Pregenerated sensors for LINC01715 (Homo sapiens)
Ensembl gene IDs: ENSG00000229388Ensembl transcript IDs: ENST00000420776.1, ENST00000427804.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGAATGTGCTGGCGGGCACCGAGGGAGTGGCGGGGAAGAGCGGCTaGGCGAGCGAGGGAGGAACCGCTCCTTCCGGTTGCAGTAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: GNVLAGTEGVAGKSG*ASEGGTAPSGCSKC Trigger: GCACTTACTGCAACCGGAAGGAGCGGTTCCTCCCTCGCTCGCGCAGCCGCTCTTCCCCGCCACTCCCTCGGTGCCCGCCAGCACATTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS CCA 90 bp | TATACTCAGGGCTTGCTGGGAATGTGCTGGCGGGCACCGAGGGAGTaGCGGGGAAGAGCGGCTGCGCGAGCGAGGGAGGAACCGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: YTQGLLGMCWRAPRE*RGRAAARAREEPLL Trigger: AAGGAGCGGTTCCTCCCTCGCTCGCGCAGCCGCTCTTCCCCGCCACTCCCTCGGTGCCCGCCAGCACATTCCCAGCAAGCCCTGAGTATA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS CCA 90 bp | AGTGAGTTGATATGCAAATATACTCAGGGCTTGCTGGGAATGTGCTaGCGGGCACCGAGGGAGTGGCGGGGAAGAGCGGCTGCGCGAGCG | + |
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Preference number: 5 (lower is better) Translates to: SELICKYTQGLLGMC*RAPREWRGRAAARA Trigger: CGCTCGCGCAGCCGCTCTTCCCCGCCACTCCCTCGGTGCCCGCCAGCACATTCCCAGCAAGCCCTGAGTATATTTGCATATCAACTCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS GCA 90 bp | GGGAAGAGCGGCTGCGCGAGCGAGGGAGGAACCGCTCCTTCCGGTTaGAGTAAGTGCTGGGTCTTTCTTGTCAACTGCTCACGACAGAAG | + |
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Preference number: 5 (lower is better) Translates to: GKSGCASEGGTAPSG*SKCWVFLVNCSRQK Trigger: CTTCTGTCGTGAGCAGTTGACAAGAAAGACCCAGCACTTACTGCAACCGGAAGGAGCGGTTCCTCCCTCGCTCGCGCAGCCGCTCTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS GCA 90 bp | GGCTGCGCGAGCGAGGGAGGAACCGCTCCTTCCGGTTGCAGTAAGTaGTGGGTCTTTCTTGTCAACTGCTCACGACAGAAGGCGTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: GCASEGGTAPSGCSK*WVFLVNCSRQKASH Trigger: ATGAGACGCCTTCTGTCGTGAGCAGTTGACAAGAAAGACCCAGCACTTACTGCAACCGGAAGGAGCGGTTCCTCCCTCGCTCGCGCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS GCA 90 bp | TGTAGTGAGTTGATATGCAAATATACTCAGGGCTTGCTGGGAATGTaGTGGCGGGCACCGAGGGAGTGGCGGGGAAGAGCGGCTGCGCGA | + |
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Preference number: 5 (lower is better) Translates to: CSELICKYTQGLLGM*WRAPREWRGRAAAR Trigger: TCGCGCAGCCGCTCTTCCCCGCCACTCCCTCGGTGCCCGCCAGCACATTCCCAGCAAGCCCTGAGTATATTTGCATATCAACTCACTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS CCA 90 bp | TGCGCGAGCGAGGGAGGAACCGCTCCTTCCGGTTGCAGTAAGTGCTaGGTCTTTCTTGTCAACTGCTCACGACAGAAGGCGTCTCATGGC | + |
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Preference number: 5 (lower is better) Translates to: CASEGGTAPSGCSKC*VFLVNCSRQKASHG Trigger: GCCATGAGACGCCTTCTGTCGTGAGCAGTTGACAAGAAAGACCCAGCACTTACTGCAACCGGAAGGAGCGGTTCCTCCCTCGCTCGCGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS GCA 90 bp | ACCGCTCCTTCCGGTTGCAGTAAGTGCTGGGTCTTTCTTGTCAACTaGTCACGACAGAAGGCGTCTCATGGCGTTGGAATACCGGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: TAPSGCSKCWVFLVN*SRQKASHGVGIPAL Trigger: GAGAGCCGGTATTCCAACGCCATGAGACGCCTTCTGTCGTGAGCAGTTGACAAGAAAGACCCAGCACTTACTGCAACCGGAAGGAGCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS CCA 90 bp | GCAGCGTCGGGAAGAAAAGCTAGTGAAGGATTCTTAACGCCGGGTTaGAATACGCAGAGCTCGCTCATGCTGCCACTCAACCACAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: AASGRKASEGFLTPG*NTQSSLMLPLNHKQ Trigger: CTGCTTGTGGTTGAGTGGCAGCATGAGCGAGCTCTGCGTATTCCAACCCGGCGTTAAGAATCCTTCACTAGCTTTTCTTCCCGACGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420776.1 |
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| CDS TCA 90 bp | ACAGGATACCTGTGGGGTAATGTGTCCCAGATGATATCCCAGTCCTaGCACCAAGACAAAGGCACCAACCAAAAATGGCGACCTCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: TGYLWGNVSQMISQS*HQDKGTNQKWRPQS Trigger: GCTTTGAGGTCGCCATTTTTGGTTGGTGCCTTTGTCTTGGTGTCAGGACTGGGATATCATCTGGGACACATTACCCCACAGGTATCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420776.1 |
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| CDS TCA 90 bp | CTCGTTGAGGTCCAACAGGATACCTGTGGGGTAATGTGTCCCAGATaGTATCCCAGTCCTGACACCAAGACAAAGGCACCAACCAAAAAT | + |
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Preference number: 5 (lower is better) Translates to: LVEVQQDTCGVMCPR*YPSPDTKTKAPTKN Trigger: ATTTTTGGTTGGTGCCTTTGTCTTGGTGTCAGGACTGGGATATCATCTGGGACACATTACCCCACAGGTATCCTGTTGGACCTCAACGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420776.1 |
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| CDS TCA 90 bp | CTTTATTTCAACTTCCTGAAGTTGAAGAGCGAATTCCATTTCTTCTaGACTGAAAGGAAGACTTCACAAGGAGAATCTGGAATTTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: LYFNFLKLKSEFHFF*TERKTSQGESGICP Trigger: AGGACAAATTCCAGATTCTCCTTGTGAAGTCTTCCTTTCAGTTCAGAAGAAATGGAATTCGCTCTTCAACTTCAGGAAGTTGAAATAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS GCA 72 bp | CTGGCGGGCACCGAGGGAGTGGCGGGGAAGAGCGGCTaGGCGAGCGAGGGAGGAACCGCTCCTTCCGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: LAGTEGVAGKSG*ASEGGTAPSGC Trigger: GCAACCGGAAGGAGCGGTTCCTCCCTCGCTCGCGCAGCCGCTCTTCCCCGCCACTCCCTCGGTGCCCGCCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS CCA 72 bp | GGCTTGCTGGGAATGTGCTGGCGGGCACCGAGGGAGTaGCGGGGAAGAGCGGCTGCGCGAGCGAGGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: GLLGMCWRAPRE*RGRAAARAREE Trigger: TTCCTCCCTCGCTCGCGCAGCCGCTCTTCCCCGCCACTCCCTCGGTGCCCGCCAGCACATTCCCAGCAAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS CCA 72 bp | ATATGCAAATATACTCAGGGCTTGCTGGGAATGTGCTaGCGGGCACCGAGGGAGTGGCGGGGAAGAGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: ICKYTQGLLGMC*RAPREWRGRAA Trigger: AGCCGCTCTTCCCCGCCACTCCCTCGGTGCCCGCCAGCACATTCCCAGCAAGCCCTGAGTATATTTGCATAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS GCA 72 bp | TTGATATGCAAATATACTCAGGGCTTGCTGGGAATGTaGTGGCGGGCACCGAGGGAGTGGCGGGGAAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: LICKYTQGLLGM*WRAPREWRGRA Trigger: CGCTCTTCCCCGCCACTCCCTCGGTGCCCGCCAGCACATTCCCAGCAAGCCCTGAGTATATTTGCATATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS CCA 72 bp | GAGGGAGGAACCGCTCCTTCCGGTTGCAGTAAGTGCTaGGTCTTTCTTGTCAACTGCTCACGACAGAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: EGGTAPSGCSKC*VFLVNCSRQKA Trigger: CGCCTTCTGTCGTGAGCAGTTGACAAGAAAGACCCAGCACTTACTGCAACCGGAAGGAGCGGTTCCTCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS CAA 72 bp | CCGCTCCTTCCGGTTGCAGTAAGTGCTGGGTCTTTCTaGTCAACTGCTCACGACAGAAGGCGTCTCATGGCG | + |
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Preference number: 6 (lower is better) Translates to: PLLPVAVSAGSF*STAHDRRRLMA Trigger: CGCCATGAGACGCCTTCTGTCGTGAGCAGTTGACAAGAAAGACCCAGCACTTACTGCAACCGGAAGGAGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS GCA 72 bp | AGCGAGGGAGGAACCGCTCCTTCCGGTTGCAGTAAGTaGTGGGTCTTTCTTGTCAACTGCTCACGACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SEGGTAPSGCSK*WVFLVNCSRQK Trigger: CTTCTGTCGTGAGCAGTTGACAAGAAAGACCCAGCACTTACTGCAACCGGAAGGAGCGGTTCCTCCCTCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS CAA 90 bp | AGGGAGGAACCGCTCCTTCCGGTTGCAGTAAGTGCTGGGTCTTTCTaGTCAACTGCTCACGACAGAAGGCGTCTCATGGCGTTGGAATAC | + |
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Preference number: 6 (lower is better) Translates to: REEPLLPVAVSAGSF*STAHDRRRLMALEY Trigger: GTATTCCAACGCCATGAGACGCCTTCTGTCGTGAGCAGTTGACAAGAAAGACCCAGCACTTACTGCAACCGGAAGGAGCGGTTCCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS CAA 72 bp | TTGTCAACTGCTCACGACAGAAGGCGTCTCATGGCGTaGGAATACCGGCTCTCAGCGGCTGTAGGTATCGAT | + |
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Preference number: 6 (lower is better) Translates to: LSTAHDRRRLMA*EYRLSAAVGID Trigger: ATCGATACCTACAGCCGCTGAGAGCCGGTATTCCAACGCCATGAGACGCCTTCTGTCGTGAGCAGTTGACAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420776.1 |
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| CDS CAA 90 bp | GGGTCTTTCTTGTCAACTGCTCACGACAGAAGGCGTCTCATGGCGTaGGAATACCGGCTCTCAGCGGCTGTAGGTATCGATCTCTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: GSFLSTAHDRRRLMA*EYRLSAAVGIDLSH Trigger: ATGAGAGAGATCGATACCTACAGCCGCTGAGAGCCGGTATTCCAACGCCATGAGACGCCTTCTGTCGTGAGCAGTTGACAAGAAAGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420776.1 |
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| CDS TCA 72 bp | GTCCAACAGGATACCTGTGGGGTAATGTGTCCCAGATaGTATCCCAGTCCTGACACCAAGACAAAGGCACCA | + |
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Preference number: 6 (lower is better) Translates to: VQQDTCGVMCPR*YPSPDTKTKAP Trigger: TGGTGCCTTTGTCTTGGTGTCAGGACTGGGATATCATCTGGGACACATTACCCCACAGGTATCCTGTTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420776.1 |
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| CDS GCA 72 bp | TCCGGTTGCAGTAAGTGCTGGGTCTTTCTTGTCAACTaGTCACGACAGAAGGCGTCTCATGGCGTTGGAATA | + |
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Preference number: 6 (lower is better) Translates to: SGCSKCWVFLVN*SRQKASHGVGI Trigger: TATTCCAACGCCATGAGACGCCTTCTGTCGTGAGCAGTTGACAAGAAAGACCCAGCACTTACTGCAACCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS CCA 72 bp | GGAAGAAAAGCTAGTGAAGGATTCTTAACGCCGGGTTaGAATACGCAGAGCTCGCTCATGCTGCCACTCAAC | + |
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Preference number: 6 (lower is better) Translates to: GRKASEGFLTPG*NTQSSLMLPLN Trigger: GTTGAGTGGCAGCATGAGCGAGCTCTGCGTATTCCAACCCGGCGTTAAGAATCCTTCACTAGCTTTTCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420776.1 |
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| CDS CAA 72 bp | AAATGTAGTGAGTTGATATGCAAATATACTCAGGGCTaGCTGGGAATGTGCTGGCGGGCACCGAGGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: KCSELICKYTQG*LGMCWRAPREW Trigger: CCACTCCCTCGGTGCCCGCCAGCACATTCCCAGCAAGCCCTGAGTATATTTGCATATCAACTCACTACATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420776.1 ENST00000427804.1 |
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| CDS TCA 72 bp | CTGTGGGGTAATGTGTCCCAGATGATATCCCAGTCCTaGCACCAAGACAAAGGCACCAACCAAAAATGGCGA | + |
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Preference number: 6 (lower is better) Translates to: LWGNVSQMISQS*HQDKGTNQKWR Trigger: TCGCCATTTTTGGTTGGTGCCTTTGTCTTGGTGTCAGGACTGGGATATCATCTGGGACACATTACCCCACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420776.1 |
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