Pregenerated sensors for LINC01699 (Homo sapiens)

Ensembl gene IDs: ENSG00000179452

Ensembl transcript IDs: ENST00000319701.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GGTAAGAAGCTTCCAAGACTTCCAAGCAAGGAAAGCACACTGTCGTaGCAGCACACCTCTGGGACGCTGAGGTCTGCTTCACTCCACTGT	+
Preference number: 5 (lower is better) Translates to: GKKLPRLPSKESTLS*QHTSGTLRSASLHC Trigger: ACAGTGGAGTGAAGCAGACCTCAGCGTCCCAGAGGTGTGCTGCCACGACAGTGTGCTTTCCTTGCTTGGAAGTCTTGGAAGCTTCTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319701.2
CDS GCA 90 bp	GGAAAGCACACTGTCGTGGCAGCACACCTCTGGGACGCTGAGGTCTaGTTCACTCCACTGTCTCCTGGAAAATTATATAACAGCCCAGAG	+
Preference number: 5 (lower is better) Translates to: GKHTVVAAHLWDAEV*FTPLSPGKLYNSPE Trigger: CTCTGGGCTGTTATATAATTTTCCAGGAGACAGTGGAGTGAAGCAGACCTCAGCGTCCCAGAGGTGTGCTGCCACGACAGTGTGCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319701.2
CDS CCA 90 bp	AAGACTTCCAAGCAAGGAAAGCACACTGTCGTGGCAGCACACCTCTaGGACGCTGAGGTCTGCTTCACTCCACTGTCTCCTGGAAAATTA	+
Preference number: 5 (lower is better) Translates to: KTSKQGKHTVVAAHL*DAEVCFTPLSPGKL Trigger: TAATTTTCCAGGAGACAGTGGAGTGAAGCAGACCTCAGCGTCCCAGAGGTGTGCTGCCACGACAGTGTGCTTTCCTTGCTTGGAAGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319701.2
CDS CCA 72 bp	AAGCAAGGAAAGCACACTGTCGTGGCAGCACACCTCTaGGACGCTGAGGTCTGCTTCACTCCACTGTCTCCT	+
Preference number: 6 (lower is better) Translates to: KQGKHTVVAAHL*DAEVCFTPLSP Trigger: AGGAGACAGTGGAGTGAAGCAGACCTCAGCGTCCCAGAGGTGTGCTGCCACGACAGTGTGCTTTCCTTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319701.2
CDS CCA 72 bp	CTTCCAAGACTTCCAAGCAAGGAAAGCACACTGTCGTaGCAGCACACCTCTGGGACGCTGAGGTCTGCTTCA	+
Preference number: 6 (lower is better) Translates to: LPRLPSKESTLS*QHTSGTLRSAS Trigger: TGAAGCAGACCTCAGCGTCCCAGAGGTGTGCTGCCACGACAGTGTGCTTTCCTTGCTTGGAAGTCTTGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319701.2
CDS TCA 72 bp	AAAGCACACTGTCGTGGCAGCACACCTCTGGGACGCTaGGGTCTGCTTCACTCCACTGTCTCCTGGAAAATT	+
Preference number: 6 (lower is better) Translates to: KAHCRGSTPLGR*GLLHSTVSWKI Trigger: AATTTTCCAGGAGACAGTGGAGTGAAGCAGACCTCAGCGTCCCAGAGGTGTGCTGCCACGACAGTGTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319701.2
CDS GCA 72 bp	ACTGTCGTGGCAGCACACCTCTGGGACGCTGAGGTCTaGTTCACTCCACTGTCTCCTGGAAAATTATATAAC	+
Preference number: 6 (lower is better) Translates to: TVVAAHLWDAEV*FTPLSPGKLYN Trigger: GTTATATAATTTTCCAGGAGACAGTGGAGTGAAGCAGACCTCAGCGTCCCAGAGGTGTGCTGCCACGACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319701.2
CDS CCA 72 bp	TCTTCTGAAGTCACTAAAGCAGATCTGGGTTTTGCCTaGAAAATCTTCTTAGAGGAGGTAAGAAGCTTCCAA	+
Preference number: 6 (lower is better) Translates to: SSEVTKADLGFA*KIFLEEVRSFQ Trigger: TTGGAAGCTTCTTACCTCCTCTAAGAAGATTTTCCAGGCAAAACCCAGATCTGCTTTAGTGACTTCAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319701.2

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