Pregenerated sensors for LINC01695 (Homo sapiens)
Ensembl gene IDs: ENSG00000236532Ensembl transcript IDs: ENST00000433303.1, ENST00000437194.1, ENST00000453420.5, ENST00000662491.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGCTCCCCCTTCCGCCATCAGATCCTCTTGGCCCTGCCTGATCCCTaGGGCCTCCATGGCTTGTTCTGTTTTCCATCATTCCACATGGCT | + |
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Preference number: 5 (lower is better) Translates to: CSPFRHQILLALPDP*GLHGLFCFPSFHMA Trigger: AGCCATGTGGAATGATGGAAAACAGAACAAGCCATGGAGGCCCCAGGGATCAGGCAGGGCCAAGAGGATCTGATGGCGGAAGGGGGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437194.1 ENST00000662491.1 |
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| CDS GCA 90 bp | GCTTCAGAGCATCCATGCAAGTTGCCTTGTAAGGTCTTGTTGATGTaGTCCCCCTTCCGCCATCAGATCCTCTTGGCCCTGCCTGATCCC | + |
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Preference number: 5 (lower is better) Translates to: ASEHPCKLPCKVLLM*SPFRHQILLALPDP Trigger: GGGATCAGGCAGGGCCAAGAGGATCTGATGGCGGAAGGGGGAGCACATCAACAAGACCTTACAAGGCAACTTGCATGGATGCTCTGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437194.1 ENST00000662491.1 |
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| CDS TCA 90 bp | AAGTTGCTTCAGAGCATCCATGCAAGTTGCCTTGTAAGGTCTTGTTaGTGTGCTCCCCCTTCCGCCATCAGATCCTCTTGGCCCTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: KLLQSIHASCLVRSC*CAPPSAIRSSWPCL Trigger: CAGGCAGGGCCAAGAGGATCTGATGGCGGAAGGGGGAGCACATCAACAAGACCTTACAAGGCAACTTGCATGGATGCTCTGAAGCAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437194.1 ENST00000662491.1 |
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| CDS CCA 90 bp | CGGCTGAAGACTGATGTTGCCGGATCGCCTCGGAAGCCTTGGTTGTaGCAGAAGACTCTGGAATCCCAGGAACAGAGTATAATTTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: RLKTDVAGSPRKPWL*QKTLESQEQSIILR Trigger: CCTCAAAATTATACTCTGTTCCTGGGATTCCAGAGTCTTCTGCCACAACCAAGGCTTCCGAGGCGATCCGGCAACATCAGTCTTCAGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433303.1 |
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| CDS CCA 90 bp | AAAATCTCCAGGACATCTCAGCTGCATGAGCTAATTTGTCTCCCATaGACTTGTCTCTCAATGGCTTGGCTGTGGGCCATTCCACATGGC | + |
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Preference number: 5 (lower is better) Translates to: KISRTSQLHELICLP*TCLSMAWLWAIPHG Trigger: GCCATGTGGAATGGCCCACAGCCAAGCCATTGAGAGACAAGTCCATGGGAGACAAATTAGCTCATGCAGCTGAGATGTCCTGGAGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS CCA 90 bp | CATTCAGTAGAAAGCAGTAGAAAACCCTCTTGGGATGTTGGACAGTaGCAGGGAGCTAAGGCTTCCAGTCAGCCACAAGATCACCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: HSVESSRKPSWDVGQ*QGAKASSQPQDHQS Trigger: ACTCTGGTGATCTTGTGGCTGACTGGAAGCCTTAGCTCCCTGCCACTGTCCAACATCCCAAGAGGGTTTTCTACTGCTTTCTACTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS CCA 90 bp | AAAATCTCCAGGACATCTCAGCTGCATGAGCTAATTTGTCTCCCATaGACTTGTCTCTCAATGGCTTGGCTGTGGGCCTCTACAGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: KISRTSQLHELICLP*TCLSMAWLWASTAG Trigger: ACCTGCTGTAGAGGCCCACAGCCAAGCCATTGAGAGACAAGTCCATGGGAGACAAATTAGCTCATGCAGCTGAGATGTCCTGGAGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662491.1 |
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| CDS TCA 90 bp | GTCCAAGAGAACTATAGAGGCACTAGATGTTGCACTGTTAAGAGCTaGGCCAAAGCTGCACCTCCCTTCCTCCAGCTACGGAAGGAAAAT | + |
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Preference number: 5 (lower is better) Translates to: VQENYRGTRCCTVKS*AKAAPPFLQLRKEN Trigger: ATTTTCCTTCCGTAGCTGGAGGAAGGGAGGTGCAGCTTTGGCTCAGCTCTTAACAGTGCAACATCTAGTGCCTCTATAGTTCTCTTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS GCA 90 bp | AACTTTCCTCATCAAGGAGACCTCAAAGTTGCTTCAGAGCATCCATaGAAGTTGCCTTGTAAGGTCTTGTTGATGTGCTCCCCCTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: NFPHQGDLKVASEHP*KLPCKVLLMCSPFR Trigger: GCGGAAGGGGGAGCACATCAACAAGACCTTACAAGGCAACTTGCATGGATGCTCTGAAGCAACTTTGAGGTCTCCTTGATGAGGAAAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437194.1 ENST00000662491.1 |
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| CDS CCA 90 bp | TCTTCAAAGATGGCCTCTTGTCTAGGCACTGGCCAAGTGGTGCTGTaGAAAATCTCCAGGACATCTCAGCTGCATGAGCTAATTTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: SSKMASCLGTGQVVL*KISRTSQLHELICL Trigger: GAGACAAATTAGCTCATGCAGCTGAGATGTCCTGGAGATTTTCCACAGCACCACTTGGCCAGTGCCTAGACAAGAGGCCATCTTTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS CCA 90 bp | AGATTTCATTTGTTCACAGTTGGGAAGCTGTATGGGAAGCATGTTTaGGGAGACCTCAGGAAACTTTCAACCATGACGGAAGGTGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: RFHLFTVGKLYGKHV*GDLRKLSTMTEGEG Trigger: CCCTTCACCTTCCGTCATGGTTGAAAGTTTCCTGAGGTCTCCCCAAACATGCTTCCCATACAGCTTCCCAACTGTGAACAAATGAAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS TCA 90 bp | CCAGTCGTTGAGATAGATAAGGTGGGAAAACCTGAAGGTCTCAACTaGGATTGTCACTTAGGCACAGGAATGATGCATGAGACTTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: PVVEIDKVGKPEGLN*DCHLGTGMMHETFC Trigger: GCAGAAAGTCTCATGCATCATTCCTGTGCCTAAGTGACAATCTCAGTTGAGACCTTCAGGTTTTCCCACCTTATCTATCTCAACGACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662491.1 |
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| CDS CAA 90 bp | TGTAAGGTCTTGTTGATGTGCTCCCCCTTCCGCCATCAGATCCTCTaGGCCCTGCCTGATCCCTGGGGCCTCCATGGCTTGTTCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: CKVLLMCSPFRHQIL*ALPDPWGLHGLFCF Trigger: AAAACAGAACAAGCCATGGAGGCCCCAGGGATCAGGCAGGGCCAAGAGGATCTGATGGCGGAAGGGGGAGCACATCAACAAGACCTTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000437194.1 ENST00000662491.1 |
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| CDS CCA 72 bp | CTGAAGACTGATGTTGCCGGATCGCCTCGGAAGCCTTaGTTGTGGCAGAAGACTCTGGAATCCCAGGAACAG | + |
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Preference number: 6 (lower is better) Translates to: LKTDVAGSPRKP*LWQKTLESQEQ Trigger: CTGTTCCTGGGATTCCAGAGTCTTCTGCCACAACCAAGGCTTCCGAGGCGATCCGGCAACATCAGTCTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433303.1 |
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| CDS TCA 72 bp | GGGAGACCTCAGGAAACTTTCAACCATGACGGAAGGTaGAGGGCAAGCAGTCACGTCTTACATGGCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: GRPQETFNHDGR*RASSHVLHGQS Trigger: GCTCTGGCCATGTAAGACGTGACTGCTTGCCCTTCACCTTCCGTCATGGTTGAAAGTTTCCTGAGGTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS CAA 72 bp | AAGACTGATGTTGCCGGATCGCCTCGGAAGCCTTGGTaGTGGCAGAAGACTCTGGAATCCCAGGAACAGAGT | + |
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Preference number: 6 (lower is better) Translates to: KTDVAGSPRKPW*WQKTLESQEQS Trigger: ACTCTGTTCCTGGGATTCCAGAGTCTTCTGCCACAACCAAGGCTTCCGAGGCGATCCGGCAACATCAGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433303.1 |
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| CDS TCA 72 bp | CAGAGCATCCATGCAAGTTGCCTTGTAAGGTCTTGTTaGTGTGCTCCCCCTTCCGCCATCAGATCCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: QSIHASCLVRSC*CAPPSAIRSSW Trigger: CCAAGAGGATCTGATGGCGGAAGGGGGAGCACATCAACAAGACCTTACAAGGCAACTTGCATGGATGCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437194.1 ENST00000662491.1 |
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| CDS CCA 72 bp | ACTGATGTTGCCGGATCGCCTCGGAAGCCTTGGTTGTaGCAGAAGACTCTGGAATCCCAGGAACAGAGTATA | + |
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Preference number: 6 (lower is better) Translates to: TDVAGSPRKPWL*QKTLESQEQSI Trigger: TATACTCTGTTCCTGGGATTCCAGAGTCTTCTGCCACAACCAAGGCTTCCGAGGCGATCCGGCAACATCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433303.1 |
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| CDS CCA 72 bp | ATGGCCTCTTGTCTAGGCACTGGCCAAGTGGTGCTGTaGAAAATCTCCAGGACATCTCAGCTGCATGAGCTA | + |
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Preference number: 6 (lower is better) Translates to: MASCLGTGQVVL*KISRTSQLHEL Trigger: TAGCTCATGCAGCTGAGATGTCCTGGAGATTTTCCACAGCACCACTTGGCCAGTGCCTAGACAAGAGGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS CAA 72 bp | GCTTCAGAGCATCCATGCAAGTTGCCTTGTAAGGTCTaGTTGATGTGCTCCCCCTTCCGCCATCAGATCCTC | + |
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Preference number: 6 (lower is better) Translates to: ASEHPCKLPCKV*LMCSPFRHQIL Trigger: GAGGATCTGATGGCGGAAGGGGGAGCACATCAACAAGACCTTACAAGGCAACTTGCATGGATGCTCTGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437194.1 ENST00000662491.1 |
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| CDS CAA 90 bp | AAAGTTGCTTCAGAGCATCCATGCAAGTTGCCTTGTAAGGTCTTGTaGATGTGCTCCCCCTTCCGCCATCAGATCCTCTTGGCCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: KVASEHPCKLPCKVL*MCSPFRHQILLALP Trigger: AGGCAGGGCCAAGAGGATCTGATGGCGGAAGGGGGAGCACATCAACAAGACCTTACAAGGCAACTTGCATGGATGCTCTGAAGCAACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437194.1 ENST00000662491.1 |
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| CDS CAA 90 bp | CTCAAAGTTGCTTCAGAGCATCCATGCAAGTTGCCTTGTAAGGTCTaGTTGATGTGCTCCCCCTTCCGCCATCAGATCCTCTTGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LKVASEHPCKLPCKV*LMCSPFRHQILLAL Trigger: CAGGGCCAAGAGGATCTGATGGCGGAAGGGGGAGCACATCAACAAGACCTTACAAGGCAACTTGCATGGATGCTCTGAAGCAACTTTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437194.1 ENST00000662491.1 |
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| CDS CAA 90 bp | CCTCATCAAGGAGACCTCAAAGTTGCTTCAGAGCATCCATGCAAGTaGCCTTGTAAGGTCTTGTTGATGTGCTCCCCCTTCCGCCATCAG | + |
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Preference number: 6 (lower is better) Translates to: PHQGDLKVASEHPCK*PCKVLLMCSPFRHQ Trigger: CTGATGGCGGAAGGGGGAGCACATCAACAAGACCTTACAAGGCAACTTGCATGGATGCTCTGAAGCAACTTTGAGGTCTCCTTGATGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437194.1 ENST00000662491.1 |
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| CDS CCA 72 bp | AGGACATCTCAGCTGCATGAGCTAATTTGTCTCCCATaGACTTGTCTCTCAATGGCTTGGCTGTGGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: RTSQLHELICLP*TCLSMAWLWAS Trigger: AGAGGCCCACAGCCAAGCCATTGAGAGACAAGTCCATGGGAGACAAATTAGCTCATGCAGCTGAGATGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662491.1 |
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| CDS CAA 72 bp | TCAGAGCATCCATGCAAGTTGCCTTGTAAGGTCTTGTaGATGTGCTCCCCCTTCCGCCATCAGATCCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SEHPCKLPCKVL*MCSPFRHQILL Trigger: CAAGAGGATCTGATGGCGGAAGGGGGAGCACATCAACAAGACCTTACAAGGCAACTTGCATGGATGCTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437194.1 ENST00000662491.1 |
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| CDS GCA 72 bp | CCGGCTAATTTTCATACTTCTGGAGTCACGGGATTTTaGCAGGCTGCTCTTGAACTCCTGAGCTCGAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: PANFHTSGVTGF*QAALELLSSSD Trigger: ATCACTCGAGCTCAGGAGTTCAAGAGCAGCCTGGCAAAATCCCGTGACTCCAGAAGTATGAAAATTAGCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS CCA 72 bp | AGGACATCTCAGCTGCATGAGCTAATTTGTCTCCCATaGACTTGTCTCTCAATGGCTTGGCTGTGGGCCATT | + |
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Preference number: 6 (lower is better) Translates to: RTSQLHELICLP*TCLSMAWLWAI Trigger: AATGGCCCACAGCCAAGCCATTGAGAGACAAGTCCATGGGAGACAAATTAGCTCATGCAGCTGAGATGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS CAA 72 bp | GGAGACCTCAAAGTTGCTTCAGAGCATCCATGCAAGTaGCCTTGTAAGGTCTTGTTGATGTGCTCCCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GDLKVASEHPCK*PCKVLLMCSPF Trigger: GAAGGGGGAGCACATCAACAAGACCTTACAAGGCAACTTGCATGGATGCTCTGAAGCAACTTTGAGGTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437194.1 ENST00000662491.1 |
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| CDS CCA 72 bp | GTTTACTTCTTCAAAGATGGCCTCTTGTCTAGGCACTaGCCAAGTGGTGCTGTGGAAAATCTCCAGGACATC | + |
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Preference number: 6 (lower is better) Translates to: VYFFKDGLLSRH*PSGAVENLQDI Trigger: GATGTCCTGGAGATTTTCCACAGCACCACTTGGCCAGTGCCTAGACAAGAGGCCATCTTTGAAGAAGTAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS CCA 72 bp | ACATTTTCTTGTCTAGGCACTGGCCAAGTGGTGCTGTaGAAAATCTCCAGGACATCTCAGCTGCATGAGCTA | + |
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Preference number: 6 (lower is better) Translates to: TFSCLGTGQVVL*KISRTSQLHEL Trigger: TAGCTCATGCAGCTGAGATGTCCTGGAGATTTTCCACAGCACCACTTGGCCAGTGCCTAGACAAGAAAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662491.1 |
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| CDS GCA 72 bp | CATCAAGGAGACCTCAAAGTTGCTTCAGAGCATCCATaGAAGTTGCCTTGTAAGGTCTTGTTGATGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: HQGDLKVASEHP*KLPCKVLLMCS Trigger: GGAGCACATCAACAAGACCTTACAAGGCAACTTGCATGGATGCTCTGAAGCAACTTTGAGGTCTCCTTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437194.1 ENST00000662491.1 |
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| CDS CCA 72 bp | TTGTTCACAGTTGGGAAGCTGTATGGGAAGCATGTTTaGGGAGACCTCAGGAAACTTTCAACCATGACGGAA | + |
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Preference number: 6 (lower is better) Translates to: LFTVGKLYGKHV*GDLRKLSTMTE Trigger: TTCCGTCATGGTTGAAAGTTTCCTGAGGTCTCCCCAAACATGCTTCCCATACAGCTTCCCAACTGTGAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS CAA 72 bp | GTTGAGCCAACTTTCCTCATCAAGGAGACCTCAAAGTaGCTTCAGAGCATCCATGCAAGTTGCCTTGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: VEPTFLIKETSK*LQSIHASCLVR Trigger: CCTTACAAGGCAACTTGCATGGATGCTCTGAAGCAACTTTGAGGTCTCCTTGATGAGGAAAGTTGGCTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437194.1 ENST00000662491.1 |
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| CDS CAA 72 bp | TTTGTTCACAGTTGGGAAGCTGTATGGGAAGCATGTTaGGGGAGACCTCAGGAAACTTTCAACCATGACGGA | + |
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Preference number: 6 (lower is better) Translates to: FVHSWEAVWEAC*GRPQETFNHDG Trigger: TCCGTCATGGTTGAAAGTTTCCTGAGGTCTCCCCAAACATGCTTCCCATACAGCTTCCCAACTGTGAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS CAA 72 bp | GATGTTGCCGGATCGCCTCGGAAGCCTTTTGTTTCGTaGTTCTGTCATCCCTTTAGTGTATGGTACTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: DVAGSPRKPFVS*FCHPFSVWYLF Trigger: AAACAAGTACCATACACTAAAGGGATGACAGAACAACGAAACAAAAGGCTTCCGAGGCGATCCGGCAACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS CAA 90 bp | CTGAAGACTGATGTTGCCGGATCGCCTCGGAAGCCTTTTGTTTCGTaGTTCTGTCATCCCTTTAGTGTATGGTACTTGTTTACTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LKTDVAGSPRKPFVS*FCHPFSVWYLFTSS Trigger: TGAAGAAGTAAACAAGTACCATACACTAAAGGGATGACAGAACAACGAAACAAAAGGCTTCCGAGGCGATCCGGCAACATCAGTCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS TCA 72 bp | GAGATAGATAAGGTGGGAAAACCTGAAGGTCTCAACTaGGATTGTCACTTAGGCACAGGAATGATGCATGAG | + |
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Preference number: 6 (lower is better) Translates to: EIDKVGKPEGLN*DCHLGTGMMHE Trigger: CTCATGCATCATTCCTGTGCCTAAGTGACAATCTCAGTTGAGACCTTCAGGTTTTCCCACCTTATCTATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662491.1 |
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| CDS CCA 72 bp | AAAGAGATTTCATTTGTTCACAGTTGGGAAGCTGTATaGGAAGCATGTTTGGGGAGACCTCAGGAAACTTTC | + |
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Preference number: 6 (lower is better) Translates to: KEISFVHSWEAV*EACLGRPQETF Trigger: GAAAGTTTCCTGAGGTCTCCCCAAACATGCTTCCCATACAGCTTCCCAACTGTGAACAAATGAAATCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS CAA 72 bp | CAGAAGACTCTGGAATCCCAGGAACAGAGTATAATTTaGAGGGTATCAGAGCAAGAAAGGAAAGCAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: QKTLESQEQSII*RVSEQERKAES Trigger: GCTTTCTGCTTTCCTTTCTTGCTCTGATACCCTCAAAATTATACTCTGTTCCTGGGATTCCAGAGTCTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433303.1 |
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| CDS CAA 90 bp | AAGCCTTTTGTTTCGTTGTTCTGTCATCCCTTTAGTGTATGGTACTaGTTTACTTCTTCAAAGATGGCCTCTTGTCTAGGCACTGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: KPFVSLFCHPFSVWY*FTSSKMASCLGTGQ Trigger: TTGGCCAGTGCCTAGACAAGAGGCCATCTTTGAAGAAGTAAACAAGTACCATACACTAAAGGGATGACAGAACAACGAAACAAAAGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453420.5 |
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| CDS TCA 72 bp | TATTTCTCATTCAACAGGATAGATAACATTTGGACTTaGAGGGAGAGTAGCTGTTCTCTTGCAGCAGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: YFSFNRIDNIWT*RESSCSLAAGS Trigger: GCTACCTGCTGCAAGAGAACAGCTACTCTCCCTTCAAGTCCAAATGTTATCTATCCTGTTGAATGAGAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662491.1 |
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| CDS CAA 72 bp | AGGATCCTCTACACCACTCTCAGTTTTTCTATCATATaGTGGGTTATAAGCAATTACTTAAGAACTTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: RILYTTLSFSII*WVISNYLRTFG Trigger: TCCAAAAGTTCTTAAGTAATTGCTTATAACCCACAATATGATAGAAAAACTGAGAGTGGTGTAGAGGATCCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662491.1 |
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