Pregenerated sensors for LINC01719 (Homo sapiens)
Ensembl gene IDs: ENSG00000233396Ensembl transcript IDs: ENST00000452883.5, ENST00000457465.3, ENST00000610820.4, ENST00000611275.5, ENST00000612371.5, ENST00000619720.1, ENST00000664959.1, ENST00000667400.1, ENST00000667626.1
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GTCCAATGGGATAAATCAGAACACTTAGGTTGTCCAGTGTTTAAATaGGCAGTGCAGGAAAAGCATGGAGCCAATGCCTGTCACGTAGTA | + |
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Preference number: 5 (lower is better) Translates to: VQWDKSEHLGCPVFK*AVQEKHGANACHVV Trigger: TACTACGTGACAGGCATTGGCTCCATGCTTTTCCTGCACTGCTCATTTAAACACTGGACAACCTAAGTGTTCTGATTTATCCCATTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000611275.5 ENST00000612371.5 ENST00000664959.1 ENST00000667400.1 ENST00000667626.1 |
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| CDS GCA 90 bp | CACGCCTCTCACCACCTTACCCTCCAACACGTTTGTGTCCTCGTTTaGTGGGTCAATTGCTACATTGTTATAACTTGTATATTTTATTCA | + |
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Preference number: 5 (lower is better) Translates to: HASHHLTLQHVCVLV*WVNCYIVITCIFYS Trigger: TGAATAAAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTAAGGTGGTGAGAGGCGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664959.1 |
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| CDS CCA 90 bp | GCCTCTCACCACCTTACCCTCCAACACGTTTGTGTCCTCGTTTGCTaGGTCAATTGCTACATTGTTATAACTTGTATATTTTATTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: ASHHLTLQHVCVLVC*VNCYIVITCIFYSE Trigger: CTCTGAATAAAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTAAGGTGGTGAGAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664959.1 |
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| CDS CCA 90 bp | AACTACAGAACATTGCTCGAGGAGATTCAGGAAGACCTAAATCAATaGACAGACATCTTGTGTCCATGGGTTGGAAGTTGTAACATGGTT | + |
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Preference number: 5 (lower is better) Translates to: NYRTLLEEIQEDLNQ*TDILCPWVGSCNMV Trigger: AACCATGTTACAACTTCCAACCCATGGACACAAGATGTCTGTCCATTGATTTAGGTCTTCCTGAATCTCCTCGAGCAATGTTCTGTAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664959.1 ENST00000667400.1 ENST00000667626.1 |
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| CDS TCA 90 bp | TTGCTCCAATGTGTATTATTACAAATACAACTGCAGGGACCAGACTaGCACATGTATCTGTCGTGCATCACTTGTCTATTTCTCTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: LLQCVLLQIQLQGPD*HMYLSCITCLFLCR Trigger: TCTACAGAGAAATAGACAAGTGATGCACGACAGATACATGTGTCAGTCTGGTCCCTGCAGTTGTATTTGTAATAATACACATTGGAGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000452883.5 ENST00000611275.5 ENST00000612371.5 ENST00000664959.1 ENST00000667400.1 ENST00000667626.1 |
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| CDS GCA 90 bp | GTCTATTTCTCTGTAGACACCCTCCAACACGTTTGTGTCCTCGTTTaGTGGGTCAATTGCTACATTGTTATAACTTGTATATTTTATTCA | + |
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Preference number: 5 (lower is better) Translates to: VYFSVDTLQHVCVLV*WVNCYIVITCIFYS Trigger: TGAATAAAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTGTCTACAGAGAAATAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452883.5 |
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| CDS CCA 90 bp | TATTTCTCTGTAGACACCCTCCAACACGTTTGTGTCCTCGTTTGCTaGGTCAATTGCTACATTGTTATAACTTGTATATTTTATTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: YFSVDTLQHVCVLVC*VNCYIVITCIFYSE Trigger: CTCTGAATAAAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTGTCTACAGAGAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452883.5 |
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| CDS CCA 90 bp | GACATCAAACTCAAATCCCTCCAACACGTTTGTGTCCTCGTTTGCTaGGTCAATTGCTACATTGTTATAACTTGTATATTTTATTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: DIKLKSLQHVCVLVC*VNCYIVITCIFYSE Trigger: CTCTGAATAAAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGATTTGAGTTTGATGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457465.3 ENST00000612371.5 ENST00000667400.1 |
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| CDS GCA 90 bp | CAAGACATCAAACTCAAATCCCTCCAACACGTTTGTGTCCTCGTTTaGTGGGTCAATTGCTACATTGTTATAACTTGTATATTTTATTCA | + |
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Preference number: 5 (lower is better) Translates to: QDIKLKSLQHVCVLV*WVNCYIVITCIFYS Trigger: TGAATAAAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGATTTGAGTTTGATGTCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457465.3 ENST00000612371.5 ENST00000667400.1 |
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| CDS CCA 90 bp | GAGATTCAGGAAGACCTAAATCAATGGACAGACATCTTGTGTCCATaGGTTGGAAGTTGTAACATGGTTAAGATAAAAATACAACTCAAA | + |
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Preference number: 5 (lower is better) Translates to: EIQEDLNQWTDILCP*VGSCNMVKIKIQLK Trigger: TTTGAGTTGTATTTTTATCTTAACCATGTTACAACTTCCAACCCATGGACACAAGATGTCTGTCCATTGATTTAGGTCTTCCTGAATCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000664959.1 ENST00000667400.1 ENST00000667626.1 |
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| CDS CCA 72 bp | AAGCCATTGTTCGAAGAAGGGTGCCCAGGGTCCAGCTaGTCGCCGAAAGCTTGCTCCGCAATACAGGCTAAG | + |
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Preference number: 6 (lower is better) Translates to: KPLFEEGCPGSS*SPKACSAIQAK Trigger: CTTAGCCTGTATTGCGGAGCAAGCTTTCGGCGACCAGCTGGACCCTGGGCACCCTTCTTCGAACAATGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000610820.4 ENST00000611275.5 ENST00000612371.5 ENST00000619720.1 ENST00000664959.1 ENST00000667626.1 |
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| CDS TCA 72 bp | ATCACAGCTCACTGCAGCATGGAATTCTCAGGCCTATaGCATCCTAGGGCCTCATCCACTGATTCCTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: ITAHCSMEFSGL*HPRASSTDSWD Trigger: GTCCCAGGAATCAGTGGATGAGGCCCTAGGATGTCATAGGCCTGAGAATTCCATGCTGCAGTGAGCTGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664959.1 ENST00000667400.1 ENST00000667626.1 |
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| CDS CAA 90 bp | CACCACCCCCAAACACGCCTCTCACCACCTTACCCTCCAACACGTTaGTGTCCTCGTTTGCTGGGTCAATTGCTACATTGTTATAACTTG | + |
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Preference number: 6 (lower is better) Translates to: HHPQTRLSPPYPPTR*CPRLLGQLLHCYNL Trigger: CAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTAAGGTGGTGAGAGGCGTGTTTGGGGGTGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664959.1 |
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| CDS GCA 72 bp | TTTTCAAGTTTAGGCACTACCTCTCCTTCACATACTTaGTCATCACCACCACCCCCAAACACGCCTCTCACC | + |
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Preference number: 6 (lower is better) Translates to: FSSLGTTSPSHT*SSPPPPNTPLT Trigger: GGTGAGAGGCGTGTTTGGGGGTGGTGGTGATGAGCAAGTATGTGAAGGAGAGGTAGTGCCTAAACTTGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664959.1 |
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| CDS CAA 72 bp | CAAACACGCCTCTCACCACCTTACCCTCCAACACGTTaGTGTCCTCGTTTGCTGGGTCAATTGCTACATTGT | + |
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Preference number: 6 (lower is better) Translates to: QTRLSPPYPPTR*CPRLLGQLLHC Trigger: ACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTAAGGTGGTGAGAGGCGTGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664959.1 |
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| CDS CAA 72 bp | ATTTTCAAGTTTAGGCACTACCTCTCCTTCACATACTaGCTCATCACCACCACCCCCAAACACGCCTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: IFKFRHYLSFTY*LITTTPKHASH Trigger: GTGAGAGGCGTGTTTGGGGGTGGTGGTGATGAGCAAGTATGTGAAGGAGAGGTAGTGCCTAAACTTGAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664959.1 |
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| CDS CAA 72 bp | ACTTGTCTATTTCTCTGTAGACACCCTCCAACACGTTaGTGTCCTCGTTTGCTGGGTCAATTGCTACATTGT | + |
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Preference number: 6 (lower is better) Translates to: TCLFLCRHPPTR*CPRLLGQLLHC Trigger: ACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTGTCTACAGAGAAATAGACAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452883.5 |
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| CDS CAA 72 bp | AAGGTGCCGTACTTGTACACAGACAACTACAGAACATaGCTCGAGGAGATTCAGGAAGACCTAAATCAATGG | + |
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Preference number: 6 (lower is better) Translates to: KVPYLYTDNYRT*LEEIQEDLNQW Trigger: CCATTGATTTAGGTCTTCCTGAATCTCCTCGAGCAATGTTCTGTAGTTGTCTGTGTACAAGTACGGCACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664959.1 ENST00000667400.1 ENST00000667626.1 |
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| CDS CAA 90 bp | TCGTGCATCACTTGTCTATTTCTCTGTAGACACCCTCCAACACGTTaGTGTCCTCGTTTGCTGGGTCAATTGCTACATTGTTATAACTTG | + |
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Preference number: 6 (lower is better) Translates to: SCITCLFLCRHPPTR*CPRLLGQLLHCYNL Trigger: CAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTGTCTACAGAGAAATAGACAAGTGATGCACGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452883.5 |
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| CDS GCA 72 bp | CACCACCTTACCCTCCAACACGTTTGTGTCCTCGTTTaGTGGGTCAATTGCTACATTGTTATAACTTGTATA | + |
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Preference number: 6 (lower is better) Translates to: HHLTLQHVCVLV*WVNCYIVITCI Trigger: TATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTAAGGTGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664959.1 |
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| CDS CAA 72 bp | CTCTGTAGACACCCTCCAACACGTTTGTGTCCTCGTTaGCTGGGTCAATTGCTACATTGTTATAACTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: LCRHPPTRLCPR*LGQLLHCYNLY Trigger: ATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTGTCTACAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452883.5 |
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| CDS CAA 72 bp | TCACCACCTTACCCTCCAACACGTTTGTGTCCTCGTTaGCTGGGTCAATTGCTACATTGTTATAACTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: SPPYPPTRLCPR*LGQLLHCYNLY Trigger: ATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTAAGGTGGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664959.1 |
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| CDS CAA 90 bp | ACACGCCTCTCACCACCTTACCCTCCAACACGTTTGTGTCCTCGTTaGCTGGGTCAATTGCTACATTGTTATAACTTGTATATTTTATTC | + |
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Preference number: 6 (lower is better) Translates to: TRLSPPYPPTRLCPR*LGQLLHCYNLYILF Trigger: GAATAAAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTAAGGTGGTGAGAGGCGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664959.1 |
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| CDS GCA 72 bp | TCTGTAGACACCCTCCAACACGTTTGTGTCCTCGTTTaGTGGGTCAATTGCTACATTGTTATAACTTGTATA | + |
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Preference number: 6 (lower is better) Translates to: SVDTLQHVCVLV*WVNCYIVITCI Trigger: TATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTGTCTACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452883.5 |
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| CDS CAA 72 bp | GAGATTCAGGAAGACCTAAATCAATGGACAGACATCTaGTGTCCATGGGTTGGAAGTTGTAACATGGTTAAG | + |
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Preference number: 6 (lower is better) Translates to: EIQEDLNQWTDI*CPWVGSCNMVK Trigger: CTTAACCATGTTACAACTTCCAACCCATGGACACAAGATGTCTGTCCATTGATTTAGGTCTTCCTGAATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664959.1 ENST00000667400.1 ENST00000667626.1 |
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| CDS CAA 90 bp | AGAATAATATGCCTGGGAATAAATTTGTTCAAGAAGGTGCCGTACTaGTACACAGACAACTACAGAACATTGCTCGAGGAGATTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: RIICLGINLFKKVPY*YTDNYRTLLEEIQE Trigger: TTCCTGAATCTCCTCGAGCAATGTTCTGTAGTTGTCTGTGTACAAGTACGGCACCTTCTTGAACAAATTTATTCCCAGGCATATTATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664959.1 ENST00000667400.1 ENST00000667626.1 |
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| CDS CCA 72 bp | GTAGACACCCTCCAACACGTTTGTGTCCTCGTTTGCTaGGTCAATTGCTACATTGTTATAACTTGTATATTT | + |
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Preference number: 6 (lower is better) Translates to: VDTLQHVCVLVC*VNCYIVITCIF Trigger: AAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTGTCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452883.5 |
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| CDS CCA 72 bp | CACCTTACCCTCCAACACGTTTGTGTCCTCGTTTGCTaGGTCAATTGCTACATTGTTATAACTTGTATATTT | + |
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Preference number: 6 (lower is better) Translates to: HLTLQHVCVLVC*VNCYIVITCIF Trigger: AAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTAAGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664959.1 |
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| CDS CAA 72 bp | CAAACTCAAATCCCTCCAACACGTTTGTGTCCTCGTTaGCTGGGTCAATTGCTACATTGTTATAACTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: QTQIPPTRLCPR*LGQLLHCYNLY Trigger: ATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGATTTGAGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457465.3 ENST00000612371.5 ENST00000667400.1 |
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| CDS CAA 90 bp | TTGCTCGAGGAGATTCAGGAAGACCTAAATCAATGGACAGACATCTaGTGTCCATGGGTTGGAAGTTGTAACATGGTTAAGATAAAAATA | + |
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Preference number: 6 (lower is better) Translates to: LLEEIQEDLNQWTDI*CPWVGSCNMVKIKI Trigger: TATTTTTATCTTAACCATGTTACAACTTCCAACCCATGGACACAAGATGTCTGTCCATTGATTTAGGTCTTCCTGAATCTCCTCGAGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000664959.1 ENST00000667400.1 ENST00000667626.1 |
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| CDS GCA 72 bp | AAACTCAAATCCCTCCAACACGTTTGTGTCCTCGTTTaGTGGGTCAATTGCTACATTGTTATAACTTGTATA | + |
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Preference number: 6 (lower is better) Translates to: KLKSLQHVCVLV*WVNCYIVITCI Trigger: TATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGATTTGAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457465.3 ENST00000612371.5 ENST00000667400.1 |
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| CDS CCA 72 bp | CTCAAATCCCTCCAACACGTTTGTGTCCTCGTTTGCTaGGTCAATTGCTACATTGTTATAACTTGTATATTT | + |
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Preference number: 6 (lower is better) Translates to: LKSLQHVCVLVC*VNCYIVITCIF Trigger: AAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGATTTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457465.3 ENST00000612371.5 ENST00000667400.1 |
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| CDS CAA 90 bp | TGTCTATTTCTCTGTAGACACCCTCCAACACGTTTGTGTCCTCGTTaGCTGGGTCAATTGCTACATTGTTATAACTTGTATATTTTATTC | + |
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Preference number: 6 (lower is better) Translates to: CLFLCRHPPTRLCPR*LGQLLHCYNLYILF Trigger: GAATAAAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGTGTCTACAGAGAAATAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452883.5 |
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| CDS CAA 90 bp | GCAAGACATCAAACTCAAATCCCTCCAACACGTTTGTGTCCTCGTTaGCTGGGTCAATTGCTACATTGTTATAACTTGTATATTTTATTC | + |
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Preference number: 6 (lower is better) Translates to: ARHQTQIPPTRLCPR*LGQLLHCYNLYILF Trigger: GAATAAAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAACGAGGACACAAACGTGTTGGAGGGATTTGAGTTTGATGTCTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457465.3 ENST00000612371.5 ENST00000667400.1 |
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| CDS CAA 72 bp | ATAGCACTTGTAAGAATAATATGCCTGGGAATAAATTaGTTCAAGAAGGTGCCGTACTTGTACACAGACAAC | + |
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Preference number: 6 (lower is better) Translates to: IALVRIICLGIN*FKKVPYLYTDN Trigger: GTTGTCTGTGTACAAGTACGGCACCTTCTTGAACAAATTTATTCCCAGGCATATTATTCTTACAAGTGCTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664959.1 ENST00000667400.1 ENST00000667626.1 |
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