Pregenerated sensors for LINC01723 (Homo sapiens)
Ensembl gene IDs: ENSG00000234265Ensembl transcript IDs: ENST00000432244.1, ENST00000654168.1, ENST00000655843.1, ENST00000658457.1, ENST00000658737.1, ENST00000660733.1, ENST00000660848.1, ENST00000661302.1, ENST00000664230.1, ENST00000666864.1, ENST00000668019.1, ENST00000669657.1, ENST00000669978.1, ENST00000670547.1, ENST00000671262.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAAGAAGGTGGGACATCTGGCTCCACTGGACAGATGGAGGTGAGATaGTTGAGAGGGAAGCAAGGGTGGAGGGAGTCAACGGCTGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: QEGGTSGSTGQMEVR*LRGKQGWRESTAAA Trigger: AGCGGCAGCCGTTGACTCCCTCCACCCTTGCTTCCCTCTCAACCATCTCACCTCCATCTGTCCAGTGGAGCCAGATGTCCCACCTTCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000432244.1 ENST00000654168.1 ENST00000655843.1 ENST00000658457.1 ENST00000658737.1 ENST00000660733.1 ENST00000660848.1 ENST00000661302.1 ENST00000664230.1 ENST00000666864.1 ENST00000668019.1 ENST00000669657.1 ENST00000669978.1 ENST00000670547.1 ENST00000671262.1 |
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| CDS TCA 90 bp | AACTCTGATGCAGCTCTGAGATGCTCCTCCCCCGTTCCCTGGCCATaGGATGCTTGTGCCCCACACCTTCCATGTCCAAATGCCCAGATG | + |
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Preference number: 5 (lower is better) Translates to: NSDAALRCSSPVPWP*DACAPHLPCPNAQM Trigger: CATCTGGGCATTTGGACATGGAAGGTGTGGGGCACAAGCATCTCATGGCCAGGGAACGGGGGAGGAGCATCTCAGAGCTGCATCAGAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENST00000654168.1 ENST00000655843.1 ENST00000658457.1 ENST00000658737.1 ENST00000660733.1 ENST00000661302.1 ENST00000664230.1 ENST00000666864.1 ENST00000668019.1 ENST00000669657.1 ENST00000669978.1 ENST00000670547.1 ENST00000671262.1 |
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| CDS CCA 90 bp | AGCAAGGGTGGAGGGAGTCAACGGCTGCCGCTGGGTGTGTCTCTCTaGATCAGAGACCACTTGAGAAGAAATTCCGGTGACGGAATCACA | + |
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Preference number: 5 (lower is better) Translates to: SKGGGSQRLPLGVSL*IRDHLRRNSGDGIT Trigger: TGTGATTCCGTCACCGGAATTTCTTCTCAAGTGGTCTCTGATCCAGAGAGACACACCCAGCGGCAGCCGTTGACTCCCTCCACCCTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660848.1 |
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| CDS GCA 90 bp | CTGCACACCCGGCAGCCTTGTGGTGAGAACAAAGGAGATGCTGTGTaGCTAAGTCCTTTGCAAACTGCATTCACAGGACGCCTCTTGATC | + |
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Preference number: 5 (lower is better) Translates to: LHTRQPCGENKGDAV*LSPLQTAFTGRLLI Trigger: GATCAAGAGGCGTCCTGTGAATGCAGTTTGCAAAGGACTTAGGCACACAGCATCTCCTTTGTTCTCACCACAAGGCTGCCGGGTGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000654168.1 ENST00000655843.1 ENST00000658457.1 ENST00000658737.1 ENST00000660733.1 ENST00000661302.1 ENST00000664230.1 ENST00000666864.1 ENST00000668019.1 ENST00000669657.1 ENST00000669978.1 ENST00000670547.1 ENST00000671262.1 |
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| CDS GCA 90 bp | GAGCAAGGACCAATGGTGGAGATCCGTGTACACCCACACTTGGAATaGAGTTCCCTGGGTGGTGTCACAGAAAGGAGCCAGTTTGGGTTA | + |
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Preference number: 5 (lower is better) Translates to: EQGPMVEIRVHPHLE*SSLGGVTERSQFGL Trigger: TAACCCAAACTGGCTCCTTTCTGTGACACCACCCAGGGAACTGCATTCCAAGTGTGGGTGTACACGGATCTCCACCATTGGTCCTTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658457.1 |
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| CDS CCA 90 bp | AGAGAGAGCAAGGACCAATGGTGGAGATCCGTGTACACCCACACTTaGAATGCAGTTCCCTGGGTGGTGTCACAGAAAGGAGCCAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: RESKDQWWRSVYTHT*NAVPWVVSQKGASL Trigger: CAAACTGGCTCCTTTCTGTGACACCACCCAGGGAACTGCATTCCAAGTGTGGGTGTACACGGATCTCCACCATTGGTCCTTGCTCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658457.1 |
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| CDS CCA 90 bp | CAATGGTGGAGATCCGTGTACACCCACACTTGGAATGCAGTTCCCTaGGTGGTGTCACAGAAAGGAGCCAGTTTGGGTTATCCTGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: QWWRSVYTHTWNAVP*VVSQKGASLGYPVK Trigger: TTTCACAGGATAACCCAAACTGGCTCCTTTCTGTGACACCACCCAGGGAACTGCATTCCAAGTGTGGGTGTACACGGATCTCCACCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658457.1 |
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| CDS TCA 90 bp | AGCAAGAGTTCATGGCAAAGATGCCTTCTCATCTCTAAAGCCACGTaGTGGGAATCCCTCATAAGGCTGGGGGTGCCTGGGAAAAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: SKSSWQRCLLISKAT*WESLIRLGVPGKRK Trigger: TTTCCTTTTCCCAGGCACCCCCAGCCTTATGAGGGATTCCCATCACGTGGCTTTAGAGATGAGAAGGCATCTTTGCCATGAACTCTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658457.1 |
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| CDS GCA 90 bp | CATGAGATGCTTGTGCCCCACACCTTCCATGTCCAAATGCCCAGATaGTCTCCTGCTCTTGGTGTGACATTAGTTGAACTACGTAACCTC | + |
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Preference number: 5 (lower is better) Translates to: HEMLVPHTFHVQMPR*SPALGVTLVELRNL Trigger: GAGGTTACGTAGTTCAACTAATGTCACACCAAGAGCAGGAGAGCATCTGGGCATTTGGACATGGAAGGTGTGGGGCACAAGCATCTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000654168.1 ENST00000658457.1 ENST00000658737.1 ENST00000660733.1 ENST00000661302.1 ENST00000668019.1 ENST00000669657.1 ENST00000670547.1 ENST00000671262.1 |
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| CDS GCA 90 bp | GCCTGTTTCTTGGGCTTCTGCATAGACTCTAAGGAAGGAAGACTCTaGAGGTGGCCACTTTTAATATGGCGATGGGCAATGGTGCTCCTA | + |
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Preference number: 5 (lower is better) Translates to: ACFLGFCIDSKEGRL*RWPLLIWRWAMVLL Trigger: TAGGAGCACCATTGCCCATCGCCATATTAAAAGTGGCCACCTGCAGAGTCTTCCTTCCTTAGAGTCTATGCAGAAGCCCAAGAAACAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666864.1 |
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| CDS CCA 90 bp | TTCTTGGGCTTCTGCATAGACTCTAAGGAAGGAAGACTCTGCAGGTaGCCACTTTTAATATGGCGATGGGCAATGGTGCTCCTACAGTGG | + |
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Preference number: 5 (lower is better) Translates to: FLGFCIDSKEGRLCR*PLLIWRWAMVLLQW Trigger: CCACTGTAGGAGCACCATTGCCCATCGCCATATTAAAAGTGGCCACCTGCAGAGTCTTCCTTCCTTAGAGTCTATGCAGAAGCCCAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666864.1 |
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| CDS TCA 90 bp | ACCATTGAAATAATCCTCACATCTGCACACCCGGCAGCCTTGTGGTaGGAACAAAGGAGATGCTGTGTGCCTAAGTCCTTTGCAAACTGC | + |
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Preference number: 5 (lower is better) Translates to: TIEIILTSAHPAALW*EQRRCCVPKSFANC Trigger: GCAGTTTGCAAAGGACTTAGGCACACAGCATCTCCTTTGTTCTCACCACAAGGCTGCCGGGTGTGCAGATGTGAGGATTATTTCAATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000654168.1 ENST00000655843.1 ENST00000658457.1 ENST00000658737.1 ENST00000660733.1 ENST00000661302.1 ENST00000664230.1 ENST00000666864.1 ENST00000668019.1 ENST00000669657.1 ENST00000669978.1 ENST00000670547.1 ENST00000671262.1 |
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| CDS GCA 90 bp | CATGAGATGCTTGTGCCCCACACCTTCCATGTCCAAATGCCCAGATaGTCTCCTCTTGGTGTGACATTAGTTGAACTACGTAACCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: HEMLVPHTFHVQMPR*SPLGVTLVELRNLS Trigger: TGAGAGGTTACGTAGTTCAACTAATGTCACACCAAGAGGAGAGCATCTGGGCATTTGGACATGGAAGGTGTGGGGCACAAGCATCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655843.1 ENST00000664230.1 ENST00000666864.1 ENST00000669978.1 |
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| CDS GCA 90 bp | TGCAAATCTGTCTTGAGAAATGAAAGGCAGAACACGTCCATCCTCTaGAGCTTTGTATTTCTAGAGCTTTTGTGCCCTGCTGGGGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: CKSVLRNERQNTSIL*SFVFLELLCPAGGS Trigger: GGAGCCCCCAGCAGGGCACAAAAGCTCTAGAAATACAAAGCTGCAGAGGATGGACGTGTTCTGCCTTTCATTTCTCAAGACAGATTTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658737.1 |
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| CDS TCA 90 bp | ACTGACGCAGGTGTGAGGTGGTTGATGACTGCAGGGTCCCAGTCCTaGAACACATCTGGTTTACTCACTAACTCTTATTCTCTCAATGCA | + |
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Preference number: 5 (lower is better) Translates to: TDAGVRWLMTAGSQS*NTSGLLTNSYSLNA Trigger: TGCATTGAGAGAATAAGAGTTAGTGAGTAAACCAGATGTGTTTCAGGACTGGGACCCTGCAGTCATCAACCACCTCACACCTGCGTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000669657.1 ENST00000670547.1 ENST00000671262.1 |
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| CDS CCA 90 bp | TACAGCAAAGAAGACCCCTCCTGTCTAGGACCACTAAGAGAGGAGTaGTTGGATATGCAGTGGAAGAAAGAAAAGCTCAGTGGGATAGGA | + |
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Preference number: 5 (lower is better) Translates to: YSKEDPSCLGPLREE*LDMQWKKEKLSGIG Trigger: TCCTATCCCACTGAGCTTTTCTTTCTTCCACTGCATATCCAACCACTCCTCTCTTAGTGGTCCTAGACAGGAGGGGTCTTCTTTGCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666864.1 |
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| CDS TCA 90 bp | CCAGGTTGGACTAAGCATTGTGGGAGTCTGATGAGCAATACGGGATaGGCTCTGTTCTCTTTAGGGTTTCATACACTGAGTGAAAGCTAC | + |
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Preference number: 5 (lower is better) Translates to: PGWTKHCGSLMSNTG*ALFSLGFHTLSESY Trigger: GTAGCTTTCACTCAGTGTATGAAACCCTAAAGAGAACAGAGCTCATCCCGTATTGCTCATCAGACTCCCACAATGCTTAGTCCAACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670547.1 |
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| CDS TCA 90 bp | AAAGGAAGGAAGGCAGATATTGGAGGGAGTGAACATGTCAGTTCTTaGAGTTCTTACCCCCAGGAATGTGGCAGGTTAAGTTCATCCAGA | + |
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Preference number: 5 (lower is better) Translates to: KGRKADIGGSEHVSS*SSYPQECGRLSSSR Trigger: TCTGGATGAACTTAACCTGCCACATTCCTGGGGGTAAGAACTTCAAGAACTGACATGTTCACTCCCTCCAATATCTGCCTTCCTTCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666864.1 |
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| CDS TCA 90 bp | CATATCCAAAGTCAGAAAAGGAAGGAAGGCAGATATTGGAGGGAGTaGACATGTCAGTTCTTGAAGTTCTTACCCCCAGGAATGTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: HIQSQKRKEGRYWRE*TCQFLKFLPPGMWQ Trigger: CTGCCACATTCCTGGGGGTAAGAACTTCAAGAACTGACATGTTCACTCCCTCCAATATCTGCCTTCCTTCCTTTTCTGACTTTGGATATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666864.1 |
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| CDS GCA 90 bp | AGATTTTCTAAGGTTCCTGTAGGCCCCATTGAGCAGACTAAGAGTTaGACCTACAGGCTGAGATCACAGGCTTTCTTCTACAGCAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: RFSKVPVGPIEQTKS*TYRLRSQAFFYSKE Trigger: TTCTTTGCTGTAGAAGAAAGCCTGTGATCTCAGCCTGTAGGTGCAACTCTTAGTCTGCTCAATGGGGCCTACAGGAACCTTAGAAAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666864.1 |
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| CDS TCA 90 bp | CAAACTGCATTCACAGGACGCCTCTTGATCATTGCAAATCTGTCTTaGGAAATGAAAGGCAGAACACGTCCATCCTCTGCAGCTTTGTAT | + |
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Preference number: 5 (lower is better) Translates to: QTAFTGRLLIIANLS*EMKGRTRPSSAALY Trigger: ATACAAAGCTGCAGAGGATGGACGTGTTCTGCCTTTCATTTCTCAAGACAGATTTGCAATGATCAAGAGGCGTCCTGTGAATGCAGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658737.1 |
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| CDS TCA 90 bp | TCAAGGCTTTGTTTCTTCCTACCATCATCAAATGGCATGGTGACATaGTTTGCTGGAGAGTCATTACAACCTGTTGAGTCTTCCCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: SRLCFFLPSSNGMVT*FAGESLQPVESSQV Trigger: GACTTGGGAAGACTCAACAGGTTGTAATGACTCTCCAGCAAATCATGTCACCATGCCATTTGATGATGGTAGGAAGAAACAAAGCCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000669657.1 ENST00000670547.1 ENST00000671262.1 |
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| CDS CCA 90 bp | AAGAGAGGAGTGGTTGGATATGCAGTGGAAGAAAGAAAAGCTCAGTaGGATAGGATAGGCTATAATACAATAAAGATGAGAGCCAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: KRGVVGYAVEERKAQ*DRIGYNTIKMRAKP Trigger: AGGCTTGGCTCTCATCTTTATTGTATTATAGCCTATCCTATCCCACTGAGCTTTTCTTTCTTCCACTGCATATCCAACCACTCCTCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666864.1 |
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| CDS GCA 72 bp | GTTGAGAGGGAAGCAAGGGTGGAGGGAGTCAACGGCTaGCGCTGGGTGTGTCTCTCTGGATCAGAGACCACT | + |
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Preference number: 6 (lower is better) Translates to: VEREARVEGVNG*RWVCLSGSETT Trigger: AGTGGTCTCTGATCCAGAGAGACACACCCAGCGGCAGCCGTTGACTCCCTCCACCCTTGCTTCCCTCTCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660848.1 |
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| CDS CAA 90 bp | TGCAGCTCTGAGATGCTCCTCCCCCGTTCCCTGGCCATGAGATGCTaGTGCCCCACACCTTCCATGTCCAAATGCCCAGATGCTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: CSSEMLLPRSLAMRC*CPTPSMSKCPDALL Trigger: CAGGAGAGCATCTGGGCATTTGGACATGGAAGGTGTGGGGCACAAGCATCTCATGGCCAGGGAACGGGGGAGGAGCATCTCAGAGCTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000654168.1 ENST00000658457.1 ENST00000658737.1 ENST00000660733.1 ENST00000661302.1 ENST00000668019.1 ENST00000669657.1 ENST00000670547.1 ENST00000671262.1 |
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| CDS TCA 72 bp | GCAGCTCTGAGATGCTCCTCCCCCGTTCCCTGGCCATaGGATGCTTGTGCCCCACACCTTCCATGTCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: AALRCSSPVPWP*DACAPHLPCPN Trigger: ATTTGGACATGGAAGGTGTGGGGCACAAGCATCTCATGGCCAGGGAACGGGGGAGGAGCATCTCAGAGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENST00000654168.1 ENST00000655843.1 ENST00000658457.1 ENST00000658737.1 ENST00000660733.1 ENST00000661302.1 ENST00000664230.1 ENST00000666864.1 ENST00000668019.1 ENST00000669657.1 ENST00000669978.1 ENST00000670547.1 ENST00000671262.1 |
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| CDS GCA 72 bp | TCTGAGATGCTCCTCCCCCGTTCCCTGGCCATGAGATaGTTGTGCCCCACACCTTCCATGTCCAAATGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SEMLLPRSLAMR*LCPTPSMSKCP Trigger: TGGGCATTTGGACATGGAAGGTGTGGGGCACAAGCATCTCATGGCCAGGGAACGGGGGAGGAGCATCTCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENST00000654168.1 ENST00000655843.1 ENST00000658457.1 ENST00000658737.1 ENST00000660733.1 ENST00000661302.1 ENST00000664230.1 ENST00000666864.1 ENST00000668019.1 ENST00000669657.1 ENST00000669978.1 ENST00000670547.1 ENST00000671262.1 |
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| CDS CAA 72 bp | GAGATGCTCCTCCCCCGTTCCCTGGCCATGAGATGCTaGTGCCCCACACCTTCCATGTCCAAATGCCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: EMLLPRSLAMRC*CPTPSMSKCPD Trigger: ATCTGGGCATTTGGACATGGAAGGTGTGGGGCACAAGCATCTCATGGCCAGGGAACGGGGGAGGAGCATCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENST00000654168.1 ENST00000655843.1 ENST00000658457.1 ENST00000658737.1 ENST00000660733.1 ENST00000661302.1 ENST00000664230.1 ENST00000666864.1 ENST00000668019.1 ENST00000669657.1 ENST00000669978.1 ENST00000670547.1 ENST00000671262.1 |
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| CDS CCA 72 bp | GGAGGGAGTCAACGGCTGCCGCTGGGTGTGTCTCTCTaGATCAGAGACCACTTGAGAAGAAATTCCGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: GGSQRLPLGVSL*IRDHLRRNSGD Trigger: GTCACCGGAATTTCTTCTCAAGTGGTCTCTGATCCAGAGAGACACACCCAGCGGCAGCCGTTGACTCCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660848.1 |
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| CDS TCA 72 bp | TCATGGCAAAGATGCCTTCTCATCTCTAAAGCCACGTaGTGGGAATCCCTCATAAGGCTGGGGGTGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SWQRCLLISKAT*WESLIRLGVPG Trigger: CCCAGGCACCCCCAGCCTTATGAGGGATTCCCATCACGTGGCTTTAGAGATGAGAAGGCATCTTTGCCATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658457.1 |
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| CDS CCA 72 bp | CCGTGTACACCCACACTTGGAATGCAGTTCCCTGGGTaGTGTCACAGAAAGGAGCCAGTTTGGGTTATCCTG | + |
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Preference number: 6 (lower is better) Translates to: PCTPTLGMQFPG*CHRKEPVWVIL Trigger: CAGGATAACCCAAACTGGCTCCTTTCTGTGACACCACCCAGGGAACTGCATTCCAAGTGTGGGTGTACACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658457.1 |
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| CDS CAA 72 bp | CAAGGACCAATGGTGGAGATCCGTGTACACCCACACTaGGAATGCAGTTCCCTGGGTGGTGTCACAGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: QGPMVEIRVHPH*ECSSLGGVTER Trigger: CCTTTCTGTGACACCACCCAGGGAACTGCATTCCAAGTGTGGGTGTACACGGATCTCCACCATTGGTCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658457.1 |
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| CDS CAA 90 bp | GAGAGAGAGCAAGGACCAATGGTGGAGATCCGTGTACACCCACACTaGGAATGCAGTTCCCTGGGTGGTGTCACAGAAAGGAGCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: EREQGPMVEIRVHPH*ECSSLGGVTERSQF Trigger: AAACTGGCTCCTTTCTGTGACACCACCCAGGGAACTGCATTCCAAGTGTGGGTGTACACGGATCTCCACCATTGGTCCTTGCTCTCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658457.1 |
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| CDS GCA 72 bp | CAGATTACTGGGGCTGCAGCCTGTTTCTTGGGCTTCTaGATAGACTCTAAGGAAGGAAGACTCTGCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: QITGAAACFLGF*IDSKEGRLCRW Trigger: CCACCTGCAGAGTCTTCCTTCCTTAGAGTCTATGCAGAAGCCCAAGAAACAGGCTGCAGCCCCAGTAATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666864.1 |
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| CDS CCA 72 bp | AAGGACCAATGGTGGAGATCCGTGTACACCCACACTTaGAATGCAGTTCCCTGGGTGGTGTCACAGAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: KDQWWRSVYTHT*NAVPWVVSQKG Trigger: TCCTTTCTGTGACACCACCCAGGGAACTGCATTCCAAGTGTGGGTGTACACGGATCTCCACCATTGGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658457.1 |
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| CDS CCA 72 bp | GAGAAAGGATGGGACAGGAGAGAGAGCAAGGACCAATaGTGGAGATCCGTGTACACCCACACTTGGAATGCA | + |
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Preference number: 6 (lower is better) Translates to: EKGWDRRESKDQ*WRSVYTHTWNA Trigger: TGCATTCCAAGTGTGGGTGTACACGGATCTCCACCATTGGTCCTTGCTCTCTCTCCTGTCCCATCCTTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658457.1 |
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| CDS CAA 72 bp | CTAAGTCCTTTGCAAACTGCATTCACAGGACGCCTCTaGATCATTGCAAATCTGGGGGCTCCAGGCCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LSPLQTAFTGRL*IIANLGAPGLP Trigger: AGGGAGGCCTGGAGCCCCCAGATTTGCAATGATCAAGAGGCGTCCTGTGAATGCAGTTTGCAAAGGACTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000664230.1 ENST00000668019.1 |
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| CDS CCA 72 bp | AGATCCGTGTACACCCACACTTGGAATGCAGTTCCCTaGGTGGTGTCACAGAAAGGAGCCAGTTTGGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: RSVYTHTWNAVP*VVSQKGASLGY Trigger: ATAACCCAAACTGGCTCCTTTCTGTGACACCACCCAGGGAACTGCATTCCAAGTGTGGGTGTACACGGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658457.1 |
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| CDS CCA 72 bp | AAAGGATGGGACAGGAGAGAGAGCAAGGACCAATGGTaGAGATCCGTGTACACCCACACTTGGAATGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: KGWDRRESKDQW*RSVYTHTWNAV Trigger: AACTGCATTCCAAGTGTGGGTGTACACGGATCTCCACCATTGGTCCTTGCTCTCTCTCCTGTCCCATCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658457.1 |
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| CDS CCA 72 bp | AAGGAAGGAAGACTCTGCAGGTGGCCACTTTTAATATaGCGATGGGCAATGGTGCTCCTACAGTGGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: KEGRLCRWPLLI*RWAMVLLQWPK Trigger: CTTTGGCCACTGTAGGAGCACCATTGCCCATCGCCATATTAAAAGTGGCCACCTGCAGAGTCTTCCTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666864.1 |
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| CDS CAA 72 bp | CTAAGTCCTTTGCAAACTGCATTCACAGGACGCCTCTaGATCATTGCAAATCTGTCTGGGGGCTCCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LSPLQTAFTGRL*IIANLSGGSRP Trigger: AGGCCTGGAGCCCCCAGACAGATTTGCAATGATCAAGAGGCGTCCTGTGAATGCAGTTTGCAAAGGACTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655843.1 ENST00000658457.1 ENST00000660733.1 |
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| CDS TCA 72 bp | ATAATCCTCACATCTGCACACCCGGCAGCCTTGTGGTaGGAACAAAGGAGATGCTGTGTGCCTAAGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: IILTSAHPAALW*EQRRCCVPKSF Trigger: AAAGGACTTAGGCACACAGCATCTCCTTTGTTCTCACCACAAGGCTGCCGGGTGTGCAGATGTGAGGATTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000654168.1 ENST00000655843.1 ENST00000658457.1 ENST00000658737.1 ENST00000660733.1 ENST00000661302.1 ENST00000664230.1 ENST00000666864.1 ENST00000668019.1 ENST00000669657.1 ENST00000669978.1 ENST00000670547.1 ENST00000671262.1 |
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| CDS GCA 72 bp | CTTGTGCCCCACACCTTCCATGTCCAAATGCCCAGATaGTCTCCTGCTCTTGGTGTGACATTAGTTGAACTA | + |
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Preference number: 6 (lower is better) Translates to: LVPHTFHVQMPR*SPALGVTLVEL Trigger: TAGTTCAACTAATGTCACACCAAGAGCAGGAGAGCATCTGGGCATTTGGACATGGAAGGTGTGGGGCACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000654168.1 ENST00000658457.1 ENST00000658737.1 ENST00000660733.1 ENST00000661302.1 ENST00000668019.1 ENST00000669657.1 ENST00000670547.1 ENST00000671262.1 |
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| CDS GCA 72 bp | CTTGTGCCCCACACCTTCCATGTCCAAATGCCCAGATaGTCTCCTCTTGGTGTGACATTAGTTGAACTACGT | + |
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Preference number: 6 (lower is better) Translates to: LVPHTFHVQMPR*SPLGVTLVELR Trigger: ACGTAGTTCAACTAATGTCACACCAAGAGGAGAGCATCTGGGCATTTGGACATGGAAGGTGTGGGGCACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655843.1 ENST00000664230.1 ENST00000666864.1 ENST00000669978.1 |
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| CDS GCA 72 bp | AAGGTTCCTGTAGGCCCCATTGAGCAGACTAAGAGTTaGACCTACAGGCTGAGATCACAGGCTTTCTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: KVPVGPIEQTKS*TYRLRSQAFFY Trigger: GTAGAAGAAAGCCTGTGATCTCAGCCTGTAGGTGCAACTCTTAGTCTGCTCAATGGGGCCTACAGGAACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666864.1 |
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| CDS CAA 72 bp | GCAGTTCCCTGGGTGGTGTCACAGAAAGGAGCCAGTTaGGGTTATCCTGTGAAATCTTCACTGAAGATGGCT | + |
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Preference number: 6 (lower is better) Translates to: AVPWVVSQKGAS*GYPVKSSLKMA Trigger: AGCCATCTTCAGTGAAGATTTCACAGGATAACCCAAACTGGCTCCTTTCTGTGACACCACCCAGGGAACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658457.1 |
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| CDS CAA 90 bp | ACTTGGAATGCAGTTCCCTGGGTGGTGTCACAGAAAGGAGCCAGTTaGGGTTATCCTGTGAAATCTTCACTGAAGATGGCTGAGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: TWNAVPWVVSQKGAS*GYPVKSSLKMAENR Trigger: CCTGTTCTCAGCCATCTTCAGTGAAGATTTCACAGGATAACCCAAACTGGCTCCTTTCTGTGACACCACCCAGGGAACTGCATTCCAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658457.1 |
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| CDS GCA 72 bp | TTGGGCTTCTGCATAGACTCTAAGGAAGGAAGACTCTaGAGGTGGCCACTTTTAATATGGCGATGGGCAATG | + |
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Preference number: 6 (lower is better) Translates to: LGFCIDSKEGRL*RWPLLIWRWAM Trigger: CATTGCCCATCGCCATATTAAAAGTGGCCACCTGCAGAGTCTTCCTTCCTTAGAGTCTATGCAGAAGCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666864.1 |
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| CDS CCA 72 bp | TTCTGCATAGACTCTAAGGAAGGAAGACTCTGCAGGTaGCCACTTTTAATATGGCGATGGGCAATGGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: FCIDSKEGRLCR*PLLIWRWAMVL Trigger: GAGCACCATTGCCCATCGCCATATTAAAAGTGGCCACCTGCAGAGTCTTCCTTCCTTAGAGTCTATGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666864.1 |
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| CDS CCA 72 bp | GAAGACCCCTCCTGTCTAGGACCACTAAGAGAGGAGTaGTTGGATATGCAGTGGAAGAAAGAAAAGCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: EDPSCLGPLREE*LDMQWKKEKLS Trigger: ACTGAGCTTTTCTTTCTTCCACTGCATATCCAACCACTCCTCTCTTAGTGGTCCTAGACAGGAGGGGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666864.1 |
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| CDS CAA 90 bp | CAGCCTTGTGGTGAGAACAAAGGAGATGCTGTGTGCCTAAGTCCTTaGCAAACTGCATTCACAGGACGCCTCTTGATCATTGCAAATCTG | + |
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Preference number: 6 (lower is better) Translates to: QPCGENKGDAVCLSP*QTAFTGRLLIIANL Trigger: CAGATTTGCAATGATCAAGAGGCGTCCTGTGAATGCAGTTTGCAAAGGACTTAGGCACACAGCATCTCCTTTGTTCTCACCACAAGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000654168.1 ENST00000655843.1 ENST00000658457.1 ENST00000658737.1 ENST00000660733.1 ENST00000664230.1 ENST00000668019.1 ENST00000669657.1 ENST00000669978.1 ENST00000670547.1 |
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| CDS CAA 90 bp | CAGCCTTGTGGTGAGAACAAAGGAGATGCTGTGTGCCTAAGTCCTTaGCAAACTGCATTCACAGGACGCCTCTTGATCATTGCAAATCCT | + |
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Preference number: 6 (lower is better) Translates to: QPCGENKGDAVCLSP*QTAFTGRLLIIANP Trigger: AGGATTTGCAATGATCAAGAGGCGTCCTGTGAATGCAGTTTGCAAAGGACTTAGGCACACAGCATCTCCTTTGTTCTCACCACAAGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000661302.1 ENST00000666864.1 ENST00000671262.1 |
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| CDS TCA 72 bp | GGTGTGAGGTGGTTGATGACTGCAGGGTCCCAGTCCTaGAACACATCTGGTTTACTCACTAACTCTTATTCT | + |
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Preference number: 6 (lower is better) Translates to: GVRWLMTAGSQS*NTSGLLTNSYS Trigger: AGAATAAGAGTTAGTGAGTAAACCAGATGTGTTTCAGGACTGGGACCCTGCAGTCATCAACCACCTCACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000669657.1 ENST00000670547.1 ENST00000671262.1 |
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| CDS GCA 72 bp | CAAAGGAGATGCTGTGTGCCTAAGTCCTTTGCAAACTaGATTCACAGGACGCCTCTTGATCATTGCAAATCC | + |
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Preference number: 6 (lower is better) Translates to: QRRCCVPKSFAN*IHRTPLDHCKS Trigger: GGATTTGCAATGATCAAGAGGCGTCCTGTGAATGCAGTTTGCAAAGGACTTAGGCACACAGCATCTCCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000661302.1 ENST00000666864.1 ENST00000671262.1 |
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| CDS CAA 72 bp | GGTGAGAACAAAGGAGATGCTGTGTGCCTAAGTCCTTaGCAAACTGCATTCACAGGACGCCTCTTGATCATT | + |
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Preference number: 6 (lower is better) Translates to: GENKGDAVCLSP*QTAFTGRLLII Trigger: AATGATCAAGAGGCGTCCTGTGAATGCAGTTTGCAAAGGACTTAGGCACACAGCATCTCCTTTGTTCTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000654168.1 ENST00000655843.1 ENST00000658457.1 ENST00000658737.1 ENST00000660733.1 ENST00000661302.1 ENST00000664230.1 ENST00000666864.1 ENST00000668019.1 ENST00000669657.1 ENST00000669978.1 ENST00000670547.1 ENST00000671262.1 |
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| CDS TCA 72 bp | TTCACAGGACGCCTCTTGATCATTGCAAATCTGTCTTaGGAAATGAAAGGCAGAACACGTCCATCCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: FTGRLLIIANLS*EMKGRTRPSSA Trigger: TGCAGAGGATGGACGTGTTCTGCCTTTCATTTCTCAAGACAGATTTGCAATGATCAAGAGGCGTCCTGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658737.1 |
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| CDS TCA 72 bp | AAGGCAGATATTGGAGGGAGTGAACATGTCAGTTCTTaGAGTTCTTACCCCCAGGAATGTGGCAGGTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: KADIGGSEHVSS*SSYPQECGRLS Trigger: ACTTAACCTGCCACATTCCTGGGGGTAAGAACTTCAAGAACTGACATGTTCACTCCCTCCAATATCTGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666864.1 |
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| CDS GCA 72 bp | CAAAGGAGATGCTGTGTGCCTAAGTCCTTTGCAAACTaGATTCACAGGACGCCTCTTGATCATTGCAAATCT | + |
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Preference number: 6 (lower is better) Translates to: QRRCCVPKSFAN*IHRTPLDHCKS Trigger: AGATTTGCAATGATCAAGAGGCGTCCTGTGAATGCAGTTTGCAAAGGACTTAGGCACACAGCATCTCCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000654168.1 ENST00000655843.1 ENST00000658457.1 ENST00000658737.1 ENST00000660733.1 ENST00000664230.1 ENST00000668019.1 ENST00000669657.1 ENST00000669978.1 ENST00000670547.1 |
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| CDS TCA 72 bp | ACTAAGCATTGTGGGAGTCTGATGAGCAATACGGGATaGGCTCTGTTCTCTTTAGGGTTTCATACACTGAGT | + |
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Preference number: 6 (lower is better) Translates to: TKHCGSLMSNTG*ALFSLGFHTLS Trigger: ACTCAGTGTATGAAACCCTAAAGAGAACAGAGCTCATCCCGTATTGCTCATCAGACTCCCACAATGCTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670547.1 |
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| CDS CAA 72 bp | CTAAGTCCTTTGCAAACTGCATTCACAGGACGCCTCTaGATCATTGCAAATCTGTCCTTTGAGATGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LSPLQTAFTGRL*IIANLSFEMSR Trigger: TCTGCTCATCTCAAAGGACAGATTTGCAATGATCAAGAGGCGTCCTGTGAATGCAGTTTGCAAAGGACTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654168.1 ENST00000669978.1 ENST00000670547.1 |
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| CDS CAA 72 bp | CTAAGTCCTTTGCAAACTGCATTCACAGGACGCCTCTaGATCATTGCAAATCTGTATATGTCATCAGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: LSPLQTAFTGRL*IIANLYMSSAN Trigger: GTTTGCTGATGACATATACAGATTTGCAATGATCAAGAGGCGTCCTGTGAATGCAGTTTGCAAAGGACTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669657.1 |
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| CDS CCA 72 bp | ATCTTCAAGGCTTTGTTTCTTCCTACCATCATCAAATaGCATGGTGACATGATTTGCTGGAGAGTCATTACA | + |
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Preference number: 6 (lower is better) Translates to: IFKALFLPTIIK*HGDMICWRVIT Trigger: TGTAATGACTCTCCAGCAAATCATGTCACCATGCCATTTGATGATGGTAGGAAGAAACAAAGCCTTGAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000669657.1 ENST00000670547.1 ENST00000671262.1 |
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