Pregenerated sensors for LINC01684 (Homo sapiens)
Ensembl gene IDs: ENSG00000237484Ensembl transcript IDs: ENST00000415182.1, ENST00000423581.2, ENST00000453784.2, ENST00000653166.1, ENST00000653855.1, ENST00000654158.1, ENST00000654771.1, ENST00000655039.1, ENST00000655241.1, ENST00000655294.1, ENST00000655505.1, ENST00000655533.1, ENST00000656088.1, ENST00000656122.1, ENST00000656780.1, ENST00000656842.1, ENST00000657079.1, ENST00000657522.1, ENST00000657774.1, ENST00000659824.1, ENST00000662917.1, ENST00000663985.1, ENST00000666492.1, ENST00000668315.1, ENST00000668910.1, ENST00000670142.1, ENST00000671574.1
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GTGCTTTGTTCACCTTTGAATCCTCGTGCCTCCGAAGATGCAACCTaGGACCCCTCATCTTCTGCCTTCACTGGGCACTTTTGTCTTGAC | + |
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Preference number: 5 (lower is better) Translates to: VLCSPLNPRASEDAT*DPSSSAFTGHFCLD Trigger: GTCAAGACAAAAGTGCCCAGTGAAGGCAGAAGATGAGGGGTCTCAGGTTGCATCTTCGGAGGCACGAGGATTCAAAGGTGAACAAAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000654158.1 ENST00000655505.1 ENST00000655533.1 ENST00000656842.1 ENST00000657522.1 ENST00000659824.1 ENST00000663985.1 ENST00000668315.1 |
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| CDS GCA 90 bp | CAAGAGCCATGCCTAAAGCACAGTAGGGCTGATGTCAGATGCTCTTaGAATCCACTGAGTTCGGTGTTCCCTTTAAACCCTAGTACTTCA | + |
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Preference number: 5 (lower is better) Translates to: QEPCLKHSRADVRCS*NPLSSVFPLNPSTS Trigger: TGAAGTACTAGGGTTTAAAGGGAACACCGAACTCAGTGGATTGCAAGAGCATCTGACATCAGCCCTACTGTGCTTTAGGCATGGCTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
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| CDS TCA 90 bp | GCCTGTTGCTGTTTCTGTAGCTTGAACCACATATATCCTCCTGTTTaGCCACTTGATGTTCTTTCCCGAGCAATTCCTGAAGTGTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: ACCCFCSLNHIYPPV*PLDVLSRAIPEVSP Trigger: TGGAGACACTTCAGGAATTGCTCGGGAAAGAACATCAAGTGGTCAAACAGGAGGATATATGTGGTTCAAGCTACAGAAACAGCAACAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656088.1 |
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| CDS GCA 90 bp | CAAGCAACTTCAGTTCCCAATTGTGTCAGCTTATGTCTTCTGGGATaGACACTCCAGGATAAAATTAGAAGAGCGGTGATTTGGAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: QATSVPNCVSLCLLG*TLQDKIRRAVIWRE Trigger: CTCCCTCCAAATCACCGCTCTTCTAATTTTATCCTGGAGTGTGCATCCCAGAAGACATAAGCTGACACAATTGGGAACTGAAGTTGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 23 transcripts: ENST00000423581.2 ENST00000453784.2 ENST00000653166.1 ENST00000653855.1 ENST00000654158.1 ENST00000654771.1 ENST00000655241.1 ENST00000655294.1 ENST00000655505.1 ENST00000655533.1 ENST00000656088.1 ENST00000656122.1 ENST00000656780.1 ENST00000656842.1 ENST00000657079.1 ENST00000657774.1 ENST00000662917.1 ENST00000663985.1 ENST00000666492.1 ENST00000668315.1 ENST00000668910.1 ENST00000670142.1 ENST00000671574.1 |
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| CDS GCA 90 bp | AAACTTCACACTATGTACTGTGGTCTGTCATATTTCCAAGAGCCATaGCTAAAGCACAGTAGGGCTGATGTCAGATGCTCTTGCAATCCA | + |
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Preference number: 5 (lower is better) Translates to: KLHTMYCGLSYFQEP*LKHSRADVRCSCNP Trigger: TGGATTGCAAGAGCATCTGACATCAGCCCTACTGTGCTTTAGGCATGGCTCTTGGAAATATGACAGACCACAGTACATAGTGTGAAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
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| CDS TCA 90 bp | CCCCATTCATTGCCCTTGCCCTTTCAAATGTCTAAATCATCTCACTaGGAAGAGCTTTCCCTTATATCAGTCTGTTTTCCTAGGTCACCA | + |
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Preference number: 5 (lower is better) Translates to: PHSLPLPFQMSKSSH*EELSLISVCFPRSP Trigger: TGGTGACCTAGGAAAACAGACTGATATAAGGGAAAGCTCTTCTCAGTGAGATGATTTAGACATTTGAAAGGGCAAGGGCAATGAATGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423581.2 |
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| CDS TCA 90 bp | TCTATTCTTATGTTGGCTGCTCAGCCTGTTGCTGTTTCTGTAGCTTaGACCACATATATCCTCCTGTTTGACCACTTGATGTTCTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: SILMLAAQPVAVSVA*TTYILLFDHLMFFP Trigger: GGGAAAGAACATCAAGTGGTCAAACAGGAGGATATATGTGGTTCAAGCTACAGAAACAGCAACAGGCTGAGCAGCCAACATAAGAATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656088.1 |
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| CDS GCA 90 bp | TCTAAAGGCCGTGGAAATGAACTTAACCTTATCTTCTGGTTAAGTTaGCAAGAGGGAATGTGGGAAAAGATCTCATGGCGGGAAGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: SKGRGNELNLIFWLS*QEGMWEKISWREVF Trigger: GAAAACTTCCCGCCATGAGATCTTTTCCCACATTCCCTCTTGGCAACTTAACCAGAAGATAAGGTTAAGTTCATTTCCACGGCCTTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
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| CDS CCA 90 bp | GTGCAGAACATGCAGATTTGTTACATAGGTGTACATGTGCCATGGTaGTTTTCTGCACCCATCAACCCACCATCTACATTACGTATTTCA | + |
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Preference number: 5 (lower is better) Translates to: VQNMQICYIGVHVPW*FSAPINPPSTLRIS Trigger: TGAAATACGTAATGTAGATGGTGGGTTGATGGGTGCAGAAAACCACCATGGCACATGTACACCTATGTAACAAATCTGCATGTTCTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453784.2 |
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| CDS CCA 90 bp | CATGTGCAGAACATGCAGATTTGTTACATAGGTGTACATGTGCCATaGTGGTTTTCTGCACCCATCAACCCACCATCTACATTACGTATT | + |
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Preference number: 5 (lower is better) Translates to: HVQNMQICYIGVHVP*WFSAPINPPSTLRI Trigger: AATACGTAATGTAGATGGTGGGTTGATGGGTGCAGAAAACCACCATGGCACATGTACACCTATGTAACAAATCTGCATGTTCTGCACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453784.2 |
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| CDS TCA 90 bp | TCCTTTTGGTACATATTAACCAGGTCCAGTGACTCCAACCATGAATaGTGTCTTTTCTCATGTATAAGGTCCAGAGGTTCTAAAGGCCGT | + |
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Preference number: 5 (lower is better) Translates to: SFWYILTRSSDSNHE*CLFSCIRSRGSKGR Trigger: ACGGCCTTTAGAACCTCTGGACCTTATACATGAGAAAAGACATCATTCATGGTTGGAGTCACTGGACCTGGTTAATATGTACCAAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
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| CDS GCA 90 bp | TATGAGAATTTAAACAGGTGGGGTATAATTTACACTTGGTTCCTCTaGCAACACCCAATGCCCAAATTAAAAACTGGCTGTGGGATCTCC | + |
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Preference number: 5 (lower is better) Translates to: YENLNRWGIIYTWFL*QHPMPKLKTGCGIS Trigger: GGAGATCCCACAGCCAGTTTTTAATTTGGGCATTGGGTGTTGGCAGAGGAACCAAGTGTAAATTATACCCCACCTGTTTAAATTCTCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654158.1 |
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| CDS CCA 90 bp | TTGGTTCCTCTGCCAACACCCAATGCCCAAATTAAAAACTGGCTGTaGGATCTCCTCCAAAACGATTTCTACCTGTTAATATCTGATACT | + |
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Preference number: 5 (lower is better) Translates to: LVPLPTPNAQIKNWL*DLLQNDFYLLISDT Trigger: AGTATCAGATATTAACAGGTAGAAATCGTTTTGGAGGAGATCCCACAGCCAGTTTTTAATTTGGGCATTGGGTGTTGGCAGAGGAACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654158.1 |
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| CDS CCA 90 bp | TTACACTTGGTTCCTCTGCCAACACCCAATGCCCAAATTAAAAACTaGCTGTGGGATCTCCTCCAAAACGATTTCTACCTGTTAATATCT | + |
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Preference number: 5 (lower is better) Translates to: LHLVPLPTPNAQIKN*LWDLLQNDFYLLIS Trigger: AGATATTAACAGGTAGAAATCGTTTTGGAGGAGATCCCACAGCCAGTTTTTAATTTGGGCATTGGGTGTTGGCAGAGGAACCAAGTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654158.1 |
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| CDS CCA 90 bp | CAGCCTGGGAAACAGGAGAATTTGTCTATTAACTGTAGTTTTGGATaGAACTCTGTCCAGCAACTGAAGGCTACTTTAATAAGCCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: QPGKQENLSINCSFG*NSVQQLKATLISLS Trigger: AGAGAGGCTTATTAAAGTAGCCTTCAGTTGCTGGACAGAGTTCCATCCAAAACTACAGTTAATAGACAAATTCTCCTGTTTCCCAGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662917.1 ENST00000671574.1 |
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| CDS GCA 90 bp | TGTATGTCTACCATTTGGGTATGTGTCCTAGAGTTCACTGCAATCTaGCATCATGTATTTGATTTTTGTGTGGCCACACAAGTGACTGAA | + |
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Preference number: 5 (lower is better) Translates to: CMSTIWVCVLEFTAI*HHVFDFCVATQVTE Trigger: TTCAGTCACTTGTGTGGCCACACAAAAATCAAATACATGATGGCAGATTGCAGTGAACTCTAGGACACATACCCAAATGGTAGACATACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000415182.1 |
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| CDS CCA 90 bp | CCACCAATCTATGAGAATTTAAACAGGTGGGGTATAATTTACACTTaGTTCCTCTGCCAACACCCAATGCCCAAATTAAAAACTGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: PPIYENLNRWGIIYT*FLCQHPMPKLKTGC Trigger: ACAGCCAGTTTTTAATTTGGGCATTGGGTGTTGGCAGAGGAACCAAGTGTAAATTATACCCCACCTGTTTAAATTCTCATAGATTGGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654158.1 |
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| CDS CCA 90 bp | TGTGTACAGCTGGATTCAGGTACAACTATTAACTGTAGTTTTGGATaGAACTCTGTCCAGCAACTGAAGGCTACTTTAATAAGCCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: CVQLDSGTTINCSFG*NSVQQLKATLISLS Trigger: AGAGAGGCTTATTAAAGTAGCCTTCAGTTGCTGGACAGAGTTCCATCCAAAACTACAGTTAATAGTTGTACCTGAATCCAGCTGTACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656088.1 |
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| CDS TCA 90 bp | AAGAGCTTTCCCTTATATCAGTCTGTTTTCCTAGGTCACCACTGGTaGCATATTTGTAAGTTGGGTCACCACCTAGTTTCAAAAACTATC | + |
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Preference number: 5 (lower is better) Translates to: KSFPLYQSVFLGHHW*HICKLGHHLVSKTI Trigger: GATAGTTTTTGAAACTAGGTGGTGACCCAACTTACAAATATGTCACCAGTGGTGACCTAGGAAAACAGACTGATATAAGGGAAAGCTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000423581.2 |
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| CDS CCA 90 bp | CCAGTAATATCACACTTGTCAGAACAGCTTTGTATGTCTACCATTTaGGTATGTGTCCTAGAGTTCACTGCAATCTGCCATCATGTATTT | + |
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Preference number: 5 (lower is better) Translates to: PVISHLSEQLCMSTI*VCVLEFTAICHHVF Trigger: AAATACATGATGGCAGATTGCAGTGAACTCTAGGACACATACCCAAATGGTAGACATACAAAGCTGTTCTGACAAGTGTGATATTACTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415182.1 |
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| CDS CCA 90 bp | GGGCTCTCCAGAAATCTAAGTATGCAGATGTTGGATAACAGCTACTaGACAGAGGTGATCCTACAATTATATTATTTCTTCATCACGTTG | + |
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Preference number: 5 (lower is better) Translates to: GLSRNLSMQMLDNSY*TEVILQLYYFFITL Trigger: CAACGTGATGAAGAAATAATATAATTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654158.1 ENST00000655505.1 ENST00000655533.1 ENST00000656842.1 ENST00000663985.1 |
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| CDS CCA 90 bp | TACAGGATAATTATTATCCCACCAATCTATGAGAATTTAAACAGGTaGGGTATAATTTACACTTGGTTCCTCTGCCAACACCCAATGCCC | + |
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Preference number: 5 (lower is better) Translates to: YRIIIIPPIYENLNR*GIIYTWFLCQHPMP Trigger: GGGCATTGGGTGTTGGCAGAGGAACCAAGTGTAAATTATACCCCACCTGTTTAAATTCTCATAGATTGGTGGGATAATAATTATCCTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654158.1 |
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| CDS TCA 90 bp | TCATCCATGATCTTAGATTCCTACATAATAGAGTTCCTCAGCTGTTaGGTTGCTGATAACTGGCATGGAAATTATGTTGGTCCTTATCTC | + |
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Preference number: 5 (lower is better) Translates to: SSMILDSYIIEFLSC*VADNWHGNYVGPYL Trigger: GAGATAAGGACCAACATAATTTCCATGCCAGTTATCAGCAACTCAACAGCTGAGGAACTCTATTATGTAGGAATCTAAGATCATGGATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
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| CDS TCA 90 bp | GATATTACTTTACATTGTATATGGAACTTTGTGGATGTGATGAGTTaGGGATCTTTAGATGGAGAGGTTACCCTGCATGTGATCACAAGG | + |
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Preference number: 5 (lower is better) Translates to: DITLHCIWNFVDVMS*GSLDGEVTLHVITR Trigger: CCTTGTGATCACATGCAGGGTAACCTCTCCATCTAAAGATCCTCAACTCATCACATCCACAAAGTTCCATATACAATGTAAAGTAATATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654158.1 |
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| CDS GCA 90 bp | AAAGTGAGTGGGAAATTTTCCCATATTTTCTATTCTTATGTTGGCTaGTCAGCCTGTTGCTGTTTCTGTAGCTTGAACCACATATATCCT | + |
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Preference number: 5 (lower is better) Translates to: KVSGKFSHIFYSYVG*SACCCFCSLNHIYP Trigger: AGGATATATGTGGTTCAAGCTACAGAAACAGCAACAGGCTGAGCAGCCAACATAAGAATAGAAAATATGGGAAAATTTCCCACTCACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656088.1 |
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| CDS CCA 90 bp | GTCCTCTCCAGAAATCTAAGTATGCAGATGTTGGATAACAGCTACTaGACAGAGGTGATCCTACAATTATATTATTTCTTCATCACGTTG | + |
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Preference number: 5 (lower is better) Translates to: VLSRNLSMQMLDNSY*TEVILQLYYFFITL Trigger: CAACGTGATGAAGAAATAATATAATTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655294.1 ENST00000657774.1 |
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| CDS TCA 90 bp | GCACAGTGGTTATTGTGCAGCCGATCAGAACTCTCCATTTTAGTCTaGTGTTGTTACAAACATGAACAAATATGGTCACAAATACATTAC | + |
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Preference number: 5 (lower is better) Translates to: AQWLLCSRSELSILV*CCYKHEQIWSQIHY Trigger: GTAATGTATTTGTGACCATATTTGTTCATGTTTGTAACAACATCAGACTAAAATGGAGAGTTCTGATCGGCTGCACAATAACCACTGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655533.1 ENST00000668315.1 |
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| CDS GCA 90 bp | TGGCATGGAAATTATGTTGGTCCTTATCTCTCTGTACTGATTACATaGTACCACCTTTCCTTTGCTCTTCTAGAATTGTATATCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: WHGNYVGPYLSVLIT*YHLSFALLELYIIF Trigger: GAAGATGATATACAATTCTAGAAGAGCAAAGGAAAGGTGGTAGCATGTAATCAGTACAGAGAGATAAGGACCAACATAATTTCCATGCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
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| CDS CCA 90 bp | TGTTTGCAGCTTGAAAATCACTTGCTGTACTTTCATGGTCATTCATaGATATCACATCAAATGATGTACTGTGTGCTTTGTTCACCTTTG | + |
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Preference number: 5 (lower is better) Translates to: CLQLENHLLYFHGHS*ISHQMMYCVLCSPL Trigger: CAAAGGTGAACAAAGCACACAGTACATCATTTGATGTGATATCCATGAATGACCATGAAAGTACAGCAAGTGATTTTCAAGCTGCAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655505.1 ENST00000656842.1 |
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| CDS CCA 90 bp | AACCTCTCCAGAAATCTAAGTATGCAGATGTTGGATAACAGCTACTaGACAGAGGTGATCCTACAATTATATTATTTCTTCATCACGTTG | + |
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Preference number: 5 (lower is better) Translates to: NLSRNLSMQMLDNSY*TEVILQLYYFFITL Trigger: CAACGTGATGAAGAAATAATATAATTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653166.1 |
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| CDS CCA 90 bp | TGTCTCTCCAGAAATCTAAGTATGCAGATGTTGGATAACAGCTACTaGACAGAGGTGATCCTACAATTATATTATTTCTTCATCACGTTG | + |
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Preference number: 5 (lower is better) Translates to: CLSRNLSMQMLDNSY*TEVILQLYYFFITL Trigger: CAACGTGATGAAGAAATAATATAATTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668910.1 |
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| CDS CCA 90 bp | CTTCTCTCCAGAAATCTAAGTATGCAGATGTTGGATAACAGCTACTaGACAGAGGTGATCCTACAATTATATTATTTCTTCATCACGTTG | + |
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Preference number: 5 (lower is better) Translates to: LLSRNLSMQMLDNSY*TEVILQLYYFFITL Trigger: CAACGTGATGAAGAAATAATATAATTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668315.1 |
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| CDS CCA 90 bp | CATCTCTCCAGAAATCTAAGTATGCAGATGTTGGATAACAGCTACTaGACAGAGGTGATCCTACAATTATATTATTTCTTCATCACGTTG | + |
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Preference number: 5 (lower is better) Translates to: HLSRNLSMQMLDNSY*TEVILQLYYFFITL Trigger: CAACGTGATGAAGAAATAATATAATTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670142.1 |
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| CDS CCA 90 bp | TACCTCTCCAGAAATCTAAGTATGCAGATGTTGGATAACAGCTACTaGACAGAGGTGATCCTACAATTATATTATTTCTTCATCACGTTG | + |
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Preference number: 5 (lower is better) Translates to: YLSRNLSMQMLDNSY*TEVILQLYYFFITL Trigger: CAACGTGATGAAGAAATAATATAATTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666492.1 |
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| CDS TCA 90 bp | AGTTCTAGATTTTTGAGGAATCACCACACTGTCTTCCACAATGGTTaGACTAATTTACACTCCCACCAACAGTGTAAAACCATTTCTATT | + |
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Preference number: 5 (lower is better) Translates to: SSRFLRNHHTVFHNG*TNLHSHQQCKTISI Trigger: AATAGAAATGGTTTTACACTGTTGGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGTGATTCCTCAAAAATCTAGAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000453784.2 |
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| CDS TCA 90 bp | CAGCCGATCAGAACTCTCCATTTTAGTCTGATGTTGTTACAAACATaGACAAATATGGTCACAAATACATTACTCCAAAGCCTTTATAGC | + |
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Preference number: 5 (lower is better) Translates to: QPIRTLHFSLMLLQT*TNMVTNTLLQSLYS Trigger: GCTATAAAGGCTTTGGAGTAATGTATTTGTGACCATATTTGTTCATGTTTGTAACAACATCAGACTAAAATGGAGAGTTCTGATCGGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655533.1 ENST00000668315.1 |
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| CDS CCA 90 bp | TATCTCTCCAGAAATCTAAGTATGCAGATGTTGGATAACAGCTACTaGACAGAGGTGATCCTACAATTATATTATTTCTTCATCACGTTG | + |
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Preference number: 5 (lower is better) Translates to: YLSRNLSMQMLDNSY*TEVILQLYYFFITL Trigger: CAACGTGATGAAGAAATAATATAATTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000453784.2 ENST00000653855.1 ENST00000654771.1 ENST00000655241.1 ENST00000656088.1 ENST00000656122.1 ENST00000656780.1 ENST00000657079.1 ENST00000662917.1 ENST00000671574.1 |
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| CDS CCA 90 bp | AGCAGAGATACTTCTTCATTTCATCATGTAAGCCATTTTAGAGGCTaGCATCACTATGAGTTAACTATACAATCAAGTATTCAGTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: SRDTSSFHHVSHFRG*HHYELTIQSSIQSS Trigger: ACTGGACTGAATACTTGATTGTATAGTTAACTCATAGTGATGCCAGCCTCTAAAATGGCTTACATGATGAAATGAAGAAGTATCTCTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655533.1 ENST00000668315.1 |
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| CDS GCA 90 bp | TCTTCCATTTGCTTGCTAAAATTTGTTTGCAGCTTGAAAATCACTTaGTGTACTTTCATGGTCATTCATGGATATCTCTCCAGAAATCTA | + |
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Preference number: 5 (lower is better) Translates to: SSICLLKFVCSLKIT*CTFMVIHGYLSRNL Trigger: TAGATTTCTGGAGAGATATCCATGAATGACCATGAAAGTACAGCAAGTGATTTTCAAGCTGCAAACAAATTTTAGCAAGCAAATGGAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000453784.2 ENST00000653855.1 ENST00000655241.1 ENST00000656088.1 ENST00000656122.1 ENST00000656780.1 ENST00000657079.1 ENST00000662917.1 ENST00000671574.1 |
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| CDS CCA 72 bp | GAGGCCGAAGAGGGTGGATGGCTTGAGCTCCCGGGTTaGAGGCCACCCTGGATAACATGGCAAAACACTATC | + |
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Preference number: 6 (lower is better) Translates to: EAEEGGWLELPG*RPPWITWQNTI Trigger: GATAGTGTTTTGCCATGTTATCCAGGGTGGCCTCCAACCCGGGAGCTCAAGCCATCCACCCTCTTCGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000653855.1 ENST00000654771.1 ENST00000655294.1 ENST00000657522.1 ENST00000657774.1 ENST00000662917.1 ENST00000668910.1 ENST00000671574.1 |
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| CDS GCA 72 bp | CAGGAGAATTTGTCTGCTTTGTGGTCAGGGTCTGCATaGGTGGGAGGAGCCTGCTGTTATCCAGATTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: QENLSALWSGSA*VGGACCYPDLP Trigger: TGGCAAATCTGGATAACAGCAGGCTCCTCCCACGCATGCAGACCCTGACCACAAAGCAGACAAATTCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653855.1 ENST00000655294.1 ENST00000657774.1 |
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| CDS GCA 72 bp | GAGCCATGCCTAAAGCACAGTAGGGCTGATGTCAGATaGTCTTGCAATCCACTGAGTTCGGTGTTCCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: EPCLKHSRADVR*SCNPLSSVFPL Trigger: TAAAGGGAACACCGAACTCAGTGGATTGCAAGAGCATCTGACATCAGCCCTACTGTGCTTTAGGCATGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
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| CDS GCA 72 bp | GAAACAGGAGAATTTGTCTGCTTTGTGGTCAGGGTCTaGATGCGTGGGAGGAGCCTGCTGTTATCCAGATTT | + |
|
Preference number: 6 (lower is better) Translates to: ETGEFVCFVVRV*MRGRSLLLSRF Trigger: AAATCTGGATAACAGCAGGCTCCTCCCACGCATGCAGACCCTGACCACAAAGCAGACAAATTCTCCTGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653855.1 ENST00000655294.1 ENST00000657774.1 |
||
| CDS GCA 72 bp | TGCCTAAAGCACAGTAGGGCTGATGTCAGATGCTCTTaGAATCCACTGAGTTCGGTGTTCCCTTTAAACCCT | + |
|
Preference number: 6 (lower is better) Translates to: CLKHSRADVRCS*NPLSSVFPLNP Trigger: AGGGTTTAAAGGGAACACCGAACTCAGTGGATTGCAAGAGCATCTGACATCAGCCCTACTGTGCTTTAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
||
| CDS CAA 90 bp | GCAACAGAGCGAGACTCCATCACATCAAATGATGTACTGTGTGCTTaGTTCACCTTTGAATCCTCGTGCCTCCGAAGATGCAACCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ATERDSITSNDVLCA*FTFESSCLRRCNLR Trigger: TCTCAGGTTGCATCTTCGGAGGCACGAGGATTCAAAGGTGAACAAAGCACACAGTACATCATTTGATGTGATGGAGTCTCGCTCTGTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659824.1 ENST00000663985.1 |
||
| CDS TCA 72 bp | TTTGGGAAGCGAAGTCAGGCAGATTACTTGAGGTCATaGGTTGAAGACCAGTCTGTCCAATATGGTGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: FGKRSQADYLRS*VEDQSVQYGEP Trigger: GGGTTCACCATATTGGACAGACTGGTCTTCAACTCATGACCTCAAGTAATCTGCCTGACTTCGCTTCCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653166.1 |
||
| CDS CCA 72 bp | GTTCCTCTGCCAACACCCAATGCCCAAATTAAAAACTaGCTGTGGGATCTCCTCCAAAACGATTTCTACCTG | + |
|
Preference number: 6 (lower is better) Translates to: VPLPTPNAQIKN*LWDLLQNDFYL Trigger: CAGGTAGAAATCGTTTTGGAGGAGATCCCACAGCCAGTTTTTAATTTGGGCATTGGGTGTTGGCAGAGGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654158.1 |
||
| CDS CAA 72 bp | GCTTCCATCTCCACATCAAATGATGTACTGTGTGCTTaGTTCACCTTTGAATCCTCGTGCCTCCGAAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: ASISTSNDVLCA*FTFESSCLRRC Trigger: GCATCTTCGGAGGCACGAGGATTCAAAGGTGAACAAAGCACACAGTACATCATTTGATGTGGAGATGGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654158.1 |
||
| CDS CAA 72 bp | CGAGACTCCATCACATCAAATGATGTACTGTGTGCTTaGTTCACCTTTGAATCCTCGTGCCTCCGAAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: RDSITSNDVLCA*FTFESSCLRRC Trigger: GCATCTTCGGAGGCACGAGGATTCAAAGGTGAACAAAGCACACAGTACATCATTTGATGTGATGGAGTCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659824.1 ENST00000663985.1 |
||
| CDS TCA 72 bp | ATGTTGGCTGCTCAGCCTGTTGCTGTTTCTGTAGCTTaGACCACATATATCCTCCTGTTTGACCACTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: MLAAQPVAVSVA*TTYILLFDHLM Trigger: CATCAAGTGGTCAAACAGGAGGATATATGTGGTTCAAGCTACAGAAACAGCAACAGGCTGAGCAGCCAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656088.1 |
||
| CDS GCA 72 bp | ACTATGTACTGTGGTCTGTCATATTTCCAAGAGCCATaGCTAAAGCACAGTAGGGCTGATGTCAGATGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TMYCGLSYFQEP*LKHSRADVRCS Trigger: AGAGCATCTGACATCAGCCCTACTGTGCTTTAGGCATGGCTCTTGGAAATATGACAGACCACAGTACATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
||
| CDS CCA 72 bp | ATAAGCCTCTCTTCCATGTATACATGGAATTGGGCCTaGATTCTGACCCATCTTAAGAGGGTAGAAGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ISLSSMYTWNWA*ILTHLKRVEVV Trigger: CACCACTTCTACCCTCTTAAGATGGGTCAGAATCCAGGCCCAATTCCATGTATACATGGAAGAGAGGCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000453784.2 ENST00000653855.1 ENST00000655241.1 ENST00000655505.1 ENST00000656088.1 ENST00000656122.1 ENST00000656780.1 ENST00000656842.1 ENST00000657079.1 ENST00000662917.1 ENST00000671574.1 |
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| CDS CAA 72 bp | GTGTGGTGTTATTTCTTAGGCCTCTGTTCTGTTCCCTaGGTCTATGTATCTGTTTTGGTACCAGCACCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: VWCYFLGLCSVP*VYVSVLVPAPS Trigger: GCTTGGTGCTGGTACCAAAACAGATACATAGACCAAGGGAACAGAACAGAGGCCTAAGAAATAACACCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000453784.2 ENST00000655241.1 ENST00000655505.1 ENST00000656122.1 ENST00000656780.1 ENST00000656842.1 ENST00000657079.1 |
||
| CDS CAA 72 bp | GAGTCACCAGCTTTTTCAAGCAACTTCAGTTCCCAATaGTGTCAGCTTATGTCTTCTGGGATGCACACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ESPAFSSNFSSQ*CQLMSSGMHTP Trigger: TGGAGTGTGCATCCCAGAAGACATAAGCTGACACAATTGGGAACTGAAGTTGCTTGAAAAAGCTGGTGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000653166.1 ENST00000655241.1 ENST00000655294.1 ENST00000662917.1 |
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| CDS CAA 90 bp | GAAGTACACAGTCACTCTAGCTTGTCCAGTGACTCAGTCTTTATATaGGTTCCACAACACTGTATCAGGGCAGGTCTAGAAACTTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: EVHSHSSLSSDSVFI*VPQHCIRAGLETSH Trigger: GTGTGAAGTTTCTAGACCTGCCCTGATACAGTGTTGTGGAACCAATATAAAGACTGAGTCACTGGACAAGCTAGAGTGACTGTGTACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
||
| CDS TCA 72 bp | CTCAGTCTGAAAGTTGGCTCAAGCTTGGAAAGTAGATaGGTGATTGAAATTTCCACTGGAGTGGCTGACATC | + |
|
Preference number: 6 (lower is better) Translates to: LSLKVGSSLESR*VIEISTGVADI Trigger: GATGTCAGCCACTCCAGTGGAAATTTCAATCACTCATCTACTTTCCAAGCTTGAGCCAACTTTCAGACTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
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| CDS TCA 72 bp | GAGATTCTTGGACATGTAGTTTCTGCATTCTTCTCTTaGCTACAGAGGAGACCTTGGATGCAAACGGTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: EILGHVVSAFFS*LQRRPWMQTVV Trigger: GACTACCGTTTGCATCCAAGGTCTCCTCTGTAGTCAAGAGAAGAATGCAGAAACTACATGTCCAAGAATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000453784.2 ENST00000655505.1 ENST00000656088.1 ENST00000657774.1 ENST00000663985.1 ENST00000666492.1 ENST00000668315.1 |
||
| CDS GCA 72 bp | CGTGGAAATGAACTTAACCTTATCTTCTGGTTAAGTTaGCAAGAGGGAATGTGGGAAAAGATCTCATGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RGNELNLIFWLS*QEGMWEKISWR Trigger: CCGCCATGAGATCTTTTCCCACATTCCCTCTTGGCAACTTAACCAGAAGATAAGGTTAAGTTCATTTCCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
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| CDS CCA 72 bp | ATCAGGGCAGGTCTAGAAACTTCACACTATGTACTGTaGTCTGTCATATTTCCAAGAGCCATGCCTAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: IRAGLETSHYVL*SVIFPRAMPKA Trigger: TGCTTTAGGCATGGCTCTTGGAAATATGACAGACCACAGTACATAGTGTGAAGTTTCTAGACCTGCCCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
||
| CDS CCA 72 bp | GAACTTTGTGGATGTGATGAGTTGAGGATCTTTAGATaGAGAGGTTACCCTGCATGTGATCACAAGGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ELCGCDELRIFR*RGYPACDHKVL Trigger: AAGGACCTTGTGATCACATGCAGGGTAACCTCTCCATCTAAAGATCCTCAACTCATCACATCCACAAAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654158.1 |
||
| CDS CAA 72 bp | AGTCACTCTAGCTTGTCCAGTGACTCAGTCTTTATATaGGTTCCACAACACTGTATCAGGGCAGGTCTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SHSSLSSDSVFI*VPQHCIRAGLE Trigger: TTCTAGACCTGCCCTGATACAGTGTTGTGGAACCAATATAAAGACTGAGTCACTGGACAAGCTAGAGTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
||
| CDS CAA 72 bp | CACTCCAACCTCTCCAGAAATCTAAGTATGCAGATGTaGGATAACAGCTACTGGACAGAGGTGATCCTACAA | + |
|
Preference number: 6 (lower is better) Translates to: HSNLSRNLSMQM*DNSYWTEVILQ Trigger: TTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGGTTGGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653166.1 |
||
| CDS CAA 72 bp | GATGTTCTTTCCCGAGCAATTCCTGAAGTGTCTCCATaGGAGGTGACCTCTGTTCTTGCTAGACATGATTTT | + |
|
Preference number: 6 (lower is better) Translates to: DVLSRAIPEVSP*EVTSVLARHDF Trigger: AAAATCATGTCTAGCAAGAACAGAGGTCACCTCCAATGGAGACACTTCAGGAATTGCTCGGGAAAGAACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656088.1 |
||
| CDS CAA 90 bp | TCATGGTCATTCATGGATATCACATCAAATGATGTACTGTGTGCTTaGTTCACCTTTGAATCCTCGTGCCTCCGAAGATGCAACCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SWSFMDITSNDVLCA*FTFESSCLRRCNLR Trigger: TCTCAGGTTGCATCTTCGGAGGCACGAGGATTCAAAGGTGAACAAAGCACACAGTACATCATTTGATGTGATATCCATGAATGACCATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655505.1 ENST00000656842.1 |
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| CDS TCA 72 bp | CCCTTATATCAGTCTGTTTTCCTAGGTCACCACTGGTaGCATATTTGTAAGTTGGGTCACCACCTAGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PLYQSVFLGHHW*HICKLGHHLVS Trigger: TGAAACTAGGTGGTGACCCAACTTACAAATATGTCACCAGTGGTGACCTAGGAAAACAGACTGATATAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423581.2 |
||
| CDS CCA 72 bp | ATGCAGATTTGTTACATAGGTGTACATGTGCCATGGTaGTTTTCTGCACCCATCAACCCACCATCTACATTA | + |
|
Preference number: 6 (lower is better) Translates to: MQICYIGVHVPW*FSAPINPPSTL Trigger: TAATGTAGATGGTGGGTTGATGGGTGCAGAAAACCACCATGGCACATGTACACCTATGTAACAAATCTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453784.2 |
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| CDS CAA 72 bp | AGAGATTCTTGGACATGTAGTTTCTGCATTCTTCTCTaGACTACAGAGGAGACCTTGGATGCAAACGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RDSWTCSFCILL*TTEETLDANGS Trigger: ACTACCGTTTGCATCCAAGGTCTCCTCTGTAGTCAAGAGAAGAATGCAGAAACTACATGTCCAAGAATCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000453784.2 ENST00000655505.1 ENST00000656088.1 ENST00000657774.1 ENST00000663985.1 ENST00000666492.1 ENST00000668315.1 |
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| CDS CAA 72 bp | GTTCAACTCCCACTTATGAGTGACAACATGCGGTGTTaGGTTTTCTGTTCCTGTGTTAGTTTGCTGAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: VQLPLMSDNMRC*VFCSCVSLLRM Trigger: CATTCTCAGCAAACTAACACAGGAACAGAAAACCAAACACCGCATGTTGTCACTCATAAGTGGGAGTTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453784.2 |
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| CDS CAA 72 bp | TTCATGGATATCACATCAAATGATGTACTGTGTGCTTaGTTCACCTTTGAATCCTCGTGCCTCCGAAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: FMDITSNDVLCA*FTFESSCLRRC Trigger: GCATCTTCGGAGGCACGAGGATTCAAAGGTGAACAAAGCACACAGTACATCATTTGATGTGATATCCATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655505.1 ENST00000656842.1 |
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| CDS CAA 72 bp | TTGACTGTCCTCTCCAGAAATCTAAGTATGCAGATGTaGGATAACAGCTACTGGACAGAGGTGATCCTACAA | + |
|
Preference number: 6 (lower is better) Translates to: LTVLSRNLSMQM*DNSYWTEVILQ Trigger: TTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGGACAGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655294.1 ENST00000657774.1 |
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| CDS CAA 72 bp | AGACTCCATCTCTCCAGAAATCTAAGTATGCAGATGTaGGATAACAGCTACTGGACAGAGGTGATCCTACAA | + |
|
Preference number: 6 (lower is better) Translates to: RLHLSRNLSMQM*DNSYWTEVILQ Trigger: TTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGATGGAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670142.1 |
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| CDS CAA 90 bp | AGTCTGGAAAGAGATTCTTGGACATGTAGTTTCTGCATTCTTCTCTaGACTACAGAGGAGACCTTGGATGCAAACGGTAGTCATGTAACT | + |
|
Preference number: 6 (lower is better) Translates to: SLERDSWTCSFCILL*TTEETLDANGSHVT Trigger: AGTTACATGACTACCGTTTGCATCCAAGGTCTCCTCTGTAGTCAAGAGAAGAATGCAGAAACTACATGTCCAAGAATCTCTTTCCAGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000453784.2 ENST00000655505.1 ENST00000656088.1 ENST00000657774.1 ENST00000663985.1 ENST00000666492.1 ENST00000668315.1 |
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| CDS CAA 90 bp | GTGCCACTGCACTCCAACCTCTCCAGAAATCTAAGTATGCAGATGTaGGATAACAGCTACTGGACAGAGGTGATCCTACAATTATATTAT | + |
|
Preference number: 6 (lower is better) Translates to: VPLHSNLSRNLSMQM*DNSYWTEVILQLYY Trigger: ATAATATAATTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGGTTGGAGTGCAGTGGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653166.1 |
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| CDS TCA 72 bp | GCGAGTGCAAAAATAGGCATGTCAAGTCTCAGGCTCTaGTGTAAGTCTGACACCTCTTTATATTCAAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASAKIGMSSLRL*CKSDTSLYSKL Trigger: AAGCTTTGAATATAAAGAGGTGTCAGACTTACATCAGAGCCTGAGACTTGACATGCCTATTTTTGCACTCGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 22 transcripts: ENST00000423581.2 ENST00000453784.2 ENST00000653166.1 ENST00000653855.1 ENST00000654158.1 ENST00000654771.1 ENST00000655241.1 ENST00000655294.1 ENST00000655505.1 ENST00000655533.1 ENST00000656088.1 ENST00000656122.1 ENST00000656780.1 ENST00000656842.1 ENST00000657079.1 ENST00000662917.1 ENST00000663985.1 ENST00000666492.1 ENST00000668315.1 ENST00000668910.1 ENST00000670142.1 ENST00000671574.1 |
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| CDS TCA 72 bp | GATTTGGAGGGAGCAATGCCTATGAAATTTGAAAAATaGGCGAGTGCAAAAATAGGCATGTCAAGTCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: DLEGAMPMKFEK*ASAKIGMSSLR Trigger: CCTGAGACTTGACATGCCTATTTTTGCACTCGCTCATTTTTCAAATTTCATAGGCATTGCTCCCTCCAAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 22 transcripts: ENST00000423581.2 ENST00000453784.2 ENST00000653166.1 ENST00000653855.1 ENST00000654158.1 ENST00000654771.1 ENST00000655241.1 ENST00000655294.1 ENST00000655505.1 ENST00000655533.1 ENST00000656088.1 ENST00000656122.1 ENST00000656780.1 ENST00000656842.1 ENST00000657079.1 ENST00000662917.1 ENST00000663985.1 ENST00000666492.1 ENST00000668315.1 ENST00000668910.1 ENST00000670142.1 ENST00000671574.1 |
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| CDS TCA 72 bp | TGTTTCTGTAGCTTGAACCACATATATCCTCCTGTTTaGCCACTTGATGTTCTTTCCCGAGCAATTCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: CFCSLNHIYPPV*PLDVLSRAIPE Trigger: TTCAGGAATTGCTCGGGAAAGAACATCAAGTGGTCAAACAGGAGGATATATGTGGTTCAAGCTACAGAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656088.1 |
||
| CDS GCA 72 bp | ACCATTTGGGTATGTGTCCTAGAGTTCACTGCAATCTaGCATCATGTATTTGATTTTTGTGTGGCCACACAA | + |
|
Preference number: 6 (lower is better) Translates to: TIWVCVLEFTAI*HHVFDFCVATQ Trigger: TTGTGTGGCCACACAAAAATCAAATACATGATGGCAGATTGCAGTGAACTCTAGGACACATACCCAAATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000415182.1 |
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| CDS GCA 72 bp | TTAAACAGGTGGGGTATAATTTACACTTGGTTCCTCTaGCAACACCCAATGCCCAAATTAAAAACTGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LNRWGIIYTWFL*QHPMPKLKTGC Trigger: ACAGCCAGTTTTTAATTTGGGCATTGGGTGTTGGCAGAGGAACCAAGTGTAAATTATACCCCACCTGTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654158.1 |
||
| CDS CAA 72 bp | CATGGATATCTCTCCAGAAATCTAAGTATGCAGATGTaGGATAACAGCTACTGGACAGAGGTGATCCTACAA | + |
|
Preference number: 6 (lower is better) Translates to: HGYLSRNLSMQM*DNSYWTEVILQ Trigger: TTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGATATCCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000453784.2 ENST00000653855.1 ENST00000654771.1 ENST00000655241.1 ENST00000656088.1 ENST00000656122.1 ENST00000656780.1 ENST00000657079.1 ENST00000662917.1 ENST00000671574.1 |
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| CDS CAA 72 bp | TTTGTGCTTCTCTCCAGAAATCTAAGTATGCAGATGTaGGATAACAGCTACTGGACAGAGGTGATCCTACAA | + |
|
Preference number: 6 (lower is better) Translates to: FVLLSRNLSMQM*DNSYWTEVILQ Trigger: TTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGAAGCACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668315.1 |
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| CDS CAA 72 bp | TTTACCTACCTCTCCAGAAATCTAAGTATGCAGATGTaGGATAACAGCTACTGGACAGAGGTGATCCTACAA | + |
|
Preference number: 6 (lower is better) Translates to: FTYLSRNLSMQM*DNSYWTEVILQ Trigger: TTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGGTAGGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666492.1 |
||
| CDS CAA 90 bp | TCCAGTAATATCACACTTGTCAGAACAGCTTTGTATGTCTACCATTaGGGTATGTGTCCTAGAGTTCACTGCAATCTGCCATCATGTATT | + |
|
Preference number: 6 (lower is better) Translates to: SSNITLVRTALYVYH*GMCPRVHCNLPSCI Trigger: AATACATGATGGCAGATTGCAGTGAACTCTAGGACACATACCCAAATGGTAGACATACAAAGCTGTTCTGACAAGTGTGATATTACTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415182.1 |
||
| CDS CAA 90 bp | AACAGAGCGAGACTCCATCTCTCCAGAAATCTAAGTATGCAGATGTaGGATAACAGCTACTGGACAGAGGTGATCCTACAATTATATTAT | + |
|
Preference number: 6 (lower is better) Translates to: NRARLHLSRNLSMQM*DNSYWTEVILQLYY Trigger: ATAATATAATTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGATGGAGTCTCGCTCTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670142.1 |
||
| CDS TCA 72 bp | TACATATTAACCAGGTCCAGTGACTCCAACCATGAATaGTGTCTTTTCTCATGTATAAGGTCCAGAGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: YILTRSSDSNHE*CLFSCIRSRGS Trigger: AGAACCTCTGGACCTTATACATGAGAAAAGACATCATTCATGGTTGGAGTCACTGGACCTGGTTAATATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
||
| CDS TCA 72 bp | TTACATTGTATATGGAACTTTGTGGATGTGATGAGTTaGGGATCTTTAGATGGAGAGGTTACCCTGCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: LHCIWNFVDVMS*GSLDGEVTLHV Trigger: CACATGCAGGGTAACCTCTCCATCTAAAGATCCTCAACTCATCACATCCACAAAGTTCCATATACAATGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654158.1 |
||
| CDS GCA 72 bp | TGTAAGTTGGGTCACCACCTAGTTTCAAAAACTATCTaGACCCAACCAAACATGCTACTTAGGATGCAATAT | + |
|
Preference number: 6 (lower is better) Translates to: CKLGHHLVSKTI*TQPNMLLRMQY Trigger: ATATTGCATCCTAAGTAGCATGTTTGGTTGGGTGCAGATAGTTTTTGAAACTAGGTGGTGACCCAACTTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423581.2 |
||
| CDS CAA 72 bp | GGCACTGATCTCTTCTATTGTATCTGGAAGGCAATATaGCTTTATGAAGTCTCTTGGCTGTGGTATAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GTDLFYCIWKAI*LYEVSWLWYKD Trigger: GTCTTTATACCACAGCCAAGAGACTTCATAAAGCAATATTGCCTTCCAGATACAATAGAAGAGATCAGTGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415182.1 |
||
| CDS CAA 72 bp | ACATACCCAAGTCTACCCATTCCAGTAATATCACACTaGTCAGAACAGCTTTGTATGTCTACCATTTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: TYPSLPIPVISH*SEQLCMSTIWV Trigger: TACCCAAATGGTAGACATACAAAGCTGTTCTGACAAGTGTGATATTACTGGAATGGGTAGACTTGGGTATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415182.1 |
||
| CDS CAA 72 bp | AGAATTTGTCTCTCCAGAAATCTAAGTATGCAGATGTaGGATAACAGCTACTGGACAGAGGTGATCCTACAA | + |
|
Preference number: 6 (lower is better) Translates to: RICLSRNLSMQM*DNSYWTEVILQ Trigger: TTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGACAAATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668910.1 |
||
| CDS CAA 90 bp | TACTGGACAGAGGTGATCCTACAATTATATTATTTCTTCATCACGTaGCCTTGTCCAAATACGTATAAGCTGTCTAGAGTCTGGAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: YWTEVILQLYYFFIT*PCPNTYKLSRVWKE Trigger: CTCTTTCCAGACTCTAGACAGCTTATACGTATTTGGACAAGGCAACGTGATGAAGAAATAATATAATTGTAGGATCACCTCTGTCCAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000453784.2 ENST00000655505.1 ENST00000656088.1 ENST00000657774.1 ENST00000663985.1 ENST00000666492.1 ENST00000668315.1 |
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| CDS CAA 90 bp | TACTGGACAGAGGTGATCCTACAATTATATTATTTCTTCATCACGTaGCCTTGTCCAAATACGTATAAGCTGTCTAGAGTCACCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: YWTEVILQLYYFFIT*PCPNTYKLSRVTSF Trigger: AAAGCTGGTGACTCTAGACAGCTTATACGTATTTGGACAAGGCAACGTGATGAAGAAATAATATAATTGTAGGATCACCTCTGTCCAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000653166.1 ENST00000655241.1 ENST00000655294.1 ENST00000662917.1 |
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| CDS TCA 72 bp | GTATGCAGATGTTGGATAACAGCTACTGGACAGAGGTaGTCCTACAATTATATTATTTCTTCATCACGTTGC | + |
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Preference number: 6 (lower is better) Translates to: VCRCWITATGQR*SYNYIISSSRC Trigger: GCAACGTGATGAAGAAATAATATAATTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000453784.2 ENST00000653166.1 ENST00000653855.1 ENST00000654158.1 ENST00000654771.1 ENST00000655241.1 ENST00000655294.1 ENST00000655505.1 ENST00000655533.1 ENST00000656088.1 ENST00000656122.1 ENST00000656780.1 ENST00000656842.1 ENST00000657079.1 ENST00000657774.1 ENST00000662917.1 ENST00000663985.1 ENST00000666492.1 ENST00000668315.1 ENST00000668910.1 ENST00000670142.1 ENST00000671574.1 |
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| CDS TCA 72 bp | GTACATATGCCACATTTTCTTAGTCCAGTCTATCATTaGTGGGCACTTGGGTTGGTTCTAAATCTTTGCTAT | + |
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Preference number: 6 (lower is better) Translates to: VHMPHFLSPVYH*WALGLVLNLCY Trigger: ATAGCAAAGATTTAGAACCAACCCAAGTGCCCATCAATGATAGACTGGACTAAGAAAATGTGGCATATGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453784.2 |
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| CDS TCA 72 bp | GTCTCAAGAGATTACACAATAAACATGTTGCTCCTATaGTGGTGTCAGCAGTCTCAGAAATTCATCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: VSRDYTINMLLL*WCQQSQKFIIL Trigger: CAAGATGATGAATTTCTGAGACTGCTGACACCATCATAGGAGCAACATGTTTATTGTGTAATCTCTTGAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668315.1 |
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| CDS GCA 72 bp | GCACTGATCTCTTCTATTGTATCTGGAAGGCAATATTaGTTTATGAAGTCTCTTGGCTGTGGTATAAAGACA | + |
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Preference number: 6 (lower is better) Translates to: ALISSIVSGRQY*FMKSLGCGIKT Trigger: TGTCTTTATACCACAGCCAAGAGACTTCATAAAGCAATATTGCCTTCCAGATACAATAGAAGAGATCAGTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415182.1 |
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| CDS CCA 72 bp | CATTTCTCAGAAAAACAGAGCTTCTGCTTTAATTATTaGACTCTCAGTCTGAAAGTTGGCTCAAGCTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: HFSEKQSFCFNY*TLSLKVGSSLE Trigger: TTCCAAGCTTGAGCCAACTTTCAGACTGAGAGTCCAATAATTAAAGCAGAAGCTCTGTTTTTCTGAGAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
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| CDS CAA 72 bp | GTTTTTGTTAATCCTGAAGTACACAGTCACTCTAGCTaGTCCAGTGACTCAGTCTTTATATTGGTTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: VFVNPEVHSHSS*SSDSVFILVPQ Trigger: TTGTGGAACCAATATAAAGACTGAGTCACTGGACAAGCTAGAGTGACTGTGTACTTCAGGATTAACAAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
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| CDS CAA 72 bp | CTCCCTTTTCCATATGTACCTGCGGCTACAGACACTTaGAGTAGAGGAAGAGAATTATCTTTACAGTATATA | + |
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Preference number: 6 (lower is better) Translates to: LPFPYVPAATDT*SRGRELSLQYI Trigger: TATATACTGTAAAGATAATTCTCTTCCTCTACTCAAAGTGTCTGTAGCCGCAGGTACATATGGAAAAGGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415182.1 |
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| CDS CAA 90 bp | GAAACTAATGTTTTTGTTAATCCTGAAGTACACAGTCACTCTAGCTaGTCCAGTGACTCAGTCTTTATATTGGTTCCACAACACTGTATC | + |
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Preference number: 6 (lower is better) Translates to: ETNVFVNPEVHSHSS*SSDSVFILVPQHCI Trigger: GATACAGTGTTGTGGAACCAATATAAAGACTGAGTCACTGGACAAGCTAGAGTGACTGTGTACTTCAGGATTAACAAAAACATTAGTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
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| CDS CAA 90 bp | TACTGGACAGAGGTGATCCTACAATTATATTATTTCTTCATCACGTaGCCTTGTCCAAATACGTATAAGCTGTCTAGAGTCTGTAACAAC | + |
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Preference number: 6 (lower is better) Translates to: YWTEVILQLYYFFIT*PCPNTYKLSRVCNN Trigger: GTTGTTACAGACTCTAGACAGCTTATACGTATTTGGACAAGGCAACGTGATGAAGAAATAATATAATTGTAGGATCACCTCTGTCCAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656780.1 |
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| CDS CAA 90 bp | GGAAACAGGAGAATTTGTCTCTCCAGAAATCTAAGTATGCAGATGTaGGATAACAGCTACTGGACAGAGGTGATCCTACAATTATATTAT | + |
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Preference number: 6 (lower is better) Translates to: GNRRICLSRNLSMQM*DNSYWTEVILQLYY Trigger: ATAATATAATTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGACAAATTCTCCTGTTTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668910.1 |
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| CDS CAA 90 bp | TTGGTCCATTTTGTGCTTCTCTCCAGAAATCTAAGTATGCAGATGTaGGATAACAGCTACTGGACAGAGGTGATCCTACAATTATATTAT | + |
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Preference number: 6 (lower is better) Translates to: LVHFVLLSRNLSMQM*DNSYWTEVILQLYY Trigger: ATAATATAATTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGAAGCACAAAATGGACCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668315.1 |
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| CDS TCA 72 bp | ATCTTAGATTCCTACATAATAGAGTTCCTCAGCTGTTaGGTTGCTGATAACTGGCATGGAAATTATGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: ILDSYIIEFLSC*VADNWHGNYVG Trigger: ACCAACATAATTTCCATGCCAGTTATCAGCAACTCAACAGCTGAGGAACTCTATTATGTAGGAATCTAAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
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| CDS TCA 72 bp | TATTGTAGATTTGCCATCAAGAGACCAGATAATCTTTaGGAAATAGTGATATATGATGCTGATCCCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: YCRFAIKRPDNL*EIVIYDADPTS Trigger: GCTGGTGGGATCAGCATCATATATCACTATTTCTCAAAGATTATCTGGTCTCTTGATGGCAAATCTACAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000453784.2 ENST00000663985.1 |
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| CDS CCA 72 bp | TATGAGAATTTAAACAGGTGGGGTATAATTTACACTTaGTTCCTCTGCCAACACCCAATGCCCAAATTAAAA | + |
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Preference number: 6 (lower is better) Translates to: YENLNRWGIIYT*FLCQHPMPKLK Trigger: TTTTAATTTGGGCATTGGGTGTTGGCAGAGGAACCAAGTGTAAATTATACCCCACCTGTTTAAATTCTCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654158.1 |
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| CDS CAA 72 bp | GTTAATTTCATTATCCTAACATGCATACCCCATTCATaGCCCTTGCCCTTTCAAATGTCTAAATCATCTCAC | + |
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Preference number: 6 (lower is better) Translates to: VNFIILTCIPHS*PLPFQMSKSSH Trigger: GTGAGATGATTTAGACATTTGAAAGGGCAAGGGCAATGAATGGGGTATGCATGTTAGGATAATGAAATTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423581.2 |
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| CDS CAA 90 bp | ATGGTCATTCATGGATATCTCTCCAGAAATCTAAGTATGCAGATGTaGGATAACAGCTACTGGACAGAGGTGATCCTACAATTATATTAT | + |
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Preference number: 6 (lower is better) Translates to: MVIHGYLSRNLSMQM*DNSYWTEVILQLYY Trigger: ATAATATAATTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCTGGAGAGATATCCATGAATGACCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000453784.2 ENST00000653855.1 ENST00000654771.1 ENST00000655241.1 ENST00000656088.1 ENST00000656122.1 ENST00000656780.1 ENST00000657079.1 ENST00000662917.1 ENST00000671574.1 |
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| CDS CAA 90 bp | TTCTTCCATTTGCTTGCTAAAATTTGTTTGCAGCTTGAAAATCACTaGCTGTACTTTCATGGTCATTCATGGATATCTCTCCAGAAATCT | + |
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Preference number: 6 (lower is better) Translates to: FFHLLAKICLQLENH*LYFHGHSWISLQKS Trigger: AGATTTCTGGAGAGATATCCATGAATGACCATGAAAGTACAGCAAGTGATTTTCAAGCTGCAAACAAATTTTAGCAAGCAAATGGAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000453784.2 ENST00000653855.1 ENST00000655241.1 ENST00000656088.1 ENST00000656122.1 ENST00000656780.1 ENST00000657079.1 ENST00000662917.1 ENST00000671574.1 |
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| CDS TCA 72 bp | TTTCAGGGTCAAATGTTATTTCTAGTTCTAGATTTTTaGGGAATCACCACACTGTCTTCCACAATGGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: FQGQMLFLVLDF*GITTLSSTMVE Trigger: TTCAACCATTGTGGAAGACAGTGTGGTGATTCCTCAAAAATCTAGAACTAGAAATAACATTTGACCCTGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000453784.2 |
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| CDS TCA 72 bp | TTATTGTGCAGCCGATCAGAACTCTCCATTTTAGTCTaGTGTTGTTACAAACATGAACAAATATGGTCACAA | + |
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Preference number: 6 (lower is better) Translates to: LLCSRSELSILV*CCYKHEQIWSQ Trigger: TTGTGACCATATTTGTTCATGTTTGTAACAACATCAGACTAAAATGGAGAGTTCTGATCGGCTGCACAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655533.1 ENST00000668315.1 |
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| CDS GCA 72 bp | AATTATGTTGGTCCTTATCTCTCTGTACTGATTACATaGTACCACCTTTCCTTTGCTCTTCTAGAATTGTAT | + |
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Preference number: 6 (lower is better) Translates to: NYVGPYLSVLIT*YHLSFALLELY Trigger: ATACAATTCTAGAAGAGCAAAGGAAAGGTGGTAGCATGTAATCAGTACAGAGAGATAAGGACCAACATAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415182.1 ENST00000655039.1 |
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| CDS CCA 72 bp | GTTTTTAAAAATGGCACTGATCTCTTCTATTGTATCTaGAAGGCAATATTGCTTTATGAAGTCTCTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VFKNGTDLFYCI*KAILLYEVSWL Trigger: CAGCCAAGAGACTTCATAAAGCAATATTGCCTTCCAGATACAATAGAAGAGATCAGTGCCATTTTTAAAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000415182.1 |
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| CDS CCA 72 bp | CTTGAAAATCACTTGCTGTACTTTCATGGTCATTCATaGATATCACATCAAATGATGTACTGTGTGCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: LENHLLYFHGHS*ISHQMMYCVLC Trigger: ACAAAGCACACAGTACATCATTTGATGTGATATCCATGAATGACCATGAAAGTACAGCAAGTGATTTTCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655505.1 ENST00000656842.1 |
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| CDS CCA 72 bp | AAACAGGAGAATTTGTCTATTAACTGTAGTTTTGGATaGAACTCTGTCCAGCAACTGAAGGCTACTTTAATA | + |
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Preference number: 6 (lower is better) Translates to: KQENLSINCSFG*NSVQQLKATLI Trigger: TATTAAAGTAGCCTTCAGTTGCTGGACAGAGTTCCATCCAAAACTACAGTTAATAGACAAATTCTCCTGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662917.1 ENST00000671574.1 |
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| CDS CAA 72 bp | TTGCTTGCTAAAATTTGTTTGCAGCTTGAAAATCACTaGCTGTACTTTCATGGTCATTCATGGATATCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LLAKICLQLENH*LYFHGHSWISL Trigger: GAGAGATATCCATGAATGACCATGAAAGTACAGCAAGTGATTTTCAAGCTGCAAACAAATTTTAGCAAGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000453784.2 ENST00000653855.1 ENST00000655241.1 ENST00000656088.1 ENST00000656122.1 ENST00000656780.1 ENST00000657079.1 ENST00000662917.1 ENST00000671574.1 |
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| CDS CCA 72 bp | AGAAATCTAAGTATGCAGATGTTGGATAACAGCTACTaGACAGAGGTGATCCTACAATTATATTATTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RNLSMQMLDNSY*TEVILQLYYFF Trigger: GAAGAAATAATATAATTGTAGGATCACCTCTGTCCAGTAGCTGTTATCCAACATCTGCATACTTAGATTTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000453784.2 ENST00000653166.1 ENST00000653855.1 ENST00000654158.1 ENST00000654771.1 ENST00000655241.1 ENST00000655294.1 ENST00000655505.1 ENST00000655533.1 ENST00000656088.1 ENST00000656122.1 ENST00000656780.1 ENST00000656842.1 ENST00000657079.1 ENST00000657774.1 ENST00000662917.1 ENST00000663985.1 ENST00000666492.1 ENST00000668315.1 ENST00000668910.1 ENST00000670142.1 ENST00000671574.1 |
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| CDS CCA 72 bp | AAAAATATTGACTGTCCTATTAACTGTAGTTTTGGATaGAACTCTGTCCAGCAACTGAAGGCTACTTTAATA | + |
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Preference number: 6 (lower is better) Translates to: KNIDCPINCSFG*NSVQQLKATLI Trigger: TATTAAAGTAGCCTTCAGTTGCTGGACAGAGTTCCATCCAAAACTACAGTTAATAGGACAGTCAATATTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653855.1 |
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| CDS CAA 72 bp | TTGTTTGCTAAAATTTGTTTGCAGCTTGAAAATCACTaGCTGTACTTTCATGGTCATTCATGGATATCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LFAKICLQLENH*LYFHGHSWISL Trigger: GAGAGATATCCATGAATGACCATGAAAGTACAGCAAGTGATTTTCAAGCTGCAAACAAATTTTAGCAAACAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654771.1 |
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