Pregenerated sensors for LINC01704 (Homo sapiens)
Ensembl gene IDs: ENSG00000231666Ensembl transcript IDs: ENST00000414848.2, ENST00000442358.6, ENST00000635685.1, ENST00000654630.1, ENST00000655195.1, ENST00000656134.1, ENST00000656498.1, ENST00000658278.1, ENST00000663787.1, ENST00000665549.1, ENST00000666137.1, ENST00000670135.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACACGAGGAGTTCATCATTCTTTCTGGCTGGCACTGAAGATTCTTTaGTGGGGCTCTGGCCCTGGTAGTTGGACTGCTGACCTGTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: TRGVHHSFWLALKIL*WGSGPGSWTADLWE Trigger: TTCCCACAGGTCAGCAGTCCAACTACCAGGGCCAGAGCCCCATCAAAGAATCTTCAGTGCCAGCCAGAAAGAATGATGAACTCCTCGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000414848.2 ENST00000635685.1 ENST00000655195.1 ENST00000656134.1 ENST00000656498.1 ENST00000658278.1 ENST00000663787.1 |
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| CDS TCA 90 bp | ACACGAGGAGTTCATCATTCTTTCTGGCTGGCACTGAAGATTCTTTaGTGGGGCTCTGGCCCTGGTAGTTGGACTGCTGACCACTCCACT | + |
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Preference number: 5 (lower is better) Translates to: TRGVHHSFWLALKIL*WGSGPGSWTADHST Trigger: AGTGGAGTGGTCAGCAGTCCAACTACCAGGGCCAGAGCCCCATCAAAGAATCTTCAGTGCCAGCCAGAAAGAATGATGAACTCCTCGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442358.6 |
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| CDS TCA 90 bp | ACACGAGGAGTTCATCATTCTTTCTGGCTGGCACTGAAGATTCTTTaGTGGGGCTCTGGCCCTGGTAGTTGGACTGCTGACCTACCACTC | + |
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Preference number: 5 (lower is better) Translates to: TRGVHHSFWLALKIL*WGSGPGSWTADLPL Trigger: GAGTGGTAGGTCAGCAGTCCAACTACCAGGGCCAGAGCCCCATCAAAGAATCTTCAGTGCCAGCCAGAAAGAATGATGAACTCCTCGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665549.1 ENST00000670135.1 |
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| CDS TCA 90 bp | ACACGAGGAGTTCATCATTCTTTCTGGCTGGCACTGAAGATTCTTTaGTGGGGCTCTGGCCCTGGTAGTTGGACTGCTGACCTTGATGAT | + |
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Preference number: 5 (lower is better) Translates to: TRGVHHSFWLALKIL*WGSGPGSWTADLDD Trigger: ATCATCAAGGTCAGCAGTCCAACTACCAGGGCCAGAGCCCCATCAAAGAATCTTCAGTGCCAGCCAGAAAGAATGATGAACTCCTCGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654630.1 ENST00000666137.1 |
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| CDS TCA 90 bp | CTTCATTTATGTCTAAAGAGAAAGAGTCTGGAAACTGAGTCACACTaGAGGGCCAGACAGCTTTGGCTCCCTCTAGTATCTTCAGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: LHLCLKRKSLETESH*RARQLWLPLVSSEQ Trigger: TTGCTCTGAAGATACTAGAGGGAGCCAAAGCTGTCTGGCCCTTCAGTGTGACTCAGTTTCCAGACTCTTTCTCTTTAGACATAAATGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000414848.2 ENST00000635685.1 ENST00000655195.1 ENST00000656134.1 ENST00000656498.1 ENST00000658278.1 ENST00000663787.1 |
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| CDS TCA 90 bp | TTGACTTGTTCTTCATTTATGTCTAAAGAGAAAGAGTCTGGAAACTaGGTCACACTGAAGGGCCAGACAGCTTTGGCTCCCTCTAGTATC | + |
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Preference number: 5 (lower is better) Translates to: LTCSSFMSKEKESGN*VTLKGQTALAPSSI Trigger: GATACTAGAGGGAGCCAAAGCTGTCTGGCCCTTCAGTGTGACTCAGTTTCCAGACTCTTTCTCTTTAGACATAAATGAAGAACAAGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000414848.2 ENST00000635685.1 ENST00000655195.1 ENST00000656134.1 ENST00000656498.1 ENST00000658278.1 ENST00000663787.1 |
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| CDS TCA 72 bp | TCCACTGGCTCACCTACCACTCCACTGAGGAAAAGCTaGCCACTGGTGAGGGCTGGCTGGCACCTCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: STGSPTTPLRKS*PLVRAGWHLWM Trigger: CATCCAGAGGTGCCAGCCAGCCCTCACCAGTGGTCAGCTTTTCCTCAGTGGAGTGGTAGGTGAGCCAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000414848.2 ENST00000635685.1 ENST00000655195.1 ENST00000656134.1 ENST00000656498.1 ENST00000658278.1 ENST00000663787.1 |
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| CDS CAA 90 bp | ATTGTGAGGCAGCCCTCAAGGCTCAAGGAAGCTTCCTGGGCAGGATaGAGTGTTGCCCGTACATGCCCCATGTGCACCACAAGTGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: IVRQPSRLKEASWAG*SVARTCPMCTTSEG Trigger: CCCCTCACTTGTGGTGCACATGGGGCATGTACGGGCAACACTCAATCCTGCCCAGGAAGCTTCCTTGAGCCTTGAGGGCTGCCTCACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000635685.1 ENST00000656134.1 ENST00000656498.1 |
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| CDS GCA 72 bp | GCTCACACTTCATTCAATGGTGGAGGAATGCCCAGCTaGTGTCCCATGGGGGTCTGGAGGTCTATGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: AHTSFNGGGMPS*CPMGVWRSMGT Trigger: GGTGCCCATAGACCTCCAGACCCCCATGGGACAGCAGCTGGGCATTCCTCCACCATTGAATGAAGTGTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658278.1 |
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| CDS CCA 72 bp | CACTCCACTGAGGAAAAGCTGACCACTGGTGAGGGCTaGCTGGCACCTCTGGATGACCTAGAGGGCTGTATC | + |
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Preference number: 6 (lower is better) Translates to: HSTEEKLTTGEG*LAPLDDLEGCI Trigger: GATACAGCCCTCTAGGTCATCCAGAGGTGCCAGCCAGCCCTCACCAGTGGTCAGCTTTTCCTCAGTGGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000414848.2 ENST00000442358.6 ENST00000635685.1 ENST00000655195.1 ENST00000656134.1 ENST00000656498.1 ENST00000658278.1 ENST00000663787.1 ENST00000665549.1 ENST00000670135.1 |
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| CDS CCA 72 bp | GGTGGAGGAATGCCCAGCTGCTGTCCCATGGGGGTCTaGAGGTCTATGGGCACCAACAGTACCATTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: GGGMPSCCPMGV*RSMGTNSTIST Trigger: TGTGGAAATGGTACTGTTGGTGCCCATAGACCTCCAGACCCCCATGGGACAGCAGCTGGGCATTCCTCCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658278.1 |
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| CDS TCA 72 bp | AGCCCTCAAGGCTCAAGGAAGCTTCCTGGGCAGGATTaGGTGTTGCCCGTACATGCCCCATGTGCACCACAA | + |
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Preference number: 6 (lower is better) Translates to: SPQGSRKLPGQD*VLPVHAPCAPQ Trigger: TTGTGGTGCACATGGGGCATGTACGGGCAACACTCAATCCTGCCCAGGAAGCTTCCTTGAGCCTTGAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000635685.1 ENST00000654630.1 ENST00000656134.1 ENST00000656498.1 |
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| CDS CCA 72 bp | ATAGGAGGCAGGCTGTGCCTCGAGTGTCATCTGGTTTaGAGGCCGAGGTCCCCACGTTTAAGTGACTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: IGGRLCLECHLV*RPRSPRLSDLL Trigger: AAGCAAGTCACTTAAACGTGGGGACCTCGGCCTCCAAACCAGATGACACTCGAGGCACAGCCTGCCTCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658278.1 |
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| CDS TCA 72 bp | GTTCATCATTCTTTCTGGCTGGCACTGAAGATTCTTTaGTGGGGCTCTGGCCCTGGTAGTTGGACTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: VHHSFWLALKIL*WGSGPGSWTAD Trigger: GTCAGCAGTCCAACTACCAGGGCCAGAGCCCCATCAAAGAATCTTCAGTGCCAGCCAGAAAGAATGATGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000414848.2 ENST00000442358.6 ENST00000635685.1 ENST00000654630.1 ENST00000655195.1 ENST00000656134.1 ENST00000656498.1 ENST00000658278.1 ENST00000663787.1 ENST00000665549.1 ENST00000666137.1 ENST00000670135.1 |
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| CDS CCA 72 bp | ACCAACCACTTAAACCTCAAATACCTGAGTCCTCCATaGACTCTGAACCAGGCCCTGAGTTTTCTCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: TNHLNLKYLSPP*TLNQALSFLTL Trigger: CAAGGTGAGAAAACTCAGGGCCTGGTTCAGAGTCCATGGAGGACTCAGGTATTTGAGGTTTAAGTGGTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663787.1 |
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| CDS CAA 90 bp | CAACAGAGTTCCAAGAGCGTCCCAGCTTCCAGTGTCTCTCATCCCTaGAGAGCATTTAATTTACATTTCTTAGGCCTGGCAGTGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: QQSSKSVPASSVSHP*RAFNLHFLGLAVSG Trigger: TCCAGACACTGCCAGGCCTAAGAAATGTAAATTAAATGCTCTCAAGGGATGAGAGACACTGGAAGCTGGGACGCTCTTGGAACTCTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000414848.2 ENST00000442358.6 ENST00000663787.1 ENST00000665549.1 ENST00000666137.1 |
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| CDS CAA 90 bp | TGGTTCCCTGTTTCAGGCATATTGGTTTCTTCTCCCCAACCAGACTaGGCTTCGCAGTGCCTTGTCTTTTGTATTCCTCTCTCATTGCCT | + |
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Preference number: 6 (lower is better) Translates to: WFPVSGILVSSPQPD*ASQCLVFCIPLSLP Trigger: AGGCAATGAGAGAGGAATACAAAAGACAAGGCACTGCGAAGCCAAGTCTGGTTGGGGAGAAGAAACCAATATGCCTGAAACAGGGAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000414848.2 ENST00000442358.6 ENST00000635685.1 ENST00000654630.1 ENST00000655195.1 ENST00000656134.1 ENST00000656498.1 ENST00000658278.1 ENST00000663787.1 ENST00000665549.1 ENST00000666137.1 ENST00000670135.1 |
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| CDS TCA 72 bp | TGTCTAAAGAGAAAGAGTCTGGAAACTGAGTCACACTaGAGGGCCAGACAGCTTTGGCTCCCTCTAGTATCT | + |
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Preference number: 6 (lower is better) Translates to: CLKRKSLETESH*RARQLWLPLVS Trigger: AGATACTAGAGGGAGCCAAAGCTGTCTGGCCCTTCAGTGTGACTCAGTTTCCAGACTCTTTCTCTTTAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000414848.2 ENST00000635685.1 ENST00000655195.1 ENST00000656134.1 ENST00000656498.1 ENST00000658278.1 ENST00000663787.1 |
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| CDS CCA 72 bp | CCCCATACTTGTCAGCAGTTTTGTCTGAGTCCTTTCTaGTTCCCTGTTTCAGGCATATTGGTTTCTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: PHTCQQFCLSPF*FPVSGILVSSP Trigger: GGGAGAAGAAACCAATATGCCTGAAACAGGGAACCAGAAAGGACTCAGACAAAACTGCTGACAAGTATGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000414848.2 ENST00000442358.6 ENST00000635685.1 ENST00000654630.1 ENST00000655195.1 ENST00000656134.1 ENST00000656498.1 ENST00000658278.1 ENST00000663787.1 ENST00000665549.1 ENST00000666137.1 ENST00000670135.1 |
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| CDS CAA 72 bp | TCCAAGAGCGTCCCAGCTTCCAGTGTCTCTCATCCCTaGAGAGCATTTAATTTACATTTCTTAGGCCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SKSVPASSVSHP*RAFNLHFLGLA Trigger: TGCCAGGCCTAAGAAATGTAAATTAAATGCTCTCAAGGGATGAGAGACACTGGAAGCTGGGACGCTCTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000414848.2 ENST00000442358.6 ENST00000663787.1 ENST00000665549.1 ENST00000666137.1 |
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| CDS CAA 72 bp | GTTTCAGGCATATTGGTTTCTTCTCCCCAACCAGACTaGGCTTCGCAGTGCCTTGTCTTTTGTATTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: VSGILVSSPQPD*ASQCLVFCIPL Trigger: GAGAGGAATACAAAAGACAAGGCACTGCGAAGCCAAGTCTGGTTGGGGAGAAGAAACCAATATGCCTGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000414848.2 ENST00000442358.6 ENST00000635685.1 ENST00000654630.1 ENST00000655195.1 ENST00000656134.1 ENST00000656498.1 ENST00000658278.1 ENST00000663787.1 ENST00000665549.1 ENST00000666137.1 ENST00000670135.1 |
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| CDS TCA 72 bp | CTGATAGTGGTGCTATCTACACTGAGACCTAAAGAATaGGGAGGAGCTAGCCACAGAAAGATGGGGAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LIVVLSTLRPKE*GGASHRKMGKR Trigger: TCTTTTCCCCATCTTTCTGTGGCTAGCTCCTCCTCATTCTTTAGGTCTCAGTGTAGATAGCACCACTATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000414848.2 ENST00000442358.6 ENST00000655195.1 ENST00000663787.1 ENST00000665549.1 ENST00000666137.1 ENST00000670135.1 |
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| CDS CAA 72 bp | TCCAAGAGCGTCCCAGCTTCCAGTGTCTCTCATCCCTaGAGAGCATTTAATTTACATTTAGGCAAGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: SKSVPASSVSHP*RAFNLHLGKQQ Trigger: TTGCTGCTTGCCTAAATGTAAATTAAATGCTCTCAAGGGATGAGAGACACTGGAAGCTGGGACGCTCTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654630.1 ENST00000656498.1 |
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| CDS CCA 72 bp | GGAACACTTTCTCTACATTGCTGGTGTTTTCTTTCTTaGGGCAGAAACCCTATTAAACAAACACTCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: GTLSLHCWCFLS*GRNPIKQTLLA Trigger: GGCCAGGAGTGTTTGTTTAATAGGGTTTCTGCCCCAAGAAAGAAAACACCAGCAATGTAGAGAAAGTGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663787.1 |
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| CDS CAA 90 bp | CCCACAACACATCATCCGCTGAACCAACCCTCAAAGGCATCAAGGTaGACTTGTTCTTCATTTATGTCTAAAGAGAAAGAGTCTGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: PTTHHPLNQPSKASR*TCSSFMSKEKESGN Trigger: GTTTCCAGACTCTTTCTCTTTAGACATAAATGAAGAACAAGTCAACCTTGATGCCTTTGAGGGTTGGTTCAGCGGATGATGTGTTGTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000414848.2 ENST00000635685.1 ENST00000655195.1 ENST00000656134.1 ENST00000656498.1 ENST00000658278.1 ENST00000663787.1 |
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| CDS CAA 72 bp | CATCATCCGCTGAACCAACCCTCAAAGGCATCAAGGTaGACTTGTTCTTCATTTATGTCTAAAGAGAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: HHPLNQPSKASR*TCSSFMSKEKE Trigger: CTCTTTCTCTTTAGACATAAATGAAGAACAAGTCAACCTTGATGCCTTTGAGGGTTGGTTCAGCGGATGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000414848.2 ENST00000635685.1 ENST00000655195.1 ENST00000656134.1 ENST00000656498.1 ENST00000658278.1 ENST00000663787.1 |
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