Pregenerated sensors for LINC01747 (Homo sapiens)
Ensembl gene IDs: ENSG00000230400Ensembl transcript IDs: ENST00000437696.2, ENST00000441568.2, ENST00000634603.2, ENST00000653432.1, ENST00000658267.1, ENST00000667287.1
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGCGTGGAACAGTCTTCCTCACAGTCCTCGGAAGGAACCAGCCCTaGCCACACCTTGATCTCAGACTTCCAGCATCGGCACGGTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: RRGTVFLTVLGRNQP*PHLDLRLPASARSG Trigger: CCCTGACCGTGCCGATGCTGGAAGTCTGAGATCAAGGTGTGGGCAGGGCTGGTTCCTTCCGAGGACTGTGAGGAAGACTGTTCCACGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS CCA 90 bp | CAATGGAAAGGTTGCCTGCAAACCACCCGGAGCTGCAGAGAGGCGTaGAACAGTCTTCCTCACAGTCCTCGGAAGGAACCAGCCCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: QWKGCLQTTRSCREA*NSLPHSPRKEPALP Trigger: GGGCAGGGCTGGTTCCTTCCGAGGACTGTGAGGAAGACTGTTCCACGCCTCTCTGCAGCTCCGGGTGGTTTGCAGGCAACCTTTCCATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS CCA 90 bp | TCAGTGGAGACAGGTTTGTCTGCAGTGACGCTGTCAAGGCTCCTTTaGATTCTTCTGACTGCCGGCGTCGCCTCCCCAGGCATCACCGAG | + |
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Preference number: 5 (lower is better) Translates to: SVETGLSAVTLSRLL*ILLTAGVASPGITE Trigger: CTCGGTGATGCCTGGGGAGGCGACGCCGGCAGTCAGAAGAATCCAAAGGAGCCTTGACAGCGTCACTGCAGACAAACCTGTCTCCACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS GCA 90 bp | TTTGTCTGCAGTGACGCTGTCAAGGCTCCTTTGGATTCTTCTGACTaGCGGCGTCGCCTCCCCAGGCATCACCGAGCCTTTTCTTGCTAC | + |
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Preference number: 5 (lower is better) Translates to: FVCSDAVKAPLDSSD*RRRLPRHHRAFSCY Trigger: GTAGCAAGAAAAGGCTCGGTGATGCCTGGGGAGGCGACGCCGGCAGTCAGAAGAATCCAAAGGAGCCTTGACAGCGTCACTGCAGACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS GCA 90 bp | CTGCAAAGCCAGCAATGGAAAGGTTGCCTGCAAACCACCCGGAGCTaGAGAGAGGCGTGGAACAGTCTTCCTCACAGTCCTCGGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LQSQQWKGCLQTTRS*REAWNSLPHSPRKE Trigger: TTCCTTCCGAGGACTGTGAGGAAGACTGTTCCACGCCTCTCTGCAGCTCCGGGTGGTTTGCAGGCAACCTTTCCATTGCTGGCTTTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS TCA 90 bp | AGTCTTCCTCACAGTCCTCGGAAGGAACCAGCCCTGCCCACACCTTaGTCTCAGACTTCCAGCATCGGCACGGTCAGGGTCTGTTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: SLPHSPRKEPALPTP*SQTSSIGTVRVCCF Trigger: AAAACAACAGACCCTGACCGTGCCGATGCTGGAAGTCTGAGATCAAGGTGTGGGCAGGGCTGGTTCCTTCCGAGGACTGTGAGGAAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS GCA 90 bp | GGAAGGGTCCGGACACAATGCCGGCTCATGGTTGTTTTCCATTCCTaGTCTGACTCCCAGGCTGCAATGCAGTCAAAGCCCTTTGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: GRVRTQCRLMVVFHS*SDSQAAMQSKPFEL Trigger: GAGCTCAAAGGGCTTTGACTGCATTGCAGCCTGGGAGTCAGAGCAGGAATGGAAAACAACCATGAGCCGGCATTGTGTCCGGACCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437696.2 ENST00000667287.1 |
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| CDS GCA 90 bp | GACAGGCAGAGTCTGAGTAGGGCAGTCAGTGGAGACAGGTTTGTCTaGAGTGACGCTGTCAAGGCTCCTTTGGATTCTTCTGACTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: DRQSLSRAVSGDRFV*SDAVKAPLDSSDCR Trigger: CCGGCAGTCAGAAGAATCCAAAGGAGCCTTGACAGCGTCACTGCAGACAAACCTGTCTCCACTGACTGCCCTACTCAGACTCTGCCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS TCA 90 bp | ATGGGGTGGTTAGCCATGTGGGCAATGGGTCTAGACAGCCAGGTTTaGATCCCTCCTCACCTTTTGAGCCCTCTGTGCCTTGGTTTACCT | + |
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Preference number: 5 (lower is better) Translates to: MGWLAMWAMGLDSQV*IPPHLLSPLCLGLP Trigger: AGGTAAACCAAGGCACAGAGGGCTCAAAAGGTGAGGAGGGATTCAAACCTGGCTGTCTAGACCCATTGCCCACATGGCTAACCACCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000437696.2 ENST00000667287.1 |
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| CDS TCA 90 bp | CACACACAGGGAGAGAGCCATGTGAACATGAGGGCAGAGACTGGGTaGTGTGTCTGCAAAGCCAGCAATGGAAAGGTTGCCTGCAAACCA | + |
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Preference number: 5 (lower is better) Translates to: HTQGESHVNMRAETG*CVCKASNGKVACKP Trigger: TGGTTTGCAGGCAACCTTTCCATTGCTGGCTTTGCAGACACATCACCCAGTCTCTGCCCTCATGTTCACATGGCTCTCTCCCTGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS GCA 90 bp | CCTTCACCTCTCAGCCCACTTGTCTCCTGTTCGGGGGAGCTCATCTaGTCATGTCTGCCTCTTTGTCTGGGTTTTATCTCTCCACATGCA | + |
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Preference number: 5 (lower is better) Translates to: PSPLSPLVSCSGELI*SCLPLCLGFISPHA Trigger: TGCATGTGGAGAGATAAAACCCAGACAAAGAGGCAGACATGAGCAGATGAGCTCCCCCGAACAGGAGACAAGTGGGCTGAGAGGTGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000437696.2 ENST00000441568.2 ENST00000634603.2 ENST00000653432.1 ENST00000658267.1 ENST00000667287.1 |
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| CDS CCA 90 bp | CACACACACACAGGGAGAGAGCCATGTGAACATGAGGGCAGAGACTaGGTGATGTGTCTGCAAAGCCAGCAATGGAAAGGTTGCCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: HTHTGREPCEHEGRD*VMCLQSQQWKGCLQ Trigger: TTGCAGGCAACCTTTCCATTGCTGGCTTTGCAGACACATCACCCAGTCTCTGCCCTCATGTTCACATGGCTCTCTCCCTGTGTGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS GCA 90 bp | TGTCCGGTCTGCACACATCTCTCCATTGTGAAGGGCATTCAAGTTTaGCCTCTCTCACCCTGGTCCTCAGAAGCTAATGGGTCACTTTCC | + |
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Preference number: 5 (lower is better) Translates to: CPVCTHLSIVKGIQV*PLSPWSSEANGSLS Trigger: GGAAAGTGACCCATTAGCTTCTGAGGACCAGGGTGAGAGAGGGCAAACTTGAATGCCCTTCACAATGGAGAGATGTGTGCAGACCGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000437696.2 ENST00000441568.2 ENST00000634603.2 ENST00000653432.1 ENST00000658267.1 ENST00000667287.1 |
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| CDS GCA 90 bp | CCCTGGCTGTTCCTGCACACTAGCCACTTACATTGCAGCTACCTGTaGACTGATAAAGGAACTGATGTCTGTCCGGTCTGCACACATCTC | + |
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Preference number: 5 (lower is better) Translates to: PWLFLHTSHLHCSYL*TDKGTDVCPVCTHL Trigger: GAGATGTGTGCAGACCGGACAGACATCAGTTCCTTTATCAGTGCACAGGTAGCTGCAATGTAAGTGGCTAGTGTGCAGGAACAGCCAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653432.1 |
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| CDS GCA 90 bp | TATCCTTCAGCTCCCTGGCTGTTCCTGCACACTAGCCACTTACATTaGAGCTACCTGTGCACTGATAAAGGAACTGATGTCTGTCCGGTC | + |
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Preference number: 5 (lower is better) Translates to: YPSAPWLFLHTSHLH*SYLCTDKGTDVCPV Trigger: GACCGGACAGACATCAGTTCCTTTATCAGTGCACAGGTAGCTGCAATGTAAGTGGCTAGTGTGCAGGAACAGCCAGGGAGCTGAAGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653432.1 |
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| CDS TCA 90 bp | ATAAAGGAACTGATGTCTGTCCGGTCTGCACACATCTCTCCATTGTaGAGGGCATTCAAGTTTGCCCTCTCTCACCCTGGTCCTCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: IKELMSVRSAHISPL*RAFKFALSHPGPQK Trigger: CTTCTGAGGACCAGGGTGAGAGAGGGCAAACTTGAATGCCCTTCACAATGGAGAGATGTGTGCAGACCGGACAGACATCAGTTCCTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000437696.2 ENST00000441568.2 ENST00000634603.2 ENST00000653432.1 ENST00000658267.1 ENST00000667287.1 |
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| CDS TCA 90 bp | GTTCCTTGGTTCCTGGACAGCTTTTCTGCTCTGGATCAGCTCAGCTaGAACTGGGTTATCTTAGACAGTCTCACTCACATGCCTGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: VPWFLDSFSALDQLS*NWVILDSLTHMPGG Trigger: ACCACCAGGCATGTGAGTGAGACTGTCTAAGATAACCCAGTTTCAGCTGAGCTGATCCAGAGCAGAAAAGCTGTCCAGGAACCAAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000634603.2 ENST00000658267.1 |
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| CDS GCA 90 bp | TGCAGCTACCTGTGCACTGATAAAGGAACTGATGTCTGTCCGGTCTaGACACATCTCTCCATTGTGAAGGGCATTCAAGTTTGCCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: CSYLCTDKGTDVCPV*THLSIVKGIQVCPL Trigger: GAGAGGGCAAACTTGAATGCCCTTCACAATGGAGAGATGTGTGCAGACCGGACAGACATCAGTTCCTTTATCAGTGCACAGGTAGCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000437696.2 ENST00000441568.2 ENST00000634603.2 ENST00000653432.1 ENST00000658267.1 ENST00000667287.1 |
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| CDS TCA 90 bp | GGAAGTGAATGCAATAATGATCGCAGAATGGCAGTGAGCGTTTACTaGGGCACCTGCTGTTCTAAGTGCATTAAAGGCACACGGTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GSECNNDRRMAVSVY*GTCCSKCIKGTRCR Trigger: CCTGCACCGTGTGCCTTTAATGCACTTAGAACAGCAGGTGCCTCAGTAAACGCTCACTGCCATTCTGCGATCATTATTGCATTCACTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS TCA 90 bp | CAGCAGCCCCAGGAAGTGAATGCAATAATGATCGCAGAATGGCAGTaGGCGTTTACTGAGGCACCTGCTGTTCTAAGTGCATTAAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: QQPQEVNAIMIAEWQ*AFTEAPAVLSALKA Trigger: TGCCTTTAATGCACTTAGAACAGCAGGTGCCTCAGTAAACGCTCACTGCCATTCTGCGATCATTATTGCATTCACTTCCTGGGGCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS TCA 90 bp | CCACATGCAGGCCTGAGACAAGGATTTGGAGGCAAGCAGTTTATTTaGGAGAGGATTCCAGGAAGCATCTGTAAGAGAGTGAGGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: PHAGLRQGFGGKQFI*ERIPGSICKRVRKR Trigger: CCTCTTCCTCACTCTCTTACAGATGCTTCCTGGAATCCTCTCTCAAATAAACTGCTTGCCTCCAAATCCTTGTCTCAGGCCTGCATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653432.1 |
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| CDS GCA 90 bp | ATGTCTGCCTCTTTGTCTGGGTTTTATCTCTCCACATGCAGGCATTaGAGCTACCTGTGCACTGATAAAGGAACTGATGTCTGTCCGGTC | + |
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Preference number: 5 (lower is better) Translates to: MSASLSGFYLSTCRH*SYLCTDKGTDVCPV Trigger: GACCGGACAGACATCAGTTCCTTTATCAGTGCACAGGTAGCTGCAATGCCTGCATGTGGAGAGATAAAACCCAGACAAAGAGGCAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437696.2 ENST00000658267.1 |
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| CDS CCA 90 bp | CATCTCTCCATTGTGAAGGGCATTCAAGTTTGCCCTCTCTCACCCTaGTCCTCAGAAGCTAATGGGTCACTTTCCCAAATTGAAGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: HLSIVKGIQVCPLSP*SSEANGSLSQIEAP Trigger: TGGAGCTTCAATTTGGGAAAGTGACCCATTAGCTTCTGAGGACCAGGGTGAGAGAGGGCAAACTTGAATGCCCTTCACAATGGAGAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000437696.2 ENST00000441568.2 ENST00000634603.2 ENST00000653432.1 ENST00000658267.1 ENST00000667287.1 |
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| CDS GCA 90 bp | CATCTGCTCATGTCTGCCTCTTTGTCTGGGTTTTATCTCTCCACATaGAGGCATTGCAGCTACCTGTGCACTGATAAAGGAACTGATGTC | + |
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Preference number: 5 (lower is better) Translates to: HLLMSASLSGFYLST*RHCSYLCTDKGTDV Trigger: GACATCAGTTCCTTTATCAGTGCACAGGTAGCTGCAATGCCTGCATGTGGAGAGATAAAACCCAGACAAAGAGGCAGACATGAGCAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437696.2 ENST00000658267.1 |
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| CDS GCA 90 bp | GAGAATGAAGCCAAAGTGTTTATCCTTCAGCTCCCTGGCTGTTCCTaGACACTAGCCACTTACATTGCAGCTACCTGTGCACTGATAAAG | + |
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Preference number: 5 (lower is better) Translates to: ENEAKVFILQLPGCS*TLATYIAATCALIK Trigger: CTTTATCAGTGCACAGGTAGCTGCAATGTAAGTGGCTAGTGTGCAGGAACAGCCAGGGAGCTGAAGGATAAACACTTTGGCTTCATTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653432.1 |
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| CDS CCA 90 bp | CAGGTTAGAATAAATCTGCCCAGAGACAGAAACAGAAGCCACATGTaGGAGGAAATATCGATGGTCAACACTGACAGGGAAGAGGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: QVRINLPRDRNRSHM*EEISMVNTDREEGS Trigger: AGACCCCTCTTCCCTGTCAGTGTTGACCATCGATATTTCCTCCCACATGTGGCTTCTGTTTCTGTCTCTGGGCAGATTTATTCTAACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS TCA 90 bp | CATGTCTGCCTCTTTGTCTGGGTTTTATCTCTCCACATGCAGGCCTaGGACAAGGATTTGGAGGCAAGCAGTTTATTTGAGAGAGGATTC | + |
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Preference number: 5 (lower is better) Translates to: HVCLFVWVLSLHMQA*DKDLEASSLFERGF Trigger: GAATCCTCTCTCAAATAAACTGCTTGCCTCCAAATCCTTGTCTCAGGCCTGCATGTGGAGAGATAAAACCCAGACAAAGAGGCAGACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000441568.2 ENST00000634603.2 ENST00000653432.1 ENST00000667287.1 |
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| CDS GCA 90 bp | TTGGAGGCAAGCAGTTTATTTGAGAGAGGATTCCAGGAAGCATATTaGAGCTACCTGTGCACTGATAAAGGAACTGATGTCTGTCCGGTC | + |
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Preference number: 5 (lower is better) Translates to: LEASSLFERGFQEAY*SYLCTDKGTDVCPV Trigger: GACCGGACAGACATCAGTTCCTTTATCAGTGCACAGGTAGCTGCAATATGCTTCCTGGAATCCTCTCTCAAATAAACTGCTTGCCTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441568.2 ENST00000634603.2 ENST00000667287.1 |
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| CDS GCA 90 bp | CATCTGCTCATGTCTGCCTCTTTGTCTGGGTTTTATCTCTCCACATaGAGGCCTGAGACAAGGATTTGGAGGCAAGCAGTTTATTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: HLLMSASLSGFYLST*RPETRIWRQAVYLR Trigger: TCTCAAATAAACTGCTTGCCTCCAAATCCTTGTCTCAGGCCTGCATGTGGAGAGATAAAACCCAGACAAAGAGGCAGACATGAGCAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000441568.2 ENST00000634603.2 ENST00000653432.1 ENST00000667287.1 |
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| CDS CCA 90 bp | TTGTCTGGGTTTTATCTCTCCACATGCAGGCCTGAGACAAGGATTTaGAGGCAAGCAGTTTATTTGAGAGAGGATTCCAGGAAGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: LSGFYLSTCRPETRI*RQAVYLREDSRKHL Trigger: CAGATGCTTCCTGGAATCCTCTCTCAAATAAACTGCTTGCCTCCAAATCCTTGTCTCAGGCCTGCATGTGGAGAGATAAAACCCAGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653432.1 |
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| CDS GCA 90 bp | AGTTTATTTGAGAGAGGATTCCAGGAAGCATATTGCAGCTACCTGTaGACTGATAAAGGAACTGATGTCTGTCCGGTCTGCACACATCTC | + |
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Preference number: 5 (lower is better) Translates to: SLFERGFQEAYCSYL*TDKGTDVCPVCTHL Trigger: GAGATGTGTGCAGACCGGACAGACATCAGTTCCTTTATCAGTGCACAGGTAGCTGCAATATGCTTCCTGGAATCCTCTCTCAAATAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441568.2 ENST00000634603.2 ENST00000667287.1 |
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| CDS CCA 90 bp | GAGGGGTCTACGGTTCAGTTCTCAAGACATGCAAATGAAAGTACGTaGAGGCATTTCATGGTAAATAAAGTTCTAGGGGTAGGATGGCAG | + |
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Preference number: 5 (lower is better) Translates to: EGSTVQFSRHANEST*RHFMVNKVLGVGWQ Trigger: CTGCCATCCTACCCCTAGAACTTTATTTACCATGAAATGCCTCCACGTACTTTCATTTGCATGTCTTGAGAACTGAACCGTAGACCCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS CCA 90 bp | TTGTCTGGGTTTTATCTCTCCACATGCAGGCCTGAGACAAGGATTTaGAGGCAAGCAGTTTATTTGAGAGAGGATTCCAGGAAGCATATT | + |
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Preference number: 5 (lower is better) Translates to: LSGFYLSTCRPETRI*RQAVYLREDSRKHI Trigger: AATATGCTTCCTGGAATCCTCTCTCAAATAAACTGCTTGCCTCCAAATCCTTGTCTCAGGCCTGCATGTGGAGAGATAAAACCCAGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441568.2 ENST00000634603.2 ENST00000667287.1 |
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| CDS GCA 90 bp | AAAATTACTTATCTGTCAGGTTCCTTGGTTCCTGGACAGCTTTTCTaGTCTGGATCAGCTCAGCTGAAACTGGGTTATCTTAGACAGTCT | + |
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Preference number: 5 (lower is better) Translates to: KITYLSGSLVPGQLF*SGSAQLKLGYLRQS Trigger: AGACTGTCTAAGATAACCCAGTTTCAGCTGAGCTGATCCAGAGCAGAAAAGCTGTCCAGGAACCAAGGAACCTGACAGATAAGTAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000634603.2 ENST00000658267.1 |
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| CDS CCA 90 bp | AGTACGTGGAGGCATTTCATGGTAAATAAAGTTCTAGGGGTAGGATaGCAGGGTCATTTATGCATGGTTGTGCTATTTCATAACAGAACA | + |
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Preference number: 5 (lower is better) Translates to: STWRHFMVNKVLGVG*QGHLCMVVLFHNRT Trigger: TGTTCTGTTATGAAATAGCACAACCATGCATAAATGACCCTGCCATCCTACCCCTAGAACTTTATTTACCATGAAATGCCTCCACGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS TCA 90 bp | GTGCTCAAGGAGGCTACAATTAAGTTGGAATATATAAAGGAGTTGTaGAGGTGTCATATCAGGCAGTTTTTGCTGGATAAGAGACCAATT | + |
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Preference number: 5 (lower is better) Translates to: VLKEATIKLEYIKEL*RCHIRQFLLDKRPI Trigger: AATTGGTCTCTTATCCAGCAAAAACTGCCTGATATGACACCTTCACAACTCCTTTATATATTCCAACTTAATTGTAGCCTCCTTGAGCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000634603.2 ENST00000658267.1 |
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| CDS GCA 90 bp | CCCTTCTTTGTGTCAGACAATTTTCCAGTGATGCCATTTAATCCCTaGAAACCTATGAGTAGGATTTTACAGTATTTGCTTTCATCCTAC | + |
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Preference number: 5 (lower is better) Translates to: PFFVSDNFPVMPFNP*KPMSRILQYLLSSY Trigger: GTAGGATGAAAGCAAATACTGTAAAATCCTACTCATAGGTTTGCAGGGATTAAATGGCATCACTGGAAAATTGTCTGACACAAAGAAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS TCA 90 bp | GGACCTAAACCAGCCTCTAAAGGAATTAAATTACTAACTGATCCTTaGAGCATAGCAGAAACTTTGGACAAGATTGTCAATCAACAAACA | + |
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Preference number: 5 (lower is better) Translates to: GPKPASKGIKLLTDP*SIAETLDKIVNQQT Trigger: TGTTTGTTGATTGACAATCTTGTCCAAAGTTTCTGCTATGCTTCAAGGATCAGTTAGTAATTTAATTCCTTTAGAGGCTGGTTTAGGTCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000634603.2 ENST00000658267.1 |
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| CDS CCA 72 bp | AAAGGCACACGGTGCAGGTCATCCTCATGGAGAGCCTaGGCAGAGGCCCTCTCACCCAGTCTAGGGATGTGG | + |
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Preference number: 6 (lower is better) Translates to: KGTRCRSSSWRA*AEALSPSLGMW Trigger: CCACATCCCTAGACTGGGTGAGAGGGCCTCTGCCCAGGCTCTCCATGAGGATGACCTGCACCGTGTGCCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS GCA 72 bp | CGGCGTCGCCTCCCCAGGCATCACCGAGCCTTTTCTTaGTACACTCGGCTCTGTGACTCTGCTTCAGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: RRRLPRHHRAFS*YTRLCDSASED Trigger: ATCCTCTGAAGCAGAGTCACAGAGCCGAGTGTAGCAAGAAAAGGCTCGGTGATGCCTGGGGAGGCGACGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS CCA 72 bp | ACAGGTTTGTCTGCAGTGACGCTGTCAAGGCTCCTTTaGATTCTTCTGACTGCCGGCGTCGCCTCCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: TGLSAVTLSRLL*ILLTAGVASPG Trigger: GCCTGGGGAGGCGACGCCGGCAGTCAGAAGAATCCAAAGGAGCCTTGACAGCGTCACTGCAGACAAACCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS CCA 72 bp | GGTTGCCTGCAAACCACCCGGAGCTGCAGAGAGGCGTaGAACAGTCTTCCTCACAGTCCTCGGAAGGAACCA | + |
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Preference number: 6 (lower is better) Translates to: GCLQTTRSCREA*NSLPHSPRKEP Trigger: TGGTTCCTTCCGAGGACTGTGAGGAAGACTGTTCCACGCCTCTCTGCAGCTCCGGGTGGTTTGCAGGCAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS CAA 72 bp | GACAGGTTTGTCTGCAGTGACGCTGTCAAGGCTCCTTaGGATTCTTCTGACTGCCGGCGTCGCCTCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: DRFVCSDAVKAP*DSSDCRRRLPR Trigger: CCTGGGGAGGCGACGCCGGCAGTCAGAAGAATCCAAAGGAGCCTTGACAGCGTCACTGCAGACAAACCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS CAA 72 bp | TCACAGTCCTCGGAAGGAACCAGCCCTGCCCACACCTaGATCTCAGACTTCCAGCATCGGCACGGTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: SQSSEGTSPAHT*ISDFQHRHGQG Trigger: ACCCTGACCGTGCCGATGCTGGAAGTCTGAGATCAAGGTGTGGGCAGGGCTGGTTCCTTCCGAGGACTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS CAA 90 bp | GTCAGTGGAGACAGGTTTGTCTGCAGTGACGCTGTCAAGGCTCCTTaGGATTCTTCTGACTGCCGGCGTCGCCTCCCCAGGCATCACCGA | + |
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Preference number: 6 (lower is better) Translates to: VSGDRFVCSDAVKAP*DSSDCRRRLPRHHR Trigger: TCGGTGATGCCTGGGGAGGCGACGCCGGCAGTCAGAAGAATCCAAAGGAGCCTTGACAGCGTCACTGCAGACAAACCTGTCTCCACTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS GCA 72 bp | GGCACCTGCTGTTCTAAGTGCATTAAAGGCACACGGTaGAGGTCATCCTCATGGAGAGCCTGGGCAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GTCCSKCIKGTR*RSSSWRAWAEA Trigger: GGCCTCTGCCCAGGCTCTCCATGAGGATGACCTGCACCGTGTGCCTTTAATGCACTTAGAACAGCAGGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS CAA 72 bp | CTCCTCTGGGTGAAGGGCCTGGGCTCCACACTTGACTaGTCATGTCTCATTGAGCGTTCGTGGCTGCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLWVKGLGSTLD*SCLIERSWLPS Trigger: TGAGGGCAGCCACGAACGCTCAATGAGACATGACAAGTCAAGTGTGGAGCCCAGGCCCTTCACCCAGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000437696.2 ENST00000653432.1 ENST00000667287.1 |
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| CDS CAA 72 bp | ACCGGAAGTGTGGGGGTGGAAGCATTGAAGGGTGAGTaGATGGGCAGCCATTGCTGTGAGCAGCCGAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TGSVGVEALKGE*MGSHCCEQPRC Trigger: ACACCTCGGCTGCTCACAGCAATGGCTGCCCATCAACTCACCCTTCAATGCTTCCACCCCCACACTTCCGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653432.1 |
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| CDS CAA 90 bp | CAGTCTTCCTCACAGTCCTCGGAAGGAACCAGCCCTGCCCACACCTaGATCTCAGACTTCCAGCATCGGCACGGTCAGGGTCTGTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: QSSSQSSEGTSPAHT*ISDFQHRHGQGLLF Trigger: AAACAACAGACCCTGACCGTGCCGATGCTGGAAGTCTGAGATCAAGGTGTGGGCAGGGCTGGTTCCTTCCGAGGACTGTGAGGAAGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS TCA 72 bp | CTGAGGGCTGCCCATGTGGAGCTGGGGTTTTGGTTCTaGTCCATTAAGCCCAGGGCTTTACTGGGTCCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LRAAHVELGFWF*SIKPRALLGPN Trigger: GTTGGGACCCAGTAAAGCCCTGGGCTTAATGGATCAGAACCAAAACCCCAGCTCCACATGGGCAGCCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS GCA 72 bp | ACAGTCTTCCTCACAGTCCTCGGAAGGAACCAGCCCTaGCCACACCTTGATCTCAGACTTCCAGCATCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TVFLTVLGRNQP*PHLDLRLPASA Trigger: TGCCGATGCTGGAAGTCTGAGATCAAGGTGTGGGCAGGGCTGGTTCCTTCCGAGGACTGTGAGGAAGACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS GCA 72 bp | CAGCAATGGAAAGGTTGCCTGCAAACCACCCGGAGCTaGAGAGAGGCGTGGAACAGTCTTCCTCACAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QQWKGCLQTTRS*REAWNSLPHSP Trigger: AGGACTGTGAGGAAGACTGTTCCACGCCTCTCTGCAGCTCCGGGTGGTTTGCAGGCAACCTTTCCATTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS CCA 72 bp | AAGTGCATTAAAGGCACACGGTGCAGGTCATCCTCATaGAGAGCCTGGGCAGAGGCCCTCTCACCCAGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: KCIKGTRCRSSS*RAWAEALSPSL Trigger: TAGACTGGGTGAGAGGGCCTCTGCCCAGGCTCTCCATGAGGATGACCTGCACCGTGTGCCTTTAATGCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS GCA 72 bp | CCCTTTCAAGGAACCCCTGGAAGGGTCCGGACACAATaGCGGCTCATGGTTGTTTTCCATTCCTGCTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: PFQGTPGRVRTQ*RLMVVFHSCSD Trigger: GTCAGAGCAGGAATGGAAAACAACCATGAGCCGGCATTGTGTCCGGACCCTTCCAGGGGTTCCTTGAAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000437696.2 ENST00000667287.1 |
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| CDS GCA 72 bp | AGATTCTGTCTCCCTTTTGCTGACTCTCCAGACAGCTaGAGAGGCTTGCACCTCCTACCTCCCTCCTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RFCLPFADSPDS*RGLHLLPPSSP Trigger: AGGAGAGGAGGGAGGTAGGAGGTGCAAGCCTCTGCAGCTGTCTGGAGAGTCAGCAAAAGGGAGACAGAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS CAA 72 bp | AGGGCCTGGGCTCCACACTTGACTTGTCATGTCTCATaGAGCGTTCGTGGCTGCCCTCATCCTCTTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RAWAPHLTCHVS*SVRGCPHPLPS Trigger: TGAAGGAAGAGGATGAGGGCAGCCACGAACGCTCAATGAGACATGACAAGTCAAGTGTGGAGCCCAGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000437696.2 ENST00000653432.1 ENST00000667287.1 |
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| CDS TCA 72 bp | GGAGAGAGCCATGTGAACATGAGGGCAGAGACTGGGTaGTGTGTCTGCAAAGCCAGCAATGGAAAGGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GESHVNMRAETG*CVCKASNGKVA Trigger: GGCAACCTTTCCATTGCTGGCTTTGCAGACACATCACCCAGTCTCTGCCCTCATGTTCACATGGCTCTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS GCA 72 bp | TATCCAGTGAGATATGGGTTTAGAAGCATCCCCTGCTaGTGGTCCTGTGCTCCTCCCTGGCTGGGTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: YPVRYGFRSIPC*WSCAPPWLGFS Trigger: TGAGAAACCCAGCCAGGGAGGAGCACAGGACCAGCAGCAGGGGATGCTTCTAAACCCATATCTCACTGGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS CAA 72 bp | GTTAGCCATGTGGGCAATGGGTCTAGACAGCCAGGTTaGAATCCCTCCTCACCTTTTGAGCCCTCTGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VSHVGNGSRQPG*NPSSPFEPSVP Trigger: AGGCACAGAGGGCTCAAAAGGTGAGGAGGGATTCAAACCTGGCTGTCTAGACCCATTGCCCACATGGCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437696.2 ENST00000667287.1 |
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| CDS CAA 90 bp | TATGGGGTGGTTAGCCATGTGGGCAATGGGTCTAGACAGCCAGGTTaGAATCCCTCCTCACCTTTTGAGCCCTCTGTGCCTTGGTTTACC | + |
|
Preference number: 6 (lower is better) Translates to: YGVVSHVGNGSRQPG*NPSSPFEPSVPWFT Trigger: GGTAAACCAAGGCACAGAGGGCTCAAAAGGTGAGGAGGGATTCAAACCTGGCTGTCTAGACCCATTGCCCACATGGCTAACCACCCCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000437696.2 ENST00000667287.1 |
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| CDS TCA 72 bp | CTGATGTCTGTCCGGTCTGCACACATCTCTCCATTGTaGAGGGCATTCAAGTTTGCCCTCTCTCACCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LMSVRSAHISPL*RAFKFALSHPG Trigger: ACCAGGGTGAGAGAGGGCAAACTTGAATGCCCTTCACAATGGAGAGATGTGTGCAGACCGGACAGACATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000437696.2 ENST00000441568.2 ENST00000634603.2 ENST00000653432.1 ENST00000658267.1 ENST00000667287.1 |
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| CDS TCA 72 bp | TTAGCCATGTGGGCAATGGGTCTAGACAGCCAGGTTTaGATCCCTCCTCACCTTTTGAGCCCTCTGTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LAMWAMGLDSQV*IPPHLLSPLCL Trigger: AAGGCACAGAGGGCTCAAAAGGTGAGGAGGGATTCAAACCTGGCTGTCTAGACCCATTGCCCACATGGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437696.2 ENST00000667287.1 |
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| CDS CCA 72 bp | ACAGGGAGAGAGCCATGTGAACATGAGGGCAGAGACTaGGTGATGTGTCTGCAAAGCCAGCAATGGAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TGREPCEHEGRD*VMCLQSQQWKG Trigger: ACCTTTCCATTGCTGGCTTTGCAGACACATCACCCAGTCTCTGCCCTCATGTTCACATGGCTCTCTCCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS CAA 90 bp | ACTTGTCTCCTGTTCGGGGGAGCTCATCTGCTCATGTCTGCCTCTTaGTCTGGGTTTTATCTCTCCACATGCAGGCCTGAGACAAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: TCLLFGGAHLLMSAS*SGFYLSTCRPETRI Trigger: AATCCTTGTCTCAGGCCTGCATGTGGAGAGATAAAACCCAGACAAAGAGGCAGACATGAGCAGATGAGCTCCCCCGAACAGGAGACAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000441568.2 ENST00000634603.2 ENST00000653432.1 ENST00000667287.1 |
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| CDS GCA 72 bp | TGCACACATCTCTCCATTGTGAAGGGCATTCAAGTTTaGCCTCTCTCACCCTGGTCCTCAGAAGCTAATGGG | + |
|
Preference number: 6 (lower is better) Translates to: CTHLSIVKGIQV*PLSPWSSEANG Trigger: CCCATTAGCTTCTGAGGACCAGGGTGAGAGAGGGCAAACTTGAATGCCCTTCACAATGGAGAGATGTGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000437696.2 ENST00000441568.2 ENST00000634603.2 ENST00000653432.1 ENST00000658267.1 ENST00000667287.1 |
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| CDS GCA 72 bp | TTGTCTCCTGTTCGGGGGAGCTCATCTGCTCATGTCTaGCTCTTTGTCTGGGTTTTATCTCTCCACATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSPVRGSSSAHV*LFVWVLSLHMQ Trigger: CTGCATGTGGAGAGATAAAACCCAGACAAAGAGGCAGACATGAGCAGATGAGCTCCCCCGAACAGGAGACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000437696.2 ENST00000441568.2 ENST00000634603.2 ENST00000653432.1 ENST00000658267.1 ENST00000667287.1 |
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| CDS GCA 72 bp | AGTCTGAGTAGGGCAGTCAGTGGAGACAGGTTTGTCTaGAGTGACGCTGTCAAGGCTCCTTTGGATTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLSRAVSGDRFV*SDAVKAPLDSS Trigger: AGAAGAATCCAAAGGAGCCTTGACAGCGTCACTGCAGACAAACCTGTCTCCACTGACTGCCCTACTCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS GCA 72 bp | GCTCCCTGGCTGTTCCTGCACACTAGCCACTTACATTaGAGCTACCTGTGCACTGATAAAGGAACTGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: APWLFLHTSHLH*SYLCTDKGTDV Trigger: GACATCAGTTCCTTTATCAGTGCACAGGTAGCTGCAATGTAAGTGGCTAGTGTGCAGGAACAGCCAGGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653432.1 |
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| CDS GCA 72 bp | GCCAAAGTGTTTATCCTTCAGCTCCCTGGCTGTTCCTaGACACTAGCCACTTACATTGCAGCTACCTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AKVFILQLPGCS*TLATYIAATCA Trigger: TGCACAGGTAGCTGCAATGTAAGTGGCTAGTGTGCAGGAACAGCCAGGGAGCTGAAGGATAAACACTTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653432.1 |
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| CDS CAA 72 bp | TGGGGTGAATTCACTTCCCCTCCAACGTGCAGCTCATaGGTGGTAGAGCTACGATTTGAACGTGGCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WGEFTSPPTCSS*VVELRFERGFR Trigger: TCTGAAGCCACGTTCAAATCGTAGCTCTACCACCAATGAGCTGCACGTTGGAGGGGAAGTGAATTCACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS GCA 72 bp | GAGAGAGGATTCCAGGAAGCATATTGCAGCTACCTGTaGACTGATAAAGGAACTGATGTCTGTCCGGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ERGFQEAYCSYL*TDKGTDVCPVC Trigger: GCAGACCGGACAGACATCAGTTCCTTTATCAGTGCACAGGTAGCTGCAATATGCTTCCTGGAATCCTCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441568.2 ENST00000634603.2 ENST00000667287.1 |
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| CDS GCA 72 bp | TTCCTGCACACTAGCCACTTACATTGCAGCTACCTGTaGACTGATAAAGGAACTGATGTCTGTCCGGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FLHTSHLHCSYL*TDKGTDVCPVC Trigger: GCAGACCGGACAGACATCAGTTCCTTTATCAGTGCACAGGTAGCTGCAATGTAAGTGGCTAGTGTGCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653432.1 |
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| CDS CCA 72 bp | ACAGAAACAGAAGCCACATGTGGGAGGAAATATCGATaGTCAACACTGACAGGGAAGAGGGGTCTACGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TETEATCGRKYR*STLTGKRGLRF Trigger: GAACCGTAGACCCCTCTTCCCTGTCAGTGTTGACCATCGATATTTCCTCCCACATGTGGCTTCTGTTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS CAA 90 bp | TCCACATGCAGGCCTGAGACAAGGATTTGGAGGCAAGCAGTTTATTaGAGAGAGGATTCCAGGAAGCATATTGCAGCTACCTGTGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: STCRPETRIWRQAVY*REDSRKHIAATCAL Trigger: CAGTGCACAGGTAGCTGCAATATGCTTCCTGGAATCCTCTCTCAAATAAACTGCTTGCCTCCAAATCCTTGTCTCAGGCCTGCATGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441568.2 ENST00000634603.2 ENST00000667287.1 |
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| CDS CAA 90 bp | GCGTATTGTCACACATGTGAAGTAACTAAAGATTCTGTCTCCCTTTaGCTGACTCTCCAGACAGCTGCAGAGGCTTGCACCTCCTACCTC | + |
|
Preference number: 6 (lower is better) Translates to: AYCHTCEVTKDSVSL*LTLQTAAEACTSYL Trigger: GAGGTAGGAGGTGCAAGCCTCTGCAGCTGTCTGGAGAGTCAGCAAAAGGGAGACAGAATCTTTAGTTACTTCACATGTGTGACAATACGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS TCA 72 bp | TTCTTCAGAGGCTTGGAAGGTGATGAGCTTATCCAGTaGGATATGGGTTTAGAAGCATCCCCTGCTGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: FFRGLEGDELIQ*DMGLEASPAAG Trigger: ACCAGCAGCAGGGGATGCTTCTAAACCCATATCTCACTGGATAAGCTCATCACCTTCCAAGCCTCTGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS CCA 72 bp | AATGACAACGATCATTTTTCCTTGCAGGTTATGGGGTaGTTAGCCATGTGGGCAATGGGTCTAGACAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: NDNDHFSLQVMG*LAMWAMGLDSQ Trigger: CTGGCTGTCTAGACCCATTGCCCACATGGCTAACCACCCCATAACCTGCAAGGAAAAATGATCGTTGTCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437696.2 ENST00000667287.1 |
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| CDS CAA 72 bp | CATTCTGTCCAGGGAGTACTCACACAAGGGCGCAGTTaGATCCACCTTGTCCTGAAAGCTTTTATGCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: HSVQGVLTQGRS*IHLVLKAFMPD Trigger: ATCTGGCATAAAAGCTTTCAGGACAAGGTGGATCAAACTGCGCCCTTGTGTGAGTACTCCCTGGACAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS TCA 72 bp | GGCCTGAGACAAGGATTTGGAGGCAAGCAGTTTATTTaGGAGAGGATTCCAGGAAGCATATTGCAGCTACCT | + |
|
Preference number: 6 (lower is better) Translates to: GLRQGFGGKQFI*ERIPGSILQLP Trigger: AGGTAGCTGCAATATGCTTCCTGGAATCCTCTCTCAAATAAACTGCTTGCCTCCAAATCCTTGTCTCAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441568.2 ENST00000634603.2 ENST00000667287.1 |
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| CDS TCA 72 bp | CAGGAAGTGAATGCAATAATGATCGCAGAATGGCAGTaGGCGTTTACTGAGGCACCTGCTGTTCTAAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QEVNAIMIAEWQ*AFTEAPAVLSA Trigger: TGCACTTAGAACAGCAGGTGCCTCAGTAAACGCTCACTGCCATTCTGCGATCATTATTGCATTCACTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
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| CDS TCA 72 bp | GGCCTGAGACAAGGATTTGGAGGCAAGCAGTTTATTTaGGAGAGGATTCCAGGAAGCATCTGTAAGAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GLRQGFGGKQFI*ERIPGSICKRV Trigger: CACTCTCTTACAGATGCTTCCTGGAATCCTCTCTCAAATAAACTGCTTGCCTCCAAATCCTTGTCTCAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653432.1 |
||
| CDS GCA 72 bp | ATGTCTGCCTCTTTGTCTGGGTTTTATCTCTCCACATaGAGGCATTGCAGCTACCTGTGCACTGATAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: MSASLSGFYLST*RHCSYLCTDKG Trigger: TCCTTTATCAGTGCACAGGTAGCTGCAATGCCTGCATGTGGAGAGATAAAACCCAGACAAAGAGGCAGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437696.2 ENST00000658267.1 |
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| CDS CCA 72 bp | ATTGTGAAGGGCATTCAAGTTTGCCCTCTCTCACCCTaGTCCTCAGAAGCTAATGGGTCACTTTCCCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: IVKGIQVCPLSP*SSEANGSLSQI Trigger: AATTTGGGAAAGTGACCCATTAGCTTCTGAGGACCAGGGTGAGAGAGGGCAAACTTGAATGCCCTTCACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000437696.2 ENST00000441568.2 ENST00000634603.2 ENST00000653432.1 ENST00000658267.1 ENST00000667287.1 |
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| CDS CAA 72 bp | AGGCCTGAGACAAGGATTTGGAGGCAAGCAGTTTATTaGAGAGAGGATTCCAGGAAGCATATTGCAGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: RPETRIWRQAVY*REDSRKHIAAT Trigger: GGTAGCTGCAATATGCTTCCTGGAATCCTCTCTCAAATAAACTGCTTGCCTCCAAATCCTTGTCTCAGGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441568.2 ENST00000634603.2 ENST00000667287.1 |
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| CDS CAA 90 bp | ATAACCAGACATTCTGTCCAGGGAGTACTCACACAAGGGCGCAGTTaGATCCACCTTGTCCTGAAAGCTTTTATGCCAGATTTAGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ITRHSVQGVLTQGRS*IHLVLKAFMPDLGE Trigger: TTCACCTAAATCTGGCATAAAAGCTTTCAGGACAAGGTGGATCAAACTGCGCCCTTGTGTGAGTACTCCCTGGACAGAATGTCTGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441568.2 |
||
| CDS TCA 72 bp | CTCTTTGTCTGGGTTTTATCTCTCCACATGCAGGCCTaGGACAAGGATTTGGAGGCAAGCAGTTTATTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LFVWVLSLHMQA*DKDLEASSLFE Trigger: CTCAAATAAACTGCTTGCCTCCAAATCCTTGTCTCAGGCCTGCATGTGGAGAGATAAAACCCAGACAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000441568.2 ENST00000634603.2 ENST00000653432.1 ENST00000667287.1 |
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| CDS TCA 72 bp | TGCAATAATGATCGCAGAATGGCAGTGAGCGTTTACTaGGGCACCTGCTGTTCTAAGTGCATTAAAGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: CNNDRRMAVSVY*GTCCSKCIKGT Trigger: TGTGCCTTTAATGCACTTAGAACAGCAGGTGCCTCAGTAAACGCTCACTGCCATTCTGCGATCATTATTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441568.2 |
||
| CDS CCA 72 bp | TTTTATCTCTCCACATGCAGGCCTGAGACAAGGATTTaGAGGCAAGCAGTTTATTTGAGAGAGGATTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FYLSTCRPETRI*RQAVYLREDSR Trigger: CCTGGAATCCTCTCTCAAATAAACTGCTTGCCTCCAAATCCTTGTCTCAGGCCTGCATGTGGAGAGATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000441568.2 ENST00000634603.2 ENST00000653432.1 ENST00000667287.1 |
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| CDS CAA 72 bp | TCAATAGAGACAGGGATTCTGGAGTTAGAGGATATCTaGAGAGGGCATCATCACTGCTGTCTTTCTGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SIETGILELEDI*RGHHHCCLSEE Trigger: CTCCTCAGAAAGACAGCAGTGATGATGCCCTCTCAAGATATCCTCTAACTCCAGAATCCCTGTCTCTATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000437696.2 ENST00000653432.1 ENST00000667287.1 |
||
| CDS GCA 72 bp | AGCAGTTTATTTGAGAGAGGATTCCAGGAAGCATATTaGAGCTACCTGTGCACTGATAAAGGAACTGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSLFERGFQEAY*SYLCTDKGTDV Trigger: GACATCAGTTCCTTTATCAGTGCACAGGTAGCTGCAATATGCTTCCTGGAATCCTCTCTCAAATAAACTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441568.2 ENST00000634603.2 ENST00000667287.1 |
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| CDS GCA 72 bp | TCCTATGTTGATGTCCTAGCCCCTAGTACTTCAGAATaGTACCTTATGTGGCAATGGGTTATTTGCAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: SYVDVLAPSTSE*YLMWQWVICRC Trigger: ACATCTGCAAATAACCCATTGCCACATAAGGTAGCATTCTGAAGTACTAGGGGCTAGGACATCAACATAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441568.2 |
||
| CDS CCA 72 bp | AGATTCGATGTTGCAGGTTTGTTTTTAGCTGGTGCTTaGGGACCTAAACCAGCCTCTAAAGGAATTAAATTA | + |
|
Preference number: 6 (lower is better) Translates to: RFDVAGLFLAGA*GPKPASKGIKL Trigger: TAATTTAATTCCTTTAGAGGCTGGTTTAGGTCCCCAAGCACCAGCTAAAAACAAACCTGCAACATCGAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000634603.2 ENST00000658267.1 |
||
| CDS GCA 72 bp | GTGTCAGACAATTTTCCAGTGATGCCATTTAATCCCTaGAAACCTATGAGTAGGATTTTACAGTATTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VSDNFPVMPFNP*KPMSRILQYLL Trigger: AAGCAAATACTGTAAAATCCTACTCATAGGTTTGCAGGGATTAAATGGCATCACTGGAAAATTGTCTGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441568.2 |
||
| CDS TCA 72 bp | ACTTTCAGAGAAACTTTACTTCCCAATTTTGTCAGCTaGGTTTCAATTTCTAATCATCCCCACCTCAATTCA | + |
|
Preference number: 6 (lower is better) Translates to: TFRETLLPNFVS*VSISNHPHLNS Trigger: TGAATTGAGGTGGGGATGATTAGAAATTGAAACTCAGCTGACAAAATTGGGAAGTAAAGTTTCTCTGAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000634603.2 ENST00000658267.1 |
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