Pregenerated sensors for LINC01744 (Homo sapiens)
Ensembl gene IDs: ENSG00000236497Ensembl transcript IDs: ENST00000457698.1, ENST00000658542.1, ENST00000659372.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGCTTGGGGCTCTTAATGGCTCCCTCCTTGCTTGTAGGCAGGGCTaGAGCATCTGCCTTCCCTTCTTCCGCACTGCACCCTTCTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: QLGALNGSLLACRQG*SICLPFFRTAPFFP Trigger: AGGGAAGAAGGGTGCAGTGCGGAAGAAGGGAAGGCAGATGCTGCAGCCCTGCCTACAAGCAAGGAGGGAGCCATTAAGAGCCCCAAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS TCA 90 bp | TTCAAAGAGGTCTGCAACACTGCAGGTGACAGTTCCCATGAGATCTaGCTCCTGCCTCTCTTGTCAGCCCCATCTCTTGTTCCTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: FKEVCNTAGDSSHEI*LLPLLSAPSLVPPG Trigger: GCCAGGAGGAACAAGAGATGGGGCTGACAAGAGAGGCAGGAGTCAGATCTCATGGGAACTGTCACCTGCAGTGTTGCAGACCTCTTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS TCA 90 bp | ATCTGCCTTCCCTTCTTCCGCACTGCACCCTTCTTCCCTCGGACTTaGACTTTGCATCTTGGTTCACTCCTGGGTGTTCACCACTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: ICLPFFRTAPFFPRT*TLHLGSLLGVHHCP Trigger: AGGACAGTGGTGAACACCCAGGAGTGAACCAAGATGCAAAGTTCAAGTCCGAGGGAAGAAGGGTGCAGTGCGGAAGAAGGGAAGGCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS GCA 90 bp | AGGTCTGCAACACTGCAGGTGACAGTTCCCATGAGATCTGACTCCTaGCTCTCTTGTCAGCCCCATCTCTTGTTCCTCCTGGCTTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: RSATLQVTVPMRSDS*LSCQPHLLFLLALC Trigger: ACACAAAGCCAGGAGGAACAAGAGATGGGGCTGACAAGAGAGGCAGGAGTCAGATCTCATGGGAACTGTCACCTGCAGTGTTGCAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CCA 90 bp | CCATCTCTTGTTCCTCCTGGCTTTGTGTCTGCATTCCAGCCACATTaGCCTTGCGGGACCTTCAACACGTTCAGTTTGTTCCTCTACAGC | + |
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Preference number: 5 (lower is better) Translates to: PSLVPPGFVSAFQPH*PCGTFNTFSLFLYS Trigger: GCTGTAGAGGAACAAACTGAACGTGTTGAAGGTCCCGCAAGGCCAATGTGGCTGGAATGCAGACACAAAGCCAGGAGGAACAAGAGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CCA 90 bp | CACCCTTCTTCCCTCGGACTTGAACTTTGCATCTTGGTTCACTCCTaGGTGTTCACCACTGTCCTTCTGATTGCTATGTCCAGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: HPSSLGLELCILVHS*VFTTVLLIAMSSSS Trigger: GCTGCTGCTGGACATAGCAATCAGAAGGACAGTGGTGAACACCCAGGAGTGAACCAAGATGCAAAGTTCAAGTCCGAGGGAAGAAGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS TCA 90 bp | GTGTTCACCACTGTCCTTCTGATTGCTATGTCCAGCAGCAGCACATaGCCATCCAAAGGAAGCCACTGTCCCTTTAGAGTCATGCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: VFTTVLLIAMSSSST*PSKGSHCPFRVMLE Trigger: CTCCAGCATGACTCTAAAGGGACAGTGGCTTCCTTTGGATGGTCATGTGCTGCTGCTGGACATAGCAATCAGAAGGACAGTGGTGAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS GCA 90 bp | CTTGTTCCTCCTGGCTTTGTGTCTGCATTCCAGCCACATTGGCCTTaGGGGACCTTCAACACGTTCAGTTTGTTCCTCTACAGCAATGGA | + |
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Preference number: 5 (lower is better) Translates to: LVPPGFVSAFQPHWP*GTFNTFSLFLYSNG Trigger: TCCATTGCTGTAGAGGAACAAACTGAACGTGTTGAAGGTCCCGCAAGGCCAATGTGGCTGGAATGCAGACACAAAGCCAGGAGGAACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS GCA 90 bp | TTGCATCTTGGTTCACTCCTGGGTGTTCACCACTGTCCTTCTGATTaGTATGTCCAGCAGCAGCACATGACCATCCAAAGGAAGCCACTG | + |
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Preference number: 5 (lower is better) Translates to: LHLGSLLGVHHCPSD*YVQQQHMTIQRKPL Trigger: CAGTGGCTTCCTTTGGATGGTCATGTGCTGCTGCTGGACATAGCAATCAGAAGGACAGTGGTGAACACCCAGGAGTGAACCAAGATGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS GCA 90 bp | TTCCCTTCTTCCGCACTGCACCCTTCTTCCCTCGGACTTGAACTTTaGATCTTGGTTCACTCCTGGGTGTTCACCACTGTCCTTCTGATT | + |
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Preference number: 5 (lower is better) Translates to: FPSSALHPSSLGLEL*ILVHSWVFTTVLLI Trigger: AATCAGAAGGACAGTGGTGAACACCCAGGAGTGAACCAAGATGCAAAGTTCAAGTCCGAGGGAAGAAGGGTGCAGTGCGGAAGAAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS TCA 90 bp | AACTTTGCATCTTGGTTCACTCCTGGGTGTTCACCACTGTCCTTCTaGTTGCTATGTCCAGCAGCAGCACATGACCATCCAAAGGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: NFASWFTPGCSPLSF*LLCPAAAHDHPKEA Trigger: GGCTTCCTTTGGATGGTCATGTGCTGCTGCTGGACATAGCAATCAGAAGGACAGTGGTGAACACCCAGGAGTGAACCAAGATGCAAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS GCA 90 bp | GCAGCACATGACCATCCAAAGGAAGCCACTGTCCCTTTAGAGTCATaGTGGAGTTTGTCAGCAACATTTACTAGGTACCCCCTGCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: AAHDHPKEATVPLES*WSLSATFTRYPLPL Trigger: AAGAGGCAGGGGGTACCTAGTAAATGTTGCTGACAAACTCCAGCATGACTCTAAAGGGACAGTGGCTTCCTTTGGATGGTCATGTGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CCA 90 bp | GCACATGACCATCCAAAGGAAGCCACTGTCCCTTTAGAGTCATGCTaGAGTTTGTCAGCAACATTTACTAGGTACCCCCTGCCTCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: AHDHPKEATVPLESC*SLSATFTRYPLPLC Trigger: GCAAAGAGGCAGGGGGTACCTAGTAAATGTTGCTGACAAACTCCAGCATGACTCTAAAGGGACAGTGGCTTCCTTTGGATGGTCATGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS TCA 90 bp | CTATCCATGGGCTTATGTTTTCAGTCTGACTCTCTCCTGGACTCCTaGACTGCAAACCTAGCTCTCTTCTGGATCCCCCAAGCTCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: LSMGLCFQSDSLLDS*TANLALFWIPQALV Trigger: AACAAGAGCTTGGGGGATCCAGAAGAGAGCTAGGTTTGCAGTTCAGGAGTCCAGGAGAGAGTCAGACTGAAAACATAAGCCCATGGATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000457698.1 ENST00000658542.1 |
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| CDS TCA 90 bp | TCTGTGTTTCCCATAGGTGATCTTCATTCCCATGGCTTCAATGACTaGCTATCCATGGGCTTATGTTTTCAGTCTGACTCTCTCCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: SVFPIGDLHSHGFND*LSMGLCFQSDSLLD Trigger: GTCCAGGAGAGAGTCAGACTGAAAACATAAGCCCATGGATAGTCAGTCATTGAAGCCATGGGAATGAAGATCACCTATGGGAAACACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457698.1 ENST00000658542.1 |
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| CDS TCA 90 bp | ACCCCCTGCCTCTTTGCCATGAGGTCTTGGCAGGTACATCACTTATaGCAAATTGTTTTCAGATTAAGAGAGGTCTTATTGGGAGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: TPCLFAMRSWQVHHL*QIVFRLREVLLGAR Trigger: CCTTGCTCCCAATAAGACCTCTCTTAATCTGAAAACAATTTGTCATAAGTGATGTACCTGCCAAGACCTCATGGCAAAGAGGCAGGGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CCA 90 bp | GTAGAGCTCCCTATGAATGGACATTCCTGTGACCTCTTCCAGATCTaGGATATTCCAGAAGATGATGTATGGAAGAAGCTGTTTTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: VELPMNGHSCDLFQI*DIPEDDVWKKLFFR Trigger: GCGGAAAAACAGCTTCTTCCATACATCATCTTCTGGAATATCCCAGATCTGGAAGAGGTCACAGGAATGTCCATTCATAGGGAGCTCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CCA 90 bp | AAGTCAAAGCCCAAATTCTGGCCAAATGAGTGTCCTCTGTATGTATaGCTGATGCCTAGGTTCTCTGTAAATACATCAATACCAGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: KSKPKFWPNECPLYV*LMPRFSVNTSIPGS Trigger: GCTCCCTGGTATTGATGTATTTACAGAGAACCTAGGCATCAGCCATACATACAGAGGACACTCATTTGGCCAGAATTTGGGCTTTGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS TCA 90 bp | CAGTTTGTTCCTCTACAGCAATGGATCTTCATTCTCTCTCTCTCCTaGCTTGGGATTAGTGGGAAGATATCACAGATCACTCTATTCTCA | + |
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Preference number: 5 (lower is better) Translates to: QFVPLQQWIFILSLS*LGISGKISQITLFS Trigger: TGAGAATAGAGTGATCTGTGATATCTTCCCACTAATCCCAAGTCAGGAGAGAGAGAGAATGAAGATCCATTGCTGTAGAGGAACAAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457698.1 |
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| CDS CCA 90 bp | GGATTCATCCTTAGAAAGGGTTTATTTTCCTCTCACTTTCTCCACTaGTGTAAGATTACAGCTTTCCAGCGTCTCTTGGTGAGAAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: GFILRKGLFSSHFLH*CKITAFQRLLVRRK Trigger: TTTCCTTCTCACCAAGAGACGCTGGAAAGCTGTAATCTTACACCAGTGGAGAAAGTGAGAGGAAAATAAACCCTTTCTAAGGATGAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS TCA 90 bp | TCATTTGACTTCCAATATTTGTTAAACTGCATCTTATATGACTTCTaGATCCAAAGAGTCATGGTGAGGAATCCACCAACCCCAGATGGG | + |
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Preference number: 5 (lower is better) Translates to: SFDFQYLLNCILYDF*IQRVMVRNPPTPDG Trigger: CCCATCTGGGGTTGGTGGATTCCTCACCATGACTCTTTGGATTCAGAAGTCATATAAGATGCAGTTTAACAAATATTGGAAGTCAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CCA 90 bp | TGGCAATTATCCACAGTATATATTTTTGTAATATGCATAGCCCTGTaGTTTCCTGTTCCACAGAAAATTAGAAGTAGAAAGTTCAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: WQLSTVYIFVICIAL*FPVPQKIRSRKFSK Trigger: CTTGCTGAACTTTCTACTTCTAATTTTCTGTGGAACAGGAAACCACAGGGCTATGCATATTACAAAAATATATACTGTGGATAATTGCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659372.1 |
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| CDS CAA 72 bp | CGCCTGGCCAGCTTGGGGCTCTTAATGGCTCCCTCCTaGCTTGTAGGCAGGGCTGCAGCATCTGCCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: RLASLGLLMAPS*LVGRAAASAFP Trigger: AGGGAAGGCAGATGCTGCAGCCCTGCCTACAAGCAAGGAGGGAGCCATTAAGAGCCCCAAGCTGGCCAGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CAA 90 bp | AAGCCACTGCGCCTGGCCAGCTTGGGGCTCTTAATGGCTCCCTCCTaGCTTGTAGGCAGGGCTGCAGCATCTGCCTTCCCTTCTTCCGCA | + |
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Preference number: 6 (lower is better) Translates to: KPLRLASLGLLMAPS*LVGRAAASAFPSSA Trigger: TGCGGAAGAAGGGAAGGCAGATGCTGCAGCCCTGCCTACAAGCAAGGAGGGAGCCATTAAGAGCCCCAAGCTGGCCAGGCGCAGTGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS GCA 72 bp | GCTCTTAATGGCTCCCTCCTTGCTTGTAGGCAGGGCTaGAGCATCTGCCTTCCCTTCTTCCGCACTGCACCC | + |
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Preference number: 6 (lower is better) Translates to: ALNGSLLACRQG*SICLPFFRTAP Trigger: GGGTGCAGTGCGGAAGAAGGGAAGGCAGATGCTGCAGCCCTGCCTACAAGCAAGGAGGGAGCCATTAAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CAA 90 bp | CATCTGCCTTCCCTTCTTCCGCACTGCACCCTTCTTCCCTCGGACTaGAACTTTGCATCTTGGTTCACTCCTGGGTGTTCACCACTGTCC | + |
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Preference number: 6 (lower is better) Translates to: HLPSLLPHCTLLPSD*NFASWFTPGCSPLS Trigger: GGACAGTGGTGAACACCCAGGAGTGAACCAAGATGCAAAGTTCAAGTCCGAGGGAAGAAGGGTGCAGTGCGGAAGAAGGGAAGGCAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS TCA 72 bp | CCCTTCTTCCGCACTGCACCCTTCTTCCCTCGGACTTaGACTTTGCATCTTGGTTCACTCCTGGGTGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: PFFRTAPFFPRT*TLHLGSLLGVH Trigger: GTGAACACCCAGGAGTGAACCAAGATGCAAAGTTCAAGTCCGAGGGAAGAAGGGTGCAGTGCGGAAGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS GCA 72 bp | ACACTGCAGGTGACAGTTCCCATGAGATCTGACTCCTaGCTCTCTTGTCAGCCCCATCTCTTGTTCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: TLQVTVPMRSDS*LSCQPHLLFLL Trigger: CAGGAGGAACAAGAGATGGGGCTGACAAGAGAGGCAGGAGTCAGATCTCATGGGAACTGTCACCTGCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS TCA 72 bp | GTCTGCAACACTGCAGGTGACAGTTCCCATGAGATCTaGCTCCTGCCTCTCTTGTCAGCCCCATCTCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: VCNTAGDSSHEI*LLPLLSAPSLV Trigger: AACAAGAGATGGGGCTGACAAGAGAGGCAGGAGTCAGATCTCATGGGAACTGTCACCTGCAGTGTTGCAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS GCA 72 bp | CCTGGCTTTGTGTCTGCATTCCAGCCACATTGGCCTTaGGGGACCTTCAACACGTTCAGTTTGTTCCTCTAC | + |
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Preference number: 6 (lower is better) Translates to: PGFVSAFQPHWP*GTFNTFSLFLY Trigger: GTAGAGGAACAAACTGAACGTGTTGAAGGTCCCGCAAGGCCAATGTGGCTGGAATGCAGACACAAAGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS GCA 72 bp | GGTTCACTCCTGGGTGTTCACCACTGTCCTTCTGATTaGTATGTCCAGCAGCAGCACATGACCATCCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: GSLLGVHHCPSD*YVQQQHMTIQR Trigger: CCTTTGGATGGTCATGTGCTGCTGCTGGACATAGCAATCAGAAGGACAGTGGTGAACACCCAGGAGTGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CAA 90 bp | CCCATCTCTTGTTCCTCCTGGCTTTGTGTCTGCATTCCAGCCACATaGGCCTTGCGGGACCTTCAACACGTTCAGTTTGTTCCTCTACAG | + |
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Preference number: 6 (lower is better) Translates to: PISCSSWLCVCIPAT*ALRDLQHVQFVPLQ Trigger: CTGTAGAGGAACAAACTGAACGTGTTGAAGGTCCCGCAAGGCCAATGTGGCTGGAATGCAGACACAAAGCCAGGAGGAACAAGAGATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CAA 90 bp | TCTTGTTCCTCCTGGCTTTGTGTCTGCATTCCAGCCACATTGGCCTaGCGGGACCTTCAACACGTTCAGTTTGTTCCTCTACAGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: SCSSWLCVCIPATLA*RDLQHVQFVPLQQW Trigger: CCATTGCTGTAGAGGAACAAACTGAACGTGTTGAAGGTCCCGCAAGGCCAATGTGGCTGGAATGCAGACACAAAGCCAGGAGGAACAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CAA 90 bp | TCTTCCGCACTGCACCCTTCTTCCCTCGGACTTGAACTTTGCATCTaGGTTCACTCCTGGGTGTTCACCACTGTCCTTCTGATTGCTATG | + |
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Preference number: 6 (lower is better) Translates to: SSALHPSSLGLELCI*VHSWVFTTVLLIAM Trigger: CATAGCAATCAGAAGGACAGTGGTGAACACCCAGGAGTGAACCAAGATGCAAAGTTCAAGTCCGAGGGAAGAAGGGTGCAGTGCGGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS TCA 72 bp | TCTTGGTTCACTCCTGGGTGTTCACCACTGTCCTTCTaGTTGCTATGTCCAGCAGCAGCACATGACCATCCA | + |
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Preference number: 6 (lower is better) Translates to: SWFTPGCSPLSF*LLCPAAAHDHP Trigger: TGGATGGTCATGTGCTGCTGCTGGACATAGCAATCAGAAGGACAGTGGTGAACACCCAGGAGTGAACCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS GCA 72 bp | GCTGGAGTTTGTCAGCAACATTTACTAGGTACCCCCTaGCTCTTTGCCATGAGGTCTTGGCAGGTACATCAC | + |
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Preference number: 6 (lower is better) Translates to: AGVCQQHLLGTP*LFAMRSWQVHH Trigger: GTGATGTACCTGCCAAGACCTCATGGCAAAGAGGCAGGGGGTACCTAGTAAATGTTGCTGACAAACTCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CAA 72 bp | TCCTGGCTTTGTGTCTGCATTCCAGCCACATTGGCCTaGCGGGACCTTCAACACGTTCAGTTTGTTCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: SWLCVCIPATLA*RDLQHVQFVPL Trigger: TAGAGGAACAAACTGAACGTGTTGAAGGTCCCGCAAGGCCAATGTGGCTGGAATGCAGACACAAAGCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CAA 90 bp | GCATTCCAGCCACATTGGCCTTGCGGGACCTTCAACACGTTCAGTTaGTTCCTCTACAGCAATGGATCTTCATTCTCTCTCTCTCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: AFQPHWPCGTFNTFS*FLYSNGSSFSLSPD Trigger: GTCAGGAGAGAGAGAGAATGAAGATCCATTGCTGTAGAGGAACAAACTGAACGTGTTGAAGGTCCCGCAAGGCCAATGTGGCTGGAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS TCA 72 bp | GGCTTATGTTTTCAGTCTGACTCTCTCCTGGACTCCTaGACTGCAAACCTAGCTCTCTTCTGGATCCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: GLCFQSDSLLDS*TANLALFWIPQ Trigger: TTGGGGGATCCAGAAGAGAGCTAGGTTTGCAGTTCAGGAGTCCAGGAGAGAGTCAGACTGAAAACATAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000457698.1 ENST00000658542.1 |
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| CDS TCA 72 bp | ACTGTCCTTCTGATTGCTATGTCCAGCAGCAGCACATaGCCATCCAAAGGAAGCCACTGTCCCTTTAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: TVLLIAMSSSST*PSKGSHCPFRV Trigger: GACTCTAAAGGGACAGTGGCTTCCTTTGGATGGTCATGTGCTGCTGCTGGACATAGCAATCAGAAGGACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CCA 72 bp | CATCCAAAGGAAGCCACTGTCCCTTTAGAGTCATGCTaGAGTTTGTCAGCAACATTTACTAGGTACCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: HPKEATVPLESC*SLSATFTRYPL Trigger: CAGGGGGTACCTAGTAAATGTTGCTGACAAACTCCAGCATGACTCTAAAGGGACAGTGGCTTCCTTTGGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CAA 72 bp | CCACATTGGCCTTGCGGGACCTTCAACACGTTCAGTTaGTTCCTCTACAGCAATGGATCTTCATTCTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: PHWPCGTFNTFS*FLYSNGSSFSL Trigger: GAGAGAGAATGAAGATCCATTGCTGTAGAGGAACAAACTGAACGTGTTGAAGGTCCCGCAAGGCCAATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CAA 72 bp | AAGGAAGCCACTGTCCCTTTAGAGTCATGCTGGAGTTaGTCAGCAACATTTACTAGGTACCCCCTGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: KEATVPLESCWS*SATFTRYPLPL Trigger: AAGAGGCAGGGGGTACCTAGTAAATGTTGCTGACAAACTCCAGCATGACTCTAAAGGGACAGTGGCTTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS TCA 72 bp | GCATCTTATATGACTTCTGAATCCAAAGAGTCATGGTaGGGAATCCACCAACCCCAGATGGGTCCACGACTA | + |
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Preference number: 6 (lower is better) Translates to: ASYMTSESKESW*GIHQPQMGPRL Trigger: TAGTCGTGGACCCATCTGGGGTTGGTGGATTCCTCACCATGACTCTTTGGATTCAGAAGTCATATAAGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS TCA 72 bp | CCCATAGGTGATCTTCATTCCCATGGCTTCAATGACTaGCTATCCATGGGCTTATGTTTTCAGTCTGACTCT | + |
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Preference number: 6 (lower is better) Translates to: PIGDLHSHGFND*LSMGLCFQSDS Trigger: AGAGTCAGACTGAAAACATAAGCCCATGGATAGTCAGTCATTGAAGCCATGGGAATGAAGATCACCTATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457698.1 ENST00000658542.1 |
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| CDS TCA 72 bp | CCTCTACAGCAATGGATCTTCATTCTCTCTCTCTCCTaGCTTGGGATTAGTGGGAAGATATCACAGATCACT | + |
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Preference number: 6 (lower is better) Translates to: PLQQWIFILSLS*LGISGKISQIT Trigger: AGTGATCTGTGATATCTTCCCACTAATCCCAAGTCAGGAGAGAGAGAGAATGAAGATCCATTGCTGTAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CCA 72 bp | CCTATGAATGGACATTCCTGTGACCTCTTCCAGATCTaGGATATTCCAGAAGATGATGTATGGAAGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PMNGHSCDLFQI*DIPEDDVWKKL Trigger: CAGCTTCTTCCATACATCATCTTCTGGAATATCCCAGATCTGGAAGAGGTCACAGGAATGTCCATTCATAGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CAA 90 bp | TTGTTCCTCTACAGCAATGGATCTTCATTCTCTCTCTCTCCTGACTaGGGATTAGTGGGAAGATATCACAGATCACTCTATTCTCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LFLYSNGSSFSLSPD*GLVGRYHRSLYSQS Trigger: GGACTGAGAATAGAGTGATCTGTGATATCTTCCCACTAATCCCAAGTCAGGAGAGAGAGAGAATGAAGATCCATTGCTGTAGAGGAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457698.1 |
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| CDS CAA 90 bp | TTGTTCCTCTACAGCAATGGATCTTCATTCTCTCTCTCTCCTGACTaGGGATTAGTGGGAAGATATCACAGATCACTCTATTCTGACCTC | + |
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Preference number: 6 (lower is better) Translates to: LFLYSNGSSFSLSPD*GLVGRYHRSLYSDL Trigger: GAGGTCAGAATAGAGTGATCTGTGATATCTTCCCACTAATCCCAAGTCAGGAGAGAGAGAGAATGAAGATCCATTGCTGTAGAGGAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658542.1 |
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| CDS CCA 72 bp | CTTAGAAAGGGTTTATTTTCCTCTCACTTTCTCCACTaGTGTAAGATTACAGCTTTCCAGCGTCTCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LRKGLFSSHFLH*CKITAFQRLLV Trigger: CACCAAGAGACGCTGGAAAGCTGTAATCTTACACCAGTGGAGAAAGTGAGAGGAAAATAAACCCTTTCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CAA 72 bp | TACAGCAATGGATCTTCATTCTCTCTCTCTCCTGACTaGGGATTAGTGGGAAGATATCACAGATCACTCTAT | + |
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Preference number: 6 (lower is better) Translates to: YSNGSSFSLSPD*GLVGRYHRSLY Trigger: ATAGAGTGATCTGTGATATCTTCCCACTAATCCCAAGTCAGGAGAGAGAGAGAATGAAGATCCATTGCTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CAA 90 bp | TCTCACTTTCTCCACTGGTGTAAGATTACAGCTTTCCAGCGTCTCTaGGTGAGAAGGAAATACAACTTGATTCCTCTGTCTGATAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: SHFLHWCKITAFQRL*VRRKYNLIPLSDKV Trigger: TACTTTATCAGACAGAGGAATCAAGTTGTATTTCCTTCTCACCAAGAGACGCTGGAAAGCTGTAATCTTACACCAGTGGAGAAAGTGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS CAA 90 bp | TTGTTCCTCTACAGCAATGGATCTTCATTCTCTCTCTCTCCTGACTaGGGATTAGTGGGAAGATATCACAGATCACTCTATTCTGAAACA | + |
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Preference number: 6 (lower is better) Translates to: LFLYSNGSSFSLSPD*GLVGRYHRSLYSET Trigger: TGTTTCAGAATAGAGTGATCTGTGATATCTTCCCACTAATCCCAAGTCAGGAGAGAGAGAGAATGAAGATCCATTGCTGTAGAGGAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659372.1 |
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| CDS TCA 72 bp | TCAGTCCTTTGCTGCCTGTTATTTTTGATGAATGATTaGTTGTGGTGCCCTGACCTCTTTGCAGCAATTAAT | + |
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Preference number: 6 (lower is better) Translates to: SVLCCLLFLMND*LWCPDLFAAIN Trigger: ATTAATTGCTGCAAAGAGGTCAGGGCACCACAATCAATCATTCATCAAAAATAACAGGCAGCAAAGGACTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457698.1 |
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| CDS TCA 72 bp | CTCTTTGCCATGAGGTCTTGGCAGGTACATCACTTATaGCAAATTGTTTTCAGATTAAGAGAGGTCTTATTG | + |
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Preference number: 6 (lower is better) Translates to: LFAMRSWQVHHL*QIVFRLREVLL Trigger: CAATAAGACCTCTCTTAATCTGAAAACAATTTGTCATAAGTGATGTACCTGCCAAGACCTCATGGCAAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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| CDS TCA 72 bp | TTCCAATATTTGTTAAACTGCATCTTATATGACTTCTaGATCCAAAGAGTCATGGTGAGGAATCCACCAACC | + |
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Preference number: 6 (lower is better) Translates to: FQYLLNCILYDF*IQRVMVRNPPT Trigger: GGTTGGTGGATTCCTCACCATGACTCTTTGGATTCAGAAGTCATATAAGATGCAGTTTAACAAATATTGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457698.1 ENST00000658542.1 ENST00000659372.1 |
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