Pregenerated sensors for LINC01687 (Homo sapiens)
Ensembl gene IDs: ENSG00000233215Ensembl transcript IDs: ENST00000416327.5, ENST00000419467.1, ENST00000420255.1, ENST00000656955.1, ENST00000666229.1, ENST00000667392.1, ENST00000667604.1, ENST00000669715.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCCTTCTGTGTCTTCCCTCGGCCACTCCTGGTGCCTTCCATCGGATaGTTTGTTAGGAGTGCGCCAGTTGTCTCAGTCCCTTGCTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: SFCVFPRPLLVPSIG*FVRSAPVVSVPCWR Trigger: CCGCCAGCAAGGGACTGAGACAACTGGCGCACTCCTAACAAATCATCCGATGGAAGGCACCAGGAGTGGCCGAGGGAAGACACAGAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000656955.1 ENST00000666229.1 ENST00000667392.1 ENST00000667604.1 ENST00000669715.1 |
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| CDS GCA 90 bp | GAGTCCTTGGGGGCCAGGAACAAGTCCCAGCGCATGGTAGCCCAGTaGAATGTTCCTCCTGTTTCAGCCCAGCTTCCTTCTGTGTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: ESLGARNKSQRMVAQ*NVPPVSAQLPSVSS Trigger: GGAAGACACAGAAGGAAGCTGGGCTGAAACAGGAGGAACATTGCACTGGGCTACCATGCGCTGGGACTTGTTCCTGGCCCCCAAGGACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000656955.1 ENST00000666229.1 ENST00000667392.1 ENST00000667604.1 ENST00000669715.1 |
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| CDS TCA 90 bp | TGGTTAGAACAGGTTGCTCCTTGCAAGTTCAACTCACCCATTCCCTaGGAGTCCTTGGGGGCCAGGAACAAGTCCCAGCGCATGGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: WLEQVAPCKFNSPIP*ESLGARNKSQRMVA Trigger: GGCTACCATGCGCTGGGACTTGTTCCTGGCCCCCAAGGACTCTCAGGGAATGGGTGAGTTGAACTTGCAAGGAGCAACCTGTTCTAACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000419467.1 |
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| CDS GCA 90 bp | GTTTCAGCCCAGCTTCCTTCTGTGTCTTCCCTCGGCCACTCCTGGTaGCTTCCATCGGATGATTTGTTAGGAGTGCGCCAGTTGTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: VSAQLPSVSSLGHSW*LPSDDLLGVRQLSQ Trigger: CTGAGACAACTGGCGCACTCCTAACAAATCATCCGATGGAAGGCACCAGGAGTGGCCGAGGGAAGACACAGAAGGAAGCTGGGCTGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000656955.1 ENST00000666229.1 ENST00000667392.1 ENST00000667604.1 ENST00000669715.1 |
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| CDS CCA 90 bp | CCTGTTTCAGCCCAGCTTCCTTCTGTGTCTTCCCTCGGCCACTCCTaGTGCCTTCCATCGGATGATTTGTTAGGAGTGCGCCAGTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: PVSAQLPSVSSLGHS*CLPSDDLLGVRQLS Trigger: AGACAACTGGCGCACTCCTAACAAATCATCCGATGGAAGGCACCAGGAGTGGCCGAGGGAAGACACAGAAGGAAGCTGGGCTGAAACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000656955.1 ENST00000666229.1 ENST00000667392.1 ENST00000667604.1 ENST00000669715.1 |
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| CDS GCA 90 bp | TGTCTAGTCGGCCATCTTGCCCCAAGCTTAGGACACTTCTATTTCTaGATAAGTTGGAATAACCAGGCATGCTGCTTGACACTCTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: CLVGHLAPSLGHFYF*ISWNNQACCLTLCF Trigger: AAAGCAGAGTGTCAAGCAGCATGCCTGGTTATTCCAACTTATGCAGAAATAGAAGTGTCCTAAGCTTGGGGCAAGATGGCCGACTAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000666229.1 ENST00000669715.1 |
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| CDS CCA 90 bp | GGCCATCTTGCCCCAAGCTTAGGACACTTCTATTTCTGCATAAGTTaGAATAACCAGGCATGCTGCTTGACACTCTGCTTTTTAGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: GHLAPSLGHFYFCIS*NNQACCLTLCFLGR Trigger: TCTTCCTAAAAAGCAGAGTGTCAAGCAGCATGCCTGGTTATTCCAACTTATGCAGAAATAGAAGTGTCCTAAGCTTGGGGCAAGATGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000666229.1 ENST00000669715.1 |
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| CDS CCA 90 bp | GTCTGGCCTCCTGGAGAGAACTTTTACCTTTGTTCCAATTTAATTTaGACTCGTCAGAGAAGTCATTATTTCCAGACCCACCAATTGGGT | + |
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Preference number: 5 (lower is better) Translates to: VWPPGENFYLCSNLI*TRQRSHYFQTHQLG Trigger: ACCCAATTGGTGGGTCTGGAAATAATGACTTCTCTGACGAGTCCAAATTAAATTGGAACAAAGGTAAAAGTTCTCTCCAGGAGGCCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416327.5 ENST00000667392.1 |
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| CDS CCA 90 bp | TACTGGAGAGGTTGTAGAGAAATAGGAAGGCTTTTACACTGTTGGTaGGCGTATAAATTAGTTCAACCATTGTGTAAGACAGTGTCGCGA | + |
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Preference number: 5 (lower is better) Translates to: YWRGCREIGRLLHCW*AYKLVQPLCKTVSR Trigger: TCGCGACACTGTCTTACACAATGGTTGAACTAATTTATACGCCCACCAACAGTGTAAAAGCCTTCCTATTTCTCTACAACCTCTCCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656955.1 ENST00000667604.1 |
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| CDS TCA 90 bp | CTCAGCATCCAATTATTCCCATTGTATTTAAATTTTGTAGTTGTGTaGCTTAGGTTCCCACCGTTAGATCCATTCCCTGAGAGTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: LSIQLFPLYLNFVVV*LRFPPLDPFPESPW Trigger: CCAAGGACTCTCAGGGAATGGATCTAACGGTGGGAACCTAAGTCACACAACTACAAAATTTAAATACAATGGGAATAATTGGATGCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420255.1 |
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| CDS GCA 90 bp | TATTTCTGCATAAGTTGGAATAACCAGGCATGCTGCTTGACACTCTaGTTTTTAGGAAGATTACCCCAGATAATAGATATGCAGCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: YFCISWNNQACCLTL*FLGRLPQIIDMQQG Trigger: TCCCTGCTGCATATCTATTATCTGGGGTAATCTTCCTAAAAAGCAGAGTGTCAAGCAGCATGCCTGGTTATTCCAACTTATGCAGAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000666229.1 ENST00000669715.1 |
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| CDS CCA 90 bp | GTAGAGATGTGTAAGAAACTGCCTGTTCTTCATTGTCTGGCCTCCTaGAGAGAACTTTTACCTTTGTTCCAATTTAATTTGGACTCGTCA | + |
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Preference number: 5 (lower is better) Translates to: VEMCKKLPVLHCLAS*RELLPLFQFNLDSS Trigger: TGACGAGTCCAAATTAAATTGGAACAAAGGTAAAAGTTCTCTCCAGGAGGCCAGACAATGAAGAACAGGCAGTTTCTTACACATCTCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416327.5 ENST00000667392.1 |
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| CDS CCA 90 bp | AGTTACTGGAGAGGTTGTAGAGAAATAGGAAGGCTTTTACACTGTTaGTGGGCGTATAAATTAGTTCAACCATTGTGTAAGACAGTGTCG | + |
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Preference number: 5 (lower is better) Translates to: SYWRGCREIGRLLHC*WAYKLVQPLCKTVS Trigger: CGACACTGTCTTACACAATGGTTGAACTAATTTATACGCCCACCAACAGTGTAAAAGCCTTCCTATTTCTCTACAACCTCTCCAGTAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656955.1 ENST00000667604.1 |
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| CDS GCA 90 bp | TTAGGACACTTCTATTTCTGCATAAGTTGGAATAACCAGGCATGCTaGTTGACACTCTGCTTTTTAGGAAGATTACCCCAGATAATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LGHFYFCISWNNQAC*LTLCFLGRLPQIID Trigger: ATCTATTATCTGGGGTAATCTTCCTAAAAAGCAGAGTGTCAAGCAGCATGCCTGGTTATTCCAACTTATGCAGAAATAGAAGTGTCCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000666229.1 ENST00000669715.1 |
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| CDS TCA 90 bp | CTCAGCATCCAATTATTCCCATTGTATTTAAATTTTGTAGTTGTGTaGCTTAGGTTCCCACCGTTAGATACAATCACTAGGTCCCACAAT | + |
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Preference number: 5 (lower is better) Translates to: LSIQLFPLYLNFVVV*LRFPPLDTITRSHN Trigger: ATTGTGGGACCTAGTGATTGTATCTAACGGTGGGAACCTAAGTCACACAACTACAAAATTTAAATACAATGGGAATAATTGGATGCTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416327.5 |
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| CDS TCA 90 bp | GGTCATCATCACTGGTTGTTAGAGAAATGCAAATCAAAACCACAATaGGATACCATCTCATGCCAGTTAGAATGGCGATCATTAAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: GHHHWLLEKCKSKPQ*DTISCQLEWRSLKS Trigger: ACTTTTTAATGATCGCCATTCTAACTGGCATGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTAACAACCAGTGATGATGACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000656955.1 ENST00000667604.1 |
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| CDS CCA 90 bp | ATGCTGATTTTTGGTGCTAAACACATCACATACAGATTCACAGTTTaGAATGTAGCAAGCGTGTTAACATTTTCTCCTCAAGCGATATAT | + |
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Preference number: 5 (lower is better) Translates to: MLIFGAKHITYRFTV*NVASVLTFSPQAIY Trigger: ATATATCGCTTGAGGAGAAAATGTTAACACGCTTGCTACATTCCAAACTGTGAATCTGTATGTGATGTGTTTAGCACCAAAAATCAGCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666229.1 |
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| CDS TCA 72 bp | CAGGTTGCTCCTTGCAAGTTCAACTCACCCATTCCCTaGGAGTCCTTGGGGGCCAGGAACAAGTCCCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: QVAPCKFNSPIP*ESLGARNKSQR Trigger: GCGCTGGGACTTGTTCCTGGCCCCCAAGGACTCTCAGGGAATGGGTGAGTTGAACTTGCAAGGAGCAACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000419467.1 |
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| CDS GCA 72 bp | GGGGCCAGGAACAAGTCCCAGCGCATGGTAGCCCAGTaGAATGTTCCTCCTGTTTCAGCCCAGCTTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GARNKSQRMVAQ*NVPPVSAQLPS Trigger: AGAAGGAAGCTGGGCTGAAACAGGAGGAACATTGCACTGGGCTACCATGCGCTGGGACTTGTTCCTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000656955.1 ENST00000666229.1 ENST00000667392.1 ENST00000667604.1 ENST00000669715.1 |
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| CDS CCA 72 bp | GCCCAGCTTCCTTCTGTGTCTTCCCTCGGCCACTCCTaGTGCCTTCCATCGGATGATTTGTTAGGAGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: AQLPSVSSLGHS*CLPSDDLLGVR Trigger: GCGCACTCCTAACAAATCATCCGATGGAAGGCACCAGGAGTGGCCGAGGGAAGACACAGAAGGAAGCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000656955.1 ENST00000666229.1 ENST00000667392.1 ENST00000667604.1 ENST00000669715.1 |
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| CDS GCA 72 bp | CAGCTTCCTTCTGTGTCTTCCCTCGGCCACTCCTGGTaGCTTCCATCGGATGATTTGTTAGGAGTGCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: QLPSVSSLGHSW*LPSDDLLGVRQ Trigger: CTGGCGCACTCCTAACAAATCATCCGATGGAAGGCACCAGGAGTGGCCGAGGGAAGACACAGAAGGAAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000656955.1 ENST00000666229.1 ENST00000667392.1 ENST00000667604.1 ENST00000669715.1 |
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| CDS TCA 72 bp | GTTGAACCTGAAGATGTACACCTTAAACCCATTCCCTaGGAGTCCTTGGGGGCCAGGAACAAGTCCCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: VEPEDVHLKPIP*ESLGARNKSQR Trigger: GCGCTGGGACTTGTTCCTGGCCCCCAAGGACTCTCAGGGAATGGGTTTAAGGTGTACATCTTCAGGTTCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000656955.1 ENST00000666229.1 ENST00000667392.1 ENST00000667604.1 ENST00000669715.1 |
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| CDS CAA 72 bp | TGCCTTCCATCGGATGATTTGTTAGGAGTGCGCCAGTaGTCTCAGTCCCTTGCTGGCGGTAATTCCACTTGC | + |
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Preference number: 6 (lower is better) Translates to: CLPSDDLLGVRQ*SQSLAGGNSTC Trigger: GCAAGTGGAATTACCGCCAGCAAGGGACTGAGACAACTGGCGCACTCCTAACAAATCATCCGATGGAAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000656955.1 ENST00000666229.1 ENST00000667392.1 ENST00000667604.1 ENST00000669715.1 |
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| CDS GCA 72 bp | GCGGTAATTCCACTTGCTGTGTCTAGTCGGCCATCTTaGCCCAAGCTCCCCTTGATTATCAGGGTTAATTAC | + |
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Preference number: 6 (lower is better) Translates to: AVIPLAVSSRPS*PKLPLIIRVNY Trigger: GTAATTAACCCTGATAATCAAGGGGAGCTTGGGGCAAGATGGCCGACTAGACACAGCAAGTGGAATTACCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667604.1 |
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| CDS CAA 90 bp | GTCATTCTTCTTTATTCCTTTGGCCAATGTAGGATGACCTTGAGGTaGATAGTTGAGTGCTGTCACTTGGTGCCTACCACCTCAGCATCC | + |
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Preference number: 6 (lower is better) Translates to: VILLYSFGQCRMTLR*IVECCHLVPTTSAS Trigger: GGATGCTGAGGTGGTAGGCACCAAGTGACAGCACTCAACTATCAACCTCAAGGTCATCCTACATTGGCCAAAGGAATAAAGAAGAATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000416327.5 ENST00000420255.1 ENST00000667392.1 ENST00000669715.1 |
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| CDS GCA 72 bp | GGGAGGCTAGGCCAGTCTCTCCTTTTCAAGTTTTTCTaGCTGCTTTATATTCGCTGGCAGCTGATTAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: GRLGQSLLFKFF*LLYIRWQLIRL Trigger: TAACCTAATCAGCTGCCAGCGAATATAAAGCAGGCAGAAAAACTTGAAAAGGAGAGACTGGCCTAGCCTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000416327.5 |
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| CDS GCA 72 bp | AGGGCGAGAAATTCAAGCAGAGGAGTGAGAAGTCATTaGCTACTTCTGGTTTTGAAGCAGATGGGCCATTTG | + |
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Preference number: 6 (lower is better) Translates to: RARNSSRGVRSH*LLLVLKQMGHL Trigger: CAAATGGCCCATCTGCTTCAAAACCAGAAGTAGGCAATGACTTCTCACTCCTCTGCTTGAATTTCTCGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667392.1 |
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| CDS CAA 72 bp | AGGATGACCTTGAGGTTGATAGTTGAGTGCTGTCACTaGGTGCCTACCACCTCAGCATCCAATTATTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: RMTLRLIVECCH*VPTTSASNYSH Trigger: ATGGGAATAATTGGATGCTGAGGTGGTAGGCACCAAGTGACAGCACTCAACTATCAACCTCAAGGTCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000416327.5 ENST00000420255.1 ENST00000667392.1 ENST00000669715.1 |
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| CDS CAA 72 bp | CTTTATTCCTTTGGCCAATGTAGGATGACCTTGAGGTaGATAGTTGAGTGCTGTCACTTGGTGCCTACCACC | + |
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Preference number: 6 (lower is better) Translates to: LYSFGQCRMTLR*IVECCHLVPTT Trigger: GGTGGTAGGCACCAAGTGACAGCACTCAACTATCAACCTCAAGGTCATCCTACATTGGCCAAAGGAATAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000416327.5 ENST00000420255.1 ENST00000667392.1 ENST00000669715.1 |
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| CDS CAA 72 bp | GAGGGCGAGAAATTCAAGCAGAGGAGTGAGAAGTCATaGCCTACTTCTGGTTTTGAAGCAGATGGGCCATTT | + |
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Preference number: 6 (lower is better) Translates to: EGEKFKQRSEKS*PTSGFEADGPF Trigger: AAATGGCCCATCTGCTTCAAAACCAGAAGTAGGCAATGACTTCTCACTCCTCTGCTTGAATTTCTCGCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667392.1 |
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| CDS CCA 72 bp | GCCCCAAGCTTAGGACACTTCTATTTCTGCATAAGTTaGAATAACCAGGCATGCTGCTTGACACTCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: APSLGHFYFCIS*NNQACCLTLCF Trigger: AAAGCAGAGTGTCAAGCAGCATGCCTGGTTATTCCAACTTATGCAGAAATAGAAGTGTCCTAAGCTTGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000666229.1 ENST00000669715.1 |
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| CDS CAA 90 bp | TGTCTGGCCTCCTGGAGAGAACTTTTACCTTTGTTCCAATTTAATTaGGACTCGTCAGAGAAGTCATTATTTCCAGACCCACCAATTGGG | + |
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Preference number: 6 (lower is better) Translates to: CLASWRELLPLFQFN*DSSEKSLFPDPPIG Trigger: CCCAATTGGTGGGTCTGGAAATAATGACTTCTCTGACGAGTCCAAATTAAATTGGAACAAAGGTAAAAGTTCTCTCCAGGAGGCCAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416327.5 ENST00000667392.1 |
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| CDS TCA 72 bp | TCAAGTTTTTCTGCCTGCTTTATATTCGCTGGCAGCTaGTTAGGTTATGCCCATGAGATTAAGGGTGGATCT | + |
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Preference number: 6 (lower is better) Translates to: SSFSACFIFAGS*LGYAHEIKGGS Trigger: AGATCCACCCTTAATCTCATGGGCATAACCTAATCAGCTGCCAGCGAATATAAAGCAGGCAGAAAAACTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000416327.5 |
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| CDS CCA 72 bp | TGTACCTTTTCAAACATGCATTGCTCCACTGTCTCTTaGTCTCATGACATTTTAAGCCCAGCAGCCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: CTFSNMHCSTVS*SHDILSPAAFF Trigger: AAAGAAGGCTGCTGGGCTTAAAATGTCATGAGACCAAGAGACAGTGGAGCAATGCATGTTTGAAAAGGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656955.1 |
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| CDS CCA 72 bp | GAAACTATCGTCGGAGTCAACAGGCAACCTACAGAATaGGAGAAAATTTTGCAATCTCTCCATCTGACAAAG | + |
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Preference number: 6 (lower is better) Translates to: ETIVGVNRQPTE*EKILQSLHLTK Trigger: CTTTGTCAGATGGAGAGATTGCAAAATTTTCTCCCATTCTGTAGGTTGCCTGTTGACTCCGACGATAGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656955.1 ENST00000667604.1 |
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| CDS CCA 72 bp | TTTCCCTTTTCAAACATGCATTGCTCCACTGTCTCTTaGTCTCATGACATTTTAAGCCCAGCAGCCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: FPFSNMHCSTVS*SHDILSPAAFF Trigger: AAAGAAGGCTGCTGGGCTTAAAATGTCATGAGACCAAGAGACAGTGGAGCAATGCATGTTTGAAAAGGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666229.1 |
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| CDS CAA 72 bp | ATTCTTCTTTATTCCTTTGGCCAATGTAGGATGACCTaGAGGTTGATAGTTGAGTGCTGTCACTTGGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: ILLYSFGQCRMT*RLIVECCHLVP Trigger: AGGCACCAAGTGACAGCACTCAACTATCAACCTCAAGGTCATCCTACATTGGCCAAAGGAATAAAGAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000416327.5 ENST00000420255.1 ENST00000667392.1 ENST00000669715.1 |
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| CDS GCA 72 bp | TTCTATTTCTGCATAAGTTGGAATAACCAGGCATGCTaGTTGACACTCTGCTTTTTAGGAAGATTACCCCAG | + |
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Preference number: 6 (lower is better) Translates to: FYFCISWNNQAC*LTLCFLGRLPQ Trigger: CTGGGGTAATCTTCCTAAAAAGCAGAGTGTCAAGCAGCATGCCTGGTTATTCCAACTTATGCAGAAATAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000666229.1 ENST00000669715.1 |
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| CDS CAA 72 bp | CTTCATTGTCTGGCCTCCTGGAGAGAACTTTTACCTTaGTTCCAATTTAATTTGGACTCGTCAGAGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: LHCLASWRELLP*FQFNLDSSEKS Trigger: TGACTTCTCTGACGAGTCCAAATTAAATTGGAACAAAGGTAAAAGTTCTCTCCAGGAGGCCAGACAATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416327.5 ENST00000667392.1 |
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| CDS CAA 72 bp | CACTATGATCTAGAAGCTATGTTTGATCTGAGCCCTTaGTACCTTTTCAAACATGCATTGCTCCACTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: HYDLEAMFDLSP*YLFKHALLHCL Trigger: GAGACAGTGGAGCAATGCATGTTTGAAAAGGTACAAAGGGCTCAGATCAAACATAGCTTCTAGATCATAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656955.1 |
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| CDS CAA 72 bp | ACGCCAAACCTCAGTAACACAAAATTTGTCCATGTGTaGAACCTGAAGATGTACACCTTAAACCCATTCCCT | + |
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Preference number: 6 (lower is better) Translates to: TPNLSNTKFVHV*NLKMYTLNPFP Trigger: AGGGAATGGGTTTAAGGTGTACATCTTCAGGTTCAACACATGGACAAATTTTGTGTTACTGAGGTTTGGCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000656955.1 ENST00000666229.1 ENST00000667392.1 ENST00000667604.1 ENST00000669715.1 |
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| CDS CAA 90 bp | CTGCCTGTTCTTCATTGTCTGGCCTCCTGGAGAGAACTTTTACCTTaGTTCCAATTTAATTTGGACTCGTCAGAGAAGTCATTATTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LPVLHCLASWRELLP*FQFNLDSSEKSLFP Trigger: TGGAAATAATGACTTCTCTGACGAGTCCAAATTAAATTGGAACAAAGGTAAAAGTTCTCTCCAGGAGGCCAGACAATGAAGAACAGGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416327.5 ENST00000667392.1 |
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| CDS CAA 90 bp | GGACACTTCTATTTCTGCATAAGTTGGAATAACCAGGCATGCTGCTaGACACTCTGCTTTTTAGGAAGATTACCCCAGATAATAGATATG | + |
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Preference number: 6 (lower is better) Translates to: GHFYFCISWNNQACC*TLCFLGRLPQIIDM Trigger: CATATCTATTATCTGGGGTAATCTTCCTAAAAAGCAGAGTGTCAAGCAGCATGCCTGGTTATTCCAACTTATGCAGAAATAGAAGTGTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000666229.1 ENST00000669715.1 |
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| CDS TCA 72 bp | CTCATCATAACAACAACTCTGTGTTTTCTAAGGAGATaGACACTTTCTCGACAACTCCACTCTTCCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LIITTTLCFLRR*TLSRQLHSSLS Trigger: AGAAAGGGAAGAGTGGAGTTGTCGAGAAAGTGTTCATCTCCTTAGAAAACACAGAGTTGTTGTTATGATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419467.1 |
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| CDS TCA 72 bp | CACTGGTTGTTAGAGAAATGCAAATCAAAACCACAATaGGATACCATCTCATGCCAGTTAGAATGGCGATCA | + |
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Preference number: 6 (lower is better) Translates to: HWLLEKCKSKPQ*DTISCQLEWRS Trigger: TGATCGCCATTCTAACTGGCATGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTAACAACCAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656955.1 ENST00000667604.1 |
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| CDS CCA 72 bp | GATAATAGATATGCAGCAGGGATGCAGCAGGTTCATTaGAGACTCATCATAACAACAACTCTGTGTTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: DNRYAAGMQQVH*RLIITTTLCFL Trigger: TAGAAAACACAGAGTTGTTGTTATGATGAGTCTCCAATGAACCTGCTGCATCCCTGCTGCATATCTATTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419467.1 |
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| CDS CCA 72 bp | CCTGGAGAGAACTTTTACCTTTGTTCCAATTTAATTTaGACTCGTCAGAGAAGTCATTATTTCCAGACCCAC | + |
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Preference number: 6 (lower is better) Translates to: PGENFYLCSNLI*TRQRSHYFQTH Trigger: GTGGGTCTGGAAATAATGACTTCTCTGACGAGTCCAAATTAAATTGGAACAAAGGTAAAAGTTCTCTCCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416327.5 ENST00000667392.1 |
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| CDS CCA 72 bp | GATAATAGATATGCAGCAGGGATGCAGCAGGTTCATTaGAGACTCATCATAACAACAACTCTCTGTATAACA | + |
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Preference number: 6 (lower is better) Translates to: DNRYAAGMQQVH*RLIITTTLCIT Trigger: TGTTATACAGAGAGTTGTTGTTATGATGAGTCTCCAATGAACCTGCTGCATCCCTGCTGCATATCTATTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669715.1 |
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| CDS CAA 72 bp | TATTTCTGCATAAGTTGGAATAACCAGGCATGCTGCTaGACACTCTGCTTTTTAGGAAGATTACCCCAGATA | + |
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Preference number: 6 (lower is better) Translates to: YFCISWNNQACC*TLCFLGRLPQI Trigger: TATCTGGGGTAATCTTCCTAAAAAGCAGAGTGTCAAGCAGCATGCCTGGTTATTCCAACTTATGCAGAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000666229.1 ENST00000669715.1 |
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| CDS TCA 72 bp | CATTGGAGACTCATCATAACAACAACTCTCTGCAAGTaGAGGAAGCAGAACTGTATAACAAATGTTTCCATC | + |
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Preference number: 6 (lower is better) Translates to: HWRLIITTTLCK*RKQNCITNVSI Trigger: GATGGAAACATTTGTTATACAGTTCTGCTTCCTTCACTTGCAGAGAGTTGTTGTTATGATGAGTCTCCAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420255.1 |
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| CDS GCA 72 bp | ATAAGTTGGAATAACCAGGCATGCTGCTTGACACTCTaGTTTTTAGGAAGATTACCCCAGATAATAGATATG | + |
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Preference number: 6 (lower is better) Translates to: ISWNNQACCLTL*FLGRLPQIIDM Trigger: CATATCTATTATCTGGGGTAATCTTCCTAAAAAGCAGAGTGTCAAGCAGCATGCCTGGTTATTCCAACTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000419467.1 ENST00000420255.1 ENST00000666229.1 ENST00000669715.1 |
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| CDS CCA 72 bp | GGTTGTAGAGAAATAGGAAGGCTTTTACACTGTTGGTaGGCGTATAAATTAGTTCAACCATTGTGTAAGACA | + |
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Preference number: 6 (lower is better) Translates to: GCREIGRLLHCW*AYKLVQPLCKT Trigger: TGTCTTACACAATGGTTGAACTAATTTATACGCCCACCAACAGTGTAAAAGCCTTCCTATTTCTCTACAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656955.1 ENST00000667604.1 |
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| CDS CCA 72 bp | AGAGGTTGTAGAGAAATAGGAAGGCTTTTACACTGTTaGTGGGCGTATAAATTAGTTCAACCATTGTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: RGCREIGRLLHC*WAYKLVQPLCK Trigger: CTTACACAATGGTTGAACTAATTTATACGCCCACCAACAGTGTAAAAGCCTTCCTATTTCTCTACAACCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656955.1 ENST00000667604.1 |
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| CDS CAA 72 bp | TCCTGGAGAGAACTTTTACCTTTGTTCCAATTTAATTaGGACTCGTCAGAGAAGTCATTATTTCCAGACCCA | + |
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Preference number: 6 (lower is better) Translates to: SWRELLPLFQFN*DSSEKSLFPDP Trigger: TGGGTCTGGAAATAATGACTTCTCTGACGAGTCCAAATTAAATTGGAACAAAGGTAAAAGTTCTCTCCAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416327.5 ENST00000667392.1 |
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| CDS CCA 72 bp | CTCGTCAGAGAAGTCATTATTTCCAGACCCACCAATTaGGTGGTGCTAAAAGAACATTACATTCTTATTTTA | + |
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Preference number: 6 (lower is better) Translates to: LVREVIISRPTN*VVLKEHYILIL Trigger: TAAAATAAGAATGTAATGTTCTTTTAGCACCACCCAATTGGTGGGTCTGGAAATAATGACTTCTCTGACGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000416327.5 ENST00000667392.1 |
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| CDS TCA 72 bp | ATATCACAAATTACATACTTAAAGCTGCTGTTGGTTTaGATGACTAACAAAAGGAATCTACACCTTGCACGT | + |
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Preference number: 6 (lower is better) Translates to: ISQITYLKLLLV*MTNKRNLHLAR Trigger: ACGTGCAAGGTGTAGATTCCTTTTGTTAGTCATTCAAACCAACAGCAGCTTTAAGTATGTAATTTGTGATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000416327.5 ENST00000420255.1 ENST00000667392.1 ENST00000669715.1 |
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| CDS TCA 72 bp | TCTTTCATGTCGACACTTTCTTCTATATGTCACATCTaGATATTGGAATTCCTTCTGAGCTTCTTTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SFMSTLSSICHI*ILEFLLSFFSL Trigger: AAGAGAAAAGAAGCTCAGAAGGAATTCCAATATTCAGATGTGACATATAGAAGAAAGTGTCGACATGAAAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656955.1 ENST00000666229.1 ENST00000667392.1 |
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