Pregenerated sensors for LINC01732 (Homo sapiens)
Ensembl gene IDs: ENSG00000237292Ensembl transcript IDs: ENST00000435023.1, ENST00000438428.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GTTTTATATGCTAGCACAGTTCCAGGGCTTCTGTTTCTCCTCCCTTaGTTCTTCCCTAGGGGCGGGCTGTCCAGGGCTGTCCACTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: VLYASTVPGLLFLLP*FFPRGGLSRAVHLC Trigger: ACACAAGTGGACAGCCCTGGACAGCCCGCCCCTAGGGAAGAATCAAGGGAGGAGAAACAGAAGCCCTGGAACTGTGCTAGCATATAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000435023.1 ENST00000438428.1 |
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| CDS CCA 90 bp | TCATTTGAGGCATTTCTCCCCTTACCAGTAGAGTGTTCCTCAGGCTaGGGAGGGAGTGGCCTTGGGTTCACCTGTTTTCTGGCTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: SFEAFLPLPVECSSG*GGSGLGFTCFLALP Trigger: AGGAAGAGCCAGAAAACAGGTGAACCCAAGGCCACTCCCTCCCCAGCCTGAGGAACACTCTACTGGTAAGGGGAGAAATGCCTCAAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435023.1 |
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| CDS GCA 90 bp | GGGCACTTGGGAGGGGCCACATGCACAGCATGTTTACTGAAGTTGTaGACATGCTCATTTGAGGCATTTCTCCCCTTACCAGTAGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: GHLGGATCTACLLKL*TCSFEAFLPLPVEC Trigger: ACACTCTACTGGTAAGGGGAGAAATGCCTCAAATGAGCATGTGCACAACTTCAGTAAACATGCTGTGCATGTGGCCCCTCCCAAGTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000435023.1 ENST00000438428.1 |
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| CDS GCA 90 bp | TTGGGAGGGGCCACATGCACAGCATGTTTACTGAAGTTGTGCACATaGTCATTTGAGGCATTTCTCCCCTTACCAGTAGAGTGTTCCTAC | + |
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Preference number: 5 (lower is better) Translates to: LGGATCTACLLKLCT*SFEAFLPLPVECSY Trigger: GTAGGAACACTCTACTGGTAAGGGGAGAAATGCCTCAAATGAGCATGTGCACAACTTCAGTAAACATGCTGTGCATGTGGCCCCTCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438428.1 |
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| CDS GCA 90 bp | TTGGGAGGGGCCACATGCACAGCATGTTTACTGAAGTTGTGCACATaGTCATTTGAGGCATTTCTCCCCTTACCAGTAGAGTGTTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LGGATCTACLLKLCT*SFEAFLPLPVECSS Trigger: TGAGGAACACTCTACTGGTAAGGGGAGAAATGCCTCAAATGAGCATGTGCACAACTTCAGTAAACATGCTGTGCATGTGGCCCCTCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435023.1 |
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| CDS CAA 72 bp | TTCTTCCCTAGGGGCGGGCTGTCCAGGGCTGTCCACTaGTGTGGTGGCCTGCGGGCACTTGGGAGGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: FFPRGGLSRAVH*CGGLRALGRGH Trigger: GTGGCCCCTCCCAAGTGCCCGCAGGCCACCACACAAGTGGACAGCCCTGGACAGCCCGCCCCTAGGGAAGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000435023.1 ENST00000438428.1 |
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| CDS GCA 72 bp | GCGGGCTGTCCAGGGCTGTCCACTTGTGTGGTGGCCTaGGGGCACTTGGGAGGGGCCACATGCACAGCATGT | + |
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Preference number: 6 (lower is better) Translates to: AGCPGLSTCVVA*GHLGGATCTAC Trigger: ACATGCTGTGCATGTGGCCCCTCCCAAGTGCCCGCAGGCCACCACACAAGTGGACAGCCCTGGACAGCCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000435023.1 ENST00000438428.1 |
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| CDS CAA 72 bp | CCAGGGCTGTCCACTTGTGTGGTGGCCTGCGGGCACTaGGGAGGGGCCACATGCACAGCATGTTTACTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PGLSTCVVACGH*GGATCTACLLK Trigger: CTTCAGTAAACATGCTGTGCATGTGGCCCCTCCCAAGTGCCCGCAGGCCACCACACAAGTGGACAGCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000435023.1 ENST00000438428.1 |
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| CDS TCA 72 bp | GCTAGCACAGTTCCAGGGCTTCTGTTTCTCCTCCCTTaGTTCTTCCCTAGGGGCGGGCTGTCCAGGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: ASTVPGLLFLLP*FFPRGGLSRAV Trigger: GACAGCCCTGGACAGCCCGCCCCTAGGGAAGAATCAAGGGAGGAGAAACAGAAGCCCTGGAACTGTGCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000435023.1 ENST00000438428.1 |
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| CDS GCA 72 bp | TGTGTGGTGGCCTGCGGGCACTTGGGAGGGGCCACATaGACAGCATGTTTACTGAAGTTGTGCACATGCTCA | + |
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Preference number: 6 (lower is better) Translates to: CVVACGHLGGAT*TACLLKLCTCS Trigger: TGAGCATGTGCACAACTTCAGTAAACATGCTGTGCATGTGGCCCCTCCCAAGTGCCCGCAGGCCACCACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000435023.1 ENST00000438428.1 |
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| CDS CAA 90 bp | TCGTGCTGTGCTCCTCATGGCCATATTCCTGGCCTCCCAGCAGCCTaGGCCTGTATTAGCTGGTCAGTGACCTGTTTTCTGGCTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SCCAPHGHIPGLPAA*ACISWSVTCFLALP Trigger: AGGAAGAGCCAGAAAACAGGTCACTGACCAGCTAATACAGGCCAAGGCTGCTGGGAGGCCAGGAATATGGCCATGAGGAGCACAGCACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438428.1 |
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| CDS CCA 72 bp | GCATTTCTCCCCTTACCAGTAGAGTGTTCCTCAGGCTaGGGAGGGAGTGGCCTTGGGTTCACCTGTTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: AFLPLPVECSSG*GGSGLGFTCFL Trigger: CAGAAAACAGGTGAACCCAAGGCCACTCCCTCCCCAGCCTGAGGAACACTCTACTGGTAAGGGGAGAAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435023.1 |
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| CDS TCA 72 bp | GGTGACTTGAGAGATCCAAGTGTGCCATTCAGCCCTTaGCTTGGGGTTTTATATGCTAGCACAGTTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GDLRDPSVPFSP*LGVLYASTVPG Trigger: CCCTGGAACTGTGCTAGCATATAAAACCCCAAGTCAAGGGCTGAATGGCACACTTGGATCTCTCAAGTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000435023.1 ENST00000438428.1 |
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| CDS TCA 72 bp | ATGGAAGTAAATACACTTGGAAGGGGGCCAAGCAGGTaGCTTGAGAGATCCAAGTGTGCCATTCAGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: MEVNTLGRGPSR*LERSKCAIQPL Trigger: CAAGGGCTGAATGGCACACTTGGATCTCTCAAGTCACCTGCTTGGCCCCCTTCCAAGTGTATTTACTTCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000435023.1 ENST00000438428.1 |
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| CDS GCA 72 bp | GGAGGGGCCACATGCACAGCATGTTTACTGAAGTTGTaGACATGCTCATTTGAGGCATTTCTCCCCTTACCA | + |
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Preference number: 6 (lower is better) Translates to: GGATCTACLLKL*TCSFEAFLPLP Trigger: TGGTAAGGGGAGAAATGCCTCAAATGAGCATGTGCACAACTTCAGTAAACATGCTGTGCATGTGGCCCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000435023.1 ENST00000438428.1 |
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| CDS GCA 72 bp | GCCACATGCACAGCATGTTTACTGAAGTTGTGCACATaGTCATTTGAGGCATTTCTCCCCTTACCAGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: ATCTACLLKLCT*SFEAFLPLPVE Trigger: CTCTACTGGTAAGGGGAGAAATGCCTCAAATGAGCATGTGCACAACTTCAGTAAACATGCTGTGCATGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000435023.1 ENST00000438428.1 |
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| CDS TCA 72 bp | CACAGCATGTTTACTGAAGTTGTGCACATGCTCATTTaGGGCATTTCTCCCCTTACCAGTAGAGTGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: HSMFTEVVHMLI*GISPLTSRVFL Trigger: GAGGAACACTCTACTGGTAAGGGGAGAAATGCCTCAAATGAGCATGTGCACAACTTCAGTAAACATGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435023.1 |
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| CDS TCA 72 bp | CACAGCATGTTTACTGAAGTTGTGCACATGCTCATTTaGGGCATTTCTCCCCTTACCAGTAGAGTGTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: HSMFTEVVHMLI*GISPLTSRVFL Trigger: TAGGAACACTCTACTGGTAAGGGGAGAAATGCCTCAAATGAGCATGTGCACAACTTCAGTAAACATGCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438428.1 |
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