Pregenerated sensors for LINC01703 (Homo sapiens)
Ensembl gene IDs: ENSG00000225518Ensembl transcript IDs: ENST00000412855.2, ENST00000602806.1, ENST00000655338.1, ENST00000656201.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CATGGCTGGGCCAGGCGCTGGAGGCGGCCCTCACCCGTGGGACGGTaGCCCCCAGGCCCCGGGACGGAAAGGAGCTGCGGCGACGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: HGWARRWRRPSPVGR*PPGPGTERSCGDGG Trigger: CCCGCCGTCGCCGCAGCTCCTTTCCGTCCCGGGGCCTGGGGGGCACCGTCCCACGGGTGAGGGCCGCCTCCAGCGCCTGGCCCAGCCATG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602806.1 |
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| CDS TCA 90 bp | AGGAGCTGCGGCGACGGCGGGAGAGGGCCCTACCCCCGGCGAGGCTaGGGCCTCAGGAGCGGACCTCACTGCAGGCAGCCCGGGAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: RSCGDGGRGPYPRRG*GLRSGPHCRQPGRE Trigger: TTCCCTCCCGGGCTGCCTGCAGTGAGGTCCGCTCCTGAGGCCTCAGCCTCGCCGGGGGTAGGGCCCTCTCCCGCCGTCGCCGCAGCTCCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602806.1 |
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| CDS TCA 90 bp | AGGCAGCCCGGGAGGGAACGGCGGGGGAGTCCCGGGTCGTGGGGGTaGCCCAGCCAGGGCTGGCGGAGAAGGGCCCGTAAGGTCGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: RQPGRERRGSPGSWG*PSQGWRRRARKVGK Trigger: TTTGCCGACCTTACGGGCCCTTCTCCGCCAGCCCTGGCTGGGTCACCCCCACGACCCGGGACTCCCCCGCCGTTCCCTCCCGGGCTGCCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000602806.1 |
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| CDS TCA 90 bp | GACGGCATATGTACACTGGGCTCCAGCAGGCTCAGAAGGCACAAGTaGGCTGTGCGAGCAGGTGGCGCAGACTCCTTCGACAGCGATTCT | + |
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Preference number: 5 (lower is better) Translates to: DGICTLGSSRLRRHK*AVRAGGADSFDSDS Trigger: AGAATCGCTGTCGAAGGAGTCTGCGCCACCTGCTCGCACAGCTCACTTGTGCCTTCTGAGCCTGCTGGAGCCCAGTGTACATATGCCGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412855.2 ENST00000602806.1 ENST00000656201.1 |
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| CDS CCA 90 bp | GGGCTCCAGCAGGCTCAGAAGGCACAAGTGAGCTGTGCGAGCAGGTaGCGCAGACTCCTTCGACAGCGATTCTTGCCTTATTGCCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: GLQQAQKAQVSCASR*RRLLRQRFLPYCLF Trigger: AAACAGGCAATAAGGCAAGAATCGCTGTCGAAGGAGTCTGCGCCACCTGCTCGCACAGCTCACTTGTGCCTTCTGAGCCTGCTGGAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412855.2 ENST00000602806.1 ENST00000656201.1 |
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| CDS CCA 90 bp | CGTGCAGCAGCAATCTCTAATCACGCGGAGACGGCATATGTACACTaGGCTCCAGCAGGCTCAGAAGGCACAAGTGAGCTGTGCGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: RAAAISNHAETAYVH*APAGSEGTSELCEQ Trigger: CTGCTCGCACAGCTCACTTGTGCCTTCTGAGCCTGCTGGAGCCCAGTGTACATATGCCGTCTCCGCGTGATTAGAGATTGCTGCTGCACG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412855.2 ENST00000602806.1 ENST00000656201.1 |
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| CDS GCA 90 bp | TATGTACACTGGGCTCCAGCAGGCTCAGAAGGCACAAGTGAGCTGTaGGAGCAGGTGGCGCAGACTCCTTCGACAGCGATTCTTGCCTTA | + |
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Preference number: 5 (lower is better) Translates to: YVHWAPAGSEGTSEL*EQVAQTPSTAILAL Trigger: TAAGGCAAGAATCGCTGTCGAAGGAGTCTGCGCCACCTGCTCGCACAGCTCACTTGTGCCTTCTGAGCCTGCTGGAGCCCAGTGTACATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412855.2 ENST00000602806.1 ENST00000656201.1 |
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| CDS TCA 90 bp | CTGGCACCTTTCTACCTCCACCCTGTTGCTCAAGTTCCCTTTGTTTaGATTGCCCTCCCCATGTCCATCTATCCAAATTCTACCTTCAAT | + |
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Preference number: 5 (lower is better) Translates to: LAPFYLHPVAQVPFV*IALPMSIYPNSTFN Trigger: ATTGAAGGTAGAATTTGGATAGATGGACATGGGGAGGGCAATTCAAACAAAGGGAACTTGAGCAACAGGGTGGAGGTAGAAAGGTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655338.1 ENST00000656201.1 |
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| CDS CCA 90 bp | GTAAAGATTTGTTTGCAGACAGTTCAATCTGGAGGTGGGCAACAGTaGCTTGAGATAAGTAAGCTGCTTGGCTCCACGTGGTTATTCAGG | + |
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Preference number: 5 (lower is better) Translates to: VKICLQTVQSGGGQQ*LEISKLLGSTWLFR Trigger: CCTGAATAACCACGTGGAGCCAAGCAGCTTACTTATCTCAAGCCACTGTTGCCCACCTCCAGATTGAACTGTCTGCAAACAAATCTTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412855.2 |
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| CDS GCA 72 bp | GCCAGGCGCTGGAGGCGGCCCTCACCCGTGGGACGGTaGCCCCCAGGCCCCGGGACGGAAAGGAGCTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: ARRWRRPSPVGR*PPGPGTERSCG Trigger: GCCGCAGCTCCTTTCCGTCCCGGGGCCTGGGGGGCACCGTCCCACGGGTGAGGGCCGCCTCCAGCGCCTGGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602806.1 |
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| CDS GCA 72 bp | TTCCAAAGTGCCACGCTTCACCCACTCGGCAGGATATaGGGCACCTTCAGGGCCGCAGCTGCAGCTCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: FQSATLHPLGRI*GTFRAAAAARG Trigger: CCCGCGAGCTGCAGCTGCGGCCCTGAAGGTGCCGCATATCCTGCCGAGTGGGTGAAGCGTGGCACTTTGGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602806.1 |
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| CDS GCA 72 bp | CCGAGGTGGGCGGATCACCCGATTTGTTTTCCAAAGTaGCACGCTTCACCCACTCGGCAGGATATGCGGCAC | + |
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Preference number: 6 (lower is better) Translates to: PRWADHPICFPK*HASPTRQDMRH Trigger: GTGCCGCATATCCTGCCGAGTGGGTGAAGCGTGGCACTTTGGAAAACAAATCGGGTGATCCGCCCACCTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602806.1 |
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| CDS CCA 72 bp | CAGGCTCAGAAGGCACAAGTGAGCTGTGCGAGCAGGTaGCGCAGACTCCTTCGACAGCGATTCTTGCCTTAT | + |
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Preference number: 6 (lower is better) Translates to: QAQKAQVSCASR*RRLLRQRFLPY Trigger: ATAAGGCAAGAATCGCTGTCGAAGGAGTCTGCGCCACCTGCTCGCACAGCTCACTTGTGCCTTCTGAGCCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412855.2 ENST00000602806.1 ENST00000656201.1 |
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| CDS CCA 72 bp | CTCCTAGGGTATAGTCTTCATCTGCATGGTTGCAGCTaGAACACCACCCCGTTTGTGTTCCAGCCCCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LLGYSLHLHGCS*NTTPFVFQPRH Trigger: GTGGCGGGGCTGGAACACAAACGGGGTGGTGTTCCAGCTGCAACCATGCAGATGAAGACTATACCCTAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000412855.2 ENST00000655338.1 ENST00000656201.1 |
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| CDS CCA 72 bp | GCAATCTCTAATCACGCGGAGACGGCATATGTACACTaGGCTCCAGCAGGCTCAGAAGGCACAAGTGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: AISNHAETAYVH*APAGSEGTSEL Trigger: CAGCTCACTTGTGCCTTCTGAGCCTGCTGGAGCCCAGTGTACATATGCCGTCTCCGCGTGATTAGAGATTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412855.2 ENST00000602806.1 ENST00000656201.1 |
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| CDS CAA 72 bp | GCGAGCAGGTGGCGCAGACTCCTTCGACAGCGATTCTaGCCTTATTGCCTGTTTTCCTTCATTCCTAGGACC | + |
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Preference number: 6 (lower is better) Translates to: ASRWRRLLRQRF*PYCLFSFIPRT Trigger: GGTCCTAGGAATGAAGGAAAACAGGCAATAAGGCAAGAATCGCTGTCGAAGGAGTCTGCGCCACCTGCTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412855.2 ENST00000602806.1 ENST00000656201.1 |
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| CDS CAA 90 bp | GTGAGCTGTGCGAGCAGGTGGCGCAGACTCCTTCGACAGCGATTCTaGCCTTATTGCCTGTTTTCCTTCATTCCTAGGACCCGATTTGTT | + |
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Preference number: 6 (lower is better) Translates to: VSCASRWRRLLRQRF*PYCLFSFIPRTRFV Trigger: AACAAATCGGGTCCTAGGAATGAAGGAAAACAGGCAATAAGGCAAGAATCGCTGTCGAAGGAGTCTGCGCCACCTGCTCGCACAGCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412855.2 |
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| CDS CAA 90 bp | TTCTGCATCTCCCAAAAGATCTGGCACCTTTCTACCTCCACCCTGTaGCTCAAGTTCCCTTTGTTTGAATTGCCCTCCCCATGTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: FCISQKIWHLSTSTL*LKFPLFELPSPCPS Trigger: AGATGGACATGGGGAGGGCAATTCAAACAAAGGGAACTTGAGCAACAGGGTGGAGGTAGAAAGGTGCCAGATCTTTTGGGAGATGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655338.1 ENST00000656201.1 |
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| CDS GCA 72 bp | TGGCGCAGACTCCTTCGACAGCGATTCTTGCCTTATTaGCTGTTTTCCTTCATTCCTAGGACCCGATTTGTT | + |
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Preference number: 6 (lower is better) Translates to: WRRLLRQRFLPY*LFSFIPRTRFV Trigger: AACAAATCGGGTCCTAGGAATGAAGGAAAACAGGCAATAAGGCAAGAATCGCTGTCGAAGGAGTCTGCGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412855.2 |
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| CDS CAA 90 bp | TCTGGCACCTTTCTACCTCCACCCTGTTGCTCAAGTTCCCTTTGTTaGAATTGCCCTCCCCATGTCCATCTATCCAAATTCTACCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: SGTFLPPPCCSSSLC*NCPPHVHLSKFYLQ Trigger: TTGAAGGTAGAATTTGGATAGATGGACATGGGGAGGGCAATTCAAACAAAGGGAACTTGAGCAACAGGGTGGAGGTAGAAAGGTGCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655338.1 ENST00000656201.1 |
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| CDS CAA 90 bp | AAGATCTGGCACCTTTCTACCTCCACCCTGTTGCTCAAGTTCCCTTaGTTTGAATTGCCCTCCCCATGTCCATCTATCCAAATTCTACCT | + |
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Preference number: 6 (lower is better) Translates to: KIWHLSTSTLLLKFP*FELPSPCPSIQILP Trigger: AGGTAGAATTTGGATAGATGGACATGGGGAGGGCAATTCAAACAAAGGGAACTTGAGCAACAGGGTGGAGGTAGAAAGGTGCCAGATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655338.1 ENST00000656201.1 |
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| CDS GCA 72 bp | CCTCCACCCTGTTGCTCAAGTTCCCTTTGTTTGAATTaGCCTCCCCATGTCCATCTATCCAAATTCTACCTT | + |
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Preference number: 6 (lower is better) Translates to: PPPCCSSSLCLN*PPHVHLSKFYL Trigger: AAGGTAGAATTTGGATAGATGGACATGGGGAGGGCAATTCAAACAAAGGGAACTTGAGCAACAGGGTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655338.1 ENST00000656201.1 |
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| CDS CCA 72 bp | CAGTGGCTTGAGATAAGTAAGCTGCTTGGCTCCACGTaGTTATTCAGGAACCCAGGTTTCTTTCTTGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: QWLEISKLLGST*LFRNPGFFLVC Trigger: ACAGACAAGAAAGAAACCTGGGTTCCTGAATAACCACGTGGAGCCAAGCAGCTTACTTATCTCAAGCCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412855.2 ENST00000655338.1 ENST00000656201.1 |
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| CDS CAA 72 bp | ACCTCCACCCTGTTGCTCAAGTTCCCTTTGTTTGAATaGCCCTCCCCATGTCCATCTATCCAAATTCTACCT | + |
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Preference number: 6 (lower is better) Translates to: TSTLLLKFPLFE*PSPCPSIQILP Trigger: AGGTAGAATTTGGATAGATGGACATGGGGAGGGCAATTCAAACAAAGGGAACTTGAGCAACAGGGTGGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655338.1 ENST00000656201.1 |
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| CDS CAA 72 bp | TTTCTACCTCCACCCTGTTGCTCAAGTTCCCTTTGTTaGAATTGCCCTCCCCATGTCCATCTATCCAAATTC | + |
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Preference number: 6 (lower is better) Translates to: FLPPPCCSSSLC*NCPPHVHLSKF Trigger: GAATTTGGATAGATGGACATGGGGAGGGCAATTCAAACAAAGGGAACTTGAGCAACAGGGTGGAGGTAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655338.1 ENST00000656201.1 |
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| CDS CAA 72 bp | GTGGTTATTCAGGAACCCAGGTTTCTTTCTTGTCTGTaGTTCCTCCATCTCCTAGGGTATAGTCTTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: VVIQEPRFLSCL*FLHLLGYSLHL Trigger: CAGATGAAGACTATACCCTAGGAGATGGAGGAACAACAGACAAGAAAGAAACCTGGGTTCCTGAATAACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412855.2 ENST00000655338.1 ENST00000656201.1 |
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