Pregenerated sensors for LINC01685 (Homo sapiens)
Ensembl gene IDs: ENSG00000238063Ensembl transcript IDs: ENST00000452971.2, ENST00000634298.1, ENST00000634464.2, ENST00000634732.1, ENST00000654266.1, ENST00000658172.1, ENST00000658241.1, ENST00000658281.1, ENST00000658664.1, ENST00000658751.1, ENST00000658851.1, ENST00000658982.1, ENST00000659619.1, ENST00000660113.1, ENST00000665359.1, ENST00000671197.1
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAAAACAAAGTGGGCCGCAGTTACCCTGGATCCGGCCGGTTTCGCTaGTCCGCGGCCAGCCCCAGCCTCCCGGGAGCAGGAGAAGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: ENKVGRSYPGSGRFR*SAASPSLPGAGEGG Trigger: GCCGCCTTCTCCTGCTCCCGGGAGGCTGGGGCTGGCCGCGGAGCAGCGAAACCGGCCGGATCCAGGGTAACTGCGGCCCACTTTGTTTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000634732.1 ENST00000658982.1 ENST00000660113.1 |
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| CDS CCA 90 bp | AATGAAAGATTTGTCCGCAGCAGCGGGGGCCGGCTGAAAACAAAGTaGGCCGCAGTTACCCTGGATCCGGCCGGTTTCGCTGCTCCGCGG | + |
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Preference number: 5 (lower is better) Translates to: NERFVRSSGGRLKTK*AAVTLDPAGFAAPR Trigger: CCGCGGAGCAGCGAAACCGGCCGGATCCAGGGTAACTGCGGCCCACTTTGTTTTCAGCCGGCCCCCGCTGCTGCGGACAAATCTTTCATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000634732.1 ENST00000658982.1 ENST00000660113.1 |
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| CDS CCA 90 bp | CAAAAGCACGGGTTGCTCCAGGAAGGGTACAGGCGGCAAAAGCCGTaGCCATCCGCGGAAAGAATTAAAGGAGCGAGAAAGCCCGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: QKHGLLQEGYRRQKP*PSAERIKGARKPER Trigger: CCTCTCGGGCTTTCTCGCTCCTTTAATTCTTTCCGCGGATGGCCACGGCTTTTGCCGCCTGTACCCTTCCTGGAGCAACCCGTGCTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS GCA 90 bp | GCAGCGGTCCTTCTGGGACGCGTCTCACCTAGCTCGCAGCAAATATaGCATCCATATGCCCAGGATCACAACCGAATCAGCTCCATCAGG | + |
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Preference number: 5 (lower is better) Translates to: AAVLLGRVSPSSQQI*HPYAQDHNRISSIR Trigger: CCTGATGGAGCTGATTCGGTTGTGATCCTGGGCATATGGATGGCATATTTGCTGCGAGCTAGGTGAGACGCGTCCCAGAAGGACCGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634732.1 ENST00000658982.1 ENST00000660113.1 |
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| CDS TCA 90 bp | AGAGGGGCCAGCTGCCGCTGTGAAATGTTCCTCGTTTACAGTTGTTaGGTGTCCCTGCCCTTGGCTGTGGTCTGTCAAGCAGGTTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: RGASCRCEMFLVYSC*VSLPLAVVCQAGLG Trigger: TCCCAAACCTGCTTGACAGACCACAGCCAAGGGCAGGGACACTCAACAACTGTAAACGAGGAACATTTCACAGCGGCAGCTGGCCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS GCA 90 bp | GCTGCCGCTGTGAAATGTTCCTCGTTTACAGTTGTTGAGTGTCCCTaGCCTTGGCTGTGGTCTGTCAAGCAGGTTTGGGATCAGGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: AAAVKCSSFTVVECP*PWLWSVKQVWDQGV Trigger: GACCCCCTGATCCCAAACCTGCTTGACAGACCACAGCCAAGGGCAGGGACACTCAACAACTGTAAACGAGGAACATTTCACAGCGGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS GCA 90 bp | GGTGTTCTTCTGGAGGCCAAGGGAACAAGGACACACACGGAAAGATaGCGTGGGCCGGAGAGTAAAGCTCACTTGTCTCGCTGTGACTTC | + |
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Preference number: 5 (lower is better) Translates to: GVLLEAKGTRTHTER*RGPESKAHLSRCDF Trigger: GAAGTCACAGCGAGACAAGTGAGCTTTACTCTCCGGCCCACGGCATCTTTCCGTGTGTGTCCTTGTTCCCTTGGCCTCCAGAAGAACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658241.1 |
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| CDS TCA 90 bp | AACTACTCTGTTGAAAGACAGGGCTGGCTAGTGGCGAAACTGCAGTaGGGAATCTTCAGCCTTAGAGATGCCCCCGTCCCTACCCCATTT | + |
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Preference number: 5 (lower is better) Translates to: NYSVERQGWLVAKLQ*GIFSLRDAPVPTPF Trigger: AAATGGGGTAGGGACGGGGGCATCTCTAAGGCTGAAGATTCCTCACTGCAGTTTCGCCACTAGCCAGCCCTGTCTTTCAACAGAGTAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654266.1 |
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| CDS CCA 90 bp | GCTGTGAAATGTTCCTCGTTTACAGTTGTTGAGTGTCCCTGCCCTTaGCTGTGGTCTGTCAAGCAGGTTTGGGATCAGGGGGTCTTTTGC | + |
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Preference number: 5 (lower is better) Translates to: AVKCSSFTVVECPCP*LWSVKQVWDQGVFC Trigger: GCAAAAGACCCCCTGATCCCAAACCTGCTTGACAGACCACAGCCAAGGGCAGGGACACTCAACAACTGTAAACGAGGAACATTTCACAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS CCA 90 bp | AAATGTTCCTCGTTTACAGTTGTTGAGTGTCCCTGCCCTTGGCTGTaGTCTGTCAAGCAGGTTTGGGATCAGGGGGTCTTTTGCAGCTAC | + |
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Preference number: 5 (lower is better) Translates to: KCSSFTVVECPCPWL*SVKQVWDQGVFCSY Trigger: GTAGCTGCAAAAGACCCCCTGATCCCAAACCTGCTTGACAGACCACAGCCAAGGGCAGGGACACTCAACAACTGTAAACGAGGAACATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS CCA 90 bp | TCAAAGAGTTCCATCTGTAGCCTCATTCCTTCCGCTGAAAGTCCTTaGGCAACTCATTCCACCCACTGGCGCTATCGTGTCTTCATCCCT | + |
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Preference number: 5 (lower is better) Translates to: SKSSICSLIPSAESP*ATHSTHWRYRVFIP Trigger: AGGGATGAAGACACGATAGCGCCAGTGGGTGGAATGAGTTGCCCAAGGACTTTCAGCGGAAGGAATGAGGCTACAGATGGAACTCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659619.1 |
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| CDS CCA 90 bp | ACACTGCCACTCACTGAAAGTCCTTGGGCAACTCATTCCACCCACTaGCGCTATCGTGTCTTCATCCCTGTTTACACTCTTTCCTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: TLPLTESPWATHSTH*RYRVFIPVYTLSFW Trigger: CCAAAAGGAAAGAGTGTAAACAGGGATGAAGACACGATAGCGCCAGTGGGTGGAATGAGTTGCCCAAGGACTTTCAGTGAGTGGCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658851.1 ENST00000671197.1 |
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| CDS CCA 90 bp | CAGAAGGACAGCGGTTGTGTACACATCCCAAACTGCCAAGAAACCTaGGTGGCCATGAGCATTGAGCTTAATCAAAGATCTGCTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: QKDSGCVHIPNCQET*VAMSIELNQRSALL Trigger: GAGAAGAGCAGATCTTTGATTAAGCTCAATGCTCATGGCCACCCAGGTTTCTTGGCAGTTTGGGATGTGTACACAACCGCTGTCCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658851.1 |
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| CDS CCA 90 bp | CTCATTCCTTCCGCTGAAAGTCCTTGGGCAACTCATTCCACCCACTaGCGCTATCGTGTCTTCATCCCTTTGAACAAGACAGGTTTTCTA | + |
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Preference number: 5 (lower is better) Translates to: LIPSAESPWATHSTH*RYRVFIPLNKTGFL Trigger: TAGAAAACCTGTCTTGTTCAAAGGGATGAAGACACGATAGCGCCAGTGGGTGGAATGAGTTGCCCAAGGACTTTCAGCGGAAGGAATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659619.1 |
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| CDS CCA 90 bp | ACACTGCCACTCACTGAAAGTCCTTGGGCAACTCATTCCACCCACTaGCGCTATCGTGTCTTCATCCCTTTGAACAAGACAGGTTTTCTA | + |
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Preference number: 5 (lower is better) Translates to: TLPLTESPWATHSTH*RYRVFIPLNKTGFL Trigger: TAGAAAACCTGTCTTGTTCAAAGGGATGAAGACACGATAGCGCCAGTGGGTGGAATGAGTTGCCCAAGGACTTTCAGTGAGTGGCAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658172.1 |
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| CDS TCA 90 bp | AAAGAATTAAAGGAGCGAGAAAGCCCGAGAGGCTGCGATCAGGGTTaGATCAGAGATTCAGGCAGTCACTGCCAAAATGCATGGAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: KELKERESPRGCDQG*IRDSGSHCQNAWKS Trigger: TGACTTCCATGCATTTTGGCAGTGACTGCCTGAATCTCTGATTCAACCCTGATCGCAGCCTCTCGGGCTTTCTCGCTCCTTTAATTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS TCA 90 bp | CTTTCTGGGTCTTGTTGTGAAATCCTGCTCAAACTTGAAAGCCACTaGCCTTTCCCTGGAGCTCCCTTTAGCGTTCCGCACAATGTCATT | + |
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Preference number: 5 (lower is better) Translates to: LSGSCCEILLKLESH*PFPGAPFSVPHNVI Trigger: AATGACATTGTGCGGAACGCTAAAGGGAGCTCCAGGGAAAGGTCAGTGGCTTTCAAGTTTGAGCAGGATTTCACAACAAGACCCAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654266.1 |
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| CDS TCA 90 bp | GCGGTTGTGTACACATCCCAAACTGCCAAGAAACCTGGGTGGCCATaGGCATTGAGCTTAATCAAAGATCTGCTCTTCTCTAACAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: AVVYTSQTAKKPGWP*ALSLIKDLLFSNSK Trigger: TTTGCTGTTAGAGAAGAGCAGATCTTTGATTAAGCTCAATGCTCATGGCCACCCAGGTTTCTTGGCAGTTTGGGATGTGTACACAACCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658851.1 |
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| CDS GCA 90 bp | GAATCAGAGATTCAGGCAGTCACTGCCAAAATGCATGGAAGTCATTaGCAAGACATAAAAGGTCAGAGGATACCAGCCGTGAGAAGAACC | + |
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Preference number: 5 (lower is better) Translates to: ESEIQAVTAKMHGSH*QDIKGQRIPAVRRT Trigger: GGTTCTTCTCACGGCTGGTATCCTCTGACCTTTTATGTCTTGGCAATGACTTCCATGCATTTTGGCAGTGACTGCCTGAATCTCTGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS GCA 90 bp | AAATATGGGATGCAGAAGGACAGCGGTTGTGTACACATCCCAAACTaGCAAGAAACCTGGGTGGCCATGAGCATTGAGCTTAATCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: KYGMQKDSGCVHIPN*QETWVAMSIELNQR Trigger: TCTTTGATTAAGCTCAATGCTCATGGCCACCCAGGTTTCTTGGCAGTTTGGGATGTGTACACAACCGCTGTCCTTCTGCATCCCATATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658851.1 |
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| CDS GCA 90 bp | CAAGGCTTGAGTGTCATAATTCCCATTGTGGCCCTAAATATGGGATaGAGAAGGACAGCGGTTGTGTACACATCCCAAACTGCCAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: QGLSVIIPIVALNMG*RRTAVVYTSQTAKK Trigger: TTTCTTGGCAGTTTGGGATGTGTACACAACCGCTGTCCTTCTGCATCCCATATTTAGGGCCACAATGGGAATTATGACACTCAAGCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658851.1 |
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| CDS TCA 90 bp | TTTCACTTGATCTTTGCAGCGTCCCTGATAGTGGTAATGCCACCATaGGCTTTGTCCTCAAACCTCCTCCTCCATCATTTAAAAATCAGA | + |
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Preference number: 5 (lower is better) Translates to: FHLIFAASLIVVMPP*ALSSNLLLHHLKIR Trigger: TCTGATTTTTAAATGATGGAGGAGGAGGTTTGAGGACAAAGCTCATGGTGGCATTACCACTATCAGGGACGCTGCAAAGATCAAGTGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS TCA 90 bp | AGAGCCACCATTGTGCCCGCGCAATTAAACAAGAATGCTCCGACTTaGCAGTTCCACTGTGAAAGTTTTCAAATAGTGTTTGGAATGTTT | + |
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Preference number: 5 (lower is better) Translates to: RATIVPAQLNKNAPT*QFHCESFQIVFGMF Trigger: AAACATTCCAAACACTATTTGAAAACTTTCACAGTGGAACTGTCAAGTCGGAGCATTCTTGTTTAATTGCGCGGGCACAATGGTGGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658241.1 |
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| CDS TCA 90 bp | GCCCGCGCAATTAAACAAGAATGCTCCGACTTGACAGTTCCACTGTaGAAGTTTTCAAATAGTGTTTGGAATGTTTACATAATTGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: ARAIKQECSDLTVPL*KFSNSVWNVYIIVE Trigger: TTCAACAATTATGTAAACATTCCAAACACTATTTGAAAACTTTCACAGTGGAACTGTCAAGTCGGAGCATTCTTGTTTAATTGCGCGGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658241.1 |
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| CDS GCA 72 bp | GTGGGCCGCAGTTACCCTGGATCCGGCCGGTTTCGCTaGTCCGCGGCCAGCCCCAGCCTCCCGGGAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: VGRSYPGSGRFR*SAASPSLPGAG Trigger: TCCTGCTCCCGGGAGGCTGGGGCTGGCCGCGGAGCAGCGAAACCGGCCGGATCCAGGGTAACTGCGGCCCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000634732.1 ENST00000658982.1 ENST00000660113.1 |
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| CDS CCA 72 bp | GGAGAAGGCGGCTGCGGGGGCTGGCAGCGGTCCTTCTaGGACGCGTCTCACCTAGCTCGCAGCAAATATGCC | + |
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Preference number: 6 (lower is better) Translates to: GEGGCGGWQRSF*DASHLARSKYA Trigger: GGCATATTTGCTGCGAGCTAGGTGAGACGCGTCCCAGAAGGACCGCTGCCAGCCCCCGCAGCCGCCTTCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000634732.1 ENST00000658982.1 ENST00000660113.1 |
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| CDS CCA 72 bp | TTTGTCCGCAGCAGCGGGGGCCGGCTGAAAACAAAGTaGGCCGCAGTTACCCTGGATCCGGCCGGTTTCGCT | + |
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Preference number: 6 (lower is better) Translates to: FVRSSGGRLKTK*AAVTLDPAGFA Trigger: AGCGAAACCGGCCGGATCCAGGGTAACTGCGGCCCACTTTGTTTTCAGCCGGCCCCCGCTGCTGCGGACAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000634732.1 ENST00000658982.1 ENST00000660113.1 |
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| CDS GCA 72 bp | CCGCAGCAGCGGGGGCCGGCTAGCTCGCAGCAAATATaGCATCCATATGCCCAGGATCACAACCGAATCAGC | + |
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Preference number: 6 (lower is better) Translates to: PQQRGPASSQQI*HPYAQDHNRIS Trigger: GCTGATTCGGTTGTGATCCTGGGCATATGGATGGCATATTTGCTGCGAGCTAGCCGGCCCCCGCTGCTGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000452971.2 ENST00000658664.1 |
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| CDS TCA 72 bp | TGGGGACCCTGGAAAGCCGATGGTGTAGTTCCAGTCTaGCTCCGAAGGCCTGAGGACCAGGACAGCCAATGG | + |
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Preference number: 6 (lower is better) Translates to: WGPWKADGVVPV*LRRPEDQDSQW Trigger: CCATTGGCTGTCCTGGTCCTCAGGCCTTCGGAGTCAGACTGGAACTACACCATCGGCTTTCCAGGGTCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000634298.1 ENST00000634464.2 ENST00000658281.1 ENST00000658751.1 ENST00000665359.1 |
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| CDS GCA 72 bp | CTGGAGGCCAAGGGAACAAGGACACACACGGAAAGATaGCGTGGGCCGGAGAGTAAAGCTCACTTGTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: LEAKGTRTHTER*RGPESKAHLSR Trigger: GCGAGACAAGTGAGCTTTACTCTCCGGCCCACGGCATCTTTCCGTGTGTGTCCTTGTTCCCTTGGCCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658241.1 |
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| CDS TCA 72 bp | AGCCGATGGTGTAGTTCCAGTCTGACTCCGAAGGCCTaGGGACCAGGACAGCCAATGGTAAGTTCCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SRWCSSSLTPKA*GPGQPMVSSSL Trigger: CAGGCTGGAACTTACCATTGGCTGTCCTGGTCCTCAGGCCTTCGGAGTCAGACTGGAACTACACCATCGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658281.1 |
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| CDS CCA 72 bp | GGGTTGCTCCAGGAAGGGTACAGGCGGCAAAAGCCGTaGCCATCCGCGGAAAGAATTAAAGGAGCGAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: GLLQEGYRRQKP*PSAERIKGARK Trigger: CTTTCTCGCTCCTTTAATTCTTTCCGCGGATGGCCACGGCTTTTGCCGCCTGTACCCTTCCTGGAGCAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS TCA 72 bp | TTAGAGTCCGGAGTTGGCCTAACAAGCTCCTGTTCATaGATGAAAGATTTGTCCGCAGCAGCGGGGGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: LESGVGLTSSCS*MKDLSAAAGAG Trigger: GCCGGCCCCCGCTGCTGCGGACAAATCTTTCATTCATGAACAGGAGCTTGTTAGGCCAACTCCGGACTCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000452971.2 ENST00000634732.1 ENST00000658664.1 ENST00000658982.1 ENST00000660113.1 |
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| CDS TCA 72 bp | AGCCGATGGTGTAGTTCCAGTCTGACTCCGAAGGCCTaGGGACCAGGACAGCCAATGGTAAGTTCCAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SRWCSSSLTPKA*GPGQPMVSSSS Trigger: ACTGCTGGAACTTACCATTGGCTGTCCTGGTCCTCAGGCCTTCGGAGTCAGACTGGAACTACACCATCGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000634464.2 ENST00000658751.1 |
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| CDS TCA 72 bp | AGCCGATGGTGTAGTTCCAGTCTGACTCCGAAGGCCTaGGGACCAGGACAGCCAATGGTAAGTTCCAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: SRWCSSSLTPKA*GPGQPMVSSSL Trigger: AAGGCTGGAACTTACCATTGGCTGTCCTGGTCCTCAGGCCTTCGGAGTCAGACTGGAACTACACCATCGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000634298.1 ENST00000665359.1 |
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| CDS TCA 72 bp | GTTGAAAGACAGGGCTGGCTAGTGGCGAAACTGCAGTaGGGAATCTTCAGCCTTAGAGATGCCCCCGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: VERQGWLVAKLQ*GIFSLRDAPVP Trigger: AGGGACGGGGGCATCTCTAAGGCTGAAGATTCCTCACTGCAGTTTCGCCACTAGCCAGCCCTGTCTTTCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654266.1 |
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| CDS CAA 72 bp | GTGTCCCTGCCCTTGGCTGTGGTCTGTCAAGCAGGTTaGGGATCAGGGGGTCTTTTGCAGCTACTTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: VSLPLAVVCQAG*GSGGLLQLLSS Trigger: ACTGGAAAGTAGCTGCAAAAGACCCCCTGATCCCAAACCTGCTTGACAGACCACAGCCAAGGGCAGGGACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS GCA 72 bp | CTTCTGGGACGCGTCTCACCTAGCTCGCAGCAAATATaGCATCCATATGCCCAGGATCACAACCGAATCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLGRVSPSSQQI*HPYAQDHNRIS Trigger: GCTGATTCGGTTGTGATCCTGGGCATATGGATGGCATATTTGCTGCGAGCTAGGTGAGACGCGTCCCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634732.1 ENST00000658982.1 ENST00000660113.1 |
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| CDS CCA 72 bp | TGTTCCTCGTTTACAGTTGTTGAGTGTCCCTGCCCTTaGCTGTGGTCTGTCAAGCAGGTTTGGGATCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: CSSFTVVECPCP*LWSVKQVWDQG Trigger: CCCCTGATCCCAAACCTGCTTGACAGACCACAGCCAAGGGCAGGGACACTCAACAACTGTAAACGAGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS CCA 72 bp | TTCTTCTCTACTGGGCTCCCTCAGTATATCATCCCCTaGGCTTCATCCTACCCCAGGCCTTTCCAAACGACC | + |
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Preference number: 6 (lower is better) Translates to: FFSTGLPQYIIP*ASSYPRPFQTT Trigger: GGTCGTTTGGAAAGGCCTGGGGTAGGATGAAGCCCAGGGGATGATATACTGAGGGAGCCCAGTAGAGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654266.1 |
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| CDS CCA 72 bp | GAAAGAAGGCGCCTCCCTGTTTCCAGGGTGTTCTTCTaGAGGCCAAGGGAACAAGGACACACACGGAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: ERRRLPVSRVFF*RPREQGHTRKD Trigger: ATCTTTCCGTGTGTGTCCTTGTTCCCTTGGCCTCCAGAAGAACACCCTGGAAACAGGGAGGCGCCTTCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658241.1 |
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| CDS TCA 72 bp | AAGGAGCGAGAAAGCCCGAGAGGCTGCGATCAGGGTTaGATCAGAGATTCAGGCAGTCACTGCCAAAATGCA | + |
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Preference number: 6 (lower is better) Translates to: KERESPRGCDQG*IRDSGSHCQNA Trigger: TGCATTTTGGCAGTGACTGCCTGAATCTCTGATTCAACCCTGATCGCAGCCTCTCGGGCTTTCTCGCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS GCA 72 bp | TTCTTTCAGCAATCAGGCCGTGGAGGGCTCTCAGGCTaGACTTGCCGCCCTTTGAACAAGACAGGTTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: FFQQSGRGGLSG*TCRPLNKTGFL Trigger: TAGAAAACCTGTCTTGTTCAAAGGGCGGCAAGTGCAGCCTGAGAGCCCTCCACGGCCTGATTGCTGAAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000658241.1 ENST00000658281.1 ENST00000658751.1 ENST00000658851.1 ENST00000671197.1 |
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| CDS CCA 72 bp | TCGTTTACAGTTGTTGAGTGTCCCTGCCCTTGGCTGTaGTCTGTCAAGCAGGTTTGGGATCAGGGGGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SFTVVECPCPWL*SVKQVWDQGVF Trigger: AAAGACCCCCTGATCCCAAACCTGCTTGACAGACCACAGCCAAGGGCAGGGACACTCAACAACTGTAAACGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS CAA 72 bp | AAAGGAGCGAGAAAGCCCGAGAGGCTGCGATCAGGGTaGAATCAGAGATTCAGGCAGTCACTGCCAAAATGC | + |
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Preference number: 6 (lower is better) Translates to: KGARKPERLRSG*NQRFRQSLPKC Trigger: GCATTTTGGCAGTGACTGCCTGAATCTCTGATTCAACCCTGATCGCAGCCTCTCGGGCTTTCTCGCTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS CAA 90 bp | CCCTTGGCTGTGGTCTGTCAAGCAGGTTTGGGATCAGGGGGTCTTTaGCAGCTACTTTCCAGTGGAGGGTTCAATGAGTGTTTTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PLAVVCQAGLGSGGL*QLLSSGGFNECFSL Trigger: CAGAGAAAAACACTCATTGAACCCTCCACTGGAAAGTAGCTGCAAAAGACCCCCTGATCCCAAACCTGCTTGACAGACCACAGCCAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS CCA 72 bp | TCCGCTGAAAGTCCTTGGGCAACTCATTCCACCCACTaGCGCTATCGTGTCTTCATCCCTTTGAACAAGACA | + |
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Preference number: 6 (lower is better) Translates to: SAESPWATHSTH*RYRVFIPLNKT Trigger: TGTCTTGTTCAAAGGGATGAAGACACGATAGCGCCAGTGGGTGGAATGAGTTGCCCAAGGACTTTCAGCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659619.1 |
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| CDS TCA 72 bp | TCTTGTTGTGAAATCCTGCTCAAACTTGAAAGCCACTaGCCTTTCCCTGGAGCTCCCTTTAGCGTTCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: SCCEILLKLESH*PFPGAPFSVPH Trigger: GTGCGGAACGCTAAAGGGAGCTCCAGGGAAAGGTCAGTGGCTTTCAAGTTTGAGCAGGATTTCACAACAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654266.1 |
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| CDS GCA 72 bp | TGGTCTGTCAAGCAGGTTTGGGATCAGGGGGTCTTTTaGAGCTACTTTCCAGTGGAGGGTTCAATGAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: WSVKQVWDQGVF*SYFPVEGSMSV Trigger: AACACTCATTGAACCCTCCACTGGAAAGTAGCTGCAAAAGACCCCCTGATCCCAAACCTGCTTGACAGACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS GCA 72 bp | GTGAAATGTTCCTCGTTTACAGTTGTTGAGTGTCCCTaGCCTTGGCTGTGGTCTGTCAAGCAGGTTTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: VKCSSFTVVECP*PWLWSVKQVWD Trigger: ATCCCAAACCTGCTTGACAGACCACAGCCAAGGGCAGGGACACTCAACAACTGTAAACGAGGAACATTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS GCA 72 bp | ATTGGTTTTTGCAATTATGAGGCTGATTCCAAGGTCTaGAGTTGGCAAGCTGGGGACCCTGGAAAGCCGATG | + |
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Preference number: 6 (lower is better) Translates to: IGFCNYEADSKV*SWQAGDPGKPM Trigger: CATCGGCTTTCCAGGGTCCCCAGCTTGCCAACTGCAGACCTTGGAATCAGCCTCATAATTGCAAAAACCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000634298.1 ENST00000634464.2 ENST00000658281.1 ENST00000658751.1 ENST00000665359.1 |
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| CDS CCA 72 bp | CTCACTGAAAGTCCTTGGGCAACTCATTCCACCCACTaGCGCTATCGTGTCTTCATCCCTGTTTACACTCTT | + |
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Preference number: 6 (lower is better) Translates to: LTESPWATHSTH*RYRVFIPVYTL Trigger: AAGAGTGTAAACAGGGATGAAGACACGATAGCGCCAGTGGGTGGAATGAGTTGCCCAAGGACTTTCAGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658851.1 ENST00000671197.1 |
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| CDS CCA 72 bp | CTCACTGAAAGTCCTTGGGCAACTCATTCCACCCACTaGCGCTATCGTGTCTTCATCCCTTTGAACAAGACA | + |
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Preference number: 6 (lower is better) Translates to: LTESPWATHSTH*RYRVFIPLNKT Trigger: TGTCTTGTTCAAAGGGATGAAGACACGATAGCGCCAGTGGGTGGAATGAGTTGCCCAAGGACTTTCAGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658172.1 |
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| CDS CAA 90 bp | GAAAGAATTAAAGGAGCGAGAAAGCCCGAGAGGCTGCGATCAGGGTaGAATCAGAGATTCAGGCAGTCACTGCCAAAATGCATGGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: ERIKGARKPERLRSG*NQRFRQSLPKCMEV Trigger: GACTTCCATGCATTTTGGCAGTGACTGCCTGAATCTCTGATTCAACCCTGATCGCAGCCTCTCGGGCTTTCTCGCTCCTTTAATTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS CAA 90 bp | TTCTTCCATATCTTTCTGGGTCTTGTTGTGAAATCCTGCTCAAACTaGAAAGCCACTGACCTTTCCCTGGAGCTCCCTTTAGCGTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: FFHIFLGLVVKSCSN*KATDLSLELPLAFR Trigger: GCGGAACGCTAAAGGGAGCTCCAGGGAAAGGTCAGTGGCTTTCAAGTTTGAGCAGGATTTCACAACAAGACCCAGAAAGATATGGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654266.1 |
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| CDS TCA 72 bp | ATCTTTGCAGCGTCCCTGATAGTGGTAATGCCACCATaGGCTTTGTCCTCAAACCTCCTCCTCCATCATTTA | + |
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Preference number: 6 (lower is better) Translates to: IFAASLIVVMPP*ALSSNLLLHHL Trigger: TAAATGATGGAGGAGGAGGTTTGAGGACAAAGCTCATGGTGGCATTACCACTATCAGGGACGCTGCAAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS GCA 72 bp | ATTCAGGCAGTCACTGCCAAAATGCATGGAAGTCATTaGCAAGACATAAAAGGTCAGAGGATACCAGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: IQAVTAKMHGSH*QDIKGQRIPAV Trigger: CACGGCTGGTATCCTCTGACCTTTTATGTCTTGGCAATGACTTCCATGCATTTTGGCAGTGACTGCCTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS CCA 72 bp | AGCGGTTGTGTACACATCCCAAACTGCCAAGAAACCTaGGTGGCCATGAGCATTGAGCTTAATCAAAGATCT | + |
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Preference number: 6 (lower is better) Translates to: SGCVHIPNCQET*VAMSIELNQRS Trigger: AGATCTTTGATTAAGCTCAATGCTCATGGCCACCCAGGTTTCTTGGCAGTTTGGGATGTGTACACAACCGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658851.1 |
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| CDS CAA 72 bp | GATTCAGGCAGTCACTGCCAAAATGCATGGAAGTCATaGCCAAGACATAAAAGGTCAGAGGATACCAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: DSGSHCQNAWKS*PRHKRSEDTSR Trigger: ACGGCTGGTATCCTCTGACCTTTTATGTCTTGGCAATGACTTCCATGCATTTTGGCAGTGACTGCCTGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000452971.2 ENST00000634298.1 ENST00000634464.2 ENST00000634732.1 ENST00000654266.1 ENST00000658172.1 ENST00000658241.1 ENST00000658281.1 ENST00000658664.1 ENST00000658751.1 ENST00000658851.1 ENST00000658982.1 ENST00000659619.1 ENST00000660113.1 ENST00000665359.1 ENST00000671197.1 |
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| CDS TCA 72 bp | GGGTCTTTTGCAGCTACTTTCCAGTGGAGGGTTCAATaGGTGTTTTTCTCTGACGGATGTTGCAGGTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: GSFAATFQWRVQ*VFFSDGCCRFV Trigger: AACAAACCTGCAACATCCGTCAGAGAAAAACACTCATTGAACCCTCCACTGGAAAGTAGCTGCAAAAGACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000658664.1 ENST00000660113.1 |
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| CDS GCA 72 bp | AGTGTCATAATTCCCATTGTGGCCCTAAATATGGGATaGAGAAGGACAGCGGTTGTGTACACATCCCAAACT | + |
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Preference number: 6 (lower is better) Translates to: SVIIPIVALNMG*RRTAVVYTSQT Trigger: AGTTTGGGATGTGTACACAACCGCTGTCCTTCTGCATCCCATATTTAGGGCCACAATGGGAATTATGACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658851.1 |
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| CDS TCA 72 bp | ATTGTGCCCGCGCAATTAAACAAGAATGCTCCGACTTaGCAGTTCCACTGTGAAAGTTTTCAAATAGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: IVPAQLNKNAPT*QFHCESFQIVF Trigger: AAACACTATTTGAAAACTTTCACAGTGGAACTGTCAAGTCGGAGCATTCTTGTTTAATTGCGCGGGCACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658241.1 |
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| CDS CAA 72 bp | TGCCAACAATTTTGCCTGGTATCTCAGAATGGTCATTaGGTGCTTTGGAGAAAACCCTTAAATGACACAGAA | + |
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Preference number: 6 (lower is better) Translates to: CQQFCLVSQNGH*VLWRKPLNDTE Trigger: TTCTGTGTCATTTAAGGGTTTTCTCCAAAGCACCAAATGACCATTCTGAGATACCAGGCAAAATTGTTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658241.1 |
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| CDS CAA 72 bp | CATTTTACTTTTAGTGTCTCCATGAGTGGAATAACTTaGAAACTAGAGCTCAACACGAGCATTACCAATGCC | + |
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Preference number: 6 (lower is better) Translates to: HFTFSVSMSGIT*KLELNTSITNA Trigger: GGCATTGGTAATGCTCGTGTTGAGCTCTAGTTTCAAAGTTATTCCACTCATGGAGACACTAAAAGTAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654266.1 |
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| CDS CAA 72 bp | TTCAATGAGTGTTTTTCTCTGACGGATGTTGCAGGTTaGTTCCAGTTCACTTTAAATACCTCTCTGTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: FNECFSLTDVAG*FQFTLNTSLFS Trigger: TGAGAACAGAGAGGTATTTAAAGTGAACTGGAACAAACCTGCAACATCCGTCAGAGAAAAACACTCATTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000658664.1 ENST00000660113.1 |
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| CDS CAA 90 bp | TTGAACTTCCATTTTACTTTTAGTGTCTCCATGAGTGGAATAACTTaGAAACTAGAGCTCAACACGAGCATTACCAATGCCGTTGAACTA | + |
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Preference number: 6 (lower is better) Translates to: LNFHFTFSVSMSGIT*KLELNTSITNAVEL Trigger: TAGTTCAACGGCATTGGTAATGCTCGTGTTGAGCTCTAGTTTCAAAGTTATTCCACTCATGGAGACACTAAAAGTAAAATGGAAGTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654266.1 |
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