Pregenerated sensors for LINC01721 (Homo sapiens)
Ensembl gene IDs: ENSG00000230133Ensembl transcript IDs: ENST00000457274.1, ENST00000657180.1, ENST00000664459.1, ENST00000667083.1, ENST00000669143.1
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAGGCACCATCACAGTATCCGGCTTGCCTGCCCTTCTGCCTTCCCTaGGGACGCAGGGCTCCTTCTCTCCAGAGGATGCAGCAAGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: EAPSQYPACLPFCLP*GRRAPSLQRMQQEG Trigger: GCCTTCTTGCTGCATCCTCTGGAGAGAAGGAGCCCTGCGTCCTCAGGGAAGGCAGAAGGGCAGGCAAGCCGGATACTGTGATGGTGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457274.1 ENST00000667083.1 ENST00000669143.1 |
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| CDS GCA 90 bp | CCTTCTGCCTTCCCTGAGGACGCAGGGCTCCTTCTCTCCAGAGGATaGAGCAAGAAGGCACTGCTGGTTGTCATGGAAGAGCCTGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: PSAFPEDAGLLLSRG*SKKALLVVMEEPAD Trigger: ATCAGCAGGCTCTTCCATGACAACCAGCAGTGCCTTCTTGCTGCATCCTCTGGAGAGAAGGAGCCCTGCGTCCTCAGGGAAGGCAGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457274.1 |
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| CDS GCA 90 bp | GGGAAAGAACTGGGAGCTGGGCTGCCACCTCCTCCAAACCAACACTaGTCAGTGCCAGGGAAGGGTGCAGAAAGGGGGAGTACAAATCCA | + |
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Preference number: 5 (lower is better) Translates to: GKELGAGLPPPPNQH*SVPGKGAERGSTNP Trigger: TGGATTTGTACTCCCCCTTTCTGCACCCTTCCCTGGCACTGAGCAGTGTTGGTTTGGAGGAGGTGGCAGCCCAGCTCCCAGTTCTTTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000457274.1 ENST00000667083.1 |
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| CDS CCA 90 bp | ACCTGGCTGGGATCGCCAATTTCCCTTGTTACCTTGGATTTCCCCTaGCCCCAGGGCTCAGGACGCTTGTCCATGCCTGTCCTATGGACT | + |
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Preference number: 5 (lower is better) Translates to: TWLGSPISLVTLDFP*PQGSGRLSMPVLWT Trigger: AGTCCATAGGACAGGCATGGACAAGCGTCCTGAGCCCTGGGGCCAGGGGAAATCCAAGGTAACAAGGGAAATTGGCGATCCCAGCCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000457274.1 ENST00000667083.1 ENST00000669143.1 |
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| CDS CCA 90 bp | CGCTGCCCTTCCGAAGGAAAGAACTGCTCTAGCCATGCACCTGGCTaGGATCGCCAATTTCCCTTGTTACCTTGGATTTCCCCTGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: RCPSEGKNCSSHAPG*DRQFPLLPWISPGP Trigger: GGGGCCAGGGGAAATCCAAGGTAACAAGGGAAATTGGCGATCCCAGCCAGGTGCATGGCTAGAGCAGTTCTTTCCTTCGGAAGGGCAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457274.1 ENST00000667083.1 ENST00000669143.1 |
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| CDS TCA 90 bp | CTCCAGAGGATGCAGCAAGAAGGCACTGTATCTAAAGGAGTCCAGTaGGCACTGGCCTTAGCTGCGTCCCCTCAGCCCTGGAGGGTGATT | + |
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Preference number: 5 (lower is better) Translates to: LQRMQQEGTVSKGVQ*ALALAASPQPWRVI Trigger: AATCACCCTCCAGGGCTGAGGGGACGCAGCTAAGGCCAGTGCTCACTGGACTCCTTTAGATACAGTGCCTTCTTGCTGCATCCTCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669143.1 |
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| CDS GCA 90 bp | AGGACGCAGGGCTCCTTCTCTCCAGAGGATGCAGCAAGAAGGCACTaGTGGTTGTCATGGAAGAGCCTGCTGATCACGCCTCACTATCCA | + |
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Preference number: 5 (lower is better) Translates to: RTQGSFSPEDAARRH*WLSWKSLLITPHYP Trigger: TGGATAGTGAGGCGTGATCAGCAGGCTCTTCCATGACAACCAGCAGTGCCTTCTTGCTGCATCCTCTGGAGAGAAGGAGCCCTGCGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457274.1 |
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| CDS GCA 90 bp | CCTTCTGCCTTCCCTGAGGACGCAGGGCTCCTTCTCTCCAGAGGATaGAGCAAGAAGGCACTGTATCTAAAGGAGTCCAGTGAGCACTGG | + |
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Preference number: 5 (lower is better) Translates to: PSAFPEDAGLLLSRG*SKKALYLKESSEHW Trigger: CCAGTGCTCACTGGACTCCTTTAGATACAGTGCCTTCTTGCTGCATCCTCTGGAGAGAAGGAGCCCTGCGTCCTCAGGGAAGGCAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669143.1 |
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| CDS TCA 90 bp | CCGGACACAATACTACAGAGAGTCCCTGTATCTAAAGGAGTCCAGTaGGCACTGGCCTTAGCTGCGTCCCCTCAGCCCTGGAGGGTGATT | + |
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Preference number: 5 (lower is better) Translates to: PDTILQRVPVSKGVQ*ALALAASPQPWRVI Trigger: AATCACCCTCCAGGGCTGAGGGGACGCAGCTAAGGCCAGTGCTCACTGGACTCCTTTAGATACAGGGACTCTCTGTAGTATTGTGTCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664459.1 |
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| CDS GCA 90 bp | AACTGGGAGCTGGGCTGCCACCTCCTCCAAACCAACACTGCTCAGTaGCAGGGAAGGGTGCAGAAAGGGGGAGTACAAATCCACAAAATC | + |
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Preference number: 5 (lower is better) Translates to: NWELGCHLLQTNTAQ*QGRVQKGGVQIHKI Trigger: GATTTTGTGGATTTGTACTCCCCCTTTCTGCACCCTTCCCTGGCACTGAGCAGTGTTGGTTTGGAGGAGGTGGCAGCCCAGCTCCCAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000457274.1 ENST00000667083.1 |
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| CDS TCA 90 bp | ATAGGTATAGAAAGCAGACCCGTGGTTGCCAGCTTGGGGTGGGTCTaGGAAGAGGAGCTGACTACAAGGGGCACAAGGGAACTTCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: IGIESRPVVASLGWV*EEELTTRGTRELLR Trigger: CCTCAGAAGTTCCCTTGTGCCCCTTGTAGTCAGCTCCTCTTCTCAGACCCACCCCAAGCTGGCAACCACGGGTCTGCTTTCTATACCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS GCA 90 bp | CCTTCTGCCTTCCCTGAGGACGCAGGGCTCCTTCTCTCCAGAGGATaGAGCAAGAAGGCACTGACTTTCAGGATGGATTGTACAGTTTCG | + |
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Preference number: 5 (lower is better) Translates to: PSAFPEDAGLLLSRG*SKKALTFRMDCTVS Trigger: CGAAACTGTACAATCCATCCTGAAAGTCAGTGCCTTCTTGCTGCATCCTCTGGAGAGAAGGAGCCCTGCGTCCTCAGGGAAGGCAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS CCA 90 bp | CAAGAGGTATGCTGGGTTGTCAGATCTTCTAAGAAGACACAGAAATaGGGAGCCACTGGTGGTGCTGGACACATAGCTGCCCAGGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: QEVCWVVRSSKKTQK*GATGGAGHIAAQGS Trigger: GGACCCCTGGGCAGCTATGTGTCCAGCACCACCAGTGGCTCCCCATTTCTGTGTCTTCTTAGAAGATCTGACAACCCAGCATACCTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS CCA 90 bp | TCTCGCAGGACAACCGTGCTCATTTGGGGATCACAGCTTATGTTCTaGAATGTAGGAGGCTTCAACCAGGCACAGCCAGACTTAGCTAGT | + |
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Preference number: 5 (lower is better) Translates to: SRRTTVLIWGSQLMF*NVGGFNQAQPDLAS Trigger: ACTAGCTAAGTCTGGCTGTGCCTGGTTGAAGCCTCCTACATTCCAGAACATAAGCTGTGATCCCCAAATGAGCACGGTTGTCCTGCGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS CCA 90 bp | AGCAGAACTTTACTAAAGTCCCTGGATGGAAGCCTGGCAGCACAGTaGCAGCCATTAGCTGACATTCTTCTCCAAGTCCATGGATTGGAA | + |
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Preference number: 5 (lower is better) Translates to: SRTLLKSLDGSLAAQ*QPLADILLQVHGLE Trigger: TTCCAATCCATGGACTTGGAGAAGAATGTCAGCTAATGGCTGCCACTGTGCTGCCAGGCTTCCATCCAGGGACTTTAGTAAAGTTCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS CCA 90 bp | ACCACTAGAGCAAAGTACATCTCTCGCAGGACAACCGTGCTCATTTaGGGATCACAGCTTATGTTCTGGAATGTAGGAGGCTTCAACCAG | + |
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Preference number: 5 (lower is better) Translates to: TTRAKYISRRTTVLI*GSQLMFWNVGGFNQ Trigger: CTGGTTGAAGCCTCCTACATTCCAGAACATAAGCTGTGATCCCCAAATGAGCACGGTTGTCCTGCGAGAGATGTACTTTGCTCTAGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS TCA 90 bp | CACCTTGCTGATGTTGCTGTATCATCTGTTTTAGGACATGAAGGATaGGCTGCAAGGAAGCTGCTCAAGATCACACAGCTCGGGAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: HLADVAVSSVLGHEG*AARKLLKITQLGKR Trigger: CCTTTTCCCGAGCTGTGTGATCTTGAGCAGCTTCCTTGCAGCTCATCCTTCATGTCCTAAAACAGATGATACAGCAACATCAGCAAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000457274.1 ENST00000667083.1 ENST00000669143.1 |
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| CDS GCA 90 bp | GGAGTAGATGTGAAGAAGTTGCTACCTTCCTGCATTGCTGGTGGGTaGACTGGAAAATGGTACAGCTGCATTGGAAAACAGTTTGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: GVDVKKLLPSCIAGG*TGKWYSCIGKQFVS Trigger: ACTGACAAACTGTTTTCCAATGCAGCTGTACCATTTTCCAGTGCACCCACCAGCAATGCAGGAAGGTAGCAACTTCTTCACATCTACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS CCA 90 bp | TTCTGGATCTCTCGTCTTCCTGTTTCTCAGTTTAGCCCCTTGTTTTaGTGGAGCACATCCTCCAAGCTCCAGAACAGCTTTCTCATAATG | + |
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Preference number: 5 (lower is better) Translates to: FWISRLPVSQFSPLF*WSTSSKLQNSFLIM Trigger: CATTATGAGAAAGCTGTTCTGGAGCTTGGAGGATGTGCTCCACCAAAACAAGGGGCTAAACTGAGAAACAGGAAGACGAGAGATCCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664459.1 ENST00000669143.1 |
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| CDS CCA 90 bp | TGCTGGAGTAGATGTGAAGAAGTTGCTACCTTCCTGCATTGCTGGTaGGTGCACTGGAAAATGGTACAGCTGCATTGGAAAACAGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: CWSRCEEVATFLHCW*VHWKMVQLHWKTVC Trigger: ACAAACTGTTTTCCAATGCAGCTGTACCATTTTCCAGTGCACCCACCAGCAATGCAGGAAGGTAGCAACTTCTTCACATCTACTCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS CCA 90 bp | AAGTGCTGGAGTAGATGTGAAGAAGTTGCTACCTTCCTGCATTGCTaGTGGGTGCACTGGAAAATGGTACAGCTGCATTGGAAAACAGTT | + |
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Preference number: 5 (lower is better) Translates to: KCWSRCEEVATFLHC*WVHWKMVQLHWKTV Trigger: AACTGTTTTCCAATGCAGCTGTACCATTTTCCAGTGCACCCACCAGCAATGCAGGAAGGTAGCAACTTCTTCACATCTACTCCAGCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS CCA 90 bp | AGATGTGAAGAAGTTGCTACCTTCCTGCATTGCTGGTGGGTGCACTaGAAAATGGTACAGCTGCATTGGAAAACAGTTTGTCAGTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: RCEEVATFLHCWWVH*KMVQLHWKTVCQFL Trigger: GAGAAACTGACAAACTGTTTTCCAATGCAGCTGTACCATTTTCCAGTGCACCCACCAGCAATGCAGGAAGGTAGCAACTTCTTCACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS TCA 90 bp | GGAAGTCATGACAGAAACTGGACTGGGTCTAGGAGTGGGTTTGATTaGCTAATTAACTGGCTTGAATCCAGTTACAGGTCTCTTAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: GSHDRNWTGSRSGFD*LINWLESSYRSLRS Trigger: AGACCTAAGAGACCTGTAACTGGATTCAAGCCAGTTAATTAGTCAATCAAACCCACTCCTAGACCCAGTCCAGTTTCTGTCATGACTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664459.1 |
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| CDS TCA 90 bp | GGCATAGGGCAAAGGACAGAACAAAAAGTCCTCTCTCTGCTCAACTaGGACAAATCCGTACCTGACTGCTTCCTATACTCTATGATTATT | + |
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Preference number: 5 (lower is better) Translates to: GIGQRTEQKVLSLLN*DKSVPDCFLYSMII Trigger: AATAATCATAGAGTATAGGAAGCAGTCAGGTACGGATTTGTCTCAGTTGAGCAGAGAGAGGACTTTTTGTTCTGTCCTTTGCCCTATGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS TCA 90 bp | ATGTTTCTTCAAGGGTGTGTGAAAGAAAAATACAATCTCAGTACCTaGAGCTCACTAAGCCAAAGGCAAAAGTCAAGCTGGGAGCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: MFLQGCVKEKYNLST*SSLSQRQKSSWELG Trigger: ACCCAGCTCCCAGCTTGACTTTTGCCTTTGGCTTAGTGAGCTTCAGGTACTGAGATTGTATTTTTCTTTCACACACCCTTGAAGAAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS CCA 90 bp | AAGTTTGGTCTAAGAGTTTATCTGTACATCGTGAACTATAACAAGTaGAGTTGTAAACAGACCATAGCCTACACTCGTGCCAGTCACCCA | + |
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Preference number: 5 (lower is better) Translates to: KFGLRVYLYIVNYNK*SCKQTIAYTRASHP Trigger: TGGGTGACTGGCACGAGTGTAGGCTATGGTCTGTTTACAACTCCACTTGTTATAGTTCACGATGTACAGATAAACTCTTAGACCAAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664459.1 |
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| CDS CCA 90 bp | CCACTGGGGATCATGGTAAGTTCTCTCTTGAGTTTTAGAGCTCCATaGATTTGTGCTTTGAGTTCTCTGAGTTTCTTTGAGCTAATTTCT | + |
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Preference number: 5 (lower is better) Translates to: PLGIMVSSLLSFRAP*ICALSSLSFFELIS Trigger: AGAAATTAGCTCAAAGAAACTCAGAGAACTCAAAGCACAAATCCATGGAGCTCTAAAACTCAAGAGAGAACTTACCATGATCCCCAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664459.1 |
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| CDS TCA 90 bp | AACAGTTTGTCAGTTTCTCAAAAAGTTAAACATAGAGCTACCAAATaGCCTGGCAATTCCACTCCTAGTTATCTACCCAAGAGAGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: NSLSVSQKVKHRATK*PGNSTPSYLPKREV Trigger: CACCTCTCTCTTGGGTAGATAACTAGGAGTGGAATTGCCAGGTCATTTGGTAGCTCTATGTTTAACTTTTTGAGAAACTGACAAACTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS GCA 90 bp | CTGTTAGCACACATGCAGAAAGCTTCCTCTTTGATTAATCTAGTTTaGCAATTTATAGTTTACAGAGCCAGCAGATCCATAACATCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LLAHMQKASSLINLV*QFIVYRASRSITSA Trigger: TGCTGATGTTATGGATCTGCTGGCTCTGTAAACTATAAATTGGCAAACTAGATTAATCAAAGAGGAAGCTTTCTGCATGTGTGCTAACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS TCA 90 bp | TGCTCAACTGAGACAAATCCGTACCTGACTGCTTCCTATACTCTATaGTTATTTTATCTTATGTTAAAAACGCAGATTCACGGAACCAGA | + |
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Preference number: 5 (lower is better) Translates to: CSTETNPYLTASYTL*LFYLMLKTQIHGTR Trigger: TCTGGTTCCGTGAATCTGCGTTTTTAACATAAGATAAAATAATCATAGAGTATAGGAAGCAGTCAGGTACGGATTTGTCTCAGTTGAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS TCA 90 bp | CTGTCTGAACAGAAACCTTCATTACCATATGCTGAAACTTTGATGTaGAAGCCTGCCCTCTTAAATCTTATTTCTCCAGCAAGTATATTA | + |
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Preference number: 5 (lower is better) Translates to: LSEQKPSLPYAETLM*KPALLNLISPASIL Trigger: TAATATACTTGCTGGAGAAATAAGATTTAAGAGGGCAGGCTTTCACATCAAAGTTTCAGCATATGGTAATGAAGGTTTCTGTTCAGACAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS CCA 90 bp | CCTCTATTTTCTTATCTATGTTCTTTCTGGCTGTTTCATCCACTGTaGAAAGTAGGGTCATTGAAGTGTCTTACCATTATTGTAGAACTA | + |
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Preference number: 5 (lower is better) Translates to: PLFSYLCSFWLFHPL*KVGSLKCLTIIVEL Trigger: TAGTTCTACAATAATGGTAAGACACTTCAATGACCCTACTTTCCACAGTGGATGAAACAGCCAGAAAGAACATAGATAAGAAAATAGAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS TCA 90 bp | CAAATGTTCATAGGTACTTTATTCATAATAGCCCCAAATTGGAAATaGCCAAAATGCCCATCAGTTGGATCAATTGGTGAACAGATAAAC | + |
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Preference number: 5 (lower is better) Translates to: QMFIGTLFIIAPNWK*PKCPSVGSIGEQIN Trigger: GTTTATCTGTTCACCAATTGATCCAACTGATGGGCATTTTGGTCATTTCCAATTTGGGGCTATTATGAATAAAGTACCTATGAACATTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS GCA 90 bp | CTTACTAAAGATAACTTACAGTGGAATGTTCCAAATGAACAACAATaGACTGAAGTGCATTTGAAAATGAGGGCTTCCAAATTAGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: LTKDNLQWNVPNEQQ*TEVHLKMRASKLVS Trigger: TGAGACTAATTTGGAAGCCCTCATTTTCAAATGCACTTCAGTGCATTGTTGTTCATTTGGAACATTCCACTGTAAGTTATCTTTAGTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664459.1 |
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| CDS GCA 90 bp | TTTTGTCAATGTTTGCTTCAAATAATTAGGCACTCTAATGTTTGGTaGATATGTGTTTATAATTGTCATTGCTCCCTGATGAAGTCACCC | + |
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Preference number: 5 (lower is better) Translates to: FCQCLLQIIRHSNVW*ICVYNCHCSLMKSP Trigger: GGGTGACTTCATCAGGGAGCAATGACAATTATAAACACATATGCACCAAACATTAGAGTGCCTAATTATTTGAAGCAAACATTGACAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS GCA 72 bp | CTGGGAGCTGGGCTGCCACCTCCTCCAAACCAACACTaGTCAGTGCCAGGGAAGGGTGCAGAAAGGGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LGAGLPPPPNQH*SVPGKGAERGS Trigger: ACTCCCCCTTTCTGCACCCTTCCCTGGCACTGAGCAGTGTTGGTTTGGAGGAGGTGGCAGCCCAGCTCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000457274.1 ENST00000667083.1 |
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| CDS CCA 72 bp | CCCCAGCTTGTTTCCCTGCAACTAGATGGTCCCATCTaGCACGCTGAGGGCCAGGGCATAGGGGTGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: PQLVSLQLDGPI*HAEGQGIGVTR Trigger: CCTGGTCACCCCTATGCCCTGGCCCTCAGCGTGCCAGATGGGACCATCTAGTTGCAGGGAAACAAGCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657180.1 ENST00000664459.1 ENST00000669143.1 |
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| CDS CAA 90 bp | GGCTCCTCCCTTGTGAATGGAAGAGGCACCATCACAGTATCCGGCTaGCCTGCCCTTCTGCCTTCCCTGAGGACGCAGGGCTCCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GSSLVNGRGTITVSG*PALLPSLRTQGSFS Trigger: AGAGAAGGAGCCCTGCGTCCTCAGGGAAGGCAGAAGGGCAGGCAAGCCGGATACTGTGATGGTGCCTCTTCCATTCACAAGGGAGGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457274.1 ENST00000667083.1 ENST00000669143.1 |
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| CDS CAA 72 bp | CCTACTCAGCATGCGGGGGCAGAGGCTTGGGCTTGCTaGACCCTGACCAGGCCCAGTTTGATGGGAACACAA | + |
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Preference number: 6 (lower is better) Translates to: PTQHAGAEAWAC*TLTRPSLMGTQ Trigger: TTGTGTTCCCATCAAACTGGGCCTGGTCAGGGTCAAGCAAGCCCAAGCCTCTGCCCCCGCATGCTGAGTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS CAA 90 bp | GCGGGGGCAGAGGCTTGGGCTTGCTTGACCCTGACCAGGCCCAGTTaGATGGGAACACAAACCCACTGCTATGTAAAACCTTGCGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: AGAEAWACLTLTRPS*MGTQTHCYVKPCVE Trigger: CTCCACGCAAGGTTTTACATAGCAGTGGGTTTGTGTTCCCATCAAACTGGGCCTGGTCAGGGTCAAGCAAGCCCAAGCCTCTGCCCCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS GCA 72 bp | CTGGGCTGCCACCTCCTCCAAACCAACACTGCTCAGTaGCAGGGAAGGGTGCAGAAAGGGGGAGTACAAATC | + |
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Preference number: 6 (lower is better) Translates to: LGCHLLQTNTAQ*QGRVQKGGVQI Trigger: GATTTGTACTCCCCCTTTCTGCACCCTTCCCTGGCACTGAGCAGTGTTGGTTTGGAGGAGGTGGCAGCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000457274.1 ENST00000667083.1 |
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| CDS GCA 72 bp | TGCCGGAGCCTCCAAGCCTACTCTGTCAGGGAAGGCTaGCCAATTCGCGAGTCGTTCATTGCTCCATTGCAC | + |
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Preference number: 6 (lower is better) Translates to: CRSLQAYSVREG*PIRESFIAPLH Trigger: GTGCAATGGAGCAATGAACGACTCGCGAATTGGGCAGCCTTCCCTGACAGAGTAGGCTTGGAGGCTCCGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664459.1 |
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| CDS CCA 72 bp | GGATCGCCAATTTCCCTTGTTACCTTGGATTTCCCCTaGCCCCAGGGCTCAGGACGCTTGTCCATGCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GSPISLVTLDFP*PQGSGRLSMPV Trigger: GACAGGCATGGACAAGCGTCCTGAGCCCTGGGGCCAGGGGAAATCCAAGGTAACAAGGGAAATTGGCGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000457274.1 ENST00000667083.1 ENST00000669143.1 |
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| CDS CAA 72 bp | TCTAGCCATGCACCTGGCTGGGATCGCCAATTTCCCTaGTTACCTTGGATTTCCCCTGGCCCCAGGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SSHAPGWDRQFP*LPWISPGPRAQ Trigger: CTGAGCCCTGGGGCCAGGGGAAATCCAAGGTAACAAGGGAAATTGGCGATCCCAGCCAGGTGCATGGCTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000457274.1 ENST00000667083.1 ENST00000669143.1 |
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| CDS TCA 72 bp | ATGCAGCAAGAAGGCACTGTATCTAAAGGAGTCCAGTaGGCACTGGCCTTAGCTGCGTCCCCTCAGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: MQQEGTVSKGVQ*ALALAASPQPW Trigger: CCAGGGCTGAGGGGACGCAGCTAAGGCCAGTGCTCACTGGACTCCTTTAGATACAGTGCCTTCTTGCTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669143.1 |
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| CDS GCA 72 bp | GGCTCCTTCTCTCCAGAGGATGCAGCAAGAAGGCACTaGTGGTTGTCATGGAAGAGCCTGCTGATCACGCCT | + |
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Preference number: 6 (lower is better) Translates to: GSFSPEDAARRH*WLSWKSLLITP Trigger: AGGCGTGATCAGCAGGCTCTTCCATGACAACCAGCAGTGCCTTCTTGCTGCATCCTCTGGAGAGAAGGAGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457274.1 |
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| CDS CAA 90 bp | CAGGGCTCCTTCTCTCCAGAGGATGCAGCAAGAAGGCACTGCTGGTaGTCATGGAAGAGCCTGCTGATCACGCCTCACTATCCATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QGSFSPEDAARRHCW*SWKSLLITPHYPFS Trigger: GGAGAATGGATAGTGAGGCGTGATCAGCAGGCTCTTCCATGACAACCAGCAGTGCCTTCTTGCTGCATCCTCTGGAGAGAAGGAGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457274.1 |
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| CDS TCA 72 bp | ATACTACAGAGAGTCCCTGTATCTAAAGGAGTCCAGTaGGCACTGGCCTTAGCTGCGTCCCCTCAGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ILQRVPVSKGVQ*ALALAASPQPW Trigger: CCAGGGCTGAGGGGACGCAGCTAAGGCCAGTGCTCACTGGACTCCTTTAGATACAGGGACTCTCTGTAGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664459.1 |
||
| CDS GCA 72 bp | CTGACCAGGCCCAGTTTGATGGGAACACAAACCCACTaGTATGTAAAACCTTGCGTGGAGGTGCTGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LTRPSLMGTQTH*YVKPCVEVLLG Trigger: CCCCAGCAGCACCTCCACGCAAGGTTTTACATAGCAGTGGGTTTGTGTTCCCATCAAACTGGGCCTGGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667083.1 |
||
| CDS CCA 72 bp | TGCAGGGAAACATTCCTAAACACACATCCTCCTGGTTaGGCAGTGCCCAGGCTATGCAGAGCAGGCCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: CRETFLNTHPPG*AVPRLCRAGLE Trigger: TTCGAGGCCTGCTCTGCATAGCCTGGGCACTGCCCAACCAGGAGGATGTGTGTTTAGGAATGTTTCCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667083.1 |
||
| CDS GCA 72 bp | TCACTAACATTAGAGGGAAAGAACTGGGAGCTGGGCTaGCACCTCCTCCAAACCAACACTGCTCAGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLTLEGKNWELG*HLLQTNTAQCQ Trigger: CTGGCACTGAGCAGTGTTGGTTTGGAGGAGGTGGCAGCCCAGCTCCCAGTTCTTTCCCTCTAATGTTAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457274.1 ENST00000667083.1 |
||
| CDS CCA 72 bp | CCAGAGGATGCAGCAAGAAGGCACTGCTGGTTGTCATaGAAGAGCCTGCTGATCACGCCTCACTATCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: PEDAARRHCWLS*KSLLITPHYPF Trigger: GAATGGATAGTGAGGCGTGATCAGCAGGCTCTTCCATGACAACCAGCAGTGCCTTCTTGCTGCATCCTCTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457274.1 |
||
| CDS CAA 72 bp | ACTGCTCACACTTGTCTTCCGTGGCTCAGAAGTAGGTaGGACCCAGAGGCCTCCTTAAGCTCTGTCCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: TAHTCLPWLRSR*DPEASLSSVQV Trigger: AACCTGGACAGAGCTTAAGGAGGCCTCTGGGTCCAACCTACTTCTGAGCCACGGAAGACAAGTGTGAGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664459.1 ENST00000669143.1 |
||
| CDS CAA 90 bp | CTGGCCCCAGGGCTCAGGACGCTTGTCCATGCCTGTCCTATGGACTaGTCTTATCCCAGGTTCCTTAGAAATAGGATAATGGGTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LAPGLRTLVHACPMD*SYPRFLRNRIMGLL Trigger: CAGCAGACCCATTATCCTATTTCTAAGGAACCTGGGATAAGACAAGTCCATAGGACAGGCATGGACAAGCGTCCTGAGCCCTGGGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457274.1 ENST00000667083.1 ENST00000669143.1 |
||
| CDS TCA 72 bp | TCAGCAGGCCCTGCTGGTTGTCATGGAAGAGCCTGCTaGTCACGCCTCACTATCCATTCTCCATTTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SAGPAGCHGRAC*SRLTIHSPFFL Trigger: CAGGAAAAATGGAGAATGGATAGTGAGGCGTGATCAGCAGGCTCTTCCATGACAACCAGCAGGGCCTGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667083.1 |
||
| CDS GCA 72 bp | TTTTCTGTCCATAAATCTTCTTCCACCATGTGGCTGTaGCGGAGCCTCCAAGCCTACTCTGTCAGGGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FSVHKSSSTMWL*RSLQAYSVREG Trigger: GCCTTCCCTGACAGAGTAGGCTTGGAGGCTCCGGCACAGCCACATGGTGGAAGAAGATTTATGGACAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664459.1 |
||
| CDS CCA 72 bp | CCCCAGGGCTCAGGACGCTTGTCCATGCCTGTCCTATaGACTTGTCTTATCCCAGGTTCCTTAGAAATAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PQGSGRLSMPVL*TCLIPGSLEIG Trigger: TCCTATTTCTAAGGAACCTGGGATAAGACAAGTCCATAGGACAGGCATGGACAAGCGTCCTGAGCCCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457274.1 ENST00000667083.1 ENST00000669143.1 |
||
| CDS CAA 72 bp | GAGGCTTGGGCTTGCTTGACCCTGACCAGGCCCAGTTaGATGGGAACACAAACCCACTGCTATGTAAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: EAWACLTLTRPS*MGTQTHCYVKP Trigger: AGGTTTTACATAGCAGTGGGTTTGTGTTCCCATCAAACTGGGCCTGGTCAGGGTCAAGCAAGCCCAAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667083.1 |
||
| CDS CAA 90 bp | AAGGATAAGACTGCTCACACTTGTCTTCCGTGGCTCAGAAGTAGGTaGGACCCAGAGGCCTCCTTAAGCTCTGTCCAGGTTGCAGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: KDKTAHTCLPWLRSR*DPEASLSSVQVAES Trigger: AGACTCTGCAACCTGGACAGAGCTTAAGGAGGCCTCTGGGTCCAACCTACTTCTGAGCCACGGAAGACAAGTGTGAGCAGTCTTATCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664459.1 ENST00000669143.1 |
||
| CDS TCA 72 bp | GAAGTAGAGCTTCTAACGACCCCCAGGGGCGCTAAGTaGACAAGTGAGGTACCAACAGGATCCATTTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: EVELLTTPRGAK*TSEVPTGSICV Trigger: GACACAAATGGATCCTGTTGGTACCTCACTTGTTCACTTAGCGCCCCTGGGGGTCGTTAGAAGCTCTACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664459.1 |
||
| CDS GCA 72 bp | GTTGGACCCAGAGGCCTCCTTAAGCTCTGTCCAGGTTaGAGAGTCTCTGAAAACACCTGTAACAGGTATTCC | + |
|
Preference number: 6 (lower is better) Translates to: VGPRGLLKLCPG*RVSENTCNRYS Trigger: GGAATACCTGTTACAGGTGTTTTCAGAGACTCTGCAACCTGGACAGAGCTTAAGGAGGCCTCTGGGTCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664459.1 ENST00000669143.1 |
||
| CDS GCA 72 bp | AAGGAAAACTATAGGTATAGAAAGCAGACCCGTGGTTaGCAGCTTGGGGTGGGTCTGAGAAGAGGAGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: KENYRYRKQTRG*QLGVGLRRGAD Trigger: GTCAGCTCCTCTTCTCAGACCCACCCCAAGCTGGCAACCACGGGTCTGCTTTCTATACCTATAGTTTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657180.1 |
||
| CDS CCA 72 bp | TCCGAAGGAAAGAACTGCTCTAGCCATGCACCTGGCTaGGATCGCCAATTTCCCTTGTTACCTTGGATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SEGKNCSSHAPG*DRQFPLLPWIS Trigger: GGAAATCCAAGGTAACAAGGGAAATTGGCGATCCCAGCCAGGTGCATGGCTAGAGCAGTTCTTTCCTTCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457274.1 ENST00000667083.1 ENST00000669143.1 |
||
| CDS CCA 72 bp | GTTAGACTCTGCTCACTAACATTAGAGGGAAAGAACTaGGAGCTGGGCTGCCACCTCCTCCAAACCAACACT | + |
|
Preference number: 6 (lower is better) Translates to: VRLCSLTLEGKN*ELGCHLLQTNT Trigger: AGTGTTGGTTTGGAGGAGGTGGCAGCCCAGCTCCCAGTTCTTTCCCTCTAATGTTAGTGAGCAGAGTCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457274.1 ENST00000667083.1 |
||
| CDS CCA 72 bp | ACAACCGTGCTCATTTGGGGATCACAGCTTATGTTCTaGAATGTAGGAGGCTTCAACCAGGCACAGCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: TTVLIWGSQLMF*NVGGFNQAQPD Trigger: GTCTGGCTGTGCCTGGTTGAAGCCTCCTACATTCCAGAACATAAGCTGTGATCCCCAAATGAGCACGGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667083.1 |
||
| CDS TCA 72 bp | CAAGAAGGCACTGCTGGTTGTCATGGAAGAGCCTGCTaGTCACGCCTCACTATCCATTCTCCATTTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QEGTAGCHGRAC*SRLTIHSPFFL Trigger: CAGGAAAAATGGAGAATGGATAGTGAGGCGTGATCAGCAGGCTCTTCCATGACAACCAGCAGTGCCTTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457274.1 |
||
| CDS TCA 72 bp | TCCCCAGAGAGATCTGTCAGCAGATTCCATGGGAGATaGGTCTGTCTAGTGTGCACGCTTTTCTCCAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SPERSVSRFHGR*VCLVCTLFSSK Trigger: TTTGCTGGAGAAAAGCGTGCACACTAGACAGACTCATCTCCCATGGAATCTGCTGACAGATCTCTCTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657180.1 |
||
| CDS TCA 72 bp | CATAAAACTCCAAACTCATCTCCACAGGAGCAGGAATaGTTCAGCAGGCCCTGCTGGTTGTCATGGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HKTPNSSPQEQE*FSRPCWLSWKS Trigger: GCTCTTCCATGACAACCAGCAGGGCCTGCTGAATCATTCCTGCTCCTGTGGAGATGAGTTTGGAGTTTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667083.1 |
||
| CDS GCA 72 bp | AGTGCTGGAGTAGATGTGAAGAAGTTGCTACCTTCCTaGATTGCTGGTGGGTGCACTGGAAAATGGTACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SAGVDVKKLLPS*IAGGCTGKWYS Trigger: GCTGTACCATTTTCCAGTGCACCCACCAGCAATGCAGGAAGGTAGCAACTTCTTCACATCTACTCCAGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657180.1 |
||
| CDS CCA 72 bp | GTGATTAAGGATAAGACTGCTCACACTTGTCTTCCGTaGCTCAGAAGTAGGTTGGACCCAGAGGCCTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: VIKDKTAHTCLP*LRSRLDPEASL Trigger: TAAGGAGGCCTCTGGGTCCAACCTACTTCTGAGCCACGGAAGACAAGTGTGAGCAGTCTTATCCTTAATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664459.1 ENST00000669143.1 |
||
| CDS CCA 72 bp | TTTCCTTTTTCTGTCCATAAATCTTCTTCCACCATGTaGCTGTGCCGGAGCCTCCAAGCCTACTCTGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FPFSVHKSSSTM*LCRSLQAYSVR Trigger: CCTGACAGAGTAGGCTTGGAGGCTCCGGCACAGCCACATGGTGGAAGAAGATTTATGGACAGAAAAAGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664459.1 |
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| CDS CCA 72 bp | GCAAAGTACATCTCTCGCAGGACAACCGTGCTCATTTaGGGATCACAGCTTATGTTCTGGAATGTAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AKYISRRTTVLI*GSQLMFWNVGG Trigger: GCCTCCTACATTCCAGAACATAAGCTGTGATCCCCAAATGAGCACGGTTGTCCTGCGAGAGATGTACTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS CAA 90 bp | CAGGCCCAGTTTGATGGGAACACAAACCCACTGCTATGTAAAACCTaGCGTGGAGGTGCTGCTGGGGTAAAGGATGGTCAAATATTCACA | + |
|
Preference number: 6 (lower is better) Translates to: QAQFDGNTNPLLCKT*RGGAAGVKDGQIFT Trigger: TGTGAATATTTGACCATCCTTTACCCCAGCAGCACCTCCACGCAAGGTTTTACATAGCAGTGGGTTTGTGTTCCCATCAAACTGGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS TCA 72 bp | GAGCTGACTACAAGGGGCACAAGGGAACTTCTGAGGTaGTGGAAATGTTCCGTGTCTTCATCATGGTGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: ELTTRGTRELLR*WKCSVSSSWWL Trigger: TAACCACCATGATGAAGACACGGAACATTTCCATCACCTCAGAAGTTCCCTTGTGCCCCTTGTAGTCAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS GCA 72 bp | CTAATCCTTCAAGCCATCCCCAGACAGGTTAGACTCTaGTCACTAACATTAGAGGGAAAGAACTGGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LILQAIPRQVRL*SLTLEGKNWEL Trigger: CAGCTCCCAGTTCTTTCCCTCTAATGTTAGTGAGCAGAGTCTAACCTGTCTGGGGATGGCTTGAAGGATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457274.1 ENST00000667083.1 |
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| CDS GCA 72 bp | GTGAAGAAGTTGCTACCTTCCTGCATTGCTGGTGGGTaGACTGGAAAATGGTACAGCTGCATTGGAAAACAG | + |
|
Preference number: 6 (lower is better) Translates to: VKKLLPSCIAGG*TGKWYSCIGKQ Trigger: CTGTTTTCCAATGCAGCTGTACCATTTTCCAGTGCACCCACCAGCAATGCAGGAAGGTAGCAACTTCTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS CCA 72 bp | CGCAGATGTTTCCTGTGGGTACGTGTTCCTTTCTCCTaGGCGTGTCTTTCACCTCGGCAAAATATACTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: RRCFLWVRVPFS*ACLSPRQNILL Trigger: TAGAAGTATATTTTGCCGAGGTGAAAGACACGCCCAGGAGAAAGGAACACGTACCCACAGGAAACATCTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS CAA 72 bp | GGGCTCAGGACGCTTGTCCATGCCTGTCCTATGGACTaGTCTTATCCCAGGTTCCTTAGAAATAGGATAATG | + |
|
Preference number: 6 (lower is better) Translates to: GLRTLVHACPMD*SYPRFLRNRIM Trigger: CATTATCCTATTTCTAAGGAACCTGGGATAAGACAAGTCCATAGGACAGGCATGGACAAGCGTCCTGAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457274.1 ENST00000667083.1 ENST00000669143.1 |
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| CDS CAA 72 bp | TTTGATGGGAACACAAACCCACTGCTATGTAAAACCTaGCGTGGAGGTGCTGCTGGGGTAAAGGATGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: FDGNTNPLLCKT*RGGAAGVKDGQ Trigger: TTGACCATCCTTTACCCCAGCAGCACCTCCACGCAAGGTTTTACATAGCAGTGGGTTTGTGTTCCCATCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS CAA 72 bp | AGCAAAGTACATCTCTCGCAGGACAACCGTGCTCATTaGGGGATCACAGCTTATGTTCTGGAATGTAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SKVHLSQDNRAH*GITAYVLECRR Trigger: CCTCCTACATTCCAGAACATAAGCTGTGATCCCCAAATGAGCACGGTTGTCCTGCGAGAGATGTACTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS CAA 90 bp | CCAGCTTCTTTGTGTGCCCTTAGAGGGTTTATTACATGCTTCCATTaGAAATCTCTTGCCCAGGCATCTTCAGTCTCTGTAGCCTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PASLCALRGFITCFH*KSLAQASSVSVASL Trigger: CAGGGAGGCTACAGAGACTGAAGATGCCTGGGCAAGAGATTTCAAATGGAAGCATGTAATAAACCCTCTAAGGGCACACAAAGAAGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457274.1 ENST00000667083.1 |
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| CDS CAA 90 bp | TTACAGAGCCAGCAGATCCATAACATCAGCAAGAGGTATGCTGGGTaGTCAGATCTTCTAAGAAGACACAGAAATGGGGAGCCACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LQSQQIHNISKRYAG*SDLLRRHRNGEPLV Trigger: CACCAGTGGCTCCCCATTTCTGTGTCTTCTTAGAAGATCTGACAACCCAGCATACCTCTTGCTGATGTTATGGATCTGCTGGCTCTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS CCA 72 bp | CTACCTTCCTGCATTGCTGGTGGGTGCACTGGAAAATaGTACAGCTGCATTGGAAAACAGTTTGTCAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LPSCIAGGCTGK*YSCIGKQFVSF Trigger: GAAACTGACAAACTGTTTTCCAATGCAGCTGTACCATTTTCCAGTGCACCCACCAGCAATGCAGGAAGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS CCA 72 bp | GAAGTTGCTACCTTCCTGCATTGCTGGTGGGTGCACTaGAAAATGGTACAGCTGCATTGGAAAACAGTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: EVATFLHCWWVH*KMVQLHWKTVC Trigger: ACAAACTGTTTTCCAATGCAGCTGTACCATTTTCCAGTGCACCCACCAGCAATGCAGGAAGGTAGCAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657180.1 |
||
| CDS TCA 72 bp | CATTCTTCTCCAAGTCCATGGATTGGAAGCACCTGCTaGAAACCTGCAGCGTCTCAAATAACCTCTAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: HSSPSPWIGSTC*KPAASQITSKL Trigger: CAACTTAGAGGTTATTTGAGACGCTGCAGGTTTTCAGCAGGTGCTTCCAATCCATGGACTTGGAGAAGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667083.1 |
||
| CDS GCA 72 bp | GCACGCTTTTCTCCAGCAAAGTACAAAGGCCCTCTGTaGATCCATGGATCATATCATAATGTAGAACAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ARFSPAKYKGPL*IHGSYHNVEQG Trigger: CCCTTGTTCTACATTATGATATGATCCATGGATGCACAGAGGGCCTTTGTACTTTGCTGGAGAAAAGCGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657180.1 |
||
| CDS CCA 72 bp | AGCCTGTTTCATTTAAAACTGCTCATCCTCTGGAACTaGAGCACAGCTGCCATCCTAGGGTCATTTTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLFHLKLLILWN*STAAILGSFCH Trigger: ATGACAAAATGACCCTAGGATGGCAGCTGTGCTCCAGTTCCAGAGGATGAGCAGTTTTAAATGAAACAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664459.1 ENST00000669143.1 |
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| CDS CAA 72 bp | CTCTCAGAGCCACTGGGGATCATGGTAAGTTCTCTCTaGAGTTTTAGAGCTCCATGGATTTGTGCTTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LSEPLGIMVSSL*SFRAPWICALS Trigger: ACTCAAAGCACAAATCCATGGAGCTCTAAAACTCAAGAGAGAACTTACCATGATCCCCAGTGGCTCTGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664459.1 |
||
| CDS CAA 72 bp | CAGCAGATCCATAACATCAGCAAGAGGTATGCTGGGTaGTCAGATCTTCTAAGAAGACACAGAAATGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QQIHNISKRYAG*SDLLRRHRNGE Trigger: CTCCCCATTTCTGTGTCTTCTTAGAAGATCTGACAACCCAGCATACCTCTTGCTGATGTTATGGATCTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657180.1 |
||
| CDS GCA 72 bp | CCAGCTTCTTTGTGTGCCCTTAGAGGGTTTATTACATaGTTCCATTTGAAATCTCTTGCCCAGGCATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PASLCALRGFIT*FHLKSLAQASS Trigger: TGAAGATGCCTGGGCAAGAGATTTCAAATGGAAGCATGTAATAAACCCTCTAAGGGCACACAAAGAAGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457274.1 ENST00000667083.1 |
||
| CDS GCA 72 bp | GCGCAGACAATTCTTCTCTCTCTCACTCCTTCACTGTaGAAAATGGATGCGGGAATGGTAAAAATCACTATC | + |
|
Preference number: 6 (lower is better) Translates to: AQTILLSLTPSL*KMDAGMVKITI Trigger: GATAGTGATTTTTACCATTCCCGCATCCATTTTGCACAGTGAAGGAGTGAGAGAGAGAAGAATTGTCTGCGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000457274.1 ENST00000664459.1 |
||
| CDS GCA 72 bp | AAGGCTGCCCAATTCGCGAGTCGTTCATTGCTCCATTaGACTCCTTCAAATTTAATTTGGCTGAGGTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: KAAQFASRSLLH*TPSNLIWLRFF Trigger: GAAAAACCTCAGCCAAATTAAATTTGAAGGAGTGCAATGGAGCAATGAACGACTCGCGAATTGGGCAGCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664459.1 |
||
| CDS CAA 72 bp | GAAGGCTGCCCAATTCGCGAGTCGTTCATTGCTCCATaGCACTCCTTCAAATTTAATTTGGCTGAGGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: EGCPIRESFIAP*HSFKFNLAEVF Trigger: AAAAACCTCAGCCAAATTAAATTTGAAGGAGTGCAATGGAGCAATGAACGACTCGCGAATTGGGCAGCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664459.1 |
||
| CDS CAA 90 bp | TCTGTCAGGGAAGGCTGCCCAATTCGCGAGTCGTTCATTGCTCCATaGCACTCCTTCAAATTTAATTTGGCTGAGGTTTTTCTTTTATCA | + |
|
Preference number: 6 (lower is better) Translates to: SVREGCPIRESFIAP*HSFKFNLAEVFLLS Trigger: TGATAAAAGAAAAACCTCAGCCAAATTAAATTTGAAGGAGTGCAATGGAGCAATGAACGACTCGCGAATTGGGCAGCCTTCCCTGACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664459.1 |
||
| CDS TCA 72 bp | GCAAGCTGGTCAGTAATAAACTTTGTTACAGATCCCTaGAACAAACGAAGAAACGGGATGAGGTCTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: ASWSVINFVTDP*NKRRNGMRSPS Trigger: AGATGGAGACCTCATCCCGTTTCTTCGTTTGTTTCAGGGATCTGTAACAAAGTTTATTACTGACCAGCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457274.1 ENST00000664459.1 |
||
| CDS TCA 72 bp | TTGTTACAGATCCCTGAAACAAACGAAGAAACGGGATaGGGTCTCCATCTTGTTTATGTCCTTGTGAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLQIPETNEETG*GLHLVYVLVNL Trigger: CAAGTTCACAAGGACATAAACAAGATGGAGACCTCATCCCGTTTCTTCGTTTGTTTCAGGGATCTGTAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457274.1 ENST00000664459.1 |
||
| CDS CCA 72 bp | CTAAGAGTTTATCTGTACATCGTGAACTATAACAAGTaGAGTTGTAAACAGACCATAGCCTACACTCGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRVYLYIVNYNK*SCKQTIAYTRA Trigger: GGCACGAGTGTAGGCTATGGTCTGTTTACAACTCCACTTGTTATAGTTCACGATGTACAGATAAACTCTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664459.1 |
||
| CDS CAA 90 bp | TCTTTAGCAAGAAGTGTCACATTGGTGCCTTGTGAGATTAGAGAGTaGGGACTGTTAGCACACATGCAGAAAGCTTCCTCTTTGATTAAT | + |
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Preference number: 6 (lower is better) Translates to: SLARSVTLVPCEIRE*GLLAHMQKASSLIN Trigger: ATTAATCAAAGAGGAAGCTTTCTGCATGTGTGCTAACAGTCCCAACTCTCTAATCTCACAAGGCACCAATGTGACACTTCTTGCTAAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS CAA 90 bp | ATGGTAAGTTCTCTCTTGAGTTTTAGAGCTCCATGGATTTGTGCTTaGAGTTCTCTGAGTTTCTTTGAGCTAATTTCTGACCCAAACTCG | + |
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Preference number: 6 (lower is better) Translates to: MVSSLLSFRAPWICA*SSLSFFELISDPNS Trigger: CGAGTTTGGGTCAGAAATTAGCTCAAAGAAACTCAGAGAACTCAAAGCACAAATCCATGGAGCTCTAAAACTCAAGAGAGAACTTACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664459.1 |
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| CDS CCA 72 bp | CATGCAAACCTGCCTCCTATTTTGTTCCCAAATAGATaGCTACATCCTTCCTCAAGTTTTTCTCACAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: HANLPPILFPNR*LHPSSSFSHKK Trigger: TTTCTTGTGAGAAAAACTTGAGGAAGGATGTAGCCATCTATTTGGGAACAAAATAGGAGGCAGGTTTGCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS CAA 90 bp | ATTAGAGAGTTGGGACTGTTAGCACACATGCAGAAAGCTTCCTCTTaGATTAATCTAGTTTGCCAATTTATAGTTTACAGAGCCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: IRELGLLAHMQKASS*INLVCQFIVYRASR Trigger: TCTGCTGGCTCTGTAAACTATAAATTGGCAAACTAGATTAATCAAAGAGGAAGCTTTCTGCATGTGTGCTAACAGTCCCAACTCTCTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS TCA 72 bp | TCAGTTTCTCAAAAAGTTAAACATAGAGCTACCAAATaGCCTGGCAATTCCACTCCTAGTTATCTACCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SVSQKVKHRATK*PGNSTPSYLPK Trigger: CTTGGGTAGATAACTAGGAGTGGAATTGCCAGGTCATTTGGTAGCTCTATGTTTAACTTTTTGAGAAACTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS TCA 72 bp | AAAACGCAGATTCACGGAACCAGAAGAATGCATAATTaGCTTTTCCTTAGCCGGCTTCTTTCACATGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: KTQIHGTRRMHN*LFLSRLLSHEK Trigger: TTTTTCATGTGAAAGAAGCCGGCTAAGGAAAAGTCAATTATGCATTCTTCTGGTTCCGTGAATCTGCGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS TCA 72 bp | AGTCCTCTCTCTGCTCAACTGAGACAAATCCGTACCTaGCTGCTTCCTATACTCTATGATTATTTTATCTTA | + |
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Preference number: 6 (lower is better) Translates to: SPLSAQLRQIRT*LLPILYDYFIL Trigger: TAAGATAAAATAATCATAGAGTATAGGAAGCAGTCAGGTACGGATTTGTCTCAGTTGAGCAGAGAGAGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS CAA 72 bp | AATGTTCCAAATGAACAACAATGCACTGAAGTGCATTaGAAAATGAGGGCTTCCAAATTAGTCTCATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: NVPNEQQCTEVH*KMRASKLVSSG Trigger: CCCAGATGAGACTAATTTGGAAGCCCTCATTTTCAAATGCACTTCAGTGCATTGTTGTTCATTTGGAACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664459.1 |
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| CDS CAA 72 bp | TTCTGGCTGTTTCATCCACTGTGGAAAGTAGGGTCATaGAAGTGTCTTACCATTATTGTAGAACTATCTATT | + |
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Preference number: 6 (lower is better) Translates to: FWLFHPLWKVGS*KCLTIIVELSI Trigger: AATAGATAGTTCTACAATAATGGTAAGACACTTCAATGACCCTACTTTCCACAGTGGATGAAACAGCCAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS CAA 90 bp | TTACAGTGGAATGTTCCAAATGAACAACAATGCACTGAAGTGCATTaGAAAATGAGGGCTTCCAAATTAGTCTCATCTGGGAATACTTAT | + |
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Preference number: 6 (lower is better) Translates to: LQWNVPNEQQCTEVH*KMRASKLVSSGNTY Trigger: ATAAGTATTCCCAGATGAGACTAATTTGGAAGCCCTCATTTTCAAATGCACTTCAGTGCATTGTTGTTCATTTGGAACATTCCACTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664459.1 |
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| CDS TCA 72 bp | ACACAAAAAGCCACATACCGTGTGATTCCTTTTATATaGAATACCAAGAATGGGCAAATCTACAGAAACAGA | + |
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Preference number: 6 (lower is better) Translates to: TQKATYRVIPFI*NTKNGQIYRNR Trigger: TCTGTTTCTGTAGATTTGCCCATTCTTGGTATTTCATATAAAAGGAATCACACGGTATGTGGCTTTTTGTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS TCA 72 bp | ATAGGTACTTTATTCATAATAGCCCCAAATTGGAAATaGCCAAAATGCCCATCAGTTGGATCAATTGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: IGTLFIIAPNWK*PKCPSVGSIGE Trigger: TTCACCAATTGATCCAACTGATGGGCATTTTGGTCATTTCCAATTTGGGGCTATTATGAATAAAGTACCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657180.1 |
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| CDS CAA 72 bp | CACATTTACATGAGAACAATGTGTACTCCTCGTATGTaGTGTGGAGTGTTCTGCATATATTTATTAGATCCA | + |
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Preference number: 6 (lower is better) Translates to: HIYMRTMCTPRM*CGVFCIYLLDP Trigger: TGGATCTAATAAATATATGCAGAACACTCCACACAACATACGAGGAGTACACATTGTTCTCATGTAAATGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667083.1 |
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| CDS TCA 72 bp | AGGGCTTCCAAATTAGTCTCATCTGGGAATACTTATTaGTACGCAGAAGTTTCTAAAAAGATTTTGGCATTT | + |
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Preference number: 6 (lower is better) Translates to: RASKLVSSGNTY*YAEVSKKILAF Trigger: AAATGCCAAAATCTTTTTAGAAACTTCTGCGTATCAATAAGTATTCCCAGATGAGACTAATTTGGAAGCCCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664459.1 |
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