Pregenerated sensors for LINC01734 (Homo sapiens)
Ensembl gene IDs: ENSG00000230324Ensembl transcript IDs: ENST00000412672.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGTCTGGACAAGGAGGGAGGCCTTCCAAAGGACACAGTTTCTAGGTaGTTAGTTTTGGACATCCTGATATATCTTGTCAGGGGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SLDKEGGLPKDTVSR*LVLDILIYLVRGSS Trigger: GCTGCTGCCCCTGACAAGATATATCAGGATGTCCAAAACTAACCACCTAGAAACTGTGTCCTTTGGAAGGCCTCCCTCCTTGTCCAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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| CDS TCA 90 bp | GATGAAATAGCAAGCATTCTTGGGTCATCTGGGATGAGAGGAGTCTaGTTTGAGAACGTTGCTCCGAGGATTAGGGAGAAACATCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: DEIASILGSSGMRGV*FENVAPRIREKHQK Trigger: CTTCTGATGTTTCTCCCTAATCCTCGGAGCAACGTTCTCAAATCAGACTCCTCTCATCCCAGATGACCCAAGAATGCTTGCTATTTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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| CDS CCA 90 bp | AGCTGCCAATTAACTCTTTGTTGTAGAGAGCTGTCTGGTGGTTGGTaGAATTTAGCAGTCTCAGGACACTTGGCTTCCCTTTTGTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SCQLTLCCRELSGGW*NLAVSGHLASLLFS Trigger: GGAAAACAAAAGGGAAGCCAAGTGTCCTGAGACTGCTAAATTCCACCAACCACCAGACAGCTCTCTACAACAAAGAGTTAATTGGCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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| CDS CCA 90 bp | CACAGCTGCCAATTAACTCTTTGTTGTAGAGAGCTGTCTGGTGGTTaGTGGAATTTAGCAGTCTCAGGACACTTGGCTTCCCTTTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: HSCQLTLCCRELSGG*WNLAVSGHLASLLF Trigger: AAACAAAAGGGAAGCCAAGTGTCCTGAGACTGCTAAATTCCACCAACCACCAGACAGCTCTCTACAACAAAGAGTTAATTGGCAGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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| CDS TCA 90 bp | ACCATCCATCATGTCAAATTGTATGTACAACTGTCTTCTCCATTATaGGCTACTGAAGGCAGGTCTTGTGTCTTTTTCTTCTGTCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: TIHHVKLYVQLSSPL*ATEGRSCVFFFCRL Trigger: GAGGCGACAGAAGAAAAAGACACAAGACCTGCCTTCAGTAGCTCATAATGGAGAAGACAGTTGTACATACAATTTGACATGATGGATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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| CDS TCA 90 bp | TATTTACCAGATTGGAATTGGATCAGAAGTTCTCTTAGAAAGAGATaGAATAGCAAGCATTCTTGGGTCATCTGGGATGAGAGGAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: YLPDWNWIRSSLRKR*NSKHSWVIWDERSL Trigger: CAGACTCCTCTCATCCCAGATGACCCAAGAATGCTTGCTATTTCATCTCTTTCTAAGAGAACTTCTGATCCAATTCCAATCTGGTAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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| CDS CAA 72 bp | TCGCCTCCTAGCATAGCACCAGGCACACTAGTTGTGTaGATTAGTGTTTGTCAGTTCCATAAGGCCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: SPPSIAPGTLVV*ISVCQFHKATR Trigger: CCTGGTGGCCTTATGGAACTGACAAACACTAATCAACACAACTAGTGTGCCTGGTGCTATGCTAGGAGGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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| CDS CAA 72 bp | GGCCTTCCAAAGGACACAGTTTCTAGGTGGTTAGTTTaGGACATCCTGATATATCTTGTCAGGGGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GLPKDTVSRWLV*DILIYLVRGSS Trigger: GCTGCTGCCCCTGACAAGATATATCAGGATGTCCAAAACTAACCACCTAGAAACTGTGTCCTTTGGAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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| CDS CAA 90 bp | AAGGAGGGAGGCCTTCCAAAGGACACAGTTTCTAGGTGGTTAGTTTaGGACATCCTGATATATCTTGTCAGGGGCAGCAGCAAAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: KEGGLPKDTVSRWLV*DILIYLVRGSSKAL Trigger: CAAAGCTTTGCTGCTGCCCCTGACAAGATATATCAGGATGTCCAAAACTAACCACCTAGAAACTGTGTCCTTTGGAAGGCCTCCCTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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| CDS CAA 90 bp | TTTCTTCTGTCGCCTCCTAGCATAGCACCAGGCACACTAGTTGTGTaGATTAGTGTTTGTCAGTTCCATAAGGCCACCAGGATGCTTATG | + |
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Preference number: 6 (lower is better) Translates to: FLLSPPSIAPGTLVV*ISVCQFHKATRMLM Trigger: CATAAGCATCCTGGTGGCCTTATGGAACTGACAAACACTAATCAACACAACTAGTGTGCCTGGTGCTATGCTAGGAGGCGACAGAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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| CDS CCA 72 bp | TTAACTCTTTGTTGTAGAGAGCTGTCTGGTGGTTGGTaGAATTTAGCAGTCTCAGGACACTTGGCTTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: LTLCCRELSGGW*NLAVSGHLASL Trigger: AAGGGAAGCCAAGTGTCCTGAGACTGCTAAATTCCACCAACCACCAGACAGCTCTCTACAACAAAGAGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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| CDS CCA 72 bp | AAGGAGGGAGGCCTTCCAAAGGACACAGTTTCTAGGTaGTTAGTTTTGGACATCCTGATATATCTTGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: KEGGLPKDTVSR*LVLDILIYLVR Trigger: CCTGACAAGATATATCAGGATGTCCAAAACTAACCACCTAGAAACTGTGTCCTTTGGAAGGCCTCCCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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| CDS TCA 72 bp | GAACTGTCTTGGTTCCTGCCTCCATGGGTAAACAGCTaGGTAAGAGAGGCTATGAGTCTCAATTTTCTTATC | + |
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Preference number: 6 (lower is better) Translates to: ELSWFLPPWVNS*VREAMSLNFLI Trigger: GATAAGAAAATTGAGACTCATAGCCTCTCTTACTCAGCTGTTTACCCATGGAGGCAGGAACCAAGACAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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| CDS TCA 72 bp | ATTGTATGTACAACTGTCTTCTCCATTATGAGCTACTaGAGGCAGGTCTTGTGTCTTTTTCTTCTGTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: IVCTTVFSIMSY*RQVLCLFLLSP Trigger: AGGCGACAGAAGAAAAAGACACAAGACCTGCCTTCAGTAGCTCATAATGGAGAAGACAGTTGTACATACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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| CDS TCA 72 bp | GATTGGAATTGGATCAGAAGTTCTCTTAGAAAGAGATaGAATAGCAAGCATTCTTGGGTCATCTGGGATGAG | + |
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Preference number: 6 (lower is better) Translates to: DWNWIRSSLRKR*NSKHSWVIWDE Trigger: CTCATCCCAGATGACCCAAGAATGCTTGCTATTTCATCTCTTTCTAAGAGAACTTCTGATCCAATTCCAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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| CDS TCA 72 bp | CATGTCAAATTGTATGTACAACTGTCTTCTCCATTATaGGCTACTGAAGGCAGGTCTTGTGTCTTTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: HVKLYVQLSSPL*ATEGRSCVFFF Trigger: GAAGAAAAAGACACAAGACCTGCCTTCAGTAGCTCATAATGGAGAAGACAGTTGTACATACAATTTGACATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412672.1 |
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