Pregenerated sensors for LINC01727 (Homo sapiens)
Ensembl gene IDs: ENSG00000279082Ensembl transcript IDs: ENST00000622928.1, ENST00000623256.3, ENST00000624367.4, ENST00000624385.1, ENST00000653224.1, ENST00000653966.1, ENST00000654700.1, ENST00000655015.1, ENST00000655574.1, ENST00000659009.1, ENST00000661947.1, ENST00000663538.1, ENST00000665084.1, ENST00000666232.1, ENST00000668557.1, ENST00000668638.1, ENST00000668797.1, ENST00000669771.1
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGCCTGGTCCCTCACCAAGGTGCCAGGATTGAGCTGACCACGAGATaGCAGTCTTTCCTTGCATCAGGCTGGCCGAAGCCTGCATCCCCA | + |
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Preference number: 5 (lower is better) Translates to: SLVPHQGARIELTTR*QSFLASGWPKPASP Trigger: TGGGGATGCAGGCTTCGGCCAGCCTGATGCAAGGAAAGACTGCCATCTCGTGGTCAGCTCAATCCTGGCACCTTGGTGAGGGACCAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000623256.3 ENST00000624367.4 ENST00000624385.1 ENST00000653224.1 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 ENST00000669771.1 |
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| CDS TCA 90 bp | TGGTTTTCTGCAGCCTGGTCCCTCACCAAGGTGCCAGGATTGAGCTaGCCACGAGATGGCAGTCTTTCCTTGCATCAGGCTGGCCGAAGC | + |
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Preference number: 5 (lower is better) Translates to: WFSAAWSLTKVPGLS*PRDGSLSLHQAGRS Trigger: GCTTCGGCCAGCCTGATGCAAGGAAAGACTGCCATCTCGTGGTCAGCTCAATCCTGGCACCTTGGTGAGGGACCAGGCTGCAGAAAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000623256.3 ENST00000624367.4 ENST00000624385.1 ENST00000653224.1 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 ENST00000669771.1 |
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| CDS TCA 90 bp | AAGCCTGGTTTTCTGCAGCCTGGTCCCTCACCAAGGTGCCAGGATTaGGCTGACCACGAGATGGCAGTCTTTCCTTGCATCAGGCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: KPGFLQPGPSPRCQD*ADHEMAVFPCIRLA Trigger: GGCCAGCCTGATGCAAGGAAAGACTGCCATCTCGTGGTCAGCTCAATCCTGGCACCTTGGTGAGGGACCAGGCTGCAGAAAACCAGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000623256.3 ENST00000624367.4 ENST00000624385.1 ENST00000653224.1 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 ENST00000669771.1 |
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| CDS TCA 90 bp | AGGTCGTGGGGCACTGGAAATTCTCCTGCGCAGCTGTTGGGAGTGTaGGCTGGCACATGCTGCCTGGAGGGAAGTCGGGCACATAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: RSWGTGNSPAQLLGV*AGTCCLEGSRAHSK Trigger: TTTACTATGTGCCCGACTTCCCTCCAGGCAGCATGTGCCAGCTCACACTCCCAACAGCTGCGCAGGAGAATTTCCAGTGCCCCACGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653966.1 ENST00000663538.1 |
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| CDS GCA 90 bp | AGGAAGCCTAGTATTGACAAGGTCGTGGGGCACTGGAAATTCTCCTaGGCAGCTGTTGGGAGTGTGAGCTGGCACATGCTGCCTGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: RKPSIDKVVGHWKFS*AAVGSVSWHMLPGG Trigger: CCCTCCAGGCAGCATGTGCCAGCTCACACTCCCAACAGCTGCGCAGGAGAATTTCCAGTGCCCCACGACCTTGTCAATACTAGGCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653966.1 ENST00000663538.1 |
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| CDS CCA 90 bp | TGTCCGGCAGAAATCCAGTTTGCAGCACCGTTTCCTCCCCAAGCCTaGTTTTCTGCAGCCTGGTCCCTCACCAAGGTGCCAGGATTGAGC | + |
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Preference number: 5 (lower is better) Translates to: CPAEIQFAAPFPPQA*FSAAWSLTKVPGLS Trigger: GCTCAATCCTGGCACCTTGGTGAGGGACCAGGCTGCAGAAAACCAGGCTTGGGGAGGAAACGGTGCTGCAAACTGGATTTCTGCCGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000623256.3 ENST00000624367.4 ENST00000624385.1 ENST00000653224.1 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 ENST00000669771.1 |
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| CDS GCA 90 bp | AGAAATCCAGTTTGCAGCACCGTTTCCTCCCCAAGCCTGGTTTTCTaGAGCCTGGTCCCTCACCAAGGTGCCAGGATTGAGCTGACCACG | + |
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Preference number: 5 (lower is better) Translates to: RNPVCSTVSSPSLVF*SLVPHQGARIELTT Trigger: CGTGGTCAGCTCAATCCTGGCACCTTGGTGAGGGACCAGGCTGCAGAAAACCAGGCTTGGGGAGGAAACGGTGCTGCAAACTGGATTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000623256.3 ENST00000624367.4 ENST00000624385.1 ENST00000653224.1 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 ENST00000669771.1 |
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| CDS CCA 90 bp | AGGATTGAGCTGACCACGAGATGGCAGTCTTTCCTTGCATCAGGCTaGCCGAAGCCTGCATCCCCAGACCTGTGTGCTTCTGAATCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RIELTTRWQSFLASG*PKPASPDLCASESS Trigger: GCTGGATTCAGAAGCACACAGGTCTGGGGATGCAGGCTTCGGCCAGCCTGATGCAAGGAAAGACTGCCATCTCGTGGTCAGCTCAATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000623256.3 ENST00000624367.4 ENST00000624385.1 ENST00000653224.1 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 ENST00000669771.1 |
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| CDS GCA 90 bp | AGCCAGATATTGATGTCTGCAGGATCCGTCCTTCTGCACAACCCATaGTGTCAACCAGGAGCTATTCTGTCCCCACCGACTCAACGAGGC | + |
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Preference number: 5 (lower is better) Translates to: SQILMSAGSVLLHNP*CQPGAILSPPTQRG Trigger: GCCTCGTTGAGTCGGTGGGGACAGAATAGCTCCTGGTTGACAGCATGGGTTGTGCAGAAGGACGGATCCTGCAGACATCAATATCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000623256.3 ENST00000624367.4 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000661947.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 |
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| CDS TCA 90 bp | CTACTTGCCTACCTTTGGTACAAGTCACTGTCCCTTCTCTCAGCCTaGGTGTTCTCTCTGCCAGGCACGCCGGAGGCATTTACGTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: LLAYLWYKSLSLLSA*VFSLPGTPEAFTCS Trigger: TGAACACGTAAATGCCTCCGGCGTGCCTGGCAGAGAGAACACTCAGGCTGAGAGAAGGGACAGTGACTTGTACCAAAGGTAGGCAAGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000623256.3 ENST00000653966.1 ENST00000663538.1 |
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| CDS TCA 90 bp | TCCCCACATTTCTACCTCATTTTCACGCAGCCTGCAGCGTGTGTGTaGAGCATGTGTTTGGCTCAAGGGATGACAACACACCTGCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: SPHFYLIFTQPAACV*SMCLAQGMTTHLQR Trigger: CCTCTGCAGGTGTGTTGTCATCCCTTGAGCCAAACACATGCTTCACACACACGCTGCAGGCTGCGTGAAAATGAGGTAGAAATGTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000623256.3 ENST00000653966.1 ENST00000663538.1 |
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| CDS TCA 90 bp | TCAGACCTGACTTTGTCTGAAGGGTTGACCAGATGCCCTGCTGATTaGGACCCCAGAGGCTACTTGCCTACCTTTGGTACAAGTCACTGT | + |
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Preference number: 5 (lower is better) Translates to: SDLTLSEGLTRCPAD*DPRGYLPTFGTSHC Trigger: ACAGTGACTTGTACCAAAGGTAGGCAAGTAGCCTCTGGGGTCTCAATCAGCAGGGCATCTGGTCAACCCTTCAGACAAAGTCAGGTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000623256.3 ENST00000653966.1 ENST00000663538.1 |
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| CDS TCA 90 bp | CAAGGGCCGCCAGTGATCCCAGAAATAGATAGAGGCAGCCCAAGATaGAAGACACCTTCAGGCAAGAACACACTTCTCTATCCGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: QGPPVIPEIDRGSPR*KTPSGKNTLLYPLL Trigger: GAGAAGCGGATAGAGAAGTGTGTTCTTGCCTGAAGGTGTCTTTCATCTTGGGCTGCCTCTATCTATTTCTGGGATCACTGGCGGCCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666232.1 |
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| CDS TCA 90 bp | GACTGGCTTGGCTGCTCTGGAAGAGGCTTGACAGCTTTTAAAAAGTaGAACATACACTTACTGTGTGACTCAGCAATCCCACTCCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: DWLGCSGRGLTAFKK*NIHLLCDSAIPLRG Trigger: GCCTCGGAGTGGGATTGCTGAGTCACACAGTAAGTGTATGTTTCACTTTTTAAAAGCTGTCAAGCCTCTTCCAGAGCAGCCAAGCCAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000624385.1 ENST00000663538.1 ENST00000666232.1 |
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| CDS TCA 90 bp | AGAGAAGACAAACCTTGCAGGCAGTTTCATCCTCACTGGGGGTCATaGACCTTATATGGGAAACAGCCTAAAAGTAGCATTTGGGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: REDKPCRQFHPHWGS*TLYGKQPKSSIWEG Trigger: CCCTTCCCAAATGCTACTTTTAGGCTGTTTCCCATATAAGGTTCATGACCCCCAGTGAGGATGAAACTGCCTGCAAGGTTTGTCTTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000659009.1 ENST00000669771.1 |
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| CDS CCA 90 bp | TGCTCAGAGTCGTCCAATCATTGCTACAGTCTATATCCTTTGGGTTaGCGAGTTTCTTCAGTATTGTCCATTCCATGGTTTGCCAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: CSESSNHCYSLYPLG*RVSSVLSIPWFARN Trigger: ATTTCTGGCAAACCATGGAATGGACAATACTGAAGAAACTCGCCAACCCAAAGGATATAGACTGTAGCAATGATTGGACGACTCTGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000624367.4 ENST00000668557.1 |
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| CDS CCA 90 bp | TTAGAGGAATCTGTTGGTGACTCAGGTGAGATTTTCTGGAAGACGTaGTGTCTTAGACAAGCTTCTGATAAACAAGCTCCTTTGAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: LEESVGDSGEIFWKT*CLRQASDKQAPLRS Trigger: GCTTCTCAAAGGAGCTTGTTTATCAGAAGCTTGTCTAAGACACCACGTCTTCCAGAAAATCTCACCTGAGTCACCAACAGATTCCTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653224.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000669771.1 |
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| CDS CCA 90 bp | TACAGACTCTTAGAGGAATCTGTTGGTGACTCAGGTGAGATTTTCTaGAAGACGTGGTGTCTTAGACAAGCTTCTGATAAACAAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: YRLLEESVGDSGEIF*KTWCLRQASDKQAP Trigger: AGGAGCTTGTTTATCAGAAGCTTGTCTAAGACACCACGTCTTCCAGAAAATCTCACCTGAGTCACCAACAGATTCCTCTAAGAGTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653224.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000669771.1 |
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| CDS CCA 90 bp | AAGGGGCTGCCACTTGCCAAATTTGGGATGATCTGGCTGTCAAAATaGATAGTTACAGAAATACACTGGATAGAGAAAGAAGCCTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: KGLPLAKFGMIWLSK*IVTEIHWIEKEALS Trigger: ACTCAAGGCTTCTTTCTCTATCCAGTGTATTTCTGTAACTATCCATTTTGACAGCCAGATCATCCCAAATTTGGCAAGTGGCAGCCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663538.1 |
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| CDS CCA 90 bp | CCCAAAATCAATATTCCCAGCAATTTCCTGGTCATTCAAAGACACTaGCAGAGTGGAGAGAAATTTGAGTCATCCAGTGCTAAGGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: PKINIPSNFLVIQRH*QSGEKFESSSAKEE Trigger: TTCTTCCTTAGCACTGGATGACTCAAATTTCTCTCCACTCTGCCAGTGTCTTTGAATGACCAGGAAATTGCTGGGAATATTGATTTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622928.1 |
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| CDS TCA 90 bp | CTGCTTAATGGGCATAATACAAACTCCCGTTCTGTAGAGTCATTATaGGATTATGCAAGACCATGTATGTGCCTGGCATATAGCAGGTAT | + |
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Preference number: 5 (lower is better) Translates to: LLNGHNTNSRSVESL*DYARPCMCLAYSRY Trigger: ATACCTGCTATATGCCAGGCACATACATGGTCTTGCATAATCTCATAATGACTCTACAGAACGGGAGTTTGTATTATGCCCATTAAGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653966.1 ENST00000663538.1 |
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| CDS TCA 90 bp | TGTGTGACTCAGCAATCCCACTCCGAGGCACCTACCCAAGAGAAATaGAAACTTACGTTCATGCAAGAAAACCCTATACATAAATGTTTA | + |
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Preference number: 5 (lower is better) Translates to: CVTQQSHSEAPTQEK*KLTFMQENPIHKCL Trigger: TAAACATTTATGTATAGGGTTTTCTTGCATGAACGTAAGTTTTCATTTCTCTTGGGTAGGTGCCTCGGAGTGGGATTGCTGAGTCACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663538.1 |
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| CDS GCA 90 bp | AGATTGGTTCTTCAGCCACTGCTTTTCATTCTCATACCAAACAAGTaGATTTTTAAGAACTCGCGAGAGTCTTGCTACTCTTCAACAGAG | + |
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Preference number: 5 (lower is better) Translates to: RLVLQPLLFILIPNK*IFKNSRESCYSSTE Trigger: CTCTGTTGAAGAGTAGCAAGACTCTCGCGAGTTCTTAAAAATGCACTTGTTTGGTATGAGAATGAAAAGCAGTGGCTGAAGAACCAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 17 transcripts: ENST00000622928.1 ENST00000623256.3 ENST00000624367.4 ENST00000653224.1 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000661947.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 ENST00000669771.1 |
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| CDS TCA 90 bp | CCTTTATTTATGGACCTGGAAAGACGCTTCTGTCATAGTGTTGAATaGAAAAGTAGGTTATGGGATAGAGGAGTACAAGGTCTGATTGCA | + |
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Preference number: 5 (lower is better) Translates to: PLFMDLERRFCHSVE*KSRLWDRGVQGLIA Trigger: TGCAATCAGACCTTGTACTCCTCTATCCCATAACCTACTTTTTCATTCAACACTATGACAGAAGCGTCTTTCCAGGTCCATAAATAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653966.1 ENST00000663538.1 |
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| CDS CCA 90 bp | ATTGTCTTTAAAGCAAAATTAGGAATGCCTTTGTTCTCCAGATATTaGGATATCTGGACACTCCCAAGTCTGGGTGTGTTTAGTAAATGT | + |
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Preference number: 5 (lower is better) Translates to: IVFKAKLGMPLFSRY*DIWTLPSLGVFSKC Trigger: ACATTTACTAAACACACCCAGACTTGGGAGTGTCCAGATATCCCAATATCTGGAGAACAAAGGCATTCCTAATTTTGCTTTAAAGACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654700.1 ENST00000661947.1 ENST00000665084.1 ENST00000668638.1 |
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| CDS CCA 90 bp | AAAGCAAAATTAGGAATGCCTTTGTTCTCCAGATATTGGGATATCTaGACACTCCCAAGTCTGGGTGTGTTTAGTAAATGTTATAAATTT | + |
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Preference number: 5 (lower is better) Translates to: KAKLGMPLFSRYWDI*TLPSLGVFSKCYKF Trigger: AAATTTATAACATTTACTAAACACACCCAGACTTGGGAGTGTCCAGATATCCCAATATCTGGAGAACAAAGGCATTCCTAATTTTGCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654700.1 ENST00000661947.1 ENST00000665084.1 ENST00000668638.1 |
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| CDS CCA 90 bp | TGTAACTTGATGATTTGGAGTTGTTCTGTATCTCAATTACAGTGGTaGCTTCACAAACCTATACCTATATTAAGATTCCTACAACTACAC | + |
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Preference number: 5 (lower is better) Translates to: CNLMIWSCSVSQLQW*LHKPIPILRFLQLH Trigger: GTGTAGTTGTAGGAATCTTAATATAGGTATAGGTTTGTGAAGCCACCACTGTAATTGAGATACAGAACAACTCCAAATCATCAAGTTACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663538.1 |
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| CDS CAA 90 bp | CTCGTGCCAGAGAGCAGAGAGGGGCTCAGAGGACACAGGTCCAGCTaGAAGGGGCTGCCACTTGCCAAATTTGGGATGATCTGGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LVPESREGLRGHRSS*KGLPLAKFGMIWLS Trigger: TGACAGCCAGATCATCCCAAATTTGGCAAGTGGCAGCCCCTTCAAGCTGGACCTGTGTCCTCTGAGCCCCTCTCTGCTCTCTGGCACGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663538.1 |
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| CDS TCA 72 bp | GCAGCCTGGTCCCTCACCAAGGTGCCAGGATTGAGCTaGCCACGAGATGGCAGTCTTTCCTTGCATCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: AAWSLTKVPGLS*PRDGSLSLHQA Trigger: AGCCTGATGCAAGGAAAGACTGCCATCTCGTGGTCAGCTCAATCCTGGCACCTTGGTGAGGGACCAGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000623256.3 ENST00000624367.4 ENST00000624385.1 ENST00000653224.1 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 ENST00000669771.1 |
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| CDS GCA 72 bp | GTTTGCAGCACCGTTTCCTCCCCAAGCCTGGTTTTCTaGAGCCTGGTCCCTCACCAAGGTGCCAGGATTGAG | + |
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Preference number: 6 (lower is better) Translates to: VCSTVSSPSLVF*SLVPHQGARIE Trigger: CTCAATCCTGGCACCTTGGTGAGGGACCAGGCTGCAGAAAACCAGGCTTGGGGAGGAAACGGTGCTGCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000623256.3 ENST00000624367.4 ENST00000624385.1 ENST00000653224.1 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 ENST00000669771.1 |
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| CDS CCA 72 bp | CTGACCACGAGATGGCAGTCTTTCCTTGCATCAGGCTaGCCGAAGCCTGCATCCCCAGACCTGTGTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LTTRWQSFLASG*PKPASPDLCAS Trigger: AGAAGCACACAGGTCTGGGGATGCAGGCTTCGGCCAGCCTGATGCAAGGAAAGACTGCCATCTCGTGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000623256.3 ENST00000624367.4 ENST00000624385.1 ENST00000653224.1 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 ENST00000669771.1 |
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| CDS CCA 72 bp | CCTTGCCTTTCACTAAGAGGGGCCTCTAACCCACTCTaGCTTGGGAGAGACTCTAACTCCCCCAGTTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PCLSLRGASNPL*LGRDSNSPSWA Trigger: GGCCCAACTGGGGGAGTTAGAGTCTCTCCCAAGCCAGAGTGGGTTAGAGGCCCCTCTTAGTGAAAGGCAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000624367.4 ENST00000668557.1 |
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| CDS CCA 72 bp | GAAATCCAGTTTGCAGCACCGTTTCCTCCCCAAGCCTaGTTTTCTGCAGCCTGGTCCCTCACCAAGGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: EIQFAAPFPPQA*FSAAWSLTKVP Trigger: TGGCACCTTGGTGAGGGACCAGGCTGCAGAAAACCAGGCTTGGGGAGGAAACGGTGCTGCAAACTGGATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000623256.3 ENST00000624367.4 ENST00000624385.1 ENST00000653224.1 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 ENST00000669771.1 |
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| CDS TCA 72 bp | TTTCTGCAGCCTGGTCCCTCACCAAGGTGCCAGGATTaGGCTGACCACGAGATGGCAGTCTTTCCTTGCATC | + |
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Preference number: 6 (lower is better) Translates to: FLQPGPSPRCQD*ADHEMAVFPCI Trigger: GATGCAAGGAAAGACTGCCATCTCGTGGTCAGCTCAATCCTGGCACCTTGGTGAGGGACCAGGCTGCAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000623256.3 ENST00000624367.4 ENST00000624385.1 ENST00000653224.1 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 ENST00000669771.1 |
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| CDS GCA 72 bp | TGGCAAGGACGCAGAGCAACTGGAACTCTCAGAAATTaGTGGTGGAAACGCAGACTGGCTTGGCTGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: WQGRRATGTLRN*WWKRRLAWLLW Trigger: CCAGAGCAGCCAAGCCAGTCTGCGTTTCCACCAGCAATTTCTGAGAGTTCCAGTTGCTCTGCGTCCTTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624385.1 ENST00000663538.1 ENST00000666232.1 |
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| CDS GCA 72 bp | AGTATTGACAAGGTCGTGGGGCACTGGAAATTCTCCTaGGCAGCTGTTGGGAGTGTGAGCTGGCACATGCTG | + |
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Preference number: 6 (lower is better) Translates to: SIDKVVGHWKFS*AAVGSVSWHML Trigger: CAGCATGTGCCAGCTCACACTCCCAACAGCTGCGCAGGAGAATTTCCAGTGCCCCACGACCTTGTCAATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653966.1 ENST00000663538.1 |
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| CDS CCA 72 bp | GGACGCAGAGCAACTGGAACTCTCAGAAATTGCTGGTaGAAACGCAGACTGGCTTGGCTGCTCTGGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GRRATGTLRNCW*KRRLAWLLWKR Trigger: CCTCTTCCAGAGCAGCCAAGCCAGTCTGCGTTTCCACCAGCAATTTCTGAGAGTTCCAGTTGCTCTGCGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624385.1 ENST00000663538.1 ENST00000666232.1 |
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| CDS CAA 72 bp | CTGGCAAGGACGCAGAGCAACTGGAACTCTCAGAAATaGCTGGTGGAAACGCAGACTGGCTTGGCTGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LARTQSNWNSQK*LVETQTGLAAL Trigger: CAGAGCAGCCAAGCCAGTCTGCGTTTCCACCAGCAATTTCTGAGAGTTCCAGTTGCTCTGCGTCCTTGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624385.1 ENST00000663538.1 ENST00000666232.1 |
||
| CDS GCA 72 bp | CCAGATGCCCTGCTGATTGAGACCCCAGAGGCTACTTaGCTACCTTTGGTACAAGTCACTGTCCCTTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PDALLIETPEAT*LPLVQVTVPSL Trigger: GAGAGAAGGGACAGTGACTTGTACCAAAGGTAGGCAAGTAGCCTCTGGGGTCTCAATCAGCAGGGCATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000623256.3 ENST00000653966.1 ENST00000663538.1 |
||
| CDS CCA 72 bp | CAAGGACGCAGAGCAACTGGAACTCTCAGAAATTGCTaGTGGAAACGCAGACTGGCTTGGCTGCTCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QGRRATGTLRNC*WKRRLAWLLWK Trigger: CTTCCAGAGCAGCCAAGCCAGTCTGCGTTTCCACCAGCAATTTCTGAGAGTTCCAGTTGCTCTGCGTCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624385.1 ENST00000663538.1 ENST00000666232.1 |
||
| CDS TCA 72 bp | CTGGCCGAAGCCTGCATCCCCAGACCTGTGTGCTTCTaGATCCAGCTTCCATCCTTCTCCTCTTCAACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LAEACIPRPVCF*IQLPSFSSSTK Trigger: TTTTGTTGAAGAGGAGAAGGATGGAAGCTGGATTCAGAAGCACACAGGTCTGGGGATGCAGGCTTCGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655574.1 |
||
| CDS GCA 72 bp | TTCACATTTATAATGGCCCTAGGCATCGTGCTACAGTaGTGGCTAGAGTTCCCAGGCACGAGAGGCTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: FTFIMALGIVLQ*WLEFPGTRGCE Trigger: CTCACAGCCTCTCGTGCCTGGGAACTCTAGCCAGCACTGTAGCACGATGCCTAGGGCCATTATAAATGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622928.1 |
||
| CDS TCA 72 bp | ACTTTGTCTGAAGGGTTGACCAGATGCCCTGCTGATTaGGACCCCAGAGGCTACTTGCCTACCTTTGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: TLSEGLTRCPAD*DPRGYLPTFGT Trigger: TGTACCAAAGGTAGGCAAGTAGCCTCTGGGGTCTCAATCAGCAGGGCATCTGGTCAACCCTTCAGACAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000623256.3 ENST00000653966.1 ENST00000663538.1 |
||
| CDS GCA 72 bp | ATAGGGGTGGTCATATTCCTGCCTATTAGGGTCTCTTaGATCAGGGTAGAGAGAAGCTCAGTCCCAGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: IGVVIFLPIRVS*IRVERSSVPEW Trigger: CCACTCTGGGACTGAGCTTCTCTCTACCCTGATGCAAGAGACCCTAATAGGCAGGAATATGACCACCCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654700.1 ENST00000661947.1 ENST00000665084.1 ENST00000668638.1 |
||
| CDS GCA 72 bp | CAGAGGACACAGGTCCAGCTTGAAGGGGCTGCCACTTaGCAAATTTGGGATGATCTGGCTGTCAAAATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QRTQVQLEGAAT*QIWDDLAVKMD Trigger: ATCCATTTTGACAGCCAGATCATCCCAAATTTGGCAAGTGGCAGCCCCTTCAAGCTGGACCTGTGTCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663538.1 |
||
| CDS CCA 72 bp | CTGGAACTCTCAGAAATTGCTGGTGGAAACGCAGACTaGCTTGGCTGCTCTGGAAGAGGCTTGACAGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LELSEIAGGNAD*LGCSGRGLTAF Trigger: AAAAGCTGTCAAGCCTCTTCCAGAGCAGCCAAGCCAGTCTGCGTTTCCACCAGCAATTTCTGAGAGTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624385.1 ENST00000663538.1 ENST00000666232.1 |
||
| CDS CCA 72 bp | TGGCAATACCAAGCACTGGCAAGGACGCAGAGCAACTaGAACTCTCAGAAATTGCTGGTGGAAACGCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: WQYQALARTQSN*NSQKLLVETQT Trigger: AGTCTGCGTTTCCACCAGCAATTTCTGAGAGTTCCAGTTGCTCTGCGTCCTTGCCAGTGCTTGGTATTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624385.1 ENST00000663538.1 ENST00000666232.1 |
||
| CDS CCA 72 bp | TGCATCAGGGTAGAGAGAAGCTCAGTCCCAGAGTGGTaGTATGGTGAAGGTCATTACCAACTCCAAGTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: CIRVERSSVPEW*YGEGHYQLQVP Trigger: CGGAACTTGGAGTTGGTAATGACCTTCACCATACCACCACTCTGGGACTGAGCTTCTCTCTACCCTGATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654700.1 ENST00000661947.1 ENST00000665084.1 ENST00000668638.1 |
||
| CDS TCA 72 bp | GGTAGAGAGAAGCTCAGTCCCAGAGTGGTGGTATGGTaGAGGTCATTACCAACTCCAAGTTCCGACAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GREKLSPRVVVW*RSLPTPSSDKR Trigger: CCTTTTGTCGGAACTTGGAGTTGGTAATGACCTTCACCATACCACCACTCTGGGACTGAGCTTCTCTCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654700.1 ENST00000661947.1 ENST00000665084.1 ENST00000668638.1 |
||
| CDS CAA 72 bp | GTCCTGATCCAGGCCCCAAGAGAGGGTTTTCGGATATaGCACATGAAAGAATTCAGGGCAAGTCCATCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VLIQAPREGFRI*HMKEFRASPSF Trigger: GAAGGATGGACTTGCCCTGAATTCTTTCATGTGCAATATCCGAAAACCCTCTCTTGGGGCCTGGATCAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661947.1 |
||
| CDS TCA 72 bp | ACAAGCTCCTTTGAGAAGCCCATGAATCAGCCTGGCTaGGTAACCAGTGAACAGGAGAGAAGACAAACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TSSFEKPMNQPG*VTSEQERRQTL Trigger: CAAGGTTTGTCTTCTCTCCTGTTCACTGGTTACTCAGCCAGGCTGATTCATGGGCTTCTCAAAGGAGCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653224.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000669771.1 |
||
| CDS TCA 72 bp | TCCAGGCCCCAAGAGAGGGTTTTCGGATATTGCACATaGAAGAATTCAGGGCAAGTCCATCCTTCTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SRPQERVFGYCT*KNSGQVHPSPL Trigger: AAGAGGAGAAGGATGGACTTGCCCTGAATTCTTTCATGTGCAATATCCGAAAACCCTCTCTTGGGGCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661947.1 |
||
| CDS CCA 72 bp | CCAGTTCTGTACATGAAGATTCCAAGGGATCCCAAATaGCACGTGTTAGAACAGACACAGAGAAGGCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PVLYMKIPRDPK*HVLEQTQRRLA Trigger: GGCAAGCCTTCTCTGTGTCTGTTCTAACACGTGCCATTTGGGATCCCTTGGAATCTTCATGTACAGAACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000623256.3 ENST00000624367.4 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000661947.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 |
||
| CDS CCA 72 bp | CAGGTCCAGCTTGAAGGGGCTGCCACTTGCCAAATTTaGGATGATCTGGCTGTCAAAATGGATAGTTACAGA | + |
|
Preference number: 6 (lower is better) Translates to: QVQLEGAATCQI*DDLAVKMDSYR Trigger: TCTGTAACTATCCATTTTGACAGCCAGATCATCCCAAATTTGGCAAGTGGCAGCCCCTTCAAGCTGGACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663538.1 |
||
| CDS CAA 90 bp | CAGCTTCTGTGCCATCCTTCTCCTCTTCAACAAAAGTCACAACAGTaGTGTGTCCATTTGCAGTCTGGGGTAGAATTAGAATTGCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: QLLCHPSPLQQKSQQ*CVHLQSGVELELPS Trigger: GCTTGGCAATTCTAATTCTACCCCAGACTGCAAATGGACACACAACTGTTGTGACTTTTGTTGAAGAGGAGAAGGATGGCACAGAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000623256.3 ENST00000655015.1 ENST00000668557.1 ENST00000668638.1 |
||
| CDS CAA 90 bp | CACATGCTCACCCATCCTTCTCCTCTTCAACAAAAGTCACAACAGTaGTGTGTCCATTTGCAGTCTGGGGTAGAATTAGAATTGCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HMLTHPSPLQQKSQQ*CVHLQSGVELELPS Trigger: GCTTGGCAATTCTAATTCTACCCCAGACTGCAAATGGACACACAACTGTTGTGACTTTTGTTGAAGAGGAGAAGGATGGGTGAGCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000654700.1 ENST00000659009.1 ENST00000663538.1 ENST00000666232.1 ENST00000668797.1 |
||
| CDS CAA 90 bp | TCAGGGCAAGTCCATCCTTCTCCTCTTCAACAAAAGTCACAACAGTaGTGTGTCCATTTGCAGTCTGGGGTAGAATTAGAATTGCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGQVHPSPLQQKSQQ*CVHLQSGVELELPS Trigger: GCTTGGCAATTCTAATTCTACCCCAGACTGCAAATGGACACACAACTGTTGTGACTTTTGTTGAAGAGGAGAAGGATGGACTTGCCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661947.1 |
||
| CDS GCA 72 bp | TGGGTAGAAAGTGACAGGGGTCTAGTCTCATTCTTCTaGACATGGATAGCCAGTTTTCCCAGCACCATTTAT | + |
|
Preference number: 6 (lower is better) Translates to: WVESDRGLVSFF*TWIASFPSTIY Trigger: ATAAATGGTGCTGGGAAAACTGGCTATCCATGTGCAGAAGAATGAGACTAGACCCCTGTCACTTTCTACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666232.1 |
||
| CDS CAA 90 bp | GAATCCAGCTTCCATCCTTCTCCTCTTCAACAAAAGTCACAACAGTaGTGTGTCCATTTGCAGTCTGGGGTAGAATTAGAATTGCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ESSFHPSPLQQKSQQ*CVHLQSGVELELPS Trigger: GCTTGGCAATTCTAATTCTACCCCAGACTGCAAATGGACACACAACTGTTGTGACTTTTGTTGAAGAGGAGAAGGATGGAAGCTGGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655574.1 |
||
| CDS TCA 72 bp | CTGTGCTGCCCGAAGCAATTTCAGCAAAGAGATTATTaGCTAAAGAGACCTTCACCATCCTTCTCCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LCCPKQFQQRDY*LKRPSPSFSSS Trigger: TGAAGAGGAGAAGGATGGTGAAGGTCTCTTTAGTCAATAATCTCTTTGCTGAAATTGCTTCGGGCAGCACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000624367.4 ENST00000624385.1 ENST00000653224.1 ENST00000653966.1 ENST00000665084.1 ENST00000669771.1 |
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| CDS TCA 72 bp | TATGAAGACAGAGATAAGGTCAGCAGCTGTCAGGGATaGAGGATGTGTTTGACCACAAACAGGAAGCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: YEDRDKVSSCQG*RMCLTTNRKHK Trigger: TTTGTGCTTCCTGTTTGTGGTCAAACACATCCTTCATCCCTGACAGCTGCTGACCTTATCTCTGTCTTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663538.1 |
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| CDS TCA 72 bp | CAGCAATCCCACTCCGAGGCACCTACCCAAGAGAAATaGAAACTTACGTTCATGCAAGAAAACCCTATACAT | + |
|
Preference number: 6 (lower is better) Translates to: QQSHSEAPTQEK*KLTFMQENPIH Trigger: ATGTATAGGGTTTTCTTGCATGAACGTAAGTTTTCATTTCTCTTGGGTAGGTGCCTCGGAGTGGGATTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663538.1 |
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| CDS TCA 72 bp | AAACCTTGCAGGCAGTTTCATCCTCACTGGGGGTCATaGACCTTATATGGGAAACAGCCTAAAAGTAGCATT | + |
|
Preference number: 6 (lower is better) Translates to: KPCRQFHPHWGS*TLYGKQPKSSI Trigger: AATGCTACTTTTAGGCTGTTTCCCATATAAGGTTCATGACCCCCAGTGAGGATGAAACTGCCTGCAAGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000659009.1 ENST00000669771.1 |
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| CDS CCA 72 bp | ACAAAAGTCACAACAGTTGTGTGTCCATTTGCAGTCTaGGGTAGAATTAGAATTGCCAAGCATCCCAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TKVTTVVCPFAV*GRIRIAKHPSE Trigger: CTCACTGGGATGCTTGGCAATTCTAATTCTACCCCAGACTGCAAATGGACACACAACTGTTGTGACTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000623256.3 ENST00000624367.4 ENST00000624385.1 ENST00000653224.1 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000661947.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 ENST00000669771.1 |
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| CDS CCA 72 bp | TCTGTTGGTGACTCAGGTGAGATTTTCTGGAAGACGTaGTGTCTTAGACAAGCTTCTGATAAACAAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SVGDSGEIFWKT*CLRQASDKQAP Trigger: AGGAGCTTGTTTATCAGAAGCTTGTCTAAGACACCACGTCTTCCAGAAAATCTCACCTGAGTCACCAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653224.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000669771.1 |
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| CDS CCA 72 bp | TTGAAGGGGCTGCCACTTGCCAAATTTGGGATGATCTaGCTGTCAAAATGGATAGTTACAGAAATACACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LKGLPLAKFGMI*LSKWIVTEIHW Trigger: CCAGTGTATTTCTGTAACTATCCATTTTGACAGCCAGATCATCCCAAATTTGGCAAGTGGCAGCCCCTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663538.1 |
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| CDS CAA 90 bp | TCACAACAGTTGTGTGTCCATTTGCAGTCTGGGGTAGAATTAGAATaGCCAAGCATCCCAGTGAGGTCTGAATCCACATTCCTTTATTTC | + |
|
Preference number: 6 (lower is better) Translates to: SQQLCVHLQSGVELE*PSIPVRSESTFLYF Trigger: GAAATAAAGGAATGTGGATTCAGACCTCACTGGGATGCTTGGCAATTCTAATTCTACCCCAGACTGCAAATGGACACACAACTGTTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000623256.3 ENST00000624367.4 ENST00000624385.1 ENST00000653224.1 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000661947.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 ENST00000669771.1 |
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| CDS CAA 90 bp | TTGCTCAGAGTCGTCCAATCATTGCTACAGTCTATATCCTTTGGGTaGGCGAGTTTCTTCAGTATTGTCCATTCCATGGTTTGCCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLRVVQSLLQSISFG*ASFFSIVHSMVCQK Trigger: TTTCTGGCAAACCATGGAATGGACAATACTGAAGAAACTCGCCAACCCAAAGGATATAGACTGTAGCAATGATTGGACGACTCTGAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000624367.4 ENST00000668557.1 |
||
| CDS TCA 72 bp | ATTGGCCACCTAAGCGTTAATAATGGGTCCCTAAGGTaGGGACGCTTCCAGTCTTTTATTTCCTTCTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: IGHLSVNNGSLR*GRFQSFISFFV Trigger: TACAAAGAAGGAAATAAAAGACTGGAAGCGTCCTCACCTTAGGGACCCATTATTAACGCTTAGGTGGCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653966.1 ENST00000663538.1 |
||
| CDS CCA 72 bp | AATATTCCCAGCAATTTCCTGGTCATTCAAAGACACTaGCAGAGTGGAGAGAAATTTGAGTCATCCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: NIPSNFLVIQRH*QSGEKFESSSA Trigger: AGCACTGGATGACTCAAATTTCTCTCCACTCTGCCAGTGTCTTTGAATGACCAGGAAATTGCTGGGAATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622928.1 |
||
| CDS CAA 72 bp | CACCATCCTTCTCCTCTTCAACAAAAGTCACAACAGTaGTGTGTCCATTTGCAGTCTGGGGTAGAATTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: HHPSPLQQKSQQ*CVHLQSGVELE Trigger: TTCTAATTCTACCCCAGACTGCAAATGGACACACAACTGTTGTGACTTTTGTTGAAGAGGAGAAGGATGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000624367.4 ENST00000624385.1 ENST00000653224.1 ENST00000653966.1 ENST00000665084.1 ENST00000669771.1 |
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| CDS CAA 72 bp | TGGTCATTCAAAGACACTGGCAGAGTGGAGAGAAATTaGAGTCATCCAGTGCTAAGGAAGAACAAGATGACA | + |
|
Preference number: 6 (lower is better) Translates to: WSFKDTGRVERN*SHPVLRKNKMT Trigger: TGTCATCTTGTTCTTCCTTAGCACTGGATGACTCAAATTTCTCTCCACTCTGCCAGTGTCTTTGAATGACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622928.1 |
||
| CDS CAA 72 bp | TGCCATCCTTCTCCTCTTCAACAAAAGTCACAACAGTaGTGTGTCCATTTGCAGTCTGGGGTAGAATTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: CHPSPLQQKSQQ*CVHLQSGVELE Trigger: TTCTAATTCTACCCCAGACTGCAAATGGACACACAACTGTTGTGACTTTTGTTGAAGAGGAGAAGGATGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000623256.3 ENST00000655015.1 ENST00000668557.1 ENST00000668638.1 |
||
| CDS CAA 72 bp | ACCCATCCTTCTCCTCTTCAACAAAAGTCACAACAGTaGTGTGTCCATTTGCAGTCTGGGGTAGAATTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: THPSPLQQKSQQ*CVHLQSGVELE Trigger: TTCTAATTCTACCCCAGACTGCAAATGGACACACAACTGTTGTGACTTTTGTTGAAGAGGAGAAGGATGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000654700.1 ENST00000659009.1 ENST00000663538.1 ENST00000666232.1 ENST00000668797.1 |
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| CDS CAA 72 bp | GTCCATCCTTCTCCTCTTCAACAAAAGTCACAACAGTaGTGTGTCCATTTGCAGTCTGGGGTAGAATTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VHPSPLQQKSQQ*CVHLQSGVELE Trigger: TTCTAATTCTACCCCAGACTGCAAATGGACACACAACTGTTGTGACTTTTGTTGAAGAGGAGAAGGATGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661947.1 |
||
| CDS TCA 72 bp | ATGGACCTGGAAAGACGCTTCTGTCATAGTGTTGAATaGAAAAGTAGGTTATGGGATAGAGGAGTACAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: MDLERRFCHSVE*KSRLWDRGVQG Trigger: ACCTTGTACTCCTCTATCCCATAACCTACTTTTTCATTCAACACTATGACAGAAGCGTCTTTCCAGGTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653966.1 ENST00000663538.1 |
||
| CDS TCA 72 bp | GGGCATAATACAAACTCCCGTTCTGTAGAGTCATTATaGGATTATGCAAGACCATGTATGTGCCTGGCATAT | + |
|
Preference number: 6 (lower is better) Translates to: GHNTNSRSVESL*DYARPCMCLAY Trigger: ATATGCCAGGCACATACATGGTCTTGCATAATCTCATAATGACTCTACAGAACGGGAGTTTGTATTATGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653966.1 ENST00000663538.1 |
||
| CDS GCA 72 bp | CTTCAGCCACTGCTTTTCATTCTCATACCAAACAAGTaGATTTTTAAGAACTCGCGAGAGTCTTGCTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: LQPLLFILIPNK*IFKNSRESCYS Trigger: AGAGTAGCAAGACTCTCGCGAGTTCTTAAAAATGCACTTGTTTGGTATGAGAATGAAAAGCAGTGGCTGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 17 transcripts: ENST00000622928.1 ENST00000623256.3 ENST00000624367.4 ENST00000653224.1 ENST00000653966.1 ENST00000654700.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000661947.1 ENST00000663538.1 ENST00000665084.1 ENST00000666232.1 ENST00000668557.1 ENST00000668638.1 ENST00000668797.1 ENST00000669771.1 |
||
| CDS CCA 72 bp | TCGTCCAATCATTGCTACAGTCTATATCCTTTGGGTTaGCGAGTTTCTTCAGTATTGTCCATTCCATGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSNHCYSLYPLG*RVSSVLSIPWF Trigger: AAACCATGGAATGGACAATACTGAAGAAACTCGCCAACCCAAAGGATATAGACTGTAGCAATGATTGGACGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000624367.4 ENST00000668557.1 |
||
| CDS CCA 72 bp | TTAGAGGAATCTGTTGGTGACTCAGGTGAGATTTTCTaGAAGACGTGGTGTCTTAGACAAGCTTCTGATAAA | + |
|
Preference number: 6 (lower is better) Translates to: LEESVGDSGEIF*KTWCLRQASDK Trigger: TTTATCAGAAGCTTGTCTAAGACACCACGTCTTCCAGAAAATCTCACCTGAGTCACCAACAGATTCCTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653224.1 ENST00000655015.1 ENST00000655574.1 ENST00000659009.1 ENST00000669771.1 |
||
| CDS CCA 72 bp | TTAGGAATGCCTTTGTTCTCCAGATATTGGGATATCTaGACACTCCCAAGTCTGGGTGTGTTTAGTAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: LGMPLFSRYWDI*TLPSLGVFSKC Trigger: ACATTTACTAAACACACCCAGACTTGGGAGTGTCCAGATATCCCAATATCTGGAGAACAAAGGCATTCCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654700.1 ENST00000661947.1 ENST00000665084.1 ENST00000668638.1 |
||
| CDS CCA 72 bp | AAAGCAAAATTAGGAATGCCTTTGTTCTCCAGATATTaGGATATCTGGACACTCCCAAGTCTGGGTGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: KAKLGMPLFSRY*DIWTLPSLGVF Trigger: AAACACACCCAGACTTGGGAGTGTCCAGATATCCCAATATCTGGAGAACAAAGGCATTCCTAATTTTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654700.1 ENST00000661947.1 ENST00000665084.1 ENST00000668638.1 |
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| CDS CCA 72 bp | CCATTTGTCTTAATGGGTAAATGGATAAGCAAACCGTaGTTCATCCACATGATGGAATATCTACCACTCAGC | + |
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Preference number: 6 (lower is better) Translates to: PFVLMGKWISKP*FIHMMEYLPLS Trigger: GCTGAGTGGTAGATATTCCATCATGTGGATGAACCACGGTTTGCTTATCCATTTACCCATTAAGACAAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663538.1 |
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| CDS CAA 72 bp | TTCCATCCTTCTCCTCTTCAACAAAAGTCACAACAGTaGTGTGTCCATTTGCAGTCTGGGGTAGAATTAGAA | + |
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Preference number: 6 (lower is better) Translates to: FHPSPLQQKSQQ*CVHLQSGVELE Trigger: TTCTAATTCTACCCCAGACTGCAAATGGACACACAACTGTTGTGACTTTTGTTGAAGAGGAGAAGGATGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655574.1 |
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| CDS CAA 72 bp | GACATCCTACTTTCTGGTTCCAGTTCTCATACTTGTTaGCAGTCAAACAAGCATCCTTTTTGTGGTCTATTT | + |
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Preference number: 6 (lower is better) Translates to: DILLSGSSSHTC*QSNKHPFCGLF Trigger: AAATAGACCACAAAAAGGATGCTTGTTTGACTGCAAACAAGTATGAGAACTGGAACCAGAAAGTAGGATGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000622928.1 |
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| CDS CAA 72 bp | ACACACTTCTCTATCCGCTTCTCTCTCTGTTTAAAATaGAGCCCTTCTGACTTTCCTAATAATAAAAATGCA | + |
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Preference number: 6 (lower is better) Translates to: THFSIRFSLCLK*SPSDFPNNKNA Trigger: TGCATTTTTATTATTAGGAAAGTCAGAAGGGCTCAATTTTAAACAGAGAGAGAAGCGGATAGAGAAGTGTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000624385.1 ENST00000666232.1 |
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| CDS CAA 72 bp | AATATTATTGTCTTTAAAGCAAAATTAGGAATGCCTTaGTTCTCCAGATATTGGGATATCTGGACACTCCCA | + |
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Preference number: 6 (lower is better) Translates to: NIIVFKAKLGMP*FSRYWDIWTLP Trigger: TGGGAGTGTCCAGATATCCCAATATCTGGAGAACAAAGGCATTCCTAATTTTGCTTTAAAGACAATAATATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654700.1 ENST00000661947.1 ENST00000665084.1 ENST00000668638.1 |
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