Pregenerated sensors for LINC01686 (Homo sapiens)
Ensembl gene IDs: ENSG00000261504Ensembl transcript IDs: ENST00000566297.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTTTCTCCGCAGCCTGAGAGGGCCAGTGGGGCCGCCGCTGCTTCCTaGAAGAGCTTCGCCTTCCGGAGCCGCAGGCCGCGGAGCTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: LSPQPERASGAAAAS*KSFAFRSRRPRSSQ Trigger: TTGTGAGCTCCGCGGCCTGCGGCTCCGGAAGGCGAAGCTCTTCCAGGAAGCAGCGGCGGCCCCACTGGCCCTCTCAGGCTGCGGAGAAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 90 bp | AGCCCTCCCCCTCCGCTGTGCTCAGGTCTGTATGCTCAGCAGCACTaGGAATGGTGCCAGAGGCTGCGCGTTTGCCCAGTACAGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPPPPLCSGLYAQQH*EWCQRLRVCPVQLG Trigger: TCCAAGCTGTACTGGGCAAACGCGCAGCCTCTGGCACCATTCCCAGTGCTGCTGAGCATACAGACCTGAGCACAGCGGAGGGGGAGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 90 bp | AGGCACACTCTGGAGGTGGTGATGCAATGCAAAGAAATGGGGTGGTaGAGAATCCGCTGTGGGGTCCGCGGTGGCTGCCGCATCCGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RHTLEVVMQCKEMGW*RIRCGVRGGCRIRF Trigger: AAACCGGATGCGGCAGCCACCGCGGACCCCACAGCGGATTCTCCACCACCCCATTTCTTTGCATTGCATCACCACCTCCAGAGTGTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 90 bp | ATTAGGCACACTCTGGAGGTGGTGATGCAATGCAAAGAAATGGGGTaGTGGAGAATCCGCTGTGGGGTCCGCGGTGGCTGCCGCATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: IRHTLEVVMQCKEMG*WRIRCGVRGGCRIR Trigger: CCGGATGCGGCAGCCACCGCGGACCCCACAGCGGATTCTCCACCACCCCATTTCTTTGCATTGCATCACCACCTCCAGAGTGTGCCTAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 90 bp | CCCCCTCCGCTGTGCTCAGGTCTGTATGCTCAGCAGCACTGGGAATaGTGCCAGAGGCTGCGCGTTTGCCCAGTACAGCTTGGAGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPPLCSGLYAQQHWE*CQRLRVCPVQLGVL Trigger: CAAAACTCCAAGCTGTACTGGGCAAACGCGCAGCCTCTGGCACCATTCCCAGTGCTGCTGAGCATACAGACCTGAGCACAGCGGAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 90 bp | GGCGGCAGAGCCAGCGGGGTGTCTGGGGAGTTCCAGCGTTGGTTGTaGAGTAGGATGTGGTGTCTAGCTTTCAGCAGTAGCACCTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGRASGVSGEFQRWL*SRMWCLAFSSSTCL Trigger: CAAACAGGTGCTACTGCTGAAAGCTAGACACCACATCCTACTCCACAACCAACGCTGGAACTCCCCAGACACCCCGCTGGCTCTGCCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS GCA 90 bp | CCTCCGCTGTGCTCAGGTCTGTATGCTCAGCAGCACTGGGAATGGTaGCAGAGGCTGCGCGTTTGCCCAGTACAGCTTGGAGTTTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPLCSGLYAQQHWEW*QRLRVCPVQLGVLH Trigger: ATGCAAAACTCCAAGCTGTACTGGGCAAACGCGCAGCCTCTGGCACCATTCCCAGTGCTGCTGAGCATACAGACCTGAGCACAGCGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS TCA 90 bp | CTCCACCCCCACACTCTGGGAGCGATCCTTTCCCAAGGGTCAGGCTaGAAGTTTGCCAGATTGGAATTTCGGGTCTGCTGGGTCACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LHPHTLGAILSQGSG*KFARLEFRVCWVTE Trigger: CTCTGTGACCCAGCAGACCCGAAATTCCAATCTGGCAAACTTTCAGCCTGACCCTTGGGAAAGGATCGCTCCCAGAGTGTGGGGGTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS TCA 90 bp | GCATCAGAAGCAGCGGGGTGCCAATTAGGCACACTCTGGAGGTGGTaGTGCAATGCAAAGAAATGGGGTGGTGGAGAATCCGCTGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASEAAGCQLGTLWRW*CNAKKWGGGESAVG Trigger: CCCCACAGCGGATTCTCCACCACCCCATTTCTTTGCATTGCATCACCACCTCCAGAGTGTGCCTAATTGGCACCCCGCTGCTTCTGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS GCA 90 bp | CCACACTCTGGGAGCGATCCTTTCCCAAGGGTCAGGCTGAAAGTTTaGCAGATTGGAATTTCGGGTCTGCTGGGTCACAGAGCCAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PHSGSDPFPRVRLKV*QIGISGLLGHRAKG Trigger: GCCCTTGGCTCTGTGACCCAGCAGACCCGAAATTCCAATCTGGCAAACTTTCAGCCTGACCCTTGGGAAAGGATCGCTCCCAGAGTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS GCA 90 bp | AATGGTGCCAGAGGCTGCGCGTTTGCCCAGTACAGCTTGGAGTTTTaGATCAGAAGCAGCGGGGTGCCAATTAGGCACACTCTGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NGARGCAFAQYSLEF*IRSSGVPIRHTLEV Trigger: CACCTCCAGAGTGTGCCTAATTGGCACCCCGCTGCTTCTGATGCAAAACTCCAAGCTGTACTGGGCAAACGCGCAGCCTCTGGCACCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 90 bp | TGGGAGCGATCCTTTCCCAAGGGTCAGGCTGAAAGTTTGCCAGATTaGAATTTCGGGTCTGCTGGGTCACAGAGCCAAGGGCCCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WERSFPKGQAESLPD*NFGSAGSQSQGPSL Trigger: AAGACTGGGCCCTTGGCTCTGTGACCCAGCAGACCCGAAATTCCAATCTGGCAAACTTTCAGCCTGACCCTTGGGAAAGGATCGCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS TCA 90 bp | TTTCGGGTCTGCTGGGTCACAGAGCCAAGGGCCCAGTCTTCAAGGTaGTCTCCACTTCGGAGCACTTTATGCCGCCCACGTTTTGTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: FRVCWVTEPRAQSSR*SPLRSTLCRPRFVL Trigger: TAGAACAAAACGTGGGCGGCATAAAGTGCTCCGAAGTGGAGATCACCTTGAAGACTGGGCCCTTGGCTCTGTGACCCAGCAGACCCGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 90 bp | AGCGGGGTGTCTGGGGAGTTCCAGCGTTGGTTGTGGAGTAGGATGTaGTGTCTAGCTTTCAGCAGTAGCACCTGTTTGGTCCTCATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SGVSGEFQRWLWSRM*CLAFSSSTCLVLIK Trigger: TTTGATGAGGACCAAACAGGTGCTACTGCTGAAAGCTAGACACCACATCCTACTCCACAACCAACGCTGGAACTCCCCAGACACCCCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 90 bp | GAGCACTTTATGCCGCCCACGTTTTGTTCTATAACAATCCCAAACTaGCCCTCCGAGCCTGGGAAGTCGAGTTTCTCCGAAACCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EHFMPPTFCSITIPN*PSEPGKSSFSETTE Trigger: CTCAGTGGTTTCGGAGAAACTCGACTTCCCAGGCTCGGAGGGCCAGTTTGGGATTGTTATAGAACAAAACGTGGGCGGCATAAAGTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 90 bp | GTTAAGCCCACAGAGGCTGGGGCCAGACTGCCTGGCTTTGAATGGTaGCTCTACAATTGTGAGATTAACAGCCCCTACTTAAGGTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VKPTEAGARLPGFEW*LYNCEINSPYLRLW Trigger: CCACAACCTTAAGTAGGGGCTGTTAATCTCACAATTGTAGAGCCACCATTCAAAGCCAGGCAGTCTGGCCCCAGCCTCTGTGGGCTTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 90 bp | GTGGTTAAGCCCACAGAGGCTGGGGCCAGACTGCCTGGCTTTGAATaGTGGCTCTACAATTGTGAGATTAACAGCCCCTACTTAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VVKPTEAGARLPGFE*WLYNCEINSPYLRL Trigger: CAACCTTAAGTAGGGGCTGTTAATCTCACAATTGTAGAGCCACCATTCAAAGCCAGGCAGTCTGGCCCCAGCCTCTGTGGGCTTAACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS TCA 90 bp | ATTCCTTTATGGGATGAATCTCCACTGACAATTATTTTACCAATTTaGAACTTGTTCATGATCTTTCTTCGCTTCCAGAATGCAAGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: IPLWDESPLTIILPI*NLFMIFLRFQNASY Trigger: GTAGCTTGCATTCTGGAAGCGAAGAAAGATCATGAACAAGTTTCAAATTGGTAAAATAATTGTCAGTGGAGATTCATCCCATAAAGGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 72 bp | CCTGGGAAGTCGAGTTTCTCCGAAACCACTGAGTCCTaGAGAGCCCCGCGGCCTCCCGCCCTTTCTCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGKSSFSETTES*RAPRPPALSPQ Trigger: CTGCGGAGAAAGGGCGGGAGGCCGCGGGGCTCTCCAGGACTCAGTGGTTTCGGAGAAACTCGACTTCCCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS GCA 72 bp | AGGGACCTCGTCTGCTGTCGTCACCATGCCTTTCCCTaGCAGGCTCCTAGGAGCTGCTTGGCGGCGGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RDLVCCRHHAFP*QAPRSCLAAGS Trigger: ACTACCCGCCGCCAAGCAGCTCCTAGGAGCCTGGCAGGGAAAGGCATGGTGACGACAGCAGACGAGGTCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 72 bp | CTGGAGGTGGTGATGCAATGCAAAGAAATGGGGTGGTaGAGAATCCGCTGTGGGGTCCGCGGTGGCTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LEVVMQCKEMGW*RIRCGVRGGCR Trigger: GCGGCAGCCACCGCGGACCCCACAGCGGATTCTCCACCACCCCATTTCTTTGCATTGCATCACCACCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 72 bp | ACTCTGGAGGTGGTGATGCAATGCAAAGAAATGGGGTaGTGGAGAATCCGCTGTGGGGTCCGCGGTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TLEVVMQCKEMG*WRIRCGVRGGC Trigger: GCAGCCACCGCGGACCCCACAGCGGATTCTCCACCACCCCATTTCTTTGCATTGCATCACCACCTCCAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS TCA 72 bp | TGCTGGGTCACAGAGCCAAGGGCCCAGTCTTCAAGGTaGTCTCCACTTCGGAGCACTTTATGCCGCCCACGT | + |
|
Preference number: 6 (lower is better) Translates to: CWVTEPRAQSSR*SPLRSTLCRPR Trigger: ACGTGGGCGGCATAAAGTGCTCCGAAGTGGAGATCACCTTGAAGACTGGGCCCTTGGCTCTGTGACCCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 72 bp | CTGTGCTCAGGTCTGTATGCTCAGCAGCACTGGGAATaGTGCCAGAGGCTGCGCGTTTGCCCAGTACAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LCSGLYAQQHWE*CQRLRVCPVQL Trigger: AAGCTGTACTGGGCAAACGCGCAGCCTCTGGCACCATTCCCAGTGCTGCTGAGCATACAGACCTGAGCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CAA 90 bp | CCCACACTCTGGGAGCGATCCTTTCCCAAGGGTCAGGCTGAAAGTTaGCCAGATTGGAATTTCGGGTCTGCTGGGTCACAGAGCCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PTLWERSFPKGQAES*PDWNFGSAGSQSQG Trigger: CCCTTGGCTCTGTGACCCAGCAGACCCGAAATTCCAATCTGGCAAACTTTCAGCCTGACCCTTGGGAAAGGATCGCTCCCAGAGTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CAA 90 bp | AGCACTGGGAATGGTGCCAGAGGCTGCGCGTTTGCCCAGTACAGCTaGGAGTTTTGCATCAGAAGCAGCGGGGTGCCAATTAGGCACACT | + |
|
Preference number: 6 (lower is better) Translates to: STGNGARGCAFAQYS*EFCIRSSGVPIRHT Trigger: AGTGTGCCTAATTGGCACCCCGCTGCTTCTGATGCAAAACTCCAAGCTGTACTGGGCAAACGCGCAGCCTCTGGCACCATTCCCAGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CAA 72 bp | AGAGCCAGCGGGGTGTCTGGGGAGTTCCAGCGTTGGTaGTGGAGTAGGATGTGGTGTCTAGCTTTCAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RASGVSGEFQRW*WSRMWCLAFSS Trigger: ACTGCTGAAAGCTAGACACCACATCCTACTCCACAACCAACGCTGGAACTCCCCAGACACCCCGCTGGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS TCA 72 bp | GCAGCGGGGTGCCAATTAGGCACACTCTGGAGGTGGTaGTGCAATGCAAAGAAATGGGGTGGTGGAGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: AAGCQLGTLWRW*CNAKKWGGGES Trigger: GGATTCTCCACCACCCCATTTCTTTGCATTGCATCACCACCTCCAGAGTGTGCCTAATTGGCACCCCGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS TCA 72 bp | GGTCGTGTGTGTTTGATGGGATTTCAACAGCGTGGATaGATTGTAAGTCCCCCTCCCCACCAAGCCCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GRVCLMGFQQRG*IVSPPPHQALP Trigger: GGGGAGGGCTTGGTGGGGAGGGGGACTTACAATTCATCCACGCTGTTGAAATCCCATCAAACACACACGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS GCA 72 bp | AGAGGCTGCGCGTTTGCCCAGTACAGCTTGGAGTTTTaGATCAGAAGCAGCGGGGTGCCAATTAGGCACACT | + |
|
Preference number: 6 (lower is better) Translates to: RGCAFAQYSLEF*IRSSGVPIRHT Trigger: AGTGTGCCTAATTGGCACCCCGCTGCTTCTGATGCAAAACTCCAAGCTGTACTGGGCAAACGCGCAGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS GCA 72 bp | GGGAGCGATCCTTTCCCAAGGGTCAGGCTGAAAGTTTaGCAGATTGGAATTTCGGGTCTGCTGGGTCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: GSDPFPRVRLKV*QIGISGLLGHR Trigger: TCTGTGACCCAGCAGACCCGAAATTCCAATCTGGCAAACTTTCAGCCTGACCCTTGGGAAAGGATCGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 72 bp | TCCTTTCCCAAGGGTCAGGCTGAAAGTTTGCCAGATTaGAATTTCGGGTCTGCTGGGTCACAGAGCCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SFPKGQAESLPD*NFGSAGSQSQG Trigger: CCCTTGGCTCTGTGACCCAGCAGACCCGAAATTCCAATCTGGCAAACTTTCAGCCTGACCCTTGGGAAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CAA 72 bp | TGGGAGCGATCCTTTCCCAAGGGTCAGGCTGAAAGTTaGCCAGATTGGAATTTCGGGTCTGCTGGGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: WERSFPKGQAES*PDWNFGSAGSQ Trigger: CTGTGACCCAGCAGACCCGAAATTCCAATCTGGCAAACTTTCAGCCTGACCCTTGGGAAAGGATCGCTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 72 bp | ATGCCGCCCACGTTTTGTTCTATAACAATCCCAAACTaGCCCTCCGAGCCTGGGAAGTCGAGTTTCTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: MPPTFCSITIPN*PSEPGKSSFSE Trigger: TTCGGAGAAACTCGACTTCCCAGGCTCGGAGGGCCAGTTTGGGATTGTTATAGAACAAAACGTGGGCGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 72 bp | TCTGGGGAGTTCCAGCGTTGGTTGTGGAGTAGGATGTaGTGTCTAGCTTTCAGCAGTAGCACCTGTTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SGEFQRWLWSRM*CLAFSSSTCLV Trigger: GACCAAACAGGTGCTACTGCTGAAAGCTAGACACCACATCCTACTCCACAACCAACGCTGGAACTCCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 72 bp | ACTGGGTCGTGTGTGTTTGATGGGATTTCAACAGCGTaGATGAATTGTAAGTCCCCCTCCCCACCAAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: TGSCVFDGISTA*MNCKSPSPPSP Trigger: AGGGCTTGGTGGGGAGGGGGACTTACAATTCATCCACGCTGTTGAAATCCCATCAAACACACACGACCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CAA 72 bp | GATCTCCACTTCGGAGCACTTTATGCCGCCCACGTTTaGTTCTATAACAATCCCAAACTGGCCCTCCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: DLHFGALYAAHV*FYNNPKLALRA Trigger: GGCTCGGAGGGCCAGTTTGGGATTGTTATAGAACAAAACGTGGGCGGCATAAAGTGCTCCGAAGTGGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CAA 90 bp | CTTCAAGGTGATCTCCACTTCGGAGCACTTTATGCCGCCCACGTTTaGTTCTATAACAATCCCAAACTGGCCCTCCGAGCCTGGGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LQGDLHFGALYAAHV*FYNNPKLALRAWEV Trigger: GACTTCCCAGGCTCGGAGGGCCAGTTTGGGATTGTTATAGAACAAAACGTGGGCGGCATAAAGTGCTCCGAAGTGGAGATCACCTTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CCA 72 bp | ACAGAGGCTGGGGCCAGACTGCCTGGCTTTGAATGGTaGCTCTACAATTGTGAGATTAACAGCCCCTACTTA | + |
|
Preference number: 6 (lower is better) Translates to: TEAGARLPGFEW*LYNCEINSPYL Trigger: TAAGTAGGGGCTGTTAATCTCACAATTGTAGAGCCACCATTCAAAGCCAGGCAGTCTGGCCCCAGCCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CAA 72 bp | TTTGGTCCTCATCAAAGTGGTTTAGAGGAGGGACTTTaGGCTGCGGAGCCTCCCTTTGTTCTTGTCTGTATT | + |
|
Preference number: 6 (lower is better) Translates to: FGPHQSGLEEGL*AAEPPFVLVCI Trigger: AATACAGACAAGAACAAAGGGAGGCTCCGCAGCCAAAAGTCCCTCCTCTAAACCACTTTGATGAGGACCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS CAA 90 bp | CAGGCACGTACTGTTTATGAATGGATGCACTTAGCAGAAATTCAGTaGAGAATAACGGTTGTTTTTCAGGATTTTAAGATCTTTGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QARTVYEWMHLAEIQ*RITVVFQDFKIFVP Trigger: TGGGACAAAGATCTTAAAATCCTGAAAAACAACCGTTATTCTCAACTGAATTTCTGCTAAGTGCATCCATTCATAAACAGTACGTGCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||
| CDS TCA 72 bp | TGGGATGAATCTCCACTGACAATTATTTTACCAATTTaGAACTTGTTCATGATCTTTCTTCGCTTCCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: WDESPLTIILPI*NLFMIFLRFQN Trigger: ATTCTGGAAGCGAAGAAAGATCATGAACAAGTTTCAAATTGGTAAAATAATTGTCAGTGGAGATTCATCCCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566297.1 |
||