Pregenerated sensors for LINC01714 (Homo sapiens)
Ensembl gene IDs: ENSG00000227634Ensembl transcript IDs: ENST00000452982.1, ENST00000635451.1, ENST00000670361.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGCCGGGGAAGCTGCTGGCTTCTCGGGCTTTTGTAGTCATGGGTTaGCCACCGAAGCCCAAGGCCAACTGTCACCTACTCCAAGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: EPGKLLASRAFVVMG*PPKPKANCHLLQVL Trigger: CAAGACTTGGAGTAGGTGACAGTTGGCCTTGGGCTTCGGTGGCCAACCCATGACTACAAAAGCCCGAGAAGCCAGCAGCTTCCCCGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000452982.1 ENST00000635451.1 ENST00000670361.1 |
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| CDS TCA 90 bp | TTTCATCTCCGCACACACCTGTCAAAGCACAGGGCAGAGCACCCTTaGCAGGACCTCACCAGGACCTTATGCAGGCAGGGGACACGCTGT | + |
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Preference number: 5 (lower is better) Translates to: FHLRTHLSKHRAEHP*QDLTRTLCRQGTRC Trigger: ACAGCGTGTCCCCTGCCTGCATAAGGTCCTGGTGAGGTCCTGTCAAGGGTGCTCTGCCCTGTGCTTTGACAGGTGTGTGCGGAGATGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635451.1 ENST00000670361.1 |
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| CDS GCA 90 bp | GTAAATAATAACGATAGAATCGGGTTGAGGAATGGCAGCCACCCCTaGAGCAGCTCCTCTGACGGCTCTCAGCCCAGTGCCGAGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: VNNNDRIGLRNGSHP*SSSSDGSQPSAEPR Trigger: CCTGGGCTCGGCACTGGGCTGAGAGCCGTCAGAGGAGCTGCTGCAGGGGTGGCTGCCATTCCTCAACCCGATTCTATCGTTATTATTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635451.1 |
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| CDS TCA 90 bp | AGGACCTCACCAGGACCTTATGCAGGCAGGGGACACGCTGTCTTCTaGGTCAGGTCTTTCCATTTTTGGATGGCTCTGACTAAGAGAATT | + |
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Preference number: 5 (lower is better) Translates to: RTSPGPYAGRGHAVF*VRSFHFWMALTKRI Trigger: AATTCTCTTAGTCAGAGCCATCCAAAAATGGAAAGACCTGACTCAGAAGACAGCGTGTCCCCTGCCTGCATAAGGTCCTGGTGAGGTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000635451.1 ENST00000670361.1 |
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| CDS GCA 90 bp | CAAATTAAGAGAAACAGACTCAGAAGGCACGGGAAGGAACGTCGATaGTATCAGAAAAGCCAGATTCCACATAAATCCTCCTGGACGGGC | + |
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Preference number: 5 (lower is better) Translates to: QIKRNRLRRHGKERR*YQKSQIPHKSSWTG Trigger: GCCCGTCCAGGAGGATTTATGTGGAATCTGGCTTTTCTGATAGCATCGACGTTCCTTCCCGTGCCTTCTGAGTCTGTTTCTCTTAATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452982.1 ENST00000635451.1 ENST00000670361.1 |
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| CDS TCA 90 bp | TCCATGGATAAGTTCCTCCTTGTCCTTCAGTGTCCTGTTCAACACTaGGTCCAGCGAAGAGCAGAGACCACAGTCAAATTAAGAGAAACA | + |
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Preference number: 5 (lower is better) Translates to: SMDKFLLVLQCPVQH*VQRRAETTVKLRET Trigger: TGTTTCTCTTAATTTGACTGTGGTCTCTGCTCTTCGCTGGACTCAGTGTTGAACAGGACACTGAAGGACAAGGAGGAACTTATCCATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452982.1 |
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| CDS TCA 90 bp | ATGAGTAAGTTCTTTGTGATTTGTGAGATTCTGGTGCAGAATTTGTaGCATCTCCCCCTACCCCCTCCATGGATAAGTTCCTCCTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: MSKFFVICEILVQNL*HLPLPPPWISSSLS Trigger: GGACAAGGAGGAACTTATCCATGGAGGGGGTAGGGGGAGATGTCACAAATTCTGCACCAGAATCTCACAAATCACAAAGAACTTACTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000452982.1 |
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| CDS TCA 90 bp | ATGAGTAAGTTCTTTGTGATTTGTGAGATTCTGGTGCAGAATTTGTaGCATCTCCCTGAGTCCAGCGAAGAGCAGAGACCACAGTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: MSKFFVICEILVQNL*HLPESSEEQRPQSN Trigger: ATTTGACTGTGGTCTCTGCTCTTCGCTGGACTCAGGGAGATGTCACAAATTCTGCACCAGAATCTCACAAATCACAAAGAACTTACTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635451.1 ENST00000670361.1 |
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| CDS CCA 72 bp | GCAGAGGACAAGCTTCCCCATCACCCAGAGGCCACTTaGTGGAGGAGCCGGGGAAGCTGCTGGCTTCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: AEDKLPHHPEAT*WRSRGSCWLLG Trigger: CCCGAGAAGCCAGCAGCTTCCCCGGCTCCTCCACCAAGTGGCCTCTGGGTGATGGGGAAGCTTGTCCTCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000452982.1 ENST00000635451.1 ENST00000670361.1 |
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| CDS CCA 72 bp | GAGGACAAGCTTCCCCATCACCCAGAGGCCACTTGGTaGAGGAGCCGGGGAAGCTGCTGGCTTCTCGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: EDKLPHHPEATW*RSRGSCWLLGL Trigger: AAGCCCGAGAAGCCAGCAGCTTCCCCGGCTCCTCCACCAAGTGGCCTCTGGGTGATGGGGAAGCTTGTCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000452982.1 ENST00000635451.1 ENST00000670361.1 |
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| CDS TCA 72 bp | CGCACACACCTGTCAAAGCACAGGGCAGAGCACCCTTaGCAGGACCTCACCAGGACCTTATGCAGGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: RTHLSKHRAEHP*QDLTRTLCRQG Trigger: CCCCTGCCTGCATAAGGTCCTGGTGAGGTCCTGTCAAGGGTGCTCTGCCCTGTGCTTTGACAGGTGTGTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635451.1 ENST00000670361.1 |
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| CDS GCA 72 bp | AACGATAGAATCGGGTTGAGGAATGGCAGCCACCCCTaGAGCAGCTCCTCTGACGGCTCTCAGCCCAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: NDRIGLRNGSHP*SSSSDGSQPSA Trigger: GGCACTGGGCTGAGAGCCGTCAGAGGAGCTGCTGCAGGGGTGGCTGCCATTCCTCAACCCGATTCTATCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635451.1 |
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| CDS CAA 90 bp | GGAGCCGGGGAAGCTGCTGGCTTCTCGGGCTTTTGTAGTCATGGGTaGGCCACCGAAGCCCAAGGCCAACTGTCACCTACTCCAAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: GAGEAAGFSGFCSHG*ATEAQGQLSPTPSL Trigger: AAGACTTGGAGTAGGTGACAGTTGGCCTTGGGCTTCGGTGGCCAACCCATGACTACAAAAGCCCGAGAAGCCAGCAGCTTCCCCGGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000452982.1 ENST00000635451.1 ENST00000670361.1 |
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| CDS CAA 90 bp | CTTTCATCTCCGCACACACCTGTCAAAGCACAGGGCAGAGCACCCTaGACAGGACCTCACCAGGACCTTATGCAGGCAGGGGACACGCTG | + |
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Preference number: 6 (lower is better) Translates to: LSSPHTPVKAQGRAP*TGPHQDLMQAGDTL Trigger: CAGCGTGTCCCCTGCCTGCATAAGGTCCTGGTGAGGTCCTGTCAAGGGTGCTCTGCCCTGTGCTTTGACAGGTGTGTGCGGAGATGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635451.1 ENST00000670361.1 |
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| CDS CCA 72 bp | AAGCTGCTGGCTTCTCGGGCTTTTGTAGTCATGGGTTaGCCACCGAAGCCCAAGGCCAACTGTCACCTACTC | + |
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Preference number: 6 (lower is better) Translates to: KLLASRAFVVMG*PPKPKANCHLL Trigger: GAGTAGGTGACAGTTGGCCTTGGGCTTCGGTGGCCAACCCATGACTACAAAAGCCCGAGAAGCCAGCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452982.1 ENST00000635451.1 ENST00000670361.1 |
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| CDS CAA 72 bp | GAAGCTGCTGGCTTCTCGGGCTTTTGTAGTCATGGGTaGGCCACCGAAGCCCAAGGCCAACTGTCACCTACT | + |
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Preference number: 6 (lower is better) Translates to: EAAGFSGFCSHG*ATEAQGQLSPT Trigger: AGTAGGTGACAGTTGGCCTTGGGCTTCGGTGGCCAACCCATGACTACAAAAGCCCGAGAAGCCAGCAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452982.1 ENST00000635451.1 ENST00000670361.1 |
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| CDS CAA 90 bp | ACGGGCTCTCCAGGCCGATGCGTTGGGATGCTGACTTTTAGAGTTTaGTGTGTGACAAAGCAGAGGACAAGCTTCCCCATCACCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: TGSPGRCVGMLTFRV*CVTKQRTSFPITQR Trigger: CCTCTGGGTGATGGGGAAGCTTGTCCTCTGCTTTGTCACACACAAAACTCTAAAAGTCAGCATCCCAACGCATCGGCCTGGAGAGCCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000452982.1 ENST00000635451.1 ENST00000670361.1 |
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| CDS CAA 72 bp | CATCTCCCCCTACCCCCTCCATGGATAAGTTCCTCCTaGTCCTTCAGTGTCCTGTTCAACACTGAGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: HLPLPPPWISSS*SFSVLFNTESS Trigger: GCTGGACTCAGTGTTGAACAGGACACTGAAGGACAAGGAGGAACTTATCCATGGAGGGGGTAGGGGGAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000452982.1 |
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| CDS TCA 72 bp | CCAGGACCTTATGCAGGCAGGGGACACGCTGTCTTCTaGGTCAGGTCTTTCCATTTTTGGATGGCTCTGACT | + |
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Preference number: 6 (lower is better) Translates to: PGPYAGRGHAVF*VRSFHFWMALT Trigger: AGTCAGAGCCATCCAAAAATGGAAAGACCTGACTCAGAAGACAGCGTGTCCCCTGCCTGCATAAGGTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000635451.1 ENST00000670361.1 |
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| CDS TCA 72 bp | CGAAGCCCAAGGCCAACTGTCACCTACTCCAAGTCTTaGCATCCTCATCTTTCATCTCCGCACACACCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RSPRPTVTYSKS*HPHLSSPHTPV Trigger: GACAGGTGTGTGCGGAGATGAAAGATGAGGATGTCAAGACTTGGAGTAGGTGACAGTTGGCCTTGGGCTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635451.1 ENST00000670361.1 |
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| CDS GCA 72 bp | CCACATAAATCCTCCTGGACGGGCTCTCCAGGCCGATaGGTTGGGATGCTGACTTTTAGAGTTTTGTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: PHKSSWTGSPGR*VGMLTFRVLCV Trigger: CACACACAAAACTCTAAAAGTCAGCATCCCAACGCATCGGCCTGGAGAGCCCGTCCAGGAGGATTTATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000452982.1 ENST00000635451.1 ENST00000670361.1 |
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| CDS CAA 72 bp | CCGAAGCCCAAGGCCAACTGTCACCTACTCCAAGTCTaGACATCCTCATCTTTCATCTCCGCACACACCTGT | + |
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Preference number: 6 (lower is better) Translates to: PKPKANCHLLQV*TSSSFISAHTC Trigger: ACAGGTGTGTGCGGAGATGAAAGATGAGGATGTCAAGACTTGGAGTAGGTGACAGTTGGCCTTGGGCTTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635451.1 ENST00000670361.1 |
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| CDS TCA 72 bp | AAGTTCCTCCTTGTCCTTCAGTGTCCTGTTCAACACTaGGTCCAGCGAAGAGCAGAGACCACAGTCAAATTA | + |
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Preference number: 6 (lower is better) Translates to: KFLLVLQCPVQH*VQRRAETTVKL Trigger: TAATTTGACTGTGGTCTCTGCTCTTCGCTGGACTCAGTGTTGAACAGGACACTGAAGGACAAGGAGGAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452982.1 |
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| CDS GCA 72 bp | AGAAACAGACTCAGAAGGCACGGGAAGGAACGTCGATaGTATCAGAAAAGCCAGATTCCACATAAATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: RNRLRRHGKERR*YQKSQIPHKSS Trigger: GGAGGATTTATGTGGAATCTGGCTTTTCTGATAGCATCGACGTTCCTTCCCGTGCCTTCTGAGTCTGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452982.1 ENST00000635451.1 ENST00000670361.1 |
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| CDS TCA 72 bp | TTCTTTGTGATTTGTGAGATTCTGGTGCAGAATTTGTaGCATCTCCCCCTACCCCCTCCATGGATAAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: FFVICEILVQNL*HLPLPPPWISS Trigger: GGAACTTATCCATGGAGGGGGTAGGGGGAGATGTCACAAATTCTGCACCAGAATCTCACAAATCACAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000452982.1 |
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| CDS TCA 72 bp | GCCGAGCCCAGGCTGCAAAGACCTTTGAGTTCCATTTaGAAAATACCAAGCTCTTACTTCTCTGCTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: AEPRLQRPLSSI*KIPSSYFSASF Trigger: AAAGGAAGCAGAGAAGTAAGAGCTTGGTATTTTTCAAATGGAACTCAAAGGTCTTTGCAGCCTGGGCTCGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635451.1 |
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| CDS TCA 72 bp | TCTTCTGAGTCAGGTCTTTCCATTTTTGGATGGCTCTaGCTAAGAGAATTCCTCCTGTGTTCCGCCAAAATC | + |
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Preference number: 6 (lower is better) Translates to: SSESGLSIFGWL*LREFLLCSAKI Trigger: GATTTTGGCGGAACACAGGAGGAATTCTCTTAGTCAGAGCCATCCAAAAATGGAAAGACCTGACTCAGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000635451.1 ENST00000670361.1 |
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