Pregenerated sensors for LINC01692 (Homo sapiens)
Ensembl gene IDs: ENSG00000226983Ensembl transcript IDs: ENST00000441009.1, ENST00000659370.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACTGACACTATCTATGGCAGTTTTGAGAATCCCTTCTCTCAACAGTaGCAGTCACACTGCTTTCTGGGTTGGGGCCAGTGGATGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TDTIYGSFENPFSQQ*QSHCFLGWGQWMFS Trigger: GGAGAACATCCACTGGCCCCAACCCAGAAAGCAGTGTGACTGGCACTGTTGAGAGAAGGGATTCTCAAAACTGCCATAGATAGTGTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659370.1 |
||
| CDS GCA 90 bp | ATAATCAAGTGTATGCTGAGAACCATTCCTCCACATCAGCTAAGTTaGTTCACAGAGGAAATTACAAGCCTCACTCTATCCATGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IIKCMLRTIPPHQLS*FTEEITSLTLSMLE Trigger: CTCCAGCATGGATAGAGTGAGGCTTGTAATTTCCTCTGTGAAGCAACTTAGCTGATGTGGAGGAATGGTTCTCAGCATACACTTGATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441009.1 |
||
| CDS CCA 90 bp | ACAGAGGAAATTACAAGCCTCACTCTATCCATGCTGGAGAAACACTaGGTTCTTATTGTAGACCATAGATGTGTGGCAGAAAGGAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: TEEITSLTLSMLEKH*VLIVDHRCVAERNV Trigger: GACATTCCTTTCTGCCACACATCTATGGTCTACAATAAGAACCCAGTGTTTCTCCAGCATGGATAGAGTGAGGCTTGTAATTTCCTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441009.1 |
||
| CDS TCA 90 bp | CTTAGGAGGACCATTGGCTCAGGAAATTTAAAAGTAACCCTCAAATaGTCCAGCACTCTTACTAAACAAATGCTGGCAGGATTTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LRRTIGSGNLKVTLK*SSTLTKQMLAGFED Trigger: ATCCTCAAATCCTGCCAGCATTTGTTTAGTAAGAGTGCTGGATCATTTGAGGGTTACTTTTAAATTTCCTGAGCCAATGGTCCTCCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441009.1 |
||
| CDS TCA 90 bp | GCCAAAGATCCATTATTACAGTTAAGACCTACTGTACAGGCAGTCTaGGATCTTTTACTGTCTCATCCCAACAACTCTAAGAAGTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: AKDPLLQLRPTVQAV*DLLLSHPNNSKKCR Trigger: CCTACACTTCTTAGAGTTGTTGGGATGAGACAGTAAAAGATCTCAGACTGCCTGTACAGTAGGTCTTAACTGTAATAATGGATCTTTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659370.1 |
||
| CDS CCA 90 bp | ATGTGTGCATGTCATTTTAATTTTTCTTTGGAGACAGAGGCATCTTaGTCCCAGTTCTATTCATCTTTCTTAAAGCATCTGAGGCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: MCACHFNFSLETEAS*SQFYSSFLKHLRLG Trigger: CCCTAGCCTCAGATGCTTTAAGAAAGATGAATAGAACTGGGACCAAGATGCCTCTGTCTCCAAAGAAAAATTAAAATGACATGCACACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659370.1 |
||
| CDS CCA 90 bp | ATGTTTTGGATATGCATATCTTTGATGTACCGCTCTATAGGCAATTaGGATTTGGTTTGTCCCTTGTTAATTTCATCAGCCATTACACAG | + |
|
Preference number: 5 (lower is better) Translates to: MFWICISLMYRSIGN*DLVCPLLISSAITQ Trigger: CTGTGTAATGGCTGATGAAATTAACAAGGGACAAACCAAATCCCAATTGCCTATAGAGCGGTACATCAAAGATATGCATATCCAAAACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441009.1 |
||
| CDS GCA 90 bp | GCGATGCAGTCTCCTACAACACACTTGTGTTTAAATCATGGCTCATaGCACTTTGTATCTTTGTGTCCTGAAACAAATTATTTAAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: AMQSPTTHLCLNHGS*HFVSLCPETNYLKF Trigger: GAATTTTAAATAATTTGTTTCAGGACACAAAGATACAAAGTGGCATGAGCCATGATTTAAACACAAGTGTGTTGTAGGAGACTGCATCGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441009.1 |
||
| CDS CCA 72 bp | GCAGCCCTTGCTCGCTCTGGGCTCTCGGCGCCTCCTTaGCCTCTGCGTCCGCTCTGGCCGCGTTCCAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: AALARSGLSAPP*PLRPLWPRSRS Trigger: GCTCCTGGAACGCGGCCAGAGCGGACGCAGAGGCCAAGGAGGCGCCGAGAGCCCAGAGCGAGCAAGGGCTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441009.1 |
||
| CDS GCA 72 bp | TTTGAGAATCCCTTCTCTCAACAGTGCCAGTCACACTaGTTTCTGGGTTGGGGCCAGTGGATGTTCTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FENPFSQQCQSH*FLGWGQWMFSL Trigger: GAGGGAGAACATCCACTGGCCCCAACCCAGAAAGCAGTGTGACTGGCACTGTTGAGAGAAGGGATTCTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659370.1 |
||
| CDS CAA 72 bp | CTTCTCTCAACAGTGCCAGTCACACTGCTTTCTGGGTaGGGGCCAGTGGATGTTCTCCCTCTGAATGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLSTVPVTLLSG*GPVDVLPLNDS Trigger: TGAATCATTCAGAGGGAGAACATCCACTGGCCCCAACCCAGAAAGCAGTGTGACTGGCACTGTTGAGAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659370.1 |
||
| CDS GCA 72 bp | GAGTTGGTGTGCATCTCTGTAAACTGCATATTAGCCTaGAGCTGGGCAGAATCATCTGACAACACGGTACGC | + |
|
Preference number: 6 (lower is better) Translates to: ELVCISVNCILA*SWAESSDNTVR Trigger: GCGTACCGTGTTGTCAGATGATTCTGCCCAGCTGCAGGCTAATATGCAGTTTACAGAGATGCACACCAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659370.1 |
||
| CDS TCA 72 bp | AAACTGCATATTAGCCTGCAGCTGGGCAGAATCATCTaGCAACACGGTACGCTGAAGAACGTCGGTTGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: KLHISLQLGRII*QHGTLKNVGCL Trigger: TAAACAACCGACGTTCTTCAGCGTACCGTGTTGTCAGATGATTCTGCCCAGCTGCAGGCTAATATGCAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659370.1 |
||
| CDS CAA 90 bp | CAGGTCACTTTAGCGCCTTGTGCGATGCAGTCTCCTACAACACACTaGTGTTTAAATCATGGCTCATGCCACTTTGTATCTTTGTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QVTLAPCAMQSPTTH*CLNHGSCHFVSLCP Trigger: AGGACACAAAGATACAAAGTGGCATGAGCCATGATTTAAACACAAGTGTGTTGTAGGAGACTGCATCGCACAAGGCGCTAAAGTGACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441009.1 |
||
| CDS CAA 72 bp | GGGCCAGTGGATGTTCTCCCTCTGAATGATTCAAGTTaGACTCACACAACCATGACTCCTTTAAGGAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: GPVDVLPLNDSS*THTTMTPLRST Trigger: TGTACTCCTTAAAGGAGTCATGGTTGTGTGAGTCAAACTTGAATCATTCAGAGGGAGAACATCCACTGGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659370.1 |
||
| CDS CCA 72 bp | ATTACAAGCCTCACTCTATCCATGCTGGAGAAACACTaGGTTCTTATTGTAGACCATAGATGTGTGGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ITSLTLSMLEKH*VLIVDHRCVAE Trigger: TTCTGCCACACATCTATGGTCTACAATAAGAACCCAGTGTTTCTCCAGCATGGATAGAGTGAGGCTTGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441009.1 |
||
| CDS CAA 90 bp | AATAATCAAGTGTATGCTGAGAACCATTCCTCCACATCAGCTAAGTaGCTTCACAGAGGAAATTACAAGCCTCACTCTATCCATGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: NNQVYAENHSSTSAK*LHRGNYKPHSIHAG Trigger: TCCAGCATGGATAGAGTGAGGCTTGTAATTTCCTCTGTGAAGCAACTTAGCTGATGTGGAGGAATGGTTCTCAGCATACACTTGATTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441009.1 |
||
| CDS CAA 90 bp | TTTCTGCACAGAGTAGTTGTAAATTACTTCTTTTTCTGTCCAGAGTaGGTGTGCATCTCTGTAAACTGCATATTAGCCTGCAGCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FLHRVVVNYFFFCPE*VCISVNCILACSWA Trigger: TGCCCAGCTGCAGGCTAATATGCAGTTTACAGAGATGCACACCAACTCTGGACAGAAAAAGAAGTAATTTACAACTACTCTGTGCAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659370.1 |
||
| CDS TCA 72 bp | ACCATTGGCTCAGGAAATTTAAAAGTAACCCTCAAATaGTCCAGCACTCTTACTAAACAAATGCTGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TIGSGNLKVTLK*SSTLTKQMLAG Trigger: TCCTGCCAGCATTTGTTTAGTAAGAGTGCTGGATCATTTGAGGGTTACTTTTAAATTTCCTGAGCCAATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441009.1 |
||
| CDS TCA 72 bp | CCATTATTACAGTTAAGACCTACTGTACAGGCAGTCTaGGATCTTTTACTGTCTCATCCCAACAACTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLLQLRPTVQAV*DLLLSHPNNSK Trigger: CTTAGAGTTGTTGGGATGAGACAGTAAAAGATCTCAGACTGCCTGTACAGTAGGTCTTAACTGTAATAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659370.1 |
||
| CDS CCA 72 bp | ATATGCATATCTTTGATGTACCGCTCTATAGGCAATTaGGATTTGGTTTGTCCCTTGTTAATTTCATCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ICISLMYRSIGN*DLVCPLLISSA Trigger: GGCTGATGAAATTAACAAGGGACAAACCAAATCCCAATTGCCTATAGAGCGGTACATCAAAGATATGCATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441009.1 |
||
| CDS CAA 72 bp | TTTGATGTACCGCTCTATAGGCAATTGGGATTTGGTTaGTCCCTTGTTAATTTCATCAGCCATTACACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FDVPLYRQLGFG*SLVNFISHYTE Trigger: TTCTGTGTAATGGCTGATGAAATTAACAAGGGACAAACCAAATCCCAATTGCCTATAGAGCGGTACATCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441009.1 |
||
| CDS GCA 72 bp | TCTCCTACAACACACTTGTGTTTAAATCATGGCTCATaGCACTTTGTATCTTTGTGTCCTGAAACAAATTAT | + |
|
Preference number: 6 (lower is better) Translates to: SPTTHLCLNHGS*HFVSLCPETNY Trigger: ATAATTTGTTTCAGGACACAAAGATACAAAGTGGCATGAGCCATGATTTAAACACAAGTGTGTTGTAGGAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441009.1 |
||