Pregenerated sensors for LINC01746 (Homo sapiens)
Ensembl gene IDs: ENSG00000274469Ensembl transcript IDs: ENST00000621390.1, ENST00000653260.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GATCTGCTTCCAGGGACCCCGACCTGCCCTCCCAGTCACCATAGCTaGGAGCCCCCACCTCTGCCATTCCATGCATCCCTGGCCCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: DLLPGTPTCPPSHHS*EPPPLPFHASLAQR Trigger: CCTCTGGGCCAGGGATGCATGGAATGGCAGAGGTGGGGGCTCCCAGCTATGGTGACTGGGAGGGCAGGTCGGGGTCCCTGGAAGCAGATC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000621390.1 |
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| CDS TCA 90 bp | TTCCCACTCGCAGCAGCCATCACTGGGACAGCGTTAAGGTGCTGCTaGCAGGTGCTGCCGCAGGCACCGCTATTGCCAGGGAGGCCTGAC | + |
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Preference number: 5 (lower is better) Translates to: FPLAAAITGTALRCC*QVLPQAPLLPGRPD Trigger: GTCAGGCCTCCCTGGCAATAGCGGTGCCTGCGGCAGCACCTGTCAGCAGCACCTTAACGCTGTCCCAGTGATGGCTGCTGCGAGTGGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS GCA 90 bp | TTGTCTCAGGATCTGCTTCCAGGGACCCCGACCTCTGCCATTCCATaGATCCCTGGCCCAGAGGAGGCAAAACAGCCCTCTGCTTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: LSQDLLPGTPTSAIP*IPGPEEAKQPSASL Trigger: GAGGGAAGCAGAGGGCTGTTTTGCCTCCTCTGGGCCAGGGATGCATGGAATGGCAGAGGTCGGGGTCCCTGGAAGCAGATCCTGAGACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS CCA 90 bp | CAGGGCGGCATGGCATCACACGCTGTCTTAGGAAAACAGCTGGAGTaGAGGCGTGTGGGTGGCATCAGCCAGAGTCAAGACCAGCGAGGA | + |
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Preference number: 5 (lower is better) Translates to: QGGMASHAVLGKQLE*RRVGGISQSQDQRG Trigger: TCCTCGCTGGTCTTGACTCTGGCTGATGCCACCCACACGCCTCCACTCCAGCTGTTTTCCTAAGACAGCGTGTGATGCCATGCCGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS GCA 90 bp | TCAAGGAGCAGTGCAGCAAAGAGCCTCCCAGACCCCAAGAACAACTaGCTCCTGTCACCTTCCCACTCGCAGCAGCCATCACTGGGACAG | + |
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Preference number: 5 (lower is better) Translates to: SRSSAAKSLPDPKNN*LLSPSHSQQPSLGQ Trigger: CTGTCCCAGTGATGGCTGCTGCGAGTGGGAAGGTGACAGGAGGCAGTTGTTCTTGGGGTCTGGGAGGCTCTTTGCTGCACTGCTCCTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS GCA 90 bp | TGCCATTCCATGCATCCCTGGCCCAGAGGAGGCAAAACAGCCCTCTaGTTCCCTCCTCCAGAAGCAGGAAAACTTCACATCAGGATCCCG | + |
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Preference number: 5 (lower is better) Translates to: CHSMHPWPRGGKTAL*FPPPEAGKLHIRIP Trigger: CGGGATCCTGATGTGAAGTTTTCCTGCTTCTGGAGGAGGGAAGCAGAGGGCTGTTTTGCCTCCTCTGGGCCAGGGATGCATGGAATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000621390.1 ENST00000653260.1 |
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| CDS CCA 90 bp | GTGACGTGGGGAGGAGGTCTGCAATTCCAGAAGATGTACAGGAACTaGGGCTCACCCTTCCATGTAGAGGGGTCAAGGAGCAGTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: VTWGGGLQFQKMYRN*GSPFHVEGSRSSAA Trigger: TGCTGCACTGCTCCTTGACCCCTCTACATGGAAGGGTGAGCCCCAGTTCCTGTACATCTTCTGGAATTGCAGACCTCCTCCCCACGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS GCA 90 bp | GAGGTCTTGGGGACTTGCATCCTCCGATATCCTTACACAATGGAATaGTCCCAGTGGGATCATGATGGGGCTCAGACAGGCACTGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: EVLGTCILRYPYTME*SQWDHDGAQTGTGP Trigger: GGGACCAGTGCCTGTCTGAGCCCCATCATGATCCCACTGGGAGCATTCCATTGTGTAAGGATATCGGAGGATGCAAGTCCCCAAGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621390.1 |
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| CDS TCA 90 bp | GAAGGCCAAGGCCCACCCTGGGCCACCAAGAGCTGGGCACACCTTTaGAATAAATCTCTTGCACAGGGGACTTTGTCTCAGGATCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: EGQGPPWATKSWAHL*NKSLAQGTLSQDLL Trigger: AAGCAGATCCTGAGACAAAGTCCCCTGTGCAAGAGATTTATTTCAAAGGTGTGCCCAGCTCTTGGTGGCCCAGGGTGGGCCTTGGCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000621390.1 ENST00000653260.1 |
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| CDS GCA 90 bp | ACCTTTGAAATAAATCTCTTGCACAGGGGACTTTGTCTCAGGATCTaGTTCCAGGGACCCCGACCTGCCCTCCCAGTCACCATAGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: TFEINLLHRGLCLRI*FQGPRPALPVTIAG Trigger: CCCAGCTATGGTGACTGGGAGGGCAGGTCGGGGTCCCTGGAAGCAGATCCTGAGACAAAGTCCCCTGTGCAAGAGATTTATTTCAAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621390.1 |
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| CDS CCA 90 bp | GGGACTTGCATCCTCCGATATCCTTACACAATGGAATGCTCCCAGTaGGATCATGATGGGGCTCAGACAGGCACTGGTCCCCACTATGGA | + |
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Preference number: 5 (lower is better) Translates to: GTCILRYPYTMECSQ*DHDGAQTGTGPHYG Trigger: TCCATAGTGGGGACCAGTGCCTGTCTGAGCCCCATCATGATCCCACTGGGAGCATTCCATTGTGTAAGGATATCGGAGGATGCAAGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621390.1 |
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| CDS GCA 90 bp | ACCTTTGAAATAAATCTCTTGCACAGGGGACTTTGTCTCAGGATCTaGTTCCAGGGACCCCGACCTCTGCCATTCCATGCATCCCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: TFEINLLHRGLCLRI*FQGPRPLPFHASLA Trigger: GGCCAGGGATGCATGGAATGGCAGAGGTCGGGGTCCCTGGAAGCAGATCCTGAGACAAAGTCCCCTGTGCAAGAGATTTATTTCAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS CCA 90 bp | TCGGGGAGGTCTTGGGGACTTGCATCCTCCGATATCCTTACACAATaGAATGATCTGGTAGTCACAGGTACCAACAAGGCACTTCATGGG | + |
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Preference number: 5 (lower is better) Translates to: SGRSWGLASSDILTQ*NDLVVTGTNKALHG Trigger: CCCATGAAGTGCCTTGTTGGTACCTGTGACTACCAGATCATTCCATTGTGTAAGGATATCGGAGGATGCAAGTCCCCAAGACCTCCCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS TCA 90 bp | GAGGTCTTGGGGACTTGCATCCTCCGATATCCTTACACAATGGAATaGTCTGGTAGTCACAGGTACCAACAAGGCACTTCATGGGTTACA | + |
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Preference number: 5 (lower is better) Translates to: EVLGTCILRYPYTME*SGSHRYQQGTSWVT Trigger: TGTAACCCATGAAGTGCCTTGTTGGTACCTGTGACTACCAGATCATTCCATTGTGTAAGGATATCGGAGGATGCAAGTCCCCAAGACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS GCA 90 bp | AAGCAGGAAAACTTCACATCAGGATCCCGATGTCATCTTGAGATCTaGACAGCCCTCTTCTCACTTGAACAATTGTCCTCAAAGCCACAA | + |
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Preference number: 5 (lower is better) Translates to: KQENFTSGSRCHLEI*TALFSLEQLSSKPQ Trigger: TTGTGGCTTTGAGGACAATTGTTCAAGTGAGAAGAGGGCTGTGCAGATCTCAAGATGACATCGGGATCCTGATGTGAAGTTTTCCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000621390.1 ENST00000653260.1 |
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| CDS TCA 90 bp | GGCACTTCATGGGTTACAAAGCAGGTTCCCATGGAATGTCTTTGCTaGTCTCCAGTCAGTTTCACAGATGGAGAAAGAGAAACTCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: GTSWVTKQVPMECLC*SPVSFTDGERETQK Trigger: CTTTTGAGTTTCTCTTTCTCCATCTGTGAAACTGACTGGAGATCAGCAAAGACATTCCATGGGAACCTGCTTTGTAACCCATGAAGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS TCA 90 bp | TCCAGACAGGCATCTGGGAGTGGAATTGCTGAATATTCACCTCCATaGGATACTGCCAAATTGTTTTCCAATGTGGTTGCATCAATTTGC | + |
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Preference number: 5 (lower is better) Translates to: SRQASGSGIAEYSPP*DTAKLFSNVVASIC Trigger: GCAAATTGATGCAACCACATTGGAAAACAATTTGGCAGTATCTCATGGAGGTGAATATTCAGCAATTCCACTCCCAGATGCCTGTCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS GCA 72 bp | GGTGCTGCTGACAGGTGCTGCCGCAGGCACCGCTATTaGCAGGGAGGCCTGACAGCCGCTCCAGCTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GAADRCCRRHRY*QGGLTAAPAVS Trigger: GGAGACAGCTGGAGCGGCTGTCAGGCCTCCCTGGCAATAGCGGTGCCTGCGGCAGCACCTGTCAGCAGCACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS TCA 72 bp | GGCTCAGACAGGCACTGGTCCCCACTATGGAAGGAGTaGGGGTCCTGGGTCAGCAGGCTGAAGGCCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: GSDRHWSPLWKE*GSWVSRLKAKA Trigger: GGCCTTGGCCTTCAGCCTGCTGACCCAGGACCCTCACTCCTTCCATAGTGGGGACCAGTGCCTGTCTGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000621390.1 ENST00000653260.1 |
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| CDS TCA 72 bp | GCAGCAGCCATCACTGGGACAGCGTTAAGGTGCTGCTaGCAGGTGCTGCCGCAGGCACCGCTATTGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: AAAITGTALRCC*QVLPQAPLLPG Trigger: CCCTGGCAATAGCGGTGCCTGCGGCAGCACCTGTCAGCAGCACCTTAACGCTGTCCCAGTGATGGCTGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS GCA 72 bp | TTTGTCTCAGGATCTGCTTCCAGGGACCCCGACCTCTaGCATTCCATGCATCCCTGGCCCAGAGGAGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: FVSGSASRDPDL*HSMHPWPRGGK Trigger: TTTGCCTCCTCTGGGCCAGGGATGCATGGAATGGCAGAGGTCGGGGTCCCTGGAAGCAGATCCTGAGACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS GCA 72 bp | AGTGCAGCAAAGAGCCTCCCAGACCCCAAGAACAACTaGCTCCTGTCACCTTCCCACTCGCAGCAGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: SAAKSLPDPKNN*LLSPSHSQQPS Trigger: TGATGGCTGCTGCGAGTGGGAAGGTGACAGGAGGCAGTTGTTCTTGGGGTCTGGGAGGCTCTTTGCTGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS GCA 72 bp | GGGCTCACCCTTCCATGTAGAGGGGTCAAGGAGCAGTaGAGCAAAGAGCCTCCCAGACCCCAAGAACAACTG | + |
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Preference number: 6 (lower is better) Translates to: GLTLPCRGVKEQ*SKEPPRPQEQL Trigger: CAGTTGTTCTTGGGGTCTGGGAGGCTCTTTGCTGCACTGCTCCTTGACCCCTCTACATGGAAGGGTGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS GCA 72 bp | ATAAATCTCTTGCACAGGGGACTTTGTCTCAGGATCTaGTTCCAGGGACCCCGACCTGCCCTCCCAGTCACC | + |
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Preference number: 6 (lower is better) Translates to: INLLHRGLCLRI*FQGPRPALPVT Trigger: GGTGACTGGGAGGGCAGGTCGGGGTCCCTGGAAGCAGATCCTGAGACAAAGTCCCCTGTGCAAGAGATTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621390.1 |
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| CDS TCA 72 bp | GGCCCACCCTGGGCCACCAAGAGCTGGGCACACCTTTaGAATAAATCTCTTGCACAGGGGACTTTGTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: GPPWATKSWAHL*NKSLAQGTLSQ Trigger: CTGAGACAAAGTCCCCTGTGCAAGAGATTTATTTCAAAGGTGTGCCCAGCTCTTGGTGGCCCAGGGTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000621390.1 ENST00000653260.1 |
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| CDS GCA 72 bp | CACTCCACCAGCAGTGTCGGGGAGGTCTTGGGGACTTaGATCCTCCGATATCCTTACACAATGGAATGCTCC | + |
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Preference number: 6 (lower is better) Translates to: HSTSSVGEVLGT*ILRYPYTMECS Trigger: GGAGCATTCCATTGTGTAAGGATATCGGAGGATGCAAGTCCCCAAGACCTCCCCGACACTGCTGGTGGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621390.1 |
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| CDS CCA 72 bp | GGAGGAGGTCTGCAATTCCAGAAGATGTACAGGAACTaGGGCTCACCCTTCCATGTAGAGGGGTCAAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GGGLQFQKMYRN*GSPFHVEGSRS Trigger: GCTCCTTGACCCCTCTACATGGAAGGGTGAGCCCCAGTTCCTGTACATCTTCTGGAATTGCAGACCTCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS CCA 72 bp | ATCCTCCGATATCCTTACACAATGGAATGCTCCCAGTaGGATCATGATGGGGCTCAGACAGGCACTGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: ILRYPYTMECSQ*DHDGAQTGTGP Trigger: GGGACCAGTGCCTGTCTGAGCCCCATCATGATCCCACTGGGAGCATTCCATTGTGTAAGGATATCGGAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621390.1 |
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| CDS CCA 72 bp | AGTCAAGACCAGCGAGGAAATCCACTGGAGGTGACGTaGGGAGGAGGTCTGCAATTCCAGAAGATGTACAGG | + |
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Preference number: 6 (lower is better) Translates to: SQDQRGNPLEVT*GGGLQFQKMYR Trigger: CCTGTACATCTTCTGGAATTGCAGACCTCCTCCCCACGTCACCTCCAGTGGATTTCCTCGCTGGTCTTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS TCA 72 bp | ATATCCTTACACAATGGAATGCTCCCAGTGGGATCATaGTGGGGCTCAGACAGGCACTGGTCCCCACTATGG | + |
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Preference number: 6 (lower is better) Translates to: ISLHNGMLPVGS*WGSDRHWSPLW Trigger: CCATAGTGGGGACCAGTGCCTGTCTGAGCCCCATCATGATCCCACTGGGAGCATTCCATTGTGTAAGGATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621390.1 |
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| CDS TCA 72 bp | CTAACCAGTTATAACAAGTACCTCCCAGTGGGATCATaGTGGGGCTCAGACAGGCACTGGTCCCCACTATGG | + |
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Preference number: 6 (lower is better) Translates to: LTSYNKYLPVGS*WGSDRHWSPLW Trigger: CCATAGTGGGGACCAGTGCCTGTCTGAGCCCCATCATGATCCCACTGGGAGGTACTTGTTATAACTGGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS GCA 72 bp | ATAAATCTCTTGCACAGGGGACTTTGTCTCAGGATCTaGTTCCAGGGACCCCGACCTCTGCCATTCCATGCA | + |
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Preference number: 6 (lower is better) Translates to: INLLHRGLCLRI*FQGPRPLPFHA Trigger: TGCATGGAATGGCAGAGGTCGGGGTCCCTGGAAGCAGATCCTGAGACAAAGTCCCCTGTGCAAGAGATTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS CAA 90 bp | CTCCAGCTGTCTCCCATCAGAGAGAACACACATCTGAGACCAGACTaGATGAGGTTGTCTCCAGACAGGCATCTGGGAGTGGAATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LQLSPIRENTHLRPD*MRLSPDRHLGVELL Trigger: CAGCAATTCCACTCCCAGATGCCTGTCTGGAGACAACCTCATCAAGTCTGGTCTCAGATGTGTGTTCTCTCTGATGGGAGACAGCTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS CCA 72 bp | TCTTGGGGACTTGCATCCTCCGATATCCTTACACAATaGAATGCTCCCAGTGGGATCATGATGGGGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SWGLASSDILTQ*NAPSGIMMGLR Trigger: TCTGAGCCCCATCATGATCCCACTGGGAGCATTCCATTGTGTAAGGATATCGGAGGATGCAAGTCCCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621390.1 |
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| CDS CAA 72 bp | TACTGCCAAATTGTTTTCCAATGTGGTTGCATCAATTaGCACTCCACCAGCAGTGTCGGGGAGGTCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: YCQIVFQCGCIN*HSTSSVGEVLG Trigger: CCCCAAGACCTCCCCGACACTGCTGGTGGAGTGCAAATTGATGCAACCACATTGGAAAACAATTTGGCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS CAA 72 bp | AGAGAGAACACACATCTGAGACCAGACTTGATGAGGTaGTCTCCAGACAGGCATCTGGGAGTGGAATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RENTHLRPDLMR*SPDRHLGVELL Trigger: CAGCAATTCCACTCCCAGATGCCTGTCTGGAGACAACCTCATCAAGTCTGGTCTCAGATGTGTGTTCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS CAA 90 bp | TCTCCCATCAGAGAGAACACACATCTGAGACCAGACTTGATGAGGTaGTCTCCAGACAGGCATCTGGGAGTGGAATTGCTGAATATTCAC | + |
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Preference number: 6 (lower is better) Translates to: SPIRENTHLRPDLMR*SPDRHLGVELLNIH Trigger: GTGAATATTCAGCAATTCCACTCCCAGATGCCTGTCTGGAGACAACCTCATCAAGTCTGGTCTCAGATGTGTGTTCTCTCTGATGGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS CAA 90 bp | TCCTCCAGAAGCAGGAAAACTTCACATCAGGATCCCGATGTCATCTaGAGATCTGCACAGCCCTCTTCTCACTTGAACAATTGTCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: SSRSRKTSHQDPDVI*RSAQPSSHLNNCPQ Trigger: TTGAGGACAATTGTTCAAGTGAGAAGAGGGCTGTGCAGATCTCAAGATGACATCGGGATCCTGATGTGAAGTTTTCCTGCTTCTGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000621390.1 ENST00000653260.1 |
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| CDS CAA 90 bp | AATATTCACCTCCATGAGATACTGCCAAATTGTTTTCCAATGTGGTaGCATCAATTTGCACTCCACCAGCAGTGTCGGGGAGGTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: NIHLHEILPNCFPMW*HQFALHQQCRGGLG Trigger: CCCAAGACCTCCCCGACACTGCTGGTGGAGTGCAAATTGATGCAACCACATTGGAAAACAATTTGGCAGTATCTCATGGAGGTGAATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS TCA 72 bp | GGGACTTGCATCCTCCGATATCCTTACACAATGGAATaGTCTGGTAGTCACAGGTACCAACAAGGCACTTCA | + |
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Preference number: 6 (lower is better) Translates to: GTCILRYPYTME*SGSHRYQQGTS Trigger: TGAAGTGCCTTGTTGGTACCTGTGACTACCAGATCATTCCATTGTGTAAGGATATCGGAGGATGCAAGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS CCA 72 bp | GACTTGCGCAGGGTCACAAGGTATGTCAAGCAGAGATaGCTGGGATTGAAATGGCAAATCCTTTCTCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: DLRRVTRYVKQR*LGLKWQILSLC Trigger: ACAAAGAGAAAGGATTTGCCATTTCAATCCCAGCCATCTCTGCTTGACATACCTTGTGACCCTGCGCAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS CCA 72 bp | TCTTGGGGACTTGCATCCTCCGATATCCTTACACAATaGAATGATCTGGTAGTCACAGGTACCAACAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SWGLASSDILTQ*NDLVVTGTNKA Trigger: TGCCTTGTTGGTACCTGTGACTACCAGATCATTCCATTGTGTAAGGATATCGGAGGATGCAAGTCCCCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS CAA 72 bp | CTCCATGAGATACTGCCAAATTGTTTTCCAATGTGGTaGCATCAATTTGCACTCCACCAGCAGTGTCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: LHEILPNCFPMW*HQFALHQQCRG Trigger: TCCCCGACACTGCTGGTGGAGTGCAAATTGATGCAACCACATTGGAAAACAATTTGGCAGTATCTCATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS CAA 90 bp | CCAGACTTGATGAGGTTGTCTCCAGACAGGCATCTGGGAGTGGAATaGCTGAATATTCACCTCCATGAGATACTGCCAAATTGTTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PDLMRLSPDRHLGVE*LNIHLHEILPNCFP Trigger: TGGAAAACAATTTGGCAGTATCTCATGGAGGTGAATATTCAGCAATTCCACTCCCAGATGCCTGTCTGGAGACAACCTCATCAAGTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS TCA 72 bp | GGTTGTCTCCAGACAGGCATCTGGGAGTGGAATTGCTaGATATTCACCTCCATGAGATACTGCCAAATTGTT | + |
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Preference number: 6 (lower is better) Translates to: GCLQTGIWEWNC*IFTSMRYCQIV Trigger: AACAATTTGGCAGTATCTCATGGAGGTGAATATTCAGCAATTCCACTCCCAGATGCCTGTCTGGAGACAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS GCA 72 bp | AACTTCACATCAGGATCCCGATGTCATCTTGAGATCTaGACAGCCCTCTTCTCACTTGAACAATTGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: NFTSGSRCHLEI*TALFSLEQLSS Trigger: TGAGGACAATTGTTCAAGTGAGAAGAGGGCTGTGCAGATCTCAAGATGACATCGGGATCCTGATGTGAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000621390.1 ENST00000653260.1 |
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| CDS CCA 72 bp | AACAAGGCACTTCATGGGTTACAAAGCAGGTTCCCATaGAATGTCTTTGCTGATCTCCAGTCAGTTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: NKALHGLQSRFP*NVFADLQSVSQ Trigger: CTGTGAAACTGACTGGAGATCAGCAAAGACATTCCATGGGAACCTGCTTTGTAACCCATGAAGTGCCTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS CAA 72 bp | AGCAGGAAAACTTCACATCAGGATCCCGATGTCATCTaGAGATCTGCACAGCCCTCTTCTCACTTGAACAAT | + |
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Preference number: 6 (lower is better) Translates to: SRKTSHQDPDVI*RSAQPSSHLNN Trigger: ATTGTTCAAGTGAGAAGAGGGCTGTGCAGATCTCAAGATGACATCGGGATCCTGATGTGAAGTTTTCCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000621390.1 ENST00000653260.1 |
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| CDS TCA 72 bp | TGGGTTACAAAGCAGGTTCCCATGGAATGTCTTTGCTaGTCTCCAGTCAGTTTCACAGATGGAGAAAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: WVTKQVPMECLC*SPVSFTDGERE Trigger: TTCTCTTTCTCCATCTGTGAAACTGACTGGAGATCAGCAAAGACATTCCATGGGAACCTGCTTTGTAACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS CAA 72 bp | TTCATGGGTTACAAAGCAGGTTCCCATGGAATGTCTTaGCTGATCTCCAGTCAGTTTCACAGATGGAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: FMGYKAGSHGMS*LISSQFHRWRK Trigger: CTTTCTCCATCTGTGAAACTGACTGGAGATCAGCAAAGACATTCCATGGGAACCTGCTTTGTAACCCATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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| CDS TCA 72 bp | GCATCTGGGAGTGGAATTGCTGAATATTCACCTCCATaGGATACTGCCAAATTGTTTTCCAATGTGGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: ASGSGIAEYSPP*DTAKLFSNVVA Trigger: TGCAACCACATTGGAAAACAATTTGGCAGTATCTCATGGAGGTGAATATTCAGCAATTCCACTCCCAGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653260.1 |
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