCGCCCAGCGGCGGGGACTGCGCCCTTaGCGCGCCGCCGCCCTGAGGGTGGGAATCTGGGCCGGACACCTG | + |
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Preference number: 6 (lower is better) Translates to: ESRSRGSAQRRGLRP*RAAALRVGIWAGHL Trigger: CAGGTGTCCGGCCCAGATTCCCACCCTCAGGGCGGCGGCGCGCAAAGGGCGCAGTCCCCGCCGCTGGGCGGACCCGCGGCTCCGGCTTTC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000428461.1 ENST00000438293.1 ENST00000442751.1 |
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| CDS TCA 72 bp | AGCGGCGGGGACTGCGCCCTTTGCGCGCCGCCGCCCTaGGGGTGGGAATCTGGGCCGGACACCTGGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SGGDCALCAPPP*GWESGPDTWPC Trigger: ACAGGGCCAGGTGTCCGGCCCAGATTCCCACCCTCAGGGCGGCGGCGCGCAAAGGGCGCAGTCCCCGCCGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000428461.1 ENST00000438293.1 ENST00000442751.1 |
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| CDS CCA 72 bp | CGCCAGGCCGAGATCCAGGATTCCGGGCACCGAGGCTaGAGACACCGGGAAAGCCGGAGCCGCGGGTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: RQAEIQDSGHRG*RHRESRSRGSA Trigger: GGCGGACCCGCGGCTCCGGCTTTCCCGGTGTCTCCAGCCTCGGTGCCCGGAATCCTGGATCTCGGCCTGGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000428461.1 ENST00000438293.1 ENST00000442751.1 |
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| CDS GCA 72 bp | AAGCAGGTGCTGCTGCCCTTGCCACGCTCACCCCCGTaGCCACCCTCGCTGGCACACGCGCTCACACCCGCG | + |
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Preference number: 6 (lower is better) Translates to: KQVLLPLPRSPP*PPSLAHALTPA Trigger: CGCGGGTGTGAGCGCGTGTGCCAGCGAGGGTGGGCACGGGGGTGAGCGTGGCAAGGGCAGCAGCACCTGCTT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000428461.1 |
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| CDS CCA 72 bp | CGCCCTTTGCGCGCCGCCGCCCTGAGGGTGGGAATCTaGGCCGGACACCTGGCCCTGTGGGCACATGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: RPLRAAALRVGI*AGHLALWAHAD Trigger: GTCAGCATGTGCCCACAGGGCCAGGTGTCCGGCCCAGATTCCCACCCTCAGGGCGGCGGCGCGCAAAGGGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000428461.1 ENST00000438293.1 ENST00000442751.1 |
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| CDS GCA 72 bp | AGCCAAGCGTTCCCCGTCCCTGCTGGGGCACGGAGCTaGCTCGCTTCCGGAGCGCCAGGCCGAGATCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SQAFPVPAGARS*LASGAPGRDPG Trigger: TCCTGGATCTCGGCCTGGCGCTCCGGAAGCGAGGCAGCTCCGTGCCCCAGCAGGGACGGGGAACGCTTGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000428461.1 ENST00000438293.1 |
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| CDS CAA 72 bp | CGCGGTAGGGGGCCCCACCTTGCCAGGTCGCCGGGCTaGGTCTCAAGCAGGTGCTGCTGCCCTTGCCACGCT | + |
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Preference number: 6 (lower is better) Translates to: RGRGPHLARSPG*VSSRCCCPCHA Trigger: AGCGTGGCAAGGGCAGCAGCACCTGCTTGAGACCAAGCCCGGCGACCTGGCAAGGTGGGGCCCCCTACCGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428461.1 |
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| CDS CAA 72 bp | CGCGGTAGGGGGCCCCACCTTGCCAGGTCGCCGGGCTaGGTCTCAAGCAGGTGCTGCTGCCCTGTGGACAGT | + |
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Preference number: 6 (lower is better) Translates to: RGRGPHLARSPG*VSSRCCCPVDS Trigger: ACTGTCCACAGGGCAGCAGCACCTGCTTGAGACCAAGCCCGGCGACCTGGCAAGGTGGGGCCCCCTACCGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CAA 72 bp | GCCAGCCGCAAAGATTGCGCGGTAGGGGGCCCCACCTaGCCAGGTCGCCGGGCTTGGTCTCAAGCAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: ASRKDCAVGGPT*PGRRAWSQAGA Trigger: AGCACCTGCTTGAGACCAAGCCCGGCGACCTGGCAAGGTGGGGCCCCCTACCGCGCAATCTTTGCGGCTGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000428461.1 ENST00000438293.1 ENST00000442751.1 |
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| CDS TCA 72 bp | TCCCCCGGGTACCTCTTCAGCCTCTGCACTCGGAGCTaGGAGCCGGGGGCCAGCCGCAAAGATTGCGCGGTA | + |
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Preference number: 6 (lower is better) Translates to: SPGYLFSLCTRS*EPGASRKDCAV Trigger: TACCGCGCAATCTTTGCGGCTGGCCCCCGGCTCTCAGCTCCGAGTGCAGAGGCTGAAGAGGTACCCGGGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000428461.1 ENST00000438293.1 ENST00000442751.1 |
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| CDS CAA 90 bp | CAAAGATTGCGCGGTAGGGGGCCCCACCTTGCCAGGTCGCCGGGCTaGGTCTCAAGCAGGTGCTGCTGCCCTGTGGACAGTCAGCGAGAA | + |
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Preference number: 6 (lower is better) Translates to: QRLRGRGPHLARSPG*VSSRCCCPVDSQRE Trigger: TTCTCGCTGACTGTCCACAGGGCAGCAGCACCTGCTTGAGACCAAGCCCGGCGACCTGGCAAGGTGGGGCCCCCTACCGCGCAATCTTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS TCA 72 bp | AGACGTGGCGGGAGAGGAGGGCGAATCTCGACCTTCTaGTGGTGCCTTCGTCCTCCGAGAGGAGAGCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: RRGGRGGRISTF*WCLRPPRGERL Trigger: GAGCCGCTCTCCTCTCGGAGGACGAAGGCACCATCAGAAGGTCGAGATTCGCCCTCCTCTCCCGCCACGTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000428461.1 ENST00000438293.1 ENST00000442751.1 |
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| CDS GCA 72 bp | CACCTTGCCAGGTCGCCGGGCTTGGTCTCAAGCAGGTaGTGCTGCCCTGTGGACAGTCAGCGAGAAATAGAC | + |
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Preference number: 6 (lower is better) Translates to: HLARSPGLVSSR*CCPVDSQREID Trigger: GTCTATTTCTCGCTGACTGTCCACAGGGCAGCAGCACCTGCTTGAGACCAAGCCCGGCGACCTGGCAAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS GCA 72 bp | CTTGCCAGGTCGCCGGGCTTGGTCTCAAGCAGGTGCTaGTGCCCTGTGGACAGTCAGCGAGAAATAGACACA | + |
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Preference number: 6 (lower is better) Translates to: LARSPGLVSSRC*CPVDSQREIDT Trigger: TGTGTCTATTTCTCGCTGACTGTCCACAGGGCAGCAGCACCTGCTTGAGACCAAGCCCGGCGACCTGGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS GCA 72 bp | GGAGGAAATGGAGAGAAATGGGCTGAAGCTCAAGGCTaGAGAAATGGGGTTGCACAGAATGGAGAGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GGNGEKWAEAQG*RNGVAQNGERS Trigger: GCTCCTCTCTCCATTCTGTGCAACCCCATTTCTGCAGCCTTGAGCTTCAGCCCATTTCTCTCCATTTCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS GCA 72 bp | CCTGGGACCCCAAACTTTCCCCATTACTTTGATGAATaGTTGAAGTACCATCCACTCTATTTCACTGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: PGTPNFPHYFDE*LKYHPLYFTAL Trigger: CAAGGCAGTGAAATAGAGTGGATGGTACTTCAAGCATTCATCAAAGTAATGGGGAAAGTTTGGGGTCCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CCA 72 bp | ATGGATGCAGGTACTGGCCAAATGTTCTTAGCATCATaGAGGGAGGGAAGAATGACTTCTCTTCTAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: MDAGTGQMFLAS*REGRMTSLLER Trigger: TCTTTCTAGAAGAGAAGTCATTCTTCCCTCCCTCCATGATGCTAAGAACATTTGGCCAGTACCTGCATCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CAA 72 bp | GGATTTTGTGGAGAAGTCCAGAAGCCTCTTATGATTTaGCAGTGTGGGGACAATAGCTGGACTGTCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GFCGEVQKPLMI*QCGDNSWTVFL Trigger: AAGAAAGACAGTCCAGCTATTGTCCCCACACTGCAAAATCATAAGAGGCTTCTGGACTTCTCCACAAAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CCA 72 bp | GCAAGTTTATACTTAAAGTTCAGCAGCCTTTGGTCTTaGCATCTTCCTGAGCCAAGCCATAGTTTGGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: ASLYLKFSSLWS*HLPEPSHSLAK Trigger: TTTAGCCAAACTATGGCTTGGCTCAGGAAGATGCCAAGACCAAAGGCTGCTGAACTTTAAGTATAAACTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS GCA 72 bp | AAAATGCACTTGAGTATAAGTATCATAGATGTGCAATaGTGGAAAGGCCTTGGTGCTCATGAGCTATGTCTC | + |
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Preference number: 6 (lower is better) Translates to: KMHLSISIIDVQ*WKGLGAHELCL Trigger: GAGACATAGCTCATGAGCACCAAGGCCTTTCCAGCATTGCACATCTATGATACTTATACTCAAGTGCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS GCA 72 bp | CAGCCAGTGGATGGAGAAAGAAAGAACATGCTAAATTaGCCTAGATGTTTTTCATGGGACTGGCCTATATTA | + |
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Preference number: 6 (lower is better) Translates to: QPVDGERKNMLN*PRCFSWDWPIL Trigger: TAATATAGGCCAGTCCCATGAAAAACATCTAGGGCAATTTAGCATGTTCTTTCTTTCTCCATCCACTGGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CCA 72 bp | TTTCATGCAAGTTTATACTTAAAGTTCAGCAGCCTTTaGTCTTGGCATCTTCCTGAGCCAAGCCATAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: FHASLYLKFSSL*SWHLPEPSHSL Trigger: CAAACTATGGCTTGGCTCAGGAAGATGCCAAGACCAAAGGCTGCTGAACTTTAAGTATAAACTTGCATGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CCA 72 bp | ATGCACTTGAGTATAAGTATCATAGATGTGCAATGCTaGAAAGGCCTTGGTGCTCATGAGCTATGTCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: MHLSISIIDVQC*KGLGAHELCLF Trigger: AAAGAGACATAGCTCATGAGCACCAAGGCCTTTCCAGCATTGCACATCTATGATACTTATACTCAAGTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CAA 90 bp | AAAGAATTCTGTAAGAGCCATGAGGACTCATCTTTAATGAGGATTTaGTGGAGAAGTCCAGAAGCCTCTTATGATTTTGCAGTGTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: KEFCKSHEDSSLMRI*WRSPEASYDFAVWG Trigger: TCCCCACACTGCAAAATCATAAGAGGCTTCTGGACTTCTCCACAAAATCCTCATTAAAGATGAGTCCTCATGGCTCTTACAGAATTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS TCA 72 bp | GTGGGGACAATAGCTGGACTGTCTTTCTTTACTTGTTaGTTCACCAAAGCAATTAATGACTTTGTAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: VGTIAGLSFFTC*FTKAINDFVAE Trigger: CTCAGCTACAAAGTCATTAATTGCTTTGGTGAATCAACAAGTAAAGAAAGACAGTCCAGCTATTGTCCCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CAA 72 bp | TGTAAGAGCCATGAGGACTCATCTTTAATGAGGATTTaGTGGAGAAGTCCAGAAGCCTCTTATGATTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: CKSHEDSSLMRI*WRSPEASYDFA Trigger: TGCAAAATCATAAGAGGCTTCTGGACTTCTCCACAAAATCCTCATTAAAGATGAGTCCTCATGGCTCTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CCA 72 bp | AACATGCTAAATTGCCCTAGATGTTTTTCATGGGACTaGCCTATATTACTTTGGCTAGAACTTAGTCAGATG | + |
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Preference number: 6 (lower is better) Translates to: NMLNCPRCFSWD*PILLWLELSQM Trigger: CATCTGACTAAGTTCTAGCCAAAGTAATATAGGCCAGTCCCATGAAAAACATCTAGGGCAATTTAGCATGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CAA 90 bp | AAAGGCCTTGGTGCTCATGAGCTATGTCTCTTTACCAAGAAGAGGTaGGTATATAAAATTAGTGTCCAAGTTTCCCTATTACAACACTTT | + |
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Preference number: 6 (lower is better) Translates to: KGLGAHELCLFTKKR*VYKISVQVSLLQHF Trigger: AAAGTGTTGTAATAGGGAAACTTGGACACTAATTTTATATACCAACCTCTTCTTGGTAAAGAGACATAGCTCATGAGCACCAAGGCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CAA 90 bp | TGGAGGGAGGGAAGAATGACTTCTCTTCTAGAAAGATGGATTTTGTaGGCCATAACAAAGGTGCAATCACAGAAATATTTACAGATGAAA | + |
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Preference number: 6 (lower is better) Translates to: WREGRMTSLLERWIL*AITKVQSQKYLQMK Trigger: TTTCATCTGTAAATATTTCTGTGATTGCACCTTTGTTATGGCCAACAAAATCCATCTTTCTAGAAGAGAAGTCATTCTTCCCTCCCTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CAA 90 bp | ATTTATTTATTTATTTATTTTGCGTATTTCACAGTTCAAAGGAAGTaGGGAGGGACCTCTACTTCACATAGTCACCCAGGGACCCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: IYLFIYFAYFTVQRK*GGTSTSHSHPGTQV Trigger: AACTTGGGTCCCTGGGTGACTATGTGAAGTAGAGGTCCCTCCCAACTTCCTTTGAACTGTGAAATACGCAAAATAAATAAATAAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CCA 72 bp | AGAAAGAACATGCTAAATTGCCCTAGATGTTTTTCATaGGACTGGCCTATATTACTTTGGCTAGAACTTAGT | + |
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Preference number: 6 (lower is better) Translates to: RKNMLNCPRCFS*DWPILLWLELS Trigger: ACTAAGTTCTAGCCAAAGTAATATAGGCCAGTCCCATGAAAAACATCTAGGGCAATTTAGCATGTTCTTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CAA 72 bp | GGTGCTCATGAGCTATGTCTCTTTACCAAGAAGAGGTaGGTATATAAAATTAGTGTCCAAGTTTCCCTATTA | + |
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Preference number: 6 (lower is better) Translates to: GAHELCLFTKKR*VYKISVQVSLL Trigger: TAATAGGGAAACTTGGACACTAATTTTATATACCAACCTCTTCTTGGTAAAGAGACATAGCTCATGAGCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS TCA 72 bp | ATGATTGGCCATGAGTTGGTAACTTTCAAAGCTAAATaGCAAGTTCATGGGGGTATATTATACAATTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: MIGHELVTFKAK*QVHGGILYNSF Trigger: GAAAGAATTGTATAATATACCCCCATGAACTTGTCATTTAGCTTTGAAAGTTACCAACTCATGGCCAATCAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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| CDS CAA 72 bp | GGAAGAATGACTTCTCTTCTAGAAAGATGGATTTTGTaGGCCATAACAAAGGTGCAATCACAGAAATATTTA | + |
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Preference number: 6 (lower is better) Translates to: GRMTSLLERWIL*AITKVQSQKYL Trigger: TAAATATTTCTGTGATTGCACCTTTGTTATGGCCAACAAAATCCATCTTTCTAGAAGAGAAGTCATTCTTCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438293.1 |
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