Pregenerated sensors for LINC01722 (Homo sapiens)
Ensembl gene IDs: ENSG00000233048Ensembl transcript IDs: ENST00000456265.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGAAAAGCCCAGACCCTAGTCCCTCCGCAGCATGTAGACAATGACTaGAGGCAGCTTGGGAACAGTGTGCTCTCAGCTCAGATGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: RKAQTLVPPQHVDND*RQLGNSVLSAQMLQ Trigger: CTGCAGCATCTGAGCTGAGAGCACACTGTTCCCAAGCTGCCTCCAGTCATTGTCTACATGCTGCGGAGGGACTAGGGTCTGGGCTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS CCA 90 bp | TTTTTCCAGATCACCTGTTGTGTTTGCTATCAGGTCATTCACCCTTaGTTGCTATGCAGCTTCCCCCTGCCAGGTGTCAGGAACTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: FFQITCCVCYQVIHP*LLCSFPLPGVRNSA Trigger: AGCAGAGTTCCTGACACCTGGCAGGGGGAAGCTGCATAGCAACCAAGGGTGAATGACCTGATAGCAAACACAACAGGTGATCTGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS TCA 90 bp | AGCTTGGGAACAGTGTGCTCTCAGCTCAGATGCTGCAGGAGATCTTaGAGGTGCTACAGTAGGCTGTTAGCTATTTGCATTCCTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: SLGTVCSQLRCCRRS*RCYSRLLAICIPFS Trigger: GCTGAAAGGAATGCAAATAGCTAACAGCCTACTGTAGCACCTTCAAGATCTCCTGCAGCATCTGAGCTGAGAGCACACTGTTCCCAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS TCA 90 bp | CTTGCGACCCACATACAGCTCACTAGGGTGGTTTTAAAGATTAAATaGGACAACATGCAGACTGCTTGTTCCTATGCATTCAAAGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: LATHIQLTRVVLKIK*DNMQTACSYAFKGS Trigger: ACTTCCTTTGAATGCATAGGAACAAGCAGTCTGCATGTTGTCTCATTTAATCTTTAAAACCACCCTAGTGAGCTGTATGTGGGTCGCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS TCA 90 bp | TTCTTCTACCAAATATTAGGCAGCTTCTGTTACATTCTGGACACTTaGTCTCGTAGTCAAGGTATCAGTTTGGAGATGGTGTTTGAAATG | + |
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Preference number: 5 (lower is better) Translates to: FFYQILGSFCYILDT*SRSQGISLEMVFEM Trigger: CATTTCAAACACCATCTCCAAACTGATACCTTGACTACGAGATCAAGTGTCCAGAATGTAACAGAAGCTGCCTAATATTTGGTAGAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS CCA 72 bp | CAGACCCTAGTCCCTCCGCAGCATGTAGACAATGACTaGAGGCAGCTTGGGAACAGTGTGCTCTCAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: QTLVPPQHVDND*RQLGNSVLSAQ Trigger: CTGAGCTGAGAGCACACTGTTCCCAAGCTGCCTCCAGTCATTGTCTACATGCTGCGGAGGGACTAGGGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS TCA 72 bp | ATAACACAGAAAGAGGCTACAACTGTGATGCAGCTCTaGGAAAGTCTTAGGCATCGCAGTGGGGAGCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: ITQKEATTVMQL*ESLRHRSGELQ Trigger: TTGGAGCTCCCCACTGCGATGCCTAAGACTTTCTCAGAGCTGCATCACAGTTGTAGCCTCTTTCTGTGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS CAA 90 bp | CTGCCATTTGCTCACTGTGACCCTGGCCATCACTTGGCTTCCACCTaGGAAACACTGAGATTGTTCTATAGTTCAACAGTTCTCCACCAA | + |
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Preference number: 6 (lower is better) Translates to: LPFAHCDPGHHLAST*ETLRLFYSSTVLHQ Trigger: TTGGTGGAGAACTGTTGAACTATAGAACAATCTCAGTGTTTCCAAGGTGGAAGCCAAGTGATGGCCAGGGTCACAGTGAGCAAATGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS TCA 72 bp | ACAGTGTGCTCTCAGCTCAGATGCTGCAGGAGATCTTaGAGGTGCTACAGTAGGCTGTTAGCTATTTGCATT | + |
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Preference number: 6 (lower is better) Translates to: TVCSQLRCCRRS*RCYSRLLAICI Trigger: AATGCAAATAGCTAACAGCCTACTGTAGCACCTTCAAGATCTCCTGCAGCATCTGAGCTGAGAGCACACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS CCA 72 bp | CATGACCCCTGTGGGATATGTTTTACCATCTTCATTTaGAGGCCTAGAGCAGTTCAATTACTTGCGACCCAC | + |
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Preference number: 6 (lower is better) Translates to: HDPCGICFTIFI*RPRAVQLLATH Trigger: GTGGGTCGCAAGTAATTGAACTGCTCTAGGCCTCCAAATGAAGATGGTAAAACATATCCCACAGGGGTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS CCA 72 bp | TGGTTAACACCCAGGCTCTACACTCAGCCCGCTGTGTaGCTTTGGGAAAATGACTTAAATCTTCATCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: WLTPRLYTQPAV*LWENDLNLHLL Trigger: AAGGAGATGAAGATTTAAGTCATTTTCCCAAAGCCACACAGCGGGCTGAGTGTAGAGCCTGGGTGTTAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS CAA 72 bp | GCTCACTGTGACCCTGGCCATCACTTGGCTTCCACCTaGGAAACACTGAGATTGTTCTATAGTTCAACAGTT | + |
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Preference number: 6 (lower is better) Translates to: AHCDPGHHLAST*ETLRLFYSSTV Trigger: AACTGTTGAACTATAGAACAATCTCAGTGTTTCCAAGGTGGAAGCCAAGTGATGGCCAGGGTCACAGTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS GCA 72 bp | AGGACAGAGGGGCAAGCTGGGTCATTTCAATCTCGCTaGTTGTTATTGGTCTGTTCAGGGTATCTAATTCTT | + |
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Preference number: 6 (lower is better) Translates to: RTEGQAGSFQSR*LLLVCSGYLIL Trigger: AAGAATTAGATACCCTGAACAGACCAATAACAAGCAGCGAGATTGAAATGACCCAGCTTGCCCCTCTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS CAA 72 bp | ACAGAGGGGCAAGCTGGGTCATTTCAATCTCGCTGCTaGTTATTGGTCTGTTCAGGGTATCTAATTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: TEGQAGSFQSRC*LLVCSGYLILP Trigger: AGGAAGAATTAGATACCCTGAACAGACCAATAACAAGCAGCGAGATTGAAATGACCCAGCTTGCCCCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS CAA 72 bp | CTCCCAATAAGTGTTTTTCCAGATCACCTGTTGTGTTaGCTATCAGGTCATTCACCCTTGGTTGCTATGCAG | + |
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Preference number: 6 (lower is better) Translates to: LPISVFPDHLLC*LSGHSPLVAMQ Trigger: CTGCATAGCAACCAAGGGTGAATGACCTGATAGCAAACACAACAGGTGATCTGGAAAAACACTTATTGGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS CAA 72 bp | GGCCATCACTTGGCTTCCACCTTGGAAACACTGAGATaGTTCTATAGTTCAACAGTTCTCCACCAAACTTTT | + |
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Preference number: 6 (lower is better) Translates to: GHHLASTLETLR*FYSSTVLHQTF Trigger: AAAAGTTTGGTGGAGAACTGTTGAACTATAGAACAATCTCAGTGTTTCCAAGGTGGAAGCCAAGTGATGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS CCA 72 bp | GCACTCTATAATCTTGGTTGTGGCCTAATTCCGAGATaGGGGATAATTGTGCTGTTATGTCTCTGTAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: ALYNLGCGLIPR*GIIVLLCLCKF Trigger: AAACTTACAGAGACATAACAGCACAATTATCCCCCATCTCGGAATTAGGCCACAACCAAGATTATAGAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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| CDS TCA 72 bp | CACATACAGCTCACTAGGGTGGTTTTAAAGATTAAATaGGACAACATGCAGACTGCTTGTTCCTATGCATTC | + |
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Preference number: 6 (lower is better) Translates to: HIQLTRVVLKIK*DNMQTACSYAF Trigger: GAATGCATAGGAACAAGCAGTCTGCATGTTGTCTCATTTAATCTTTAAAACCACCCTAGTGAGCTGTATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456265.1 |
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