Pregenerated sensors for LINC01705 (Homo sapiens)
Ensembl gene IDs: ENSG00000232679Ensembl transcript IDs: ENST00000438158.1, ENST00000658927.1, ENST00000668844.1
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCCTCTTGCCAGGGCCCCTCCAGCAGGCCAAGTCCCATATCCACCTaGTGGCTGCCCAGAGCTGCACACAGAGGACAAGAGCCCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSCQGPSSRPSPIST*WLPRAAHRGQEPSG Trigger: GCCAGAGGGCTCTTGTCCTCTGTGTGCAGCTCTGGGCAGCCAGCAGGTGGATATGGGACTTGGCCTGCTGGAGGGGCCCTGGCAAGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000438158.1 ENST00000658927.1 ENST00000668844.1 |
||
| CDS TCA 90 bp | GTGTCAGACCCCGACAAAGAGTGCGCACACGGGCATGAGTGGCTCTaGTGCAGGACGGCAGGACGGCATCAGCACCAGCCTGGACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSDPDKECAHGHEWL*CRTAGRHQHQPGLW Trigger: CCACAGTCCAGGCTGGTGCTGATGCCGTCCTGCCGTCCTGCATCAGAGCCACTCATGCCCGTGTGCGCACTCTTTGTCGGGGTCTGACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438158.1 |
||
| CDS TCA 90 bp | CGATGCAACGGTGTCAGACCCCGACAAAGAGTGCGCACACGGGCATaGGTGGCTCTGATGCAGGACGGCAGGACGGCATCAGCACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RCNGVRPRQRVRTRA*VALMQDGRTASAPA Trigger: GGCTGGTGCTGATGCCGTCCTGCCGTCCTGCATCAGAGCCACTCATGCCCGTGTGCGCACTCTTTGTCGGGGTCTGACACCGTTGCATCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438158.1 |
||
| CDS GCA 90 bp | TCCATCTCCCCGGGTTATAGTAGAAGGATCTTTGCCATCTGCTCCTaGCAGCTCCTCTTGCCAGGGCCCCTCCAGCAGGCCAAGTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SISPGYSRRIFAICS*QLLLPGPLQQAKSH Trigger: ATGGGACTTGGCCTGCTGGAGGGGCCCTGGCAAGAGGAGCTGGCAGGAGCAGATGGCAAAGATCCTTCTACTATAACCCGGGGAGATGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658927.1 |
||
| CDS GCA 90 bp | CTCCAGCAGGCCAAGTCCCATATCCACCTGCTGGCTGCCCAGAGCTaGACACAGAGGACAAGAGCCCTCTGGCTCATTCATTGTTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LQQAKSHIHLLAAQS*TQRTRALWLIHCSL Trigger: GAGTGAACAATGAATGAGCCAGAGGGCTCTTGTCCTCTGTGTGCAGCTCTGGGCAGCCAGCAGGTGGATATGGGACTTGGCCTGCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000438158.1 ENST00000658927.1 ENST00000668844.1 |
||
| CDS CCA 90 bp | CAAGATGTCAGCCAGAACTCCAGTCATCCGAAGGCTCATCTGGGGTaGGAGAATCTGCTTCCAAGATGGCTCACTCACATAGCTGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: QDVSQNSSHPKAHLG*ENLLPRWLTHIAVS Trigger: GCTAACAGCTATGTGAGTGAGCCATCTTGGAAGCAGATTCTCCCACCCCAGATGAGCCTTCGGATGACTGGAGTTCTGGCTGACATCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668844.1 |
||
| CDS CCA 90 bp | ATGAGTTATCCAGCTTCAGGTAGTGTGTATTTCAACAGTTCCGCATaGCTGTGGAGGCCTCACAATCATGGCAGAAGGCAAGGAGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: MSYPASGSVYFNSSA*LWRPHNHGRRQGGT Trigger: TGTTCCTCCTTGCCTTCTGCCATGATTGTGAGGCCTCCACAGCCATGCGGAACTGTTGAAATACACACTACCTGAAGCTGGATAACTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000438158.1 ENST00000668844.1 |
||
| CDS CCA 90 bp | TGTGTATTTCAACAGTTCCGCATGGCTGTGGAGGCCTCACAATCATaGCAGAAGGCAAGGAGGAACAAGTCACATCTTACATGGATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CVFQQFRMAVEASQS*QKARRNKSHLTWIA Trigger: TGCAATCCATGTAAGATGTGACTTGTTCCTCCTTGCCTTCTGCCATGATTGTGAGGCCTCCACAGCCATGCGGAACTGTTGAAATACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000438158.1 ENST00000668844.1 |
||
| CDS TCA 90 bp | TTCAACCATTCTCTACCTGTGCAAAGTACCCTCATGTTGTGTGAGTaGATTCCAAAGCCACTTTGTGACCTCTTCCGGCAAGGCCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FNHSLPVQSTLMLCE*IPKPLCDLFRQGQN Trigger: GTTTTGGCCTTGCCGGAAGAGGTCACAAAGTGGCTTTGGAATTCACTCACACAACATGAGGGTACTTTGCACAGGTAGAGAATGGTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658927.1 |
||
| CDS CCA 90 bp | CATATATTATCTCACACAGTTTCTGTAGGGTCAGGAATTTGGAAGTaGGGTAATTTTGGCTTGAGGTCTCTGATGAGATTGCAGTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: HILSHTVSVGSGIWK*GNFGLRSLMRLQSR Trigger: TCTTGACTGCAATCTCATCAGAGACCTCAAGCCAAAATTACCCCACTTCCAAATTCCTGACCCTACAGAAACTGTGTGAGATAATATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668844.1 |
||
| CDS CCA 90 bp | AATAAGCATATATTATCTCACACAGTTTCTGTAGGGTCAGGAATTTaGAAGTGGGGTAATTTTGGCTTGAGGTCTCTGATGAGATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NKHILSHTVSVGSGI*KWGNFGLRSLMRLQ Trigger: CTGCAATCTCATCAGAGACCTCAAGCCAAAATTACCCCACTTCCAAATTCCTGACCCTACAGAAACTGTGTGAGATAATATATGCTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668844.1 |
||
| CDS TCA 72 bp | CCCGACAAAGAGTGCGCACACGGGCATGAGTGGCTCTaGTGCAGGACGGCAGGACGGCATCAGCACCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PDKECAHGHEWL*CRTAGRHQHQP Trigger: AGGCTGGTGCTGATGCCGTCCTGCCGTCCTGCATCAGAGCCACTCATGCCCGTGTGCGCACTCTTTGTCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438158.1 |
||
| CDS GCA 72 bp | CAGGGCCCCTCCAGCAGGCCAAGTCCCATATCCACCTaGTGGCTGCCCAGAGCTGCACACAGAGGACAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QGPSSRPSPIST*WLPRAAHRGQE Trigger: CTCTTGTCCTCTGTGTGCAGCTCTGGGCAGCCAGCAGGTGGATATGGGACTTGGCCTGCTGGAGGGGCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000438158.1 ENST00000658927.1 ENST00000668844.1 |
||
| CDS TCA 72 bp | GGTGTCAGACCCCGACAAAGAGTGCGCACACGGGCATaGGTGGCTCTGATGCAGGACGGCAGGACGGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: GVRPRQRVRTRA*VALMQDGRTAS Trigger: TGATGCCGTCCTGCCGTCCTGCATCAGAGCCACTCATGCCCGTGTGCGCACTCTTTGTCGGGGTCTGACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438158.1 |
||
| CDS CCA 72 bp | AGGACGGCAGGACGGCATCAGCACCAGCCTGGACTGTaGGGACACCAACAAGGGAGCGCTTTATCCTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RTAGRHQHQPGL*GHQQGSALSFA Trigger: GGCAAAGGATAAAGCGCTCCCTTGTTGGTGTCCCCACAGTCCAGGCTGGTGCTGATGCCGTCCTGCCGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438158.1 |
||
| CDS CCA 72 bp | CTGATGCAGGACGGCAGGACGGCATCAGCACCAGCCTaGACTGTGGGGACACCAACAAGGGAGCGCTTTATC | + |
|
Preference number: 6 (lower is better) Translates to: LMQDGRTASAPA*TVGTPTRERFI Trigger: GATAAAGCGCTCCCTTGTTGGTGTCCCCACAGTCCAGGCTGGTGCTGATGCCGTCCTGCCGTCCTGCATCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438158.1 |
||
| CDS GCA 72 bp | GCCAAGTCCCATATCCACCTGCTGGCTGCCCAGAGCTaGACACAGAGGACAAGAGCCCTCTGGCTCATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: AKSHIHLLAAQS*TQRTRALWLIH Trigger: ATGAATGAGCCAGAGGGCTCTTGTCCTCTGTGTGCAGCTCTGGGCAGCCAGCAGGTGGATATGGGACTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000438158.1 ENST00000658927.1 ENST00000668844.1 |
||
| CDS GCA 72 bp | ATCTCCCCGGGTTATAGTAGAAGGATCTTTGCCATCTaGTCCTGCCAGCTCCTCTTGCCAGGGCCCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ISPGYSRRIFAI*SCQLLLPGPLQ Trigger: CTGGAGGGGCCCTGGCAAGAGGAGCTGGCAGGAGCAGATGGCAAAGATCCTTCTACTATAACCCGGGGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658927.1 |
||
| CDS TCA 72 bp | CGTACCTTACCACATGGACCTCTGAATAGGGCTGCTTaGGTGTCCTCACAACAGGGAAGCCAGTGTCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RTLPHGPLNRAA*VSSQQGSQCLP Trigger: TGGGAGACACTGGCTTCCCTGTTGTGAGGACACTCAAGCAGCCCTATTCAGAGGTCCATGTGGTAAGGTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668844.1 |
||
| CDS CCA 72 bp | ATGTCAGCCAGAACTCCAGTCATCCGAAGGCTCATCTaGGGTGGGAGAATCTGCTTCCAAGATGGCTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: MSARTPVIRRLI*GGRICFQDGSL Trigger: GAGTGAGCCATCTTGGAAGCAGATTCTCCCACCCCAGATGAGCCTTCGGATGACTGGAGTTCTGGCTGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668844.1 |
||
| CDS CCA 72 bp | AGCCAGAACTCCAGTCATCCGAAGGCTCATCTGGGGTaGGAGAATCTGCTTCCAAGATGGCTCACTCACATA | + |
|
Preference number: 6 (lower is better) Translates to: SQNSSHPKAHLG*ENLLPRWLTHI Trigger: TATGTGAGTGAGCCATCTTGGAAGCAGATTCTCCCACCCCAGATGAGCCTTCGGATGACTGGAGTTCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668844.1 |
||
| CDS GCA 72 bp | TTGAGCACTGACCATGACAACACAGGTGATATACGATaGAACGGTGTCAGACCCCGACAAAGAGTGCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: LSTDHDNTGDIR*NGVRPRQRVRT Trigger: TGTGCGCACTCTTTGTCGGGGTCTGACACCGTTGCATCGTATATCACCTGTGTTGTCATGGTCAGTGCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438158.1 |
||
| CDS CCA 72 bp | CAACAGTTCCGCATGGCTGTGGAGGCCTCACAATCATaGCAGAAGGCAAGGAGGAACAAGTCACATCTTACA | + |
|
Preference number: 6 (lower is better) Translates to: QQFRMAVEASQS*QKARRNKSHLT Trigger: TGTAAGATGTGACTTGTTCCTCCTTGCCTTCTGCCATGATTGTGAGGCCTCCACAGCCATGCGGAACTGTTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000438158.1 ENST00000668844.1 |
||
| CDS CCA 72 bp | CCAGCTTCAGGTAGTGTGTATTTCAACAGTTCCGCATaGCTGTGGAGGCCTCACAATCATGGCAGAAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PASGSVYFNSSA*LWRPHNHGRRQ Trigger: TTGCCTTCTGCCATGATTGTGAGGCCTCCACAGCCATGCGGAACTGTTGAAATACACACTACCTGAAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000438158.1 ENST00000668844.1 |
||
| CDS CCA 72 bp | AAGGCTCATCTGGGGTGGGAGAATCTGCTTCCAAGATaGCTCACTCACATAGCTGTTAGCAAGAAACCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: KAHLGWENLLPR*LTHIAVSKKPR Trigger: CCTAGGTTTCTTGCTAACAGCTATGTGAGTGAGCCATCTTGGAAGCAGATTCTCCCACCCCAGATGAGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668844.1 |
||
| CDS GCA 72 bp | TTCCTTACGGCAGAGTTAGTCGTTCCAACAAAAGGATaGCCCAAACAGATGTTCTCCATCTCCCCGGGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: FLTAELVVPTKG*PKQMFSISPGY Trigger: ATAACCCGGGGAGATGGAGAACATCTGTTTGGGGCATCCTTTTGTTGGAACGACTAACTCTGCCGTAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658927.1 |
||
| CDS CAA 90 bp | GGAATTTGGAAGTGGGGTAATTTTGGCTTGAGGTCTCTGATGAGATaGCAGTCAAGATGTCAGCCAGAACTCCAGTCATCCGAAGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GIWKWGNFGLRSLMR*QSRCQPELQSSEGS Trigger: TGAGCCTTCGGATGACTGGAGTTCTGGCTGACATCTTGACTGCAATCTCATCAGAGACCTCAAGCCAAAATTACCCCACTTCCAAATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668844.1 |
||
| CDS TCA 72 bp | TCTCTACCTGTGCAAAGTACCCTCATGTTGTGTGAGTaGATTCCAAAGCCACTTTGTGACCTCTTCCGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SLPVQSTLMLCE*IPKPLCDLFRQ Trigger: TTGCCGGAAGAGGTCACAAAGTGGCTTTGGAATTCACTCACACAACATGAGGGTACTTTGCACAGGTAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658927.1 |
||
| CDS CAA 72 bp | AAGTGGGGTAATTTTGGCTTGAGGTCTCTGATGAGATaGCAGTCAAGATGTCAGCCAGAACTCCAGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: KWGNFGLRSLMR*QSRCQPELQSS Trigger: GGATGACTGGAGTTCTGGCTGACATCTTGACTGCAATCTCATCAGAGACCTCAAGCCAAAATTACCCCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668844.1 |
||
| CDS TCA 72 bp | TCTGGCTCATTCATTGTTCACTCTACTCTTCCATCTTaGAGATTCTTAGGCTTAGGTCCTCAGGACACCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SGSFIVHSTLPS*RFLGLGPQDTN Trigger: GTTGGTGTCCTGAGGACCTAAGCCTAAGAATCTTCAAGATGGAAGAGTAGAGTGAACAATGAATGAGCCAGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000438158.1 ENST00000658927.1 ENST00000668844.1 |
||
| CDS CCA 72 bp | TCTCACACAGTTTCTGTAGGGTCAGGAATTTGGAAGTaGGGTAATTTTGGCTTGAGGTCTCTGATGAGATTG | + |
|
Preference number: 6 (lower is better) Translates to: SHTVSVGSGIWK*GNFGLRSLMRL Trigger: CAATCTCATCAGAGACCTCAAGCCAAAATTACCCCACTTCCAAATTCCTGACCCTACAGAAACTGTGTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668844.1 |
||
| CDS GCA 72 bp | CTTCAGGTAGTGTGTATTTCAACCATTCTCTACCTGTaGAAAGTACCCTCATGTTGTGTGAGTGAATTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LQVVCISTILYL*KVPSCCVSEFQ Trigger: TTGGAATTCACTCACACAACATGAGGGTACTTTGCACAGGTAGAGAATGGTTGAAATACACACTACCTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658927.1 |
||
| CDS CCA 72 bp | ATATTATCTCACACAGTTTCTGTAGGGTCAGGAATTTaGAAGTGGGGTAATTTTGGCTTGAGGTCTCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: ILSHTVSVGSGI*KWGNFGLRSLM Trigger: CATCAGAGACCTCAAGCCAAAATTACCCCACTTCCAAATTCCTGACCCTACAGAAACTGTGTGAGATAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668844.1 |
||
| CDS CAA 90 bp | TGCTCACAATGGCACCATGATTTTAGTATCATGAGTAGAACCATTTaGCAGATGAAAAATCTAAGGCAGAGAGAATGGTTTAGCAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: CSQWHHDFSIMSRTI*QMKNLRQREWFSNL Trigger: CAAGTTGCTAAACCATTCTCTCTGCCTTAGATTTTTCATCTGCAAAATGGTTCTACTCATGATACTAAAATCATGGTGCCATTGTGAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658927.1 |
||
| CDS CAA 72 bp | TGGCACCATGATTTTAGTATCATGAGTAGAACCATTTaGCAGATGAAAAATCTAAGGCAGAGAGAATGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: WHHDFSIMSRTI*QMKNLRQREWF Trigger: AAACCATTCTCTCTGCCTTAGATTTTTCATCTGCAAAATGGTTCTACTCATGATACTAAAATCATGGTGCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658927.1 |
||