Pregenerated sensors for LINC01681 (Homo sapiens)
Ensembl gene IDs: ENSG00000233985Ensembl transcript IDs: ENST00000439184.1, ENST00000654877.1, ENST00000654909.1, ENST00000657163.1, ENST00000657208.1, ENST00000660112.1, ENST00000661719.1, ENST00000661826.1, ENST00000666308.1, ENST00000669101.1, ENST00000669112.1, ENST00000669113.1, ENST00000671647.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTTCAGCGAGGTGACTTGGCCAGAGCAGCACTCAGGATCCAGTCTTaGTACAGTCTTCTCCCAGATGCTTGCCTGATCCCAGTGTGCACC | + |
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Preference number: 5 (lower is better) Translates to: FQRGDLARAALRIQS*YSLLPDACLIPVCT Trigger: GGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGTGCTGCTCTGGCCAAGTCACCTCGCTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661719.1 |
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| CDS GCA 90 bp | GCAGCACTCAGGATCCAGTCTTGCTACAGTCTTCTCCCAGATGCTTaGCTGATCCCAGTGTGCACCGAGCTTCTTGTTTCTGTGCACTTC | + |
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Preference number: 5 (lower is better) Translates to: AALRIQSCYSLLPDA*LIPVCTELLVSVHF Trigger: GAAGTGCACAGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661719.1 |
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| CDS GCA 90 bp | CAGTCTTGCTACAGTCTTCTCCCAGATGCTTGCCTGATCCCAGTGTaGACCGAGCTTCTTGTTTCTGTGCACTTCCTGATTCTTGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: QSCYSLLPDACLIPV*TELLVSVHFLILAA Trigger: AGCGGCAAGAATCAGGAAGTGCACAGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000439184.1 ENST00000654877.1 ENST00000654909.1 ENST00000660112.1 ENST00000661719.1 ENST00000666308.1 ENST00000669101.1 ENST00000669112.1 ENST00000669113.1 ENST00000671647.1 |
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| CDS GCA 90 bp | GAACTGCTCAGGATCCAGTCTTGCTACAGTCTTCTCCCAGATGCTTaGCTGATCCCAGTGTGCACCGAGCTTCTTGTTTCTGTGCACTTC | + |
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Preference number: 5 (lower is better) Translates to: ELLRIQSCYSLLPDA*LIPVCTELLVSVHF Trigger: GAAGTGCACAGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGCAGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439184.1 |
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| CDS CCA 90 bp | TTGGTAGGTTGCACAAGTGGAAGTGGAGATTTCAGCGAGGTGACTTaGCCAGAGCAGCACTCAGGATCCAGTCTTGCTACAGTCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LVGCTSGSGDFSEVT*PEQHSGSSLATVFS Trigger: GGAGAAGACTGTAGCAAGACTGGATCCTGAGTGCTGCTCTGGCCAAGTCACCTCGCTGAAATCTCCACTTCCACTTGTGCAACCTACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661719.1 |
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| CDS GCA 90 bp | AACTGGCTTTGTTCCTGCAGAATAGGAAAACTGGTCCCAGTCCAGTaGTCAGGATCCAGTCTTGCTACAGTCTTCTCCCAGATGCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: NWLCSCRIGKLVPVQ*SGSSLATVFSQMLA Trigger: GGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGCACTGGACTGGGACCAGTTTTCCTATTCTGCAGGAACAAAGCCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS GCA 90 bp | AACACTCTCAGGATCCAGTCTTGCTACAGTCTTCTCCCAGATGCTTaGCTGATCCCAGTGTGCACCGAGCTTCTTGTTTCTGTGCACTTC | + |
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Preference number: 5 (lower is better) Translates to: NTLRIQSCYSLLPDA*LIPVCTELLVSVHF Trigger: GAAGTGCACAGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000669112.1 ENST00000669113.1 |
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| CDS GCA 90 bp | TTTTGTAATCACTCTGGCAGCTGTGTAGAGAGTGGCTTGGTAGGTTaGACAAGTGGAAGTGGAGATTTCAGCGAGGTGACTTGGCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: FCNHSGSCVESGLVG*TSGSGDFSEVTWPE Trigger: CTCTGGCCAAGTCACCTCGCTGAAATCTCCACTTCCACTTGTGCAACCTACCAAGCCACTCTCTACACAGCTGCCAGAGTGATTACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000654877.1 ENST00000654909.1 ENST00000657163.1 ENST00000657208.1 ENST00000660112.1 ENST00000661719.1 ENST00000661826.1 ENST00000669101.1 ENST00000669112.1 ENST00000669113.1 ENST00000671647.1 |
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| CDS GCA 90 bp | AGATTTCTCAGGATCCAGTCTTGCTACAGTCTTCTCCCAGATGCTTaGCTGATCCCAGTGTGCACCGAGCTTCTTGTTTCTGTGCACTTC | + |
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Preference number: 5 (lower is better) Translates to: RFLRIQSCYSLLPDA*LIPVCTELLVSVHF Trigger: GAAGTGCACAGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGAAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660112.1 |
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| CDS GCA 90 bp | CCCAGTGTGCACCGAGCTTCTTGTTTCTGTGCACTTCCTGATTCTTaGCGCTTGCATTGTACTGTTTTGACCAGTCTTGCAAACCGTAGT | + |
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Preference number: 5 (lower is better) Translates to: PSVHRASCFCALPDS*RLHCTVLTSLANRS Trigger: ACTACGGTTTGCAAGACTGGTCAAAACAGTACAATGCAAGCGGCAAGAATCAGGAAGTGCACAGAAACAAGAAGCTCGGTGCACACTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000439184.1 ENST00000654877.1 ENST00000654909.1 ENST00000661719.1 ENST00000666308.1 ENST00000669101.1 ENST00000669112.1 ENST00000669113.1 ENST00000671647.1 |
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| CDS GCA 90 bp | ATATTTCTCAGGATCCAGTCTTGCTACAGTCTTCTCCCAGATGCTTaGCTGATCCCAGTGTGCACCGAGCTTCTTGTTTCTGTGCACTTC | + |
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Preference number: 5 (lower is better) Translates to: IFLRIQSCYSLLPDA*LIPVCTELLVSVHF Trigger: GAAGTGCACAGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGAAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654877.1 ENST00000654909.1 ENST00000657208.1 ENST00000671647.1 |
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| CDS CCA 90 bp | TTGGTAGGTTGCACAAGTGGAAGTGGAGATTTCAGCGAGGTGACTTaGCCAGAGCAGCACTTGAGTTTGCAACACCACAGTGTTTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: LVGCTSGSGDFSEVT*PEQHLSLQHHSVLS Trigger: TGACAAAACACTGTGGTGTTGCAAACTCAAGTGCTGCTCTGGCCAAGTCACCTCGCTGAAATCTCCACTTCCACTTGTGCAACCTACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000654909.1 ENST00000657163.1 ENST00000657208.1 ENST00000660112.1 ENST00000661826.1 ENST00000669101.1 ENST00000669112.1 ENST00000671647.1 |
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| CDS CCA 90 bp | TGGTGTTTCCTCTTACGTAAAGGGTATGCATTAATGCAACACTTGTaGCCTCTCTCCATCTTTTGGCTCACTCCTGGAAGGGTGGCGGTA | + |
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Preference number: 5 (lower is better) Translates to: WCFLLRKGYALMQHL*PLSIFWLTPGRVAV Trigger: TACCGCCACCCTTCCAGGAGTGAGCCAAAAGATGGAGAGAGGCCACAAGTGTTGCATTAATGCATACCCTTTACGTAAGAGGAAACACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS GCA 90 bp | GTGACCCATATCTCATCCCGTGAGAATTCCCCCATTTGGGGGAAATaGATATTTCCTGCTCCTGGTGTTTCCTCTTACGTAAAGGGTATG | + |
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Preference number: 5 (lower is better) Translates to: VTHISSRENSPIWGK*IFPAPGVSSYVKGM Trigger: CATACCCTTTACGTAAGAGGAAACACCAGGAGCAGGAAATATGCATTTCCCCCAAATGGGGGAATTCTCACGGGATGAGATATGGGTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS TCA 90 bp | GGTAGAGAAGTGGTTCTGAGCCCATTAAAATTCATGTTCAGAGCCTaGTGGATCACATGGGAACTGCTCAGGATCCAGTCTTGCTACAGT | + |
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Preference number: 5 (lower is better) Translates to: GREVVLSPLKFMFRA*WITWELLRIQSCYS Trigger: ACTGTAGCAAGACTGGATCCTGAGCAGTTCCCATGTGATCCATCAGGCTCTGAACATGAATTTTAATGGGCTCAGAACCACTTCTCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439184.1 |
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| CDS TCA 90 bp | CTTCAGGTTCCAATCAGTTTGTGGAAGATTCACTCTGACAGCCTGTaGCCTCAGGGTAGAGAAGTGGTTCTGAGCCCATTAAAATTCATG | + |
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Preference number: 5 (lower is better) Translates to: LQVPISLWKIHSDSL*PQGREVVLSPLKFM Trigger: CATGAATTTTAATGGGCTCAGAACCACTTCTCTACCCTGAGGTCACAGGCTGTCAGAGTGAATCTTCCACAAACTGATTGGAACCTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000439184.1 ENST00000654877.1 ENST00000654909.1 ENST00000657208.1 ENST00000661826.1 ENST00000671647.1 |
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| CDS GCA 90 bp | CCTTCCCATTCGCTTTGTTATCCTTGCTGGAGCGATGCATTGTCTTaGGATGTAATAATCTCTCAGGATCCAGTCTTGCTACAGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: PSHSLCYPCWSDALS*DVIISQDPVLLQSS Trigger: AGAAGACTGTAGCAAGACTGGATCCTGAGAGATTATTACATCGCAAGACAATGCATCGCTCCAGCAAGGATAACAAAGCGAATGGGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669101.1 |
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| CDS TCA 90 bp | CATTTGACGCAATATATATTTATCTGTGACCCATATCTCATCCCGTaGGAATTCCCCCATTTGGGGGAAATGCATATTTCCTGCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: HLTQYIFICDPYLIP*EFPHLGEMHISCSW Trigger: CCAGGAGCAGGAAATATGCATTTCCCCCAAATGGGGGAATTCTCACGGGATGAGATATGGGTCACAGATAAATATATATTGCGTCAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS TCA 90 bp | CACATCCACTCTTTCCTAAAAGTAGTCTGCCTAAGGTGCCTTCCATaGACTCTTCATAACCCTTTCCTTCCCATTCGCTTTGTTATCCTT | + |
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Preference number: 5 (lower is better) Translates to: HIHSFLKVVCLRCLP*TLHNPFLPIRFVIL Trigger: AAGGATAACAAAGCGAATGGGAAGGAAAGGGTTATGAAGAGTTCATGGAAGGCACCTTAGGCAGACTACTTTTAGGAAAGAGTGGATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669101.1 |
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| CDS GCA 90 bp | GAAGTAGTAACTCAGTTGATTGGTGCTCTTGAGAAGAATTGGAGATaGTTAGCCCTGTCTCTTCCTTTCTCCTTCTCAGAAGAGCAATGT | + |
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Preference number: 5 (lower is better) Translates to: EVVTQLIGALEKNWR*LALSLPFSFSEEQC Trigger: ACATTGCTCTTCTGAGAAGGAGAAAGGAAGAGACAGGGCTAAGCATCTCCAATTCTTCTCAAGAGCACCAATCAACTGAGTTACTACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS CCA 90 bp | AGTAGCAATGAACTGGAAAGCCTTTGTGTAACTGAAGGGTTTCCGTaGGTTCCAGATTCTGAGTTTGTCCCAGAAGCCAAAACAATGATT | + |
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Preference number: 5 (lower is better) Translates to: SSNELESLCVTEGFP*VPDSEFVPEAKTMI Trigger: AATCATTGTTTTGGCTTCTGGGACAAACTCAGAATCTGGAACCCACGGAAACCCTTCAGTTACACAAAGGCTTTCCAGTTCATTGCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660112.1 ENST00000671647.1 |
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| CDS GCA 90 bp | TTTGATCACTCCATAGGTGATCAACGCAGAGTGAATGTCTTCAGTTaGAATATTCAATTGAAACACTCAACGCCTTGCCTTCTTGGCCTA | + |
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Preference number: 5 (lower is better) Translates to: FDHSIGDQRRVNVFS*NIQLKHSTPCLLGL Trigger: TAGGCCAAGAAGGCAAGGCGTTGAGTGTTTCAATTGAATATTGCAACTGAAGACATTCACTCTGCGTTGATCACCTATGGAGTGATCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660112.1 ENST00000671647.1 |
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| CDS TCA 90 bp | GGTTCATTTGAAGAGGTTCCATTTGACGCAATATATATTTATCTGTaGCCCATATCTCATCCCGTGAGAATTCCCCCATTTGGGGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: GSFEEVPFDAIYIYL*PISHPVRIPPFGGN Trigger: ATTTCCCCCAAATGGGGGAATTCTCACGGGATGAGATATGGGTCACAGATAAATATATATTGCGTCAAATGGAACCTCTTCAAATGAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS GCA 90 bp | TTTGATCACTCCATAGGTGATCAACGCAGAGTGAATGTCTTCAGTTaGAATATTCAATTGAAACACTCTCAGGATCCAGTCTTGCTACAG | + |
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Preference number: 5 (lower is better) Translates to: FDHSIGDQRRVNVFS*NIQLKHSQDPVLLQ Trigger: CTGTAGCAAGACTGGATCCTGAGAGTGTTTCAATTGAATATTGCAACTGAAGACATTCACTCTGCGTTGATCACCTATGGAGTGATCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000669112.1 ENST00000669113.1 |
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| CDS GCA 90 bp | TTTGATCACTCCATAGGTGATCAACGCAGAGTGAATGTCTTCAGTTaGAATATTCAATTGAAACACTCTCTCTTGACAGAGCAAATTCTT | + |
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Preference number: 5 (lower is better) Translates to: FDHSIGDQRRVNVFS*NIQLKHSLLTEQIL Trigger: AAGAATTTGCTCTGTCAAGAGAGAGTGTTTCAATTGAATATTGCAACTGAAGACATTCACTCTGCGTTGATCACCTATGGAGTGATCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000439184.1 ENST00000654909.1 ENST00000657208.1 ENST00000661826.1 |
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| CDS GCA 72 bp | GGTGACTTGGCCAGAGCAGCACTCAGGATCCAGTCTTaGTACAGTCTTCTCCCAGATGCTTGCCTGATCCCA | + |
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Preference number: 6 (lower is better) Translates to: GDLARAALRIQS*YSLLPDACLIP Trigger: TGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGTGCTGCTCTGGCCAAGTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661719.1 |
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| CDS GCA 72 bp | GGCTCCCTAAGGGACCTACAAGTACTTAAGTACAGCTaGTGGAGTGGAGAGGGAAGCCAGGGCCAAATCACA | + |
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Preference number: 6 (lower is better) Translates to: GSLRDLQVLKYS*WSGEGSQGQIT Trigger: TGTGATTTGGCCCTGGCTTCCCTCTCCACTCCAGCAGCTGTACTTAAGTACTTGTAGGTCCCTTAGGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661719.1 |
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| CDS CCA 72 bp | GCATTAATGCAACACTTGTGGCCTCTCTCCATCTTTTaGCTCACTCCTGGAAGGGTGGCGGTAGAGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: ALMQHLWPLSIF*LTPGRVAVERA Trigger: TGCCCTCTCTACCGCCACCCTTCCAGGAGTGAGCCAAAAGATGGAGAGAGGCCACAAGTGTTGCATTAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS CAA 72 bp | GAAAACTGGTCCCAGTCCAGTGCTCAGGATCCAGTCTaGCTACAGTCTTCTCCCAGATGCTTGCCTGATCCC | + |
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Preference number: 6 (lower is better) Translates to: ENWSQSSAQDPV*LQSSPRCLPDP Trigger: GGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGCACTGGACTGGGACCAGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS CAA 72 bp | TGCATTAATGCAACACTTGTGGCCTCTCTCCATCTTTaGGCTCACTCCTGGAAGGGTGGCGGTAGAGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: CINATLVASLHL*AHSWKGGGREG Trigger: GCCCTCTCTACCGCCACCCTTCCAGGAGTGAGCCAAAAGATGGAGAGAGGCCACAAGTGTTGCATTAATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS TCA 72 bp | TCCAGTCTTGCTACAGTCTTCTCCCAGATGCTTGCCTaGTCCCAGTGTGCACCGAGCTTCTTGTTTCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: SSLATVFSQMLA*SQCAPSFLFLC Trigger: GCACAGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000439184.1 ENST00000654877.1 ENST00000654909.1 ENST00000657208.1 ENST00000660112.1 ENST00000661719.1 ENST00000666308.1 ENST00000669101.1 ENST00000669112.1 ENST00000669113.1 ENST00000671647.1 |
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| CDS GCA 72 bp | AAAACTGGTCCCAGTCCAGTGCTCAGGATCCAGTCTTaGTACAGTCTTCTCCCAGATGCTTGCCTGATCCCA | + |
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Preference number: 6 (lower is better) Translates to: KTGPSPVLRIQS*YSLLPDACLIP Trigger: TGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGCACTGGACTGGGACCAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS CCA 72 bp | TGCACAAGTGGAAGTGGAGATTTCAGCGAGGTGACTTaGCCAGAGCAGCACTCAGGATCCAGTCTTGCTACA | + |
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Preference number: 6 (lower is better) Translates to: CTSGSGDFSEVT*PEQHSGSSLAT Trigger: TGTAGCAAGACTGGATCCTGAGTGCTGCTCTGGCCAAGTCACCTCGCTGAAATCTCCACTTCCACTTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661719.1 |
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| CDS CAA 72 bp | CAGGATCCAGTCTTGCTACAGTCTTCTCCCAGATGCTaGCCTGATCCCAGTGTGCACCGAGCTTCTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: QDPVLLQSSPRC*PDPSVHRASCF Trigger: GAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000439184.1 ENST00000654877.1 ENST00000654909.1 ENST00000657208.1 ENST00000660112.1 ENST00000661719.1 ENST00000666308.1 ENST00000669101.1 ENST00000669112.1 ENST00000669113.1 ENST00000671647.1 |
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| CDS CAA 72 bp | TTGCACAAGTGGAAGTGGAGATTTCAGCGAGGTGACTaGGCCAGAGCAGCACTCAGGATCCAGTCTTGCTAC | + |
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Preference number: 6 (lower is better) Translates to: LHKWKWRFQRGD*ARAALRIQSCY Trigger: GTAGCAAGACTGGATCCTGAGTGCTGCTCTGGCCAAGTCACCTCGCTGAAATCTCCACTTCCACTTGTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661719.1 |
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| CDS CAA 90 bp | GGAACTGCTCAGGATCCAGTCTTGCTACAGTCTTCTCCCAGATGCTaGCCTGATCCCAGTGTGCACCGAGCTTCTTGTTTCTGTGCACTT | + |
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Preference number: 6 (lower is better) Translates to: GTAQDPVLLQSSPRC*PDPSVHRASCFCAL Trigger: AAGTGCACAGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGCAGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439184.1 |
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| CDS CAA 90 bp | AGCAGCACTCAGGATCCAGTCTTGCTACAGTCTTCTCCCAGATGCTaGCCTGATCCCAGTGTGCACCGAGCTTCTTGTTTCTGTGCACTT | + |
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Preference number: 6 (lower is better) Translates to: SSTQDPVLLQSSPRC*PDPSVHRASCFCAL Trigger: AAGTGCACAGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGTGCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661719.1 |
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| CDS CAA 90 bp | CTTGGTAGGTTGCACAAGTGGAAGTGGAGATTTCAGCGAGGTGACTaGGCCAGAGCAGCACTCAGGATCCAGTCTTGCTACAGTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LGRLHKWKWRFQRGD*ARAALRIQSCYSLL Trigger: GAGAAGACTGTAGCAAGACTGGATCCTGAGTGCTGCTCTGGCCAAGTCACCTCGCTGAAATCTCCACTTCCACTTGTGCAACCTACCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661719.1 |
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| CDS CAA 90 bp | TCCAGTGCTCAGGATCCAGTCTTGCTACAGTCTTCTCCCAGATGCTaGCCTGATCCCAGTGTGCACCGAGCTTCTTGTTTCTGTGCACTT | + |
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Preference number: 6 (lower is better) Translates to: SSAQDPVLLQSSPRC*PDPSVHRASCFCAL Trigger: AAGTGCACAGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGCACTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS GCA 72 bp | AGGATCCAGTCTTGCTACAGTCTTCTCCCAGATGCTTaGCTGATCCCAGTGTGCACCGAGCTTCTTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: RIQSCYSLLPDA*LIPVCTELLVS Trigger: AGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000439184.1 ENST00000654877.1 ENST00000654909.1 ENST00000657208.1 ENST00000660112.1 ENST00000661719.1 ENST00000666308.1 ENST00000669101.1 ENST00000669112.1 ENST00000669113.1 ENST00000671647.1 |
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| CDS CCA 72 bp | TGCACAAGTGGAAGTGGAGATTTCAGCGAGGTGACTTaGCCAGAGCAGCACTTGAGTTTGCAACACCACAGT | + |
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Preference number: 6 (lower is better) Translates to: CTSGSGDFSEVT*PEQHLSLQHHS Trigger: ACTGTGGTGTTGCAAACTCAAGTGCTGCTCTGGCCAAGTCACCTCGCTGAAATCTCCACTTCCACTTGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000654909.1 ENST00000657163.1 ENST00000657208.1 ENST00000660112.1 ENST00000661826.1 ENST00000669101.1 ENST00000669112.1 ENST00000671647.1 |
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| CDS CAA 72 bp | TTGCACAAGTGGAAGTGGAGATTTCAGCGAGGTGACTaGGCCAGAGCAGCACTTGAGTTTGCAACACCACAG | + |
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Preference number: 6 (lower is better) Translates to: LHKWKWRFQRGD*ARAALEFATPQ Trigger: CTGTGGTGTTGCAAACTCAAGTGCTGCTCTGGCCAAGTCACCTCGCTGAAATCTCCACTTCCACTTGTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000654909.1 ENST00000657163.1 ENST00000657208.1 ENST00000660112.1 ENST00000661826.1 ENST00000669101.1 ENST00000669112.1 ENST00000671647.1 |
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| CDS CAA 90 bp | CTTGGTAGGTTGCACAAGTGGAAGTGGAGATTTCAGCGAGGTGACTaGGCCAGAGCAGCACTTGAGTTTGCAACACCACAGTGTTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LGRLHKWKWRFQRGD*ARAALEFATPQCFV Trigger: GACAAAACACTGTGGTGTTGCAAACTCAAGTGCTGCTCTGGCCAAGTCACCTCGCTGAAATCTCCACTTCCACTTGTGCAACCTACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000654909.1 ENST00000657163.1 ENST00000657208.1 ENST00000660112.1 ENST00000661826.1 ENST00000669101.1 ENST00000669112.1 ENST00000671647.1 |
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| CDS CAA 90 bp | CCGCGTTGTTTTTGTAATCACTCTGGCAGCTGTGTAGAGAGTGGCTaGGTAGGTTGCACAAGTGGAAGTGGAGATTTCAGCGAGGTGACT | + |
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Preference number: 6 (lower is better) Translates to: PRCFCNHSGSCVESG*VGCTSGSGDFSEVT Trigger: AGTCACCTCGCTGAAATCTCCACTTCCACTTGTGCAACCTACCAAGCCACTCTCTACACAGCTGCCAGAGTGATTACAAAAACAACGCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000654877.1 ENST00000654909.1 ENST00000657163.1 ENST00000657208.1 ENST00000660112.1 ENST00000661719.1 ENST00000661826.1 ENST00000669101.1 ENST00000669112.1 ENST00000669113.1 ENST00000671647.1 |
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| CDS CAA 90 bp | TCCTGGTGTTTCCTCTTACGTAAAGGGTATGCATTAATGCAACACTaGTGGCCTCTCTCCATCTTTTGGCTCACTCCTGGAAGGGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: SWCFLLRKGYALMQH*WPLSIFWLTPGRVA Trigger: CGCCACCCTTCCAGGAGTGAGCCAAAAGATGGAGAGAGGCCACAAGTGTTGCATTAATGCATACCCTTTACGTAAGAGGAAACACCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS CAA 90 bp | CAGATTTCTCAGGATCCAGTCTTGCTACAGTCTTCTCCCAGATGCTaGCCTGATCCCAGTGTGCACCGAGCTTCTTGTTTCTGTGCACTT | + |
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Preference number: 6 (lower is better) Translates to: QISQDPVLLQSSPRC*PDPSVHRASCFCAL Trigger: AAGTGCACAGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGAAATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660112.1 |
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| CDS CAA 90 bp | AAACACTCTCAGGATCCAGTCTTGCTACAGTCTTCTCCCAGATGCTaGCCTGATCCCAGTGTGCACCGAGCTTCTTGTTTCTGTGCACTT | + |
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Preference number: 6 (lower is better) Translates to: KHSQDPVLLQSSPRC*PDPSVHRASCFCAL Trigger: AAGTGCACAGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGAGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000669112.1 ENST00000669113.1 |
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| CDS GCA 72 bp | TACAGTCTTCTCCCAGATGCTTGCCTGATCCCAGTGTaGACCGAGCTTCTTGTTTCTGTGCACTTCCTGATT | + |
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Preference number: 6 (lower is better) Translates to: YSLLPDACLIPV*TELLVSVHFLI Trigger: AATCAGGAAGTGCACAGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000439184.1 ENST00000654877.1 ENST00000654909.1 ENST00000657208.1 ENST00000660112.1 ENST00000661719.1 ENST00000666308.1 ENST00000669101.1 ENST00000669112.1 ENST00000669113.1 ENST00000671647.1 |
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| CDS CCA 72 bp | GTGACCCATATCTCATCCCGTGAGAATTCCCCCATTTaGGGGAAATGCATATTTCCTGCTCCTGGTGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VTHISSRENSPI*GKCIFPAPGVS Trigger: GGAAACACCAGGAGCAGGAAATATGCATTTCCCCCAAATGGGGGAATTCTCACGGGATGAGATATGGGTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS CAA 90 bp | ATAATCTCTCAGGATCCAGTCTTGCTACAGTCTTCTCCCAGATGCTaGCCTGATCCCAGTGTGCACCGAGCTTCTTGTTTCTGTGCACTT | + |
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Preference number: 6 (lower is better) Translates to: IISQDPVLLQSSPRC*PDPSVHRASCFCAL Trigger: AAGTGCACAGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGAGATTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669101.1 |
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| CDS CAA 90 bp | AGCGATGCATTGTCTTGCGATGTAATAATCTCTCAGGATCCAGTCTaGCTACAGTCTTCTCCCAGATGCTTGCCTGATCCCAGTGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: SDALSCDVIISQDPV*LQSSPRCLPDPSVH Trigger: GTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGAGATTATTACATCGCAAGACAATGCATCGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669101.1 |
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| CDS GCA 72 bp | GCCTCTGAACTCTGTATATTTCTCAGGATCCAGTCTTaGTACAGTCTTCTCCCAGATGCTTGCCTGATCCCA | + |
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Preference number: 6 (lower is better) Translates to: ASELCIFLRIQS*YSLLPDACLIP Trigger: TGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGAAATATACAGAGTTCAGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654877.1 ENST00000654909.1 ENST00000657208.1 ENST00000671647.1 |
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| CDS CAA 90 bp | TATATTTCTCAGGATCCAGTCTTGCTACAGTCTTCTCCCAGATGCTaGCCTGATCCCAGTGTGCACCGAGCTTCTTGTTTCTGTGCACTT | + |
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Preference number: 6 (lower is better) Translates to: YISQDPVLLQSSPRC*PDPSVHRASCFCAL Trigger: AAGTGCACAGAAACAAGAAGCTCGGTGCACACTGGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGAAATATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654877.1 ENST00000654909.1 ENST00000657208.1 ENST00000671647.1 |
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| CDS CAA 90 bp | GTGCACCGAGCTTCTTGTTTCTGTGCACTTCCTGATTCTTGCCGCTaGCATTGTACTGTTTTGACCAGTCTTGCAAACCGTAGTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: VHRASCFCALPDSCR*HCTVLTSLANRSSH Trigger: ATGAGAACTACGGTTTGCAAGACTGGTCAAAACAGTACAATGCAAGCGGCAAGAATCAGGAAGTGCACAGAAACAAGAAGCTCGGTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000439184.1 ENST00000654877.1 ENST00000654909.1 ENST00000661719.1 ENST00000666308.1 ENST00000669101.1 ENST00000669112.1 ENST00000669113.1 ENST00000671647.1 |
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| CDS CAA 90 bp | CCCTTTCCTTCCCATTCGCTTTGTTATCCTTGCTGGAGCGATGCATaGTCTTGCGATGTAATAATCTCTCAGGATCCAGTCTTGCTACAG | + |
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Preference number: 6 (lower is better) Translates to: PFPSHSLCYPCWSDA*SCDVIISQDPVLLQ Trigger: CTGTAGCAAGACTGGATCCTGAGAGATTATTACATCGCAAGACAATGCATCGCTCCAGCAAGGATAACAAAGCGAATGGGAAGGAAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669101.1 |
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| CDS TCA 72 bp | GTGGTTCTGAGCCCATTAAAATTCATGTTCAGAGCCTaGTGGATCACATGGGAACTGCTCAGGATCCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: VVLSPLKFMFRA*WITWELLRIQS Trigger: AGACTGGATCCTGAGCAGTTCCCATGTGATCCATCAGGCTCTGAACATGAATTTTAATGGGCTCAGAACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439184.1 |
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| CDS CCA 72 bp | CTCTTACGTAAAGGGTATGCATTAATGCAACACTTGTaGCCTCTCTCCATCTTTTGGCTCACTCCTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LLRKGYALMQHL*PLSIFWLTPGR Trigger: CCTTCCAGGAGTGAGCCAAAAGATGGAGAGAGGCCACAAGTGTTGCATTAATGCATACCCTTTACGTAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS CCA 72 bp | GAACTGGAAAGCCTTTGTGTAACTGAAGGGTTTCCGTaGGTTCCAGATTCTGAGTTTGTCCCAGAAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: ELESLCVTEGFP*VPDSEFVPEAK Trigger: TTTGGCTTCTGGGACAAACTCAGAATCTGGAACCCACGGAAACCCTTCAGTTACACAAAGGCTTTCCAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660112.1 ENST00000671647.1 |
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| CDS CCA 72 bp | TGCACAAGTGGAAGTGGAGATTTCAGCGAGGTGACTTaGCCAGAGCAGCAATTTAGGAAACTTCAAAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: CTSGSGDFSEVT*PEQQFRKLQRV Trigger: AACCCTTTGAAGTTTCCTAAATTGCTGCTCTGGCCAAGTCACCTCGCTGAAATCTCCACTTCCACTTGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669113.1 |
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| CDS CAA 72 bp | TTTTGTAATCACTCTGGCAGCTGTGTAGAGAGTGGCTaGGTAGGTTGCACAAGTGGAAGTGGAGATTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: FCNHSGSCVESG*VGCTSGSGDFS Trigger: GCTGAAATCTCCACTTCCACTTGTGCAACCTACCAAGCCACTCTCTACACAGCTGCCAGAGTGATTACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000654877.1 ENST00000654909.1 ENST00000657163.1 ENST00000657208.1 ENST00000660112.1 ENST00000661719.1 ENST00000661826.1 ENST00000669101.1 ENST00000669112.1 ENST00000669113.1 ENST00000671647.1 |
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| CDS CAA 72 bp | TTGTCTTGCGATGTAATAATCTCTCAGGATCCAGTCTaGCTACAGTCTTCTCCCAGATGCTTGCCTGATCCC | + |
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Preference number: 6 (lower is better) Translates to: LSCDVIISQDPV*LQSSPRCLPDP Trigger: GGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGAGATTATTACATCGCAAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669101.1 |
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| CDS CAA 90 bp | TCCTTCCCATTCGCTTTGTTATCCTTGCTGGAGCGATGCATTGTCTaGCGATGTAATAATCTCTCAGGATCCAGTCTTGCTACAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SFPFALLSLLERCIV*RCNNLSGSSLATVF Trigger: GAAGACTGTAGCAAGACTGGATCCTGAGAGATTATTACATCGCAAGACAATGCATCGCTCCAGCAAGGATAACAAAGCGAATGGGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669101.1 |
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| CDS GCA 72 bp | TCCTTCCCATTCGCTTTGTTATCCTTGCTGGAGCGATaGATTGTCTTGCGATGTAATAATCTCTCAGGATCC | + |
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Preference number: 6 (lower is better) Translates to: SFPFALLSLLER*IVLRCNNLSGS Trigger: GGATCCTGAGAGATTATTACATCGCAAGACAATGCATCGCTCCAGCAAGGATAACAAAGCGAATGGGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669101.1 |
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| CDS CAA 72 bp | GCTTCTTGTTTCTGTGCACTTCCTGATTCTTGCCGCTaGCATTGTACTGTTTTGACCAGTCTTGCAAACCGT | + |
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Preference number: 6 (lower is better) Translates to: ASCFCALPDSCR*HCTVLTSLANR Trigger: ACGGTTTGCAAGACTGGTCAAAACAGTACAATGCAAGCGGCAAGAATCAGGAAGTGCACAGAAACAAGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000439184.1 ENST00000654877.1 ENST00000654909.1 ENST00000661719.1 ENST00000666308.1 ENST00000669101.1 ENST00000669112.1 ENST00000669113.1 ENST00000671647.1 |
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| CDS CAA 72 bp | TTGCACAAGTGGAAGTGGAGATTTCAGCGAGGTGACTaGGCCAGAGCAGCACTGATAAGAAAAATACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LHKWKWRFQRGD*ARAALIRKILS Trigger: AGAGAGTATTTTTCTTATCAGTGCTGCTCTGGCCAAGTCACCTCGCTGAAATCTCCACTTCCACTTGTGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654877.1 |
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| CDS CAA 72 bp | TTCCTCTTACGTAAAGGGTATGCATTAATGCAACACTaGTGGCCTCTCTCCATCTTTTGGCTCACTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: FLLRKGYALMQH*WPLSIFWLTPG Trigger: TCCAGGAGTGAGCCAAAAGATGGAGAGAGGCCACAAGTGTTGCATTAATGCATACCCTTTACGTAAGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS CAA 72 bp | TGCAATATTCAATTGAAACACTCTCAGGATCCAGTCTaGCTACAGTCTTCTCCCAGATGCTTGCCTGATCCC | + |
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Preference number: 6 (lower is better) Translates to: CNIQLKHSQDPV*LQSSPRCLPDP Trigger: GGGATCAGGCAAGCATCTGGGAGAAGACTGTAGCAAGACTGGATCCTGAGAGTGTTTCAATTGAATATTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000669112.1 ENST00000669113.1 |
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| CDS CAA 72 bp | TCCCATTCGCTTTGTTATCCTTGCTGGAGCGATGCATaGTCTTGCGATGTAATAATCTCTCAGGATCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SHSLCYPCWSDA*SCDVIISQDPV Trigger: GACTGGATCCTGAGAGATTATTACATCGCAAGACAATGCATCGCTCCAGCAAGGATAACAAAGCGAATGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669101.1 |
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| CDS GCA 72 bp | TCGCTTTGTTATCCTTGCTGGAGCGATGCATTGTCTTaGGATGTAATAATCTCTCAGGATCCAGTCTTGCTA | + |
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Preference number: 6 (lower is better) Translates to: SLCYPCWSDALS*DVIISQDPVLL Trigger: TAGCAAGACTGGATCCTGAGAGATTATTACATCGCAAGACAATGCATCGCTCCAGCAAGGATAACAAAGCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669101.1 |
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| CDS CCA 72 bp | TTCCCCCATTTGGGGGAAATGCATATTTCCTGCTCCTaGTGTTTCCTCTTACGTAAAGGGTATGCATTAATG | + |
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Preference number: 6 (lower is better) Translates to: FPHLGEMHISCS*CFLLRKGYALM Trigger: CATTAATGCATACCCTTTACGTAAGAGGAAACACCAGGAGCAGGAAATATGCATTTCCCCCAAATGGGGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS CAA 72 bp | GACAGTGCTGAAGCAGTCAGTTCATTCAAACAGCCTTaGAATTCAGAGTGCCTCTTTCTCTTGGGAGTACAT | + |
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Preference number: 6 (lower is better) Translates to: DSAEAVSSFKQP*NSECLFLLGVH Trigger: ATGTACTCCCAAGAGAAAGAGGCACTCTGAATTCAAAGGCTGTTTGAATGAACTGACTGCTTCAGCACTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669101.1 |
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| CDS TCA 72 bp | TCACCTTGCATTATATCAGCAAAGCTTTTGAGTTCCTaGAGTGTACTAGGGCCCGTAATAGAGACTGAGACT | + |
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Preference number: 6 (lower is better) Translates to: SPCIISAKLLSS*SVLGPVIETET Trigger: AGTCTCAGTCTCTATTACGGGCCCTAGTACACTTCAGGAACTCAAAAGCTTTGCTGATATAATGCAAGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000654877.1 ENST00000654909.1 ENST00000661719.1 ENST00000666308.1 ENST00000669101.1 ENST00000669112.1 ENST00000669113.1 ENST00000671647.1 |
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| CDS TCA 72 bp | GTGGTTCTGAGCCCATTAAAATTCATGTTCAGAGCCTaGTGGATCACATGGGAACTGCTGTCAGATAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: VVLSPLKFMFRA*WITWELLSDKR Trigger: TCTTTTATCTGACAGCAGTTCCCATGTGATCCATCAGGCTCTGAACATGAATTTTAATGGGCTCAGAACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000654877.1 ENST00000654909.1 ENST00000661826.1 ENST00000671647.1 |
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| CDS TCA 72 bp | GTGGTTCTGAGCCCATTAAAATTCATGTTCAGAGCCTaGTGGATCACATGGGAACTGTCAGATAAAAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: VVLSPLKFMFRA*WITWELSDKRD Trigger: ATCTCTTTTATCTGACAGTTCCCATGTGATCCATCAGGCTCTGAACATGAATTTTAATGGGCTCAGAACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657208.1 |
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| CDS CAA 72 bp | GACAGTGCTGAAGCAGTCAGTTCATTCAAACAGCCTTaGAATTCAGAGTGCCTCTTTCATTTAGGAAACTTC | + |
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Preference number: 6 (lower is better) Translates to: DSAEAVSSFKQP*NSECLFHLGNF Trigger: GAAGTTTCCTAAATGAAAGAGGCACTCTGAATTCAAAGGCTGTTTGAATGAACTGACTGCTTCAGCACTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000439184.1 ENST00000654909.1 ENST00000657163.1 ENST00000657208.1 ENST00000660112.1 ENST00000661826.1 ENST00000669112.1 ENST00000671647.1 |
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| CDS CAA 90 bp | GTCAGTTCATTCAAACAGCCTTTGAATTCAGAGTGCCTCTTTCTCTaGGGAGTACATAAAACCTTTCAGAAGACATGCAAACACAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: VSSFKQPLNSECLFL*GVHKTFQKTCKHKL Trigger: CAGTTTGTGTTTGCATGTCTTCTGAAAGGTTTTATGTACTCCCAAGAGAAAGAGGCACTCTGAATTCAAAGGCTGTTTGAATGAACTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669101.1 |
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| CDS CAA 90 bp | TATCTACAAGACAGTGCTGAAGCAGTCAGTTCATTCAAACAGCCTTaGAATTCAGAGTGCCTCTTTCTCTTGGGAGTACATAAAACCTTT | + |
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Preference number: 6 (lower is better) Translates to: YLQDSAEAVSSFKQP*NSECLFLLGVHKTF Trigger: AAAGGTTTTATGTACTCCCAAGAGAAAGAGGCACTCTGAATTCAAAGGCTGTTTGAATGAACTGACTGCTTCAGCACTGTCTTGTAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669101.1 |
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| CDS TCA 72 bp | CCTTCGTTTTTCCTGCTGCTTTCTCTAATTCCCGTTTaGTGCCTTCAGAAATCAAGATTATCCCAAGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: PSFFLLLSLIPV*CLQKSRLSQVF Trigger: AAAGACTTGGGATAATCTTGATTTCTGAAGGCATCAAACGGGAATTAGAGAAAGCAGCAGGAAAAACGAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000439184.1 ENST00000654877.1 ENST00000654909.1 ENST00000661719.1 ENST00000666308.1 ENST00000669101.1 ENST00000669112.1 ENST00000669113.1 ENST00000671647.1 |
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| CDS TCA 72 bp | GAAGAGGTTCCATTTGACGCAATATATATTTATCTGTaGCCCATATCTCATCCCGTGAGAATTCCCCCATTT | + |
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Preference number: 6 (lower is better) Translates to: EEVPFDAIYIYL*PISHPVRIPPF Trigger: AAATGGGGGAATTCTCACGGGATGAGATATGGGTCACAGATAAATATATATTGCGTCAAATGGAACCTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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| CDS CAA 72 bp | TTCAAACAGCCTTTGAATTCAGAGTGCCTCTTTCTCTaGGGAGTACATAAAACCTTTCAGAAGACATGCAAA | + |
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Preference number: 6 (lower is better) Translates to: FKQPLNSECLFL*GVHKTFQKTCK Trigger: TTTGCATGTCTTCTGAAAGGTTTTATGTACTCCCAAGAGAAAGAGGCACTCTGAATTCAAAGGCTGTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669101.1 |
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| CDS CAA 90 bp | TTTTTGCTACTTCCACCAAAGTCAGCTAAATCAAGGATGGTTCATTaGAAGAGGTTCCATTTGACGCAATATATATTTATCTGTGACCCA | + |
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Preference number: 6 (lower is better) Translates to: FLLLPPKSAKSRMVH*KRFHLTQYIFICDP Trigger: TGGGTCACAGATAAATATATATTGCGTCAAATGGAACCTCTTCAAATGAACCATCCTTGATTTAGCTGACTTTGGTGGAAGTAGCAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666308.1 |
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