Pregenerated sensors for LINC01707 (Homo sapiens)
Ensembl gene IDs: ENSG00000223883Ensembl transcript IDs: ENST00000425517.1, ENST00000658427.1, ENST00000660251.1, ENST00000661832.1, ENST00000664718.1, ENST00000667299.1, ENST00000667473.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCGGGCGGATCACGAGGTCAGGAGATCATCCTGGCTAGAGTGGCGTaGACCCAGGAGATGGAGCTTGCAGTGAGCCGAGTTTGTGCCACT | + |
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Preference number: 5 (lower is better) Translates to: AGGSRGQEIILARVA*TQEMELAVSRVCAT Trigger: AGTGGCACAAACTCGGCTCACTGCAAGCTCCATCTCCTGGGTTCACGCCACTCTAGCCAGGATGATCTCCTGACCTCGTGATCCGCCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000660251.1 ENST00000661832.1 ENST00000667473.1 |
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| CDS TCA 90 bp | CAGGCAGCTTCCCCAGTAGGTTGGCTGATGACCAAGCAAACTGTGTaGGCCACTGGGAGTGCTGCTTTGAGAGGAAAGCAGGCTACAGCC | + |
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Preference number: 5 (lower is better) Translates to: QAASPVGWLMTKQTV*ATGSAALRGKQATA Trigger: GGCTGTAGCCTGCTTTCCTCTCAAAGCAGCACTCCCAGTGGCTCACACAGTTTGCTTGGTCATCAGCCAACCTACTGGGGAAGCTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS TCA 90 bp | CTGGGAGTGCTGATTGGTCAGGTAGGAGATGAAATCATAGGGAACTaGAGCTGTGCTCTTGCACTGAGTCAGTTCCTGGGTGGGGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: LGVLIGQVGDEIIGN*SCALALSQFLGGGH Trigger: GTGGCCCCCACCCAGGAACTGACTCAGTGCAAGAGCACAGCTTCAGTTCCCTATGATTTCATCTCCTACCTGACCAATCAGCACTCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664718.1 |
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| CDS CCA 90 bp | CATAGGGAACTGAAGCTGTGCTCTTGCACTGAGTCAGTTCCTGGGTaGGGGCCACAAGAGCAGATGTGCCAGTTTATCCATCTGGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: HRELKLCSCTESVPG*GPQEQMCQFIHLGG Trigger: ACCACCCAGATGGATAAACTGGCACATCTGCTCTTGTGGCCCCCACCCAGGAACTGACTCAGTGCAAGAGCACAGCTTCAGTTCCCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664718.1 |
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| CDS CCA 90 bp | TTCCTGGGTGGGGGCCACAAGAGCAGATGTGCCAGTTTATCCATCTaGGTGGTGCCAGCTGATCCATCAAACACAGGAAAATATCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: FLGGGHKSRCASLSI*VVPADPSNTGKYPP Trigger: TGGCGGATATTTTCCTGTGTTTGATGGATCAGCTGGCACCACCCAGATGGATAAACTGGCACATCTGCTCTTGTGGCCCCCACCCAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664718.1 |
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| CDS CCA 90 bp | TTCCCCAGTAGGTTGGCTGATGACCAAGCAAACTGTGTGAGCCACTaGGAGTGCTGCTTTGAGAGGAAAGCAGGCTACAGCCTAAATGCC | + |
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Preference number: 5 (lower is better) Translates to: FPSRLADDQANCVSH*ECCFERKAGYSLNA Trigger: GGCATTTAGGCTGTAGCCTGCTTTCCTCTCAAAGCAGCACTCCCAGTGGCTCACACAGTTTGCTTGGTCATCAGCCAACCTACTGGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS GCA 90 bp | GGGGCAATTCAAGGGCTCCGTGGATCTGGTGCAACCATGTACAGTTaGAGTAGACAGTCTTCCAGATCGTTGGGTGCTCTTTCAAACCAG | + |
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Preference number: 5 (lower is better) Translates to: GAIQGLRGSGATMYS*SRQSSRSLGALSNQ Trigger: CTGGTTTGAAAGAGCACCCAACGATCTGGAAGACTGTCTACTGCAACTGTACATGGTTGCACCAGATCCACGGAGCCCTTGAATTGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS GCA 90 bp | GTGGGGGCCACAAGAGCAGATGTGCCAGTTTATCCATCTGGGTGGTaGCAGCTGATCCATCAAACACAGGAAAATATCCGCCAAATATCG | + |
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Preference number: 5 (lower is better) Translates to: VGATRADVPVYPSGW*QLIHQTQENIRQIS Trigger: CGATATTTGGCGGATATTTTCCTGTGTTTGATGGATCAGCTGGCACCACCCAGATGGATAAACTGGCACATCTGCTCTTGTGGCCCCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664718.1 |
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| CDS CCA 90 bp | TGGGTGGGGGCCACAAGAGCAGATGTGCCAGTTTATCCATCTGGGTaGTGCCAGCTGATCCATCAAACACAGGAAAATATCCGCCAAATA | + |
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Preference number: 5 (lower is better) Translates to: WVGATRADVPVYPSG*CQLIHQTQENIRQI Trigger: TATTTGGCGGATATTTTCCTGTGTTTGATGGATCAGCTGGCACCACCCAGATGGATAAACTGGCACATCTGCTCTTGTGGCCCCCACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664718.1 |
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| CDS TCA 90 bp | AACCAAGCCATGAAGTTGTGTGGCTACTGTTGGCTCAAGGGAAACTaGAATATGAGCGTCTATCTGGGCACATTGCTCCCCAATCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: NQAMKLCGYCWLKGN*NMSVYLGTLLPNLE Trigger: CTCCAGATTGGGGAGCAATGTGCCCAGATAGACGCTCATATTTCAGTTTCCCTTGAGCCAACAGTAGCCACACAACTTCATGGCTTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS TCA 90 bp | TCCATCTACCATGTGTTAAGCACAGCTGCACACAGAACCAAGCAATaGAGGACACAGAACCAAGCCATGAAGTTGTGTGGCTACTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: SIYHVLSTAAHRTKQ*RTQNQAMKLCGYCW Trigger: CCAACAGTAGCCACACAACTTCATGGCTTGGTTCTGTGTCCTTCATTGCTTGGTTCTGTGTGCAGCTGTGCTTAACACATGGTAGATGGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS GCA 90 bp | GCCTGGGTCATTCTGGCTGAGGAAGGTGTCTATTCCTTTAATCTTTaGCTCCAGGAACAGGTAATAGTATTTCTGCACTCGACCACAGAC | + |
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Preference number: 5 (lower is better) Translates to: AWVILAEEGVYSFNL*LQEQVIVFLHSTTD Trigger: GTCTGTGGTCGAGTGCAGAAATACTATTACCTGTTCCTGGAGGCAAAGATTAAAGGAATAGACACCTTCCTCAGCCAGAATGACCCAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658427.1 ENST00000667473.1 |
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| CDS GCA 90 bp | TTAAATTCAAAAGACCTGAAGTCCTGCTTTCCTAGGCATAGGGTCTaGTCCTTAGCAGCTTCAAAGGGGGCTGTACTGGAGCAAGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: LNSKDLKSCFPRHRV*SLAASKGAVLEQEG Trigger: TCCTTCTTGCTCCAGTACAGCCCCCTTTGAAGCTGCTAAGGAGCAGACCCTATGCCTAGGAAAGCAGGACTTCAGGTCTTTTGAATTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS CCA 90 bp | TCTATGCAGTACAAGTCTTTGGTTTGGCCAGAGCTCAGTGCCCTGTaGACAAAGTACTCCATCCACAGATCTCAGCAGGCATCTGAAATT | + |
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Preference number: 5 (lower is better) Translates to: SMQYKSLVWPELSAL*TKYSIHRSQQASEI Trigger: AATTTCAGATGCCTGCTGAGATCTGTGGATGGAGTACTTTGTCCACAGGGCACTGAGCTCTGGCCAAACCAAAGACTTGTACTGCATAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660251.1 ENST00000661832.1 |
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| CDS GCA 90 bp | CCTATATACATTCGGGTATGCTCAGAAATGCTCCAGGCAGTTCCCTaGAGAGTCTCAGAAGAAATATGGCTCATCTGTAATCCCAGCACT | + |
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Preference number: 5 (lower is better) Translates to: PIYIRVCSEMLQAVP*RVSEEIWLICNPST Trigger: AGTGCTGGGATTACAGATGAGCCATATTTCTTCTGAGACTCTGCAGGGAACTGCCTGGAGCATTTCTGAGCATACCCGAATGTATATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660251.1 |
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| CDS CCA 90 bp | AAAGACAGAGGAAAACCCAGTAAGTCCTGTCTGTTCAGATTCTTCTaGGTTTCTGTAGAATTCCTTCCTCCTAGATATGGGCCAGGACCC | + |
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Preference number: 5 (lower is better) Translates to: KDRGKPSKSCLFRFF*VSVEFLPPRYGPGP Trigger: GGGTCCTGGCCCATATCTAGGAGGAAGGAATTCTACAGAAACCCAGAAGAATCTGAACAGACAGGACTTACTGGGTTTTCCTCTGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS TCA 90 bp | AAAGCCTCCCAGGCAAGAGGCAGAATGAACAATTTAACCAATCATTaGCTGCTTGAGTCCATTGTGGGAACGGAGAATAAGGCCATTGCA | + |
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Preference number: 5 (lower is better) Translates to: KASQARGRMNNLTNH*LLESIVGTENKAIA Trigger: TGCAATGGCCTTATTCTCCGTTCCCACAATGGACTCAAGCAGTCAATGATTGGTTAAATTGTTCATTCTGCCTCTTGCCTGGGAGGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS GCA 90 bp | ACAAAAAGAAGAGAGTTCCCAGCTATAGAGATTGAAGAACATCTATaGAGTACAAGTCTTTGGTTTGGCCAGAGCTCAGTGCCCTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: TKRREFPAIEIEEHL*STSLWFGQSSVPCG Trigger: TCCACAGGGCACTGAGCTCTGGCCAAACCAAAGACTTGTACTGCATAGATGTTCTTCAATCTCTATAGCTGGGAACTCTCTTCTTTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000660251.1 ENST00000661832.1 |
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| CDS TCA 90 bp | ATGGGCAAGCACTACAAAAAGAAGAGAGTTCCCAGCTATAGAGATTaGAGAACATCTATGCAGTACAAGTCTTTGGTTTGGCCAGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: MGKHYKKKRVPSYRD*RTSMQYKSLVWPEL Trigger: GAGCTCTGGCCAAACCAAAGACTTGTACTGCATAGATGTTCTTCAATCTCTATAGCTGGGAACTCTCTTCTTTTTGTAGTGCTTGCCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000660251.1 ENST00000661832.1 |
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| CDS GCA 90 bp | ATGGTGATCGTGTTTCTCAAAATGTATCCTATATACATTCGGGTATaGTCAGAAATGCTCCAGGCAGTTCCCTGCAGAGTCTCAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: MVIVFLKMYPIYIRV*SEMLQAVPCRVSEE Trigger: TTCTTCTGAGACTCTGCAGGGAACTGCCTGGAGCATTTCTGAGCATACCCGAATGTATATAGGATACATTTTGAGAAACACGATCACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000660251.1 ENST00000661832.1 ENST00000667473.1 |
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| CDS GCA 90 bp | TGTCTTTATCCTCCAGCCTCAGTAATTTGTTCAAGAGTGGGCACTTaGTTGAAGTCAGTTCAGAGCAAATTTGGACTTTCAAAGAACTGG | + |
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Preference number: 5 (lower is better) Translates to: CLYPPASVICSRVGT*LKSVQSKFGLSKNW Trigger: CCAGTTCTTTGAAAGTCCAAATTTGCTCTGAACTGACTTCAAGCAAGTGCCCACTCTTGAACAAATTACTGAGGCTGGAGGATAAAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000425517.1 ENST00000658427.1 ENST00000660251.1 ENST00000661832.1 ENST00000664718.1 ENST00000667299.1 ENST00000667473.1 |
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| CDS GCA 90 bp | TGTTTCTCAAAATGTATCCTATATACATTCGGGTATGCTCAGAAATaGTCCAGGCAGTTCCCTGCAGAGTCTCAGAAGAAATATGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: CFSKCILYTFGYAQK*SRQFPAESQKKYGS Trigger: TGAGCCATATTTCTTCTGAGACTCTGCAGGGAACTGCCTGGAGCATTTCTGAGCATACCCGAATGTATATAGGATACATTTTGAGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000660251.1 ENST00000661832.1 ENST00000667473.1 |
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| CDS GCA 90 bp | TTTAAGGGAGAAGAGAAAAGAGTGACCTTTCTAAGTTTAATGGCTTaGTTTGGGGAAAGGGTTCTAGTTTCTATGACCCACTCTAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: FKGEEKRVTFLSLMA*FGERVLVSMTHSRQ Trigger: TTGCCTAGAGTGGGTCATAGAAACTAGAACCCTTTCCCCAAAGCAAGCCATTAAACTTAGAAAGGTCACTCTTTTCTCTTCTCCCTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS CCA 90 bp | TTATTGATGTTACAACTGAGGTTTCACAGCCTGTTTAATGTTCCATaGCAGTCAGATTTTGTGCTTGATGCATGCTCACAGCAAAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: LLMLQLRFHSLFNVP*QSDFVLDACSQQKP Trigger: AGGCTTTTGCTGTGAGCATGCATCAAGCACAAAATCTGACTGCCATGGAACATTAAACAGGCTGTGAAACCTCAGTTGTAACATCAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS CCA 90 bp | TTTGCATTGGAACCTGTGGTCAAGCAATTAGTAACAGTTCTCAGTTaGTGTCCTTGTCTTAATGATCCACAAGTACAGAGAACTTTAGTG | + |
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Preference number: 5 (lower is better) Translates to: FALEPVVKQLVTVLS*CPCLNDPQVQRTLV Trigger: CACTAAAGTTCTCTGTACTTGTGGATCATTAAGACAAGGACACCAACTGAGAACTGTTACTAATTGCTTGACCACAGGTTCCAATGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS TCA 90 bp | TTAGTGAGGAGGCTCCAGAAAGAATTCTGCTCTTGGATAGTAACTTaGCAATCAAACCTGAGAATTATTAGGAAAGAGAATAGCCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: LVRRLQKEFCSWIVT*QSNLRIIRKENSQS Trigger: GCTTTGGCTATTCTCTTTCCTAATAATTCTCAGGTTTGATTGTCAAGTTACTATCCAAGAGCAGAATTCTTTCTGGAGCCTCCTCACTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS CAA 90 bp | ATCGTTGGGTGCTCTTTCAAACCAGCAGGCAGCTTCCCCAGTAGGTaGGCTGATGACCAAGCAAACTGTGTGAGCCACTGGGAGTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: IVGCSFKPAGSFPSR*ADDQANCVSHWECC Trigger: GCAGCACTCCCAGTGGCTCACACAGTTTGCTTGGTCATCAGCCAACCTACTGGGGAAGCTGCCTGCTGGTTTGAAAGAGCACCCAACGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS TCA 72 bp | TCCCCAGTAGGTTGGCTGATGACCAAGCAAACTGTGTaGGCCACTGGGAGTGCTGCTTTGAGAGGAAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SPVGWLMTKQTV*ATGSAALRGKQ Trigger: CTGCTTTCCTCTCAAAGCAGCACTCCCAGTGGCTCACACAGTTTGCTTGGTCATCAGCCAACCTACTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS CCA 72 bp | AGGTTGGCTGATGACCAAGCAAACTGTGTGAGCCACTaGGAGTGCTGCTTTGAGAGGAAAGCAGGCTACAGC | + |
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Preference number: 6 (lower is better) Translates to: RLADDQANCVSH*ECCFERKAGYS Trigger: GCTGTAGCCTGCTTTCCTCTCAAAGCAGCACTCCCAGTGGCTCACACAGTTTGCTTGGTCATCAGCCAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS CAA 72 bp | TGCTCTTTCAAACCAGCAGGCAGCTTCCCCAGTAGGTaGGCTGATGACCAAGCAAACTGTGTGAGCCACTGG | + |
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Preference number: 6 (lower is better) Translates to: CSFKPAGSFPSR*ADDQANCVSHW Trigger: CCAGTGGCTCACACAGTTTGCTTGGTCATCAGCCAACCTACTGGGGAAGCTGCCTGCTGGTTTGAAAGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS GCA 72 bp | GATGACCAAGCAAACTGTGTGAGCCACTGGGAGTGCTaGTTTGAGAGGAAAGCAGGCTACAGCCTAAATGCC | + |
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Preference number: 6 (lower is better) Translates to: DDQANCVSHWEC*FERKAGYSLNA Trigger: GGCATTTAGGCTGTAGCCTGCTTTCCTCTCAAAGCAGCACTCCCAGTGGCTCACACAGTTTGCTTGGTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS CCA 72 bp | GGGGGCCACAAGAGCAGATGTGCCAGTTTATCCATCTaGGTGGTGCCAGCTGATCCATCAAACACAGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: GGHKSRCASLSI*VVPADPSNTGK Trigger: TTTTCCTGTGTTTGATGGATCAGCTGGCACCACCCAGATGGATAAACTGGCACATCTGCTCTTGTGGCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664718.1 |
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| CDS CCA 72 bp | CCATGTACAGTTGCAGTAGACAGTCTTCCAGATCGTTaGGTGCTCTTTCAAACCAGCAGGCAGCTTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PCTVAVDSLPDR*VLFQTSRQLPQ Trigger: CTGGGGAAGCTGCCTGCTGGTTTGAAAGAGCACCCAACGATCTGGAAGACTGTCTACTGCAACTGTACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS CAA 90 bp | TCTGGTGCAACCATGTACAGTTGCAGTAGACAGTCTTCCAGATCGTaGGGTGCTCTTTCAAACCAGCAGGCAGCTTCCCCAGTAGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: SGATMYSCSRQSSRS*GALSNQQAASPVGW Trigger: CCAACCTACTGGGGAAGCTGCCTGCTGGTTTGAAAGAGCACCCAACGATCTGGAAGACTGTCTACTGCAACTGTACATGGTTGCACCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS GCA 72 bp | GCTGATGACCAAGCAAACTGTGTGAGCCACTGGGAGTaGTGCTTTGAGAGGAAAGCAGGCTACAGCCTAAAT | + |
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Preference number: 6 (lower is better) Translates to: ADDQANCVSHWE*CFERKAGYSLN Trigger: ATTTAGGCTGTAGCCTGCTTTCCTCTCAAAGCAGCACTCCCAGTGGCTCACACAGTTTGCTTGGTCATCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS CCA 72 bp | TACAAGTCTTTGGTTTGGCCAGAGCTCAGTGCCCTGTaGACAAAGTACTCCATCCACAGATCTCAGCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: YKSLVWPELSAL*TKYSIHRSQQA Trigger: TGCCTGCTGAGATCTGTGGATGGAGTACTTTGTCCACAGGGCACTGAGCTCTGGCCAAACCAAAGACTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660251.1 ENST00000661832.1 |
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| CDS CAA 72 bp | ACCATGTACAGTTGCAGTAGACAGTCTTCCAGATCGTaGGGTGCTCTTTCAAACCAGCAGGCAGCTTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: TMYSCSRQSSRS*GALSNQQAASP Trigger: TGGGGAAGCTGCCTGCTGGTTTGAAAGAGCACCCAACGATCTGGAAGACTGTCTACTGCAACTGTACATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS TCA 72 bp | CCAAGCAAACTGTGTGAGCCACTGGGAGTGCTGCTTTaGGAGGAAAGCAGGCTACAGCCTAAATGCCATATA | + |
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Preference number: 6 (lower is better) Translates to: PSKLCEPLGVLL*EESRLQPKCHI Trigger: TATATGGCATTTAGGCTGTAGCCTGCTTTCCTCTCAAAGCAGCACTCCCAGTGGCTCACACAGTTTGCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS TCA 72 bp | CTGATTGGTCAGGTAGGAGATGAAATCATAGGGAACTaGAGCTGTGCTCTTGCACTGAGTCAGTTCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LIGQVGDEIIGN*SCALALSQFLG Trigger: ACCCAGGAACTGACTCAGTGCAAGAGCACAGCTTCAGTTCCCTATGATTTCATCTCCTACCTGACCAATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664718.1 |
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| CDS TCA 72 bp | ATGAAGTTGTGTGGCTACTGTTGGCTCAAGGGAAACTaGAATATGAGCGTCTATCTGGGCACATTGCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: MKLCGYCWLKGN*NMSVYLGTLLP Trigger: GGGGAGCAATGTGCCCAGATAGACGCTCATATTTCAGTTTCCCTTGAGCCAACAGTAGCCACACAACTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS GCA 72 bp | ACAAGAGCAGATGTGCCAGTTTATCCATCTGGGTGGTaGCAGCTGATCCATCAAACACAGGAAAATATCCGC | + |
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Preference number: 6 (lower is better) Translates to: TRADVPVYPSGW*QLIHQTQENIR Trigger: GCGGATATTTTCCTGTGTTTGATGGATCAGCTGGCACCACCCAGATGGATAAACTGGCACATCTGCTCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664718.1 |
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| CDS CCA 72 bp | GCCACAAGAGCAGATGTGCCAGTTTATCCATCTGGGTaGTGCCAGCTGATCCATCAAACACAGGAAAATATC | + |
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Preference number: 6 (lower is better) Translates to: ATRADVPVYPSG*CQLIHQTQENI Trigger: GATATTTTCCTGTGTTTGATGGATCAGCTGGCACCACCCAGATGGATAAACTGGCACATCTGCTCTTGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664718.1 |
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| CDS CAA 72 bp | GCCTGTTTAATGTTCCATGGCAGTCAGATTTTGTGCTaGATGCATGCTCACAGCAAAAGCCTCCCAGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: ACLMFHGSQILC*MHAHSKSLPGK Trigger: CTTGCCTGGGAGGCTTTTGCTGTGAGCATGCATCAAGCACAAAATCTGACTGCCATGGAACATTAAACAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS CAA 90 bp | GGTTTCACAGCCTGTTTAATGTTCCATGGCAGTCAGATTTTGTGCTaGATGCATGCTCACAGCAAAAGCCTCCCAGGCAAGAGGCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: GFTACLMFHGSQILC*MHAHSKSLPGKRQN Trigger: ATTCTGCCTCTTGCCTGGGAGGCTTTTGCTGTGAGCATGCATCAAGCACAAAATCTGACTGCCATGGAACATTAAACAGGCTGTGAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS CAA 90 bp | GCAATGAAGGACACAGAACCAAGCCATGAAGTTGTGTGGCTACTGTaGGCTCAAGGGAAACTGAAATATGAGCGTCTATCTGGGCACATT | + |
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Preference number: 6 (lower is better) Translates to: AMKDTEPSHEVVWLL*AQGKLKYERLSGHI Trigger: AATGTGCCCAGATAGACGCTCATATTTCAGTTTCCCTTGAGCCAACAGTAGCCACACAACTTCATGGCTTGGTTCTGTGTCCTTCATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS CCA 72 bp | GCTAATTTGTTAGTCCTACAACGGCATTCTAGTCCCTaGGCAAGAAGGAGGTTTGTTTTGGGAAAGGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: ANLLVLQRHSSP*ARRRFVLGKGC Trigger: ACAGCCCTTTCCCAAAACAAACCTCCTTCTTGCCCAGGGACTAGAATGCCGTTGTAGGACTAACAAATTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664718.1 |
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| CDS GCA 72 bp | ACATTTATAACTACAGCTCTCAGAGCTCTAAGCATGTaGCTAGACCTAAAACAGATCCAGCAGTGGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: TFITTALRALSM*LDLKQIQQWVH Trigger: GTGGACCCACTGCTGGATCTGTTTTAGGTCTAGGCACATGCTTAGAGCTCTGAGAGCTGTAGTTATAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS CAA 72 bp | AGATTGAAGAACATCTATGCAGTACAAGTCTTTGGTTaGGCCAGAGCTCAGTGCCCTGTGGACAAAGTACTC | + |
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Preference number: 6 (lower is better) Translates to: RLKNIYAVQVFG*ARAQCPVDKVL Trigger: GAGTACTTTGTCCACAGGGCACTGAGCTCTGGCCAAACCAAAGACTTGTACTGCATAGATGTTCTTCAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660251.1 ENST00000661832.1 |
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| CDS CAA 72 bp | GACACAGAACCAAGCCATGAAGTTGTGTGGCTACTGTaGGCTCAAGGGAAACTGAAATATGAGCGTCTATCT | + |
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Preference number: 6 (lower is better) Translates to: DTEPSHEVVWLL*AQGKLKYERLS Trigger: AGATAGACGCTCATATTTCAGTTTCCCTTGAGCCAACAGTAGCCACACAACTTCATGGCTTGGTTCTGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS CAA 90 bp | CAGAAGGATCAGCTGCATATCTCTCCCACAAATAAGACCAGCACATaGCCTATTGGAAGGAGATCAGTATATTTGAAGGAGTCAGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: QKDQLHISPTNKTST*PIGRRSVYLKESEP Trigger: AGGCTCTGACTCCTTCAAATATACTGATCTCCTTCCAATAGGCAATGTGCTGGTCTTATTTGTGGGAGAGATATGCAGCTGATCCTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS GCA 72 bp | CCTCCAGCCTCAGTAATTTGTTCAAGAGTGGGCACTTaGTTGAAGTCAGTTCAGAGCAAATTTGGACTTTCA | + |
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Preference number: 6 (lower is better) Translates to: PPASVICSRVGT*LKSVQSKFGLS Trigger: TGAAAGTCCAAATTTGCTCTGAACTGACTTCAAGCAAGTGCCCACTCTTGAACAAATTACTGAGGCTGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000425517.1 ENST00000658427.1 ENST00000660251.1 ENST00000661832.1 ENST00000664718.1 ENST00000667299.1 ENST00000667473.1 |
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| CDS CCA 72 bp | ATAGAGATTGAAGAACATCTATGCAGTACAAGTCTTTaGTTTGGCCAGAGCTCAGTGCCCTGTGGACAAAGT | + |
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Preference number: 6 (lower is better) Translates to: IEIEEHLCSTSL*FGQSSVPCGQS Trigger: ACTTTGTCCACAGGGCACTGAGCTCTGGCCAAACCAAAGACTTGTACTGCATAGATGTTCTTCAATCTCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660251.1 ENST00000661832.1 |
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| CDS CAA 72 bp | TCCTCCAGCCTCAGTAATTTGTTCAAGAGTGGGCACTaGCTTGAAGTCAGTTCAGAGCAAATTTGGACTTTC | + |
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Preference number: 6 (lower is better) Translates to: SSSLSNLFKSGH*LEVSSEQIWTF Trigger: GAAAGTCCAAATTTGCTCTGAACTGACTTCAAGCAAGTGCCCACTCTTGAACAAATTACTGAGGCTGGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000425517.1 ENST00000658427.1 ENST00000660251.1 ENST00000661832.1 ENST00000664718.1 ENST00000667299.1 ENST00000667473.1 |
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| CDS CAA 72 bp | GACTCCTTTAAGATGCAGAAGGCAGGTAATCCAAGTTaGGCCAATTTGTGTCTTTATCCTCCAGCCTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: DSFKMQKAGNPS*ANLCLYPPASV Trigger: TACTGAGGCTGGAGGATAAAGACACAAATTGGCCAAACTTGGATTACCTGCCTTCTGCATCTTAAAGGAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000425517.1 ENST00000658427.1 ENST00000660251.1 ENST00000667299.1 ENST00000667473.1 |
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| CDS CAA 72 bp | TACAACGGCATTCTAGTCCCTGGGCAAGAAGGAGGTTaGTTTTGGGAAAGGGCTGTTATTGCCTTTGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: YNGILVPGQEGG*FWERAVIAFVL Trigger: TAAAACAAAGGCAATAACAGCCCTTTCCCAAAACAAACCTCCTTCTTGCCCAGGGACTAGAATGCCGTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664718.1 |
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| CDS CAA 90 bp | GTTGGGACTGACTCCTTTAAGATGCAGAAGGCAGGTAATCCAAGTTaGGCCAATTTGTGTCTTTATCCTCCAGCCTCAGTAATTTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: VGTDSFKMQKAGNPS*ANLCLYPPASVICS Trigger: TGAACAAATTACTGAGGCTGGAGGATAAAGACACAAATTGGCCAAACTTGGATTACCTGCCTTCTGCATCTTAAAGGAGTCAGTCCCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000425517.1 ENST00000658427.1 ENST00000660251.1 ENST00000667299.1 ENST00000667473.1 |
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| CDS TCA 72 bp | AGAGAGCAGGAGAAGGTCAGAGAGAGATTTTGCTTTTaGGGCTTTCCCATCTCCTTTAGTTCAAAGTACTCA | + |
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Preference number: 6 (lower is better) Translates to: REQEKVRERFCF*GFPISFSSKYS Trigger: TGAGTACTTTGAACTAAAGGAGATGGGAAAGCCTCAAAAGCAAAATCTCTCTCTGACCTTCTCCTGCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS GCA 72 bp | ATTCTGGCTGAGGAAGGTGTCTATTCCTTTAATCTTTaGCTCCAGGAACAGGTAATAGTATTTCTGCACTCG | + |
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Preference number: 6 (lower is better) Translates to: ILAEEGVYSFNL*LQEQVIVFLHS Trigger: CGAGTGCAGAAATACTATTACCTGTTCCTGGAGGCAAAGATTAAAGGAATAGACACCTTCCTCAGCCAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658427.1 ENST00000667473.1 |
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| CDS GCA 72 bp | TTTCCACTGTTGGTTAAATGGATCAGAAGGATCAGCTaGATATCTCTCCCACAAATAAGACCAGCACATTGC | + |
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Preference number: 6 (lower is better) Translates to: FPLLVKWIRRIS*ISLPQIRPAHC Trigger: GCAATGTGCTGGTCTTATTTGTGGGAGAGATATGCAGCTGATCCTTCTGATCCATTTAACCAACAGTGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS CAA 72 bp | CCAGCCTCAGTAATTTGTTCAAGAGTGGGCACTTGCTaGAAGTCAGTTCAGAGCAAATTTGGACTTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: PASVICSRVGTC*KSVQSKFGLSK Trigger: CTTTGAAAGTCCAAATTTGCTCTGAACTGACTTCAAGCAAGTGCCCACTCTTGAACAAATTACTGAGGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000425517.1 ENST00000658427.1 ENST00000660251.1 ENST00000661832.1 ENST00000664718.1 ENST00000667299.1 ENST00000667473.1 |
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| CDS CAA 72 bp | TTCAGCTTTAAGATGCAGAAGGCAGGTAATCCAAGTTaGGCCAATTTGTGTCTTTATCCTCCAGCCTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: FSFKMQKAGNPS*ANLCLYPPASV Trigger: TACTGAGGCTGGAGGATAAAGACACAAATTGGCCAAACTTGGATTACCTGCCTTCTGCATCTTAAAGCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS CAA 72 bp | CAGCTGCATATCTCTCCCACAAATAAGACCAGCACATaGCCTATTGGAAGGAGATCAGTATATTTGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: QLHISPTNKTST*PIGRRSVYLKE Trigger: CTCCTTCAAATATACTGATCTCCTTCCAATAGGCAATGTGCTGGTCTTATTTGTGGGAGAGATATGCAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS CAA 90 bp | CTTTATCCTCCAGCCTCAGTAATTTGTTCAAGAGTGGGCACTTGCTaGAAGTCAGTTCAGAGCAAATTTGGACTTTCAAAGAACTGGACT | + |
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Preference number: 6 (lower is better) Translates to: LYPPASVICSRVGTC*KSVQSKFGLSKNWT Trigger: AGTCCAGTTCTTTGAAAGTCCAAATTTGCTCTGAACTGACTTCAAGCAAGTGCCCACTCTTGAACAAATTACTGAGGCTGGAGGATAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000425517.1 ENST00000658427.1 ENST00000660251.1 ENST00000661832.1 ENST00000664718.1 ENST00000667299.1 ENST00000667473.1 |
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| CDS CAA 90 bp | GTGTCTTTATCCTCCAGCCTCAGTAATTTGTTCAAGAGTGGGCACTaGCTTGAAGTCAGTTCAGAGCAAATTTGGACTTTCAAAGAACTG | + |
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Preference number: 6 (lower is better) Translates to: VSLSSSLSNLFKSGH*LEVSSEQIWTFKEL Trigger: CAGTTCTTTGAAAGTCCAAATTTGCTCTGAACTGACTTCAAGCAAGTGCCCACTCTTGAACAAATTACTGAGGCTGGAGGATAAAGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000425517.1 ENST00000658427.1 ENST00000660251.1 ENST00000661832.1 ENST00000664718.1 ENST00000667299.1 ENST00000667473.1 |
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| CDS CAA 90 bp | TCCAAGTTTGGCCAATTTGTGTCTTTATCCTCCAGCCTCAGTAATTaGTTCAAGAGTGGGCACTTGCTTGAAGTCAGTTCAGAGCAAATT | + |
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Preference number: 6 (lower is better) Translates to: SKFGQFVSLSSSLSN*FKSGHLLEVSSEQI Trigger: AATTTGCTCTGAACTGACTTCAAGCAAGTGCCCACTCTTGAACAAATTACTGAGGCTGGAGGATAAAGACACAAATTGGCCAAACTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000425517.1 ENST00000658427.1 ENST00000660251.1 ENST00000661832.1 ENST00000664718.1 ENST00000667299.1 ENST00000667473.1 |
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| CDS TCA 72 bp | TCTCCATCAGTGCCTTGCTCTTACTCAACCAAAAAGTaGATGCTGCCAGTAAAAGCAACCAGAGTAAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SPSVPCSYSTKK*MLPVKATRVSF Trigger: AAAACTTACTCTGGTTGCTTTTACTGGCAGCATTCACTTTTTGGTTGAGTAAGAGCAAGGCACTGATGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS GCA 72 bp | GAAGAGAAAAGAGTGACCTTTCTAAGTTTAATGGCTTaGTTTGGGGAAAGGGTTCTAGTTTCTATGACCCAC | + |
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Preference number: 6 (lower is better) Translates to: EEKRVTFLSLMA*FGERVLVSMTH Trigger: GTGGGTCATAGAAACTAGAACCCTTTCCCCAAAGCAAGCCATTAAACTTAGAAAGGTCACTCTTTTCTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS CCA 72 bp | AGTGGGCACTTGCTTGAAGTCAGTTCAGAGCAAATTTaGACTTTCAAAGAACTGGACTTGAAGGAAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SGHLLEVSSEQI*TFKELDLKERR Trigger: TCTTCTTTCCTTCAAGTCCAGTTCTTTGAAAGTCCAAATTTGCTCTGAACTGACTTCAAGCAAGTGCCCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000425517.1 ENST00000658427.1 ENST00000661832.1 ENST00000664718.1 ENST00000667299.1 ENST00000667473.1 |
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| CDS CCA 72 bp | GAACCTGTGGTCAAGCAATTAGTAACAGTTCTCAGTTaGTGTCCTTGTCTTAATGATCCACAAGTACAGAGA | + |
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Preference number: 6 (lower is better) Translates to: EPVVKQLVTVLS*CPCLNDPQVQR Trigger: TCTCTGTACTTGTGGATCATTAAGACAAGGACACCAACTGAGAACTGTTACTAATTGCTTGACCACAGGTTC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS CAA 72 bp | AGGCATCTGAAATTCTCATTTTCCTTCCACAATCAGTaGACAGGACCTGCCTCATTTTATCTTCACAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: RHLKFSFSFHNQ*TGPASFYLHSN Trigger: GTTGCTGTGAAGATAAAATGAGGCAGGTCCTGTCAACTGATTGTGGAAGGAAAATGAGAATTTCAGATGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000660251.1 ENST00000661832.1 |
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| CDS CAA 90 bp | CATCCACATTTCAGCTTTAAGATGCAGAAGGCAGGTAATCCAAGTTaGGCCAATTTGTGTCTTTATCCTCCAGCCTCAGTAATTTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: HPHFSFKMQKAGNPS*ANLCLYPPASVICS Trigger: TGAACAAATTACTGAGGCTGGAGGATAAAGACACAAATTGGCCAAACTTGGATTACCTGCCTTCTGCATCTTAAAGCTGAAATGTGGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661832.1 |
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| CDS CAA 90 bp | ACAAATAAGACCAGCACATTGCCTATTGGAAGGAGATCAGTATATTaGAAGGAGTCAGAGCCTCTCAGGTCTGCTTTTAAGAAAACAAAG | + |
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Preference number: 6 (lower is better) Translates to: TNKTSTLPIGRRSVY*KESEPLRSAFKKTK Trigger: CTTTGTTTTCTTAAAAGCAGACCTGAGAGGCTCTGACTCCTTCAAATATACTGATCTCCTTCCAATAGGCAATGTGCTGGTCTTATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS TCA 72 bp | ACCTATGAGCTATTATTGTGGCTAGAACATAGCGTGTaGGATCACATGCTTTACCCTTCCTCTGAAATTTCA | + |
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Preference number: 6 (lower is better) Translates to: TYELLLWLEHSV*DHMLYPSSEIS Trigger: TGAAATTTCAGAGGAAGGGTAAAGCATGTGATCTCACACGCTATGTTCTAGCCACAATAATAGCTCATAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS CAA 72 bp | ATTATCTTTAAGATGCAGAAGGCAGGTAATCCAAGTTaGGCCAATTTGTGTCTTTATCCTCCAGCCTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: IIFKMQKAGNPS*ANLCLYPPASV Trigger: TACTGAGGCTGGAGGATAAAGACACAAATTGGCCAAACTTGGATTACCTGCCTTCTGCATCTTAAAGATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664718.1 |
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| CDS TCA 72 bp | CACTACAAAAAGAAGAGAGTTCCCAGCTATAGAGATTaGAGAACATCTATGCAGTACAAGTCTTTGGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: HYKKKRVPSYRD*RTSMQYKSLVW Trigger: CCAAACCAAAGACTTGTACTGCATAGATGTTCTTCAATCTCTATAGCTGGGAACTCTCTTCTTTTTGTAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000660251.1 ENST00000661832.1 |
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| CDS TCA 72 bp | CTCAGTCCTAATTTTGCAAAGGCGGTTTCACCCAGATaGACATTAAATGTCTTCTACTTCAAAGTACTTGAG | + |
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Preference number: 6 (lower is better) Translates to: LSPNFAKAVSPR*TLNVFYFKVLE Trigger: CTCAAGTACTTTGAAGTAGAAGACATTTAATGTTCATCTGGGTGAAACCGCCTTTGCAAAATTAGGACTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664718.1 |
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| CDS CAA 72 bp | TTTATATTTCTTAATGTTCTCCTCTCCATCAGTGCCTaGCTCTTACTCAACCAAAAAGTGAATGCTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: FIFLNVLLSISA*LLLNQKVNAAS Trigger: ACTGGCAGCATTCACTTTTTGGTTGAGTAAGAGCAAGGCACTGATGGAGAGGAGAACATTAAGAAATATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS CAA 72 bp | AACTTTAGTGAGGAGGCTCCAGAAAGAATTCTGCTCTaGGATAGTAACTTGACAATCAAACCTGAGAATTAT | + |
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Preference number: 6 (lower is better) Translates to: NFSEEAPERILL*DSNLTIKPENY Trigger: ATAATTCTCAGGTTTGATTGTCAAGTTACTATCCAAGAGCAGAATTCTTTCTGGAGCCTCCTCACTAAAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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| CDS TCA 72 bp | ATGTTACAACTGAGGTTTCACAGCCATAAGCTATGGTaGTCGTGTTTCTCAAAATGTATCCTATATACATTC | + |
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Preference number: 6 (lower is better) Translates to: MLQLRFHSHKLW*SCFSKCILYTF Trigger: GAATGTATATAGGATACATTTTGAGAAACACGATCACCATAGCTTATGGCTGTGAAACCTCAGTTGTAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660251.1 ENST00000667473.1 |
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| CDS TCA 72 bp | AGGCTCCAGAAAGAATTCTGCTCTTGGATAGTAACTTaGCAATCAAACCTGAGAATTATTAGGAAAGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: RLQKEFCSWIVT*QSNLRIIRKEN Trigger: ATTCTCTTTCCTAATAATTCTCAGGTTTGATTGTCAAGTTACTATCCAAGAGCAGAATTCTTTCTGGAGCCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667299.1 |
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