Pregenerated sensors for LINC01677 (Homo sapiens)
Ensembl gene IDs: ENSG00000233047Ensembl transcript IDs: ENST00000417385.2, ENST00000429080.1, ENST00000446693.5, ENST00000635342.1, ENST00000635636.1, ENST00000635713.1, ENST00000656436.1
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTAGCTGGAGCCTTCCTTCTGCCTGTGGCCTTTTTCCAATTCCTCTaGCACCTCTCCCTAAGGACCCAGTGTTTGGTTGTCTCCCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: LAGAFLLPVAFFQFL*HLSLRTQCLVVSQA Trigger: GGCCTGGGAGACAACCAAACACTGGGTCCTTAGGGAGAGGTGCCAGAGGAATTGGAAAAAGGCCACAGGCAGAAGGAAGGCTCCAGCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000417385.2 ENST00000446693.5 ENST00000635342.1 ENST00000635636.1 ENST00000635713.1 ENST00000656436.1 |
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| CDS GCA 90 bp | GCTTCCTTCTGGAACAGGATGTCCTGCCAAACTTCAGTCCAGCAATaGCAATTATCCCCAGGGCATATAACTCAGAGGGGAGTGCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: ASFWNRMSCQTSVQQ*QLSPGHITQRGVLS Trigger: AGAAAGCACTCCCCTCTGAGTTATATGCCCTGGGGATAATTGGCATTGCTGGACTGAAGTTTGGCAGGACATCCTGTTCCAGAAGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635636.1 |
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| CDS GCA 90 bp | CAGCAGGCTGTACTCTGTTCTGCTTCCTTCTGGAACAGGATGTCCTaGCAAACTTCAGTCCAGCAATGCCAATTATCCCCAGGGCATATA | + |
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Preference number: 5 (lower is better) Translates to: QQAVLCSASFWNRMS*QTSVQQCQLSPGHI Trigger: TATATGCCCTGGGGATAATTGGCATTGCTGGACTGAAGTTTGGCAGGACATCCTGTTCCAGAAGGAAGCAGAACAGAGTACAGCCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635636.1 |
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| CDS CCA 90 bp | TCTCCCAGGCCCTGCAGGAGCAATCTGCTTCCTTCAAAGAGTCTGTaGATTCTCTCATCTTTCCTCATATGTTCCTGCAGTAGTTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SPRPCRSNLLPSKSL*ILSSFLICSCSSSG Trigger: CCCAGAACTACTGCAGGAACATATGAGGAAAGATGAGAGAATCCACAGACTCTTTGAAGGAAGCAGATTGCTCCTGCAGGGCCTGGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446693.5 ENST00000635636.1 |
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| CDS GCA 90 bp | AAGGACCCAGTGTTTGGTTGTCTCCCAGGCCCTGCAGGAGCAATCTaGTTCCTTCAAAGAGTCTGTGGATTCTCTCATCTTTCCTCATAT | + |
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Preference number: 5 (lower is better) Translates to: KDPVFGCLPGPAGAI*FLQRVCGFSHLSSY Trigger: ATATGAGGAAAGATGAGAGAATCCACAGACTCTTTGAAGGAAGCAGATTGCTCCTGCAGGGCCTGGGAGACAACCAAACACTGGGTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000417385.2 ENST00000446693.5 ENST00000635342.1 ENST00000635636.1 ENST00000635713.1 ENST00000656436.1 |
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| CDS CCA 90 bp | TCTGTGGTTTCGGGTCATCCAAATGATGGGTCAATCAAGTTTAGCTaGAGCCTTCCTTCTGCCTGTGGCCTTTTTCCAATTCCTCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: SVVSGHPNDGSIKFS*SLPSACGLFPIPLA Trigger: TGCCAGAGGAATTGGAAAAAGGCCACAGGCAGAAGGAAGGCTCCAGCTAAACTTGATTGACCCATCATTTGGATGACCCGAAACCACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000417385.2 ENST00000446693.5 ENST00000635342.1 ENST00000635713.1 |
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| CDS TCA 90 bp | AGTGGAAATAATCTGATTCTGTTCCATGATACTGGGGGCTTCAGCTaGAAAAGCTTGCGGGCTGAAAGCAGGAATCCTCTGAAGGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: SGNNLILFHDTGGFS*KSLRAESRNPLKAC Trigger: GCAAGCCTTCAGAGGATTCCTGCTTTCAGCCCGCAAGCTTTTTCAGCTGAAGCCCCCAGTATCATGGAACAGAATCAGATTATTTCCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000417385.2 ENST00000635636.1 |
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| CDS CCA 90 bp | TCTCCCAGGCCCTGCAGGAGCAATCTGCTTCCTTCAAAGAGTCTGTaGATTCTCTCATCTTTCCTCATATGTTCCTGCAGTAGTTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: SPRPCRSNLLPSKSL*ILSSFLICSCSSLY Trigger: GTACAAACTACTGCAGGAACATATGAGGAAAGATGAGAGAATCCACAGACTCTTTGAAGGAAGCAGATTGCTCCTGCAGGGCCTGGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000417385.2 ENST00000635342.1 ENST00000635713.1 ENST00000656436.1 |
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| CDS CCA 90 bp | CAGCAGTGCAATGAGGAGCATGCACAGGAGAGATTCTATTTTCCTTaGATGGCTTTCTTGAGCCTTGGAAATCTGGCTCACCAGGAATTC | + |
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Preference number: 5 (lower is better) Translates to: QQCNEEHAQERFYFP*MAFLSLGNLAHQEF Trigger: GAATTCCTGGTGAGCCAGATTTCCAAGGCTCAAGAAAGCCATCCAAGGAAAATAGAATCTCTCCTGTGCATGCTCCTCATTGCACTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635636.1 |
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| CDS GCA 90 bp | TCACAATGTGAGTCTCCACAAGCTACTCTCTGTCTGAGTGGGAGCTaGAATTTAGTCCTGCTTCCTATCCACCATTTGCCTATTACTAAT | + |
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Preference number: 5 (lower is better) Translates to: SQCESPQATLCLSGS*NLVLLPIHHLPITN Trigger: ATTAGTAATAGGCAAATGGTGGATAGGAAGCAGGACTAAATTGCAGCTCCCACTCAGACAGAGAGTAGCTTGTGGAGACTCACATTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446693.5 ENST00000635636.1 |
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| CDS GCA 90 bp | CCTTCAAAGAGTCTGTGGATTCTCTCATCTTTCCTCATATGTTCCTaGAGTAGTTCTGGGAGCAAAAGTTCACAATGTGAGTCTCCACAA | + |
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Preference number: 5 (lower is better) Translates to: PSKSLWILSSFLICS*SSSGSKSSQCESPQ Trigger: TTGTGGAGACTCACATTGTGAACTTTTGCTCCCAGAACTACTGCAGGAACATATGAGGAAAGATGAGAGAATCCACAGACTCTTTGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446693.5 ENST00000635636.1 |
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| CDS TCA 90 bp | TTTCTTGCTTGTAGCTCTCAGAATAATTGTAGAATATGCTGCGAATaGAGCATCCTGAGACAAAAAGGAACTGTCCACAGCAGGCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: FLACSSQNNCRICCE*SILRQKGTVHSRLY Trigger: GTACAGCCTGCTGTGGACAGTTCCTTTTTGTCTCAGGATGCTTCATTCGCAGCATATTCTACAATTATTCTGAGAGCTACAAGCAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635636.1 ENST00000635713.1 |
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| CDS TCA 90 bp | TTTGTTCCATTCTTCTATTGCATCTGTGGTTTCGGGTCATCCAAATaGTGGGTCAATTACATGTGTGGCTTTGCAGAAGTTTCTTTATTT | + |
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Preference number: 5 (lower is better) Translates to: FVPFFYCICGFGSSK*WVNYMCGFAEVSLF Trigger: AAATAAAGAAACTTCTGCAAAGCCACACATGTAATTGACCCATCATTTGGATGACCCGAAACCACAGATGCAATAGAAGAATGGAACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429080.1 |
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| CDS CAA 72 bp | CAATTCCTCTGGCACCTCTCCCTAAGGACCCAGTGTTaGGTTGTCTCCCAGGCCCTGCAGGAGCAATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: QFLWHLSLRTQC*VVSQALQEQSA Trigger: AGCAGATTGCTCCTGCAGGGCCTGGGAGACAACCAAACACTGGGTCCTTAGGGAGAGGTGCCAGAGGAATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000417385.2 ENST00000446693.5 ENST00000635342.1 ENST00000635636.1 ENST00000635713.1 ENST00000656436.1 |
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| CDS CAA 90 bp | GCCTTTTTCCAATTCCTCTGGCACCTCTCCCTAAGGACCCAGTGTTaGGTTGTCTCCCAGGCCCTGCAGGAGCAATCTGCTTCCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: AFFQFLWHLSLRTQC*VVSQALQEQSASFK Trigger: TTTGAAGGAAGCAGATTGCTCCTGCAGGGCCTGGGAGACAACCAAACACTGGGTCCTTAGGGAGAGGTGCCAGAGGAATTGGAAAAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000417385.2 ENST00000446693.5 ENST00000635342.1 ENST00000635636.1 ENST00000635713.1 ENST00000656436.1 |
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| CDS GCA 72 bp | CAGAGGGGAGTGCTTTCTGGGGTCCTTCAGCAGCAGTaGAATGAGGAGCATGCACAGGAGAGATTCTATTTT | + |
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Preference number: 6 (lower is better) Translates to: QRGVLSGVLQQQ*NEEHAQERFYF Trigger: AAAATAGAATCTCTCCTGTGCATGCTCCTCATTGCACTGCTGCTGAAGGACCCCAGAAAGCACTCCCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635636.1 |
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| CDS CCA 72 bp | TGTCCACAGCAGGCTGTACTCTGTTCTGCTTCCTTCTaGAACAGGATGTCCTGCCAAACTTCAGTCCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: CPQQAVLCSASF*NRMSCQTSVQQ Trigger: TTGCTGGACTGAAGTTTGGCAGGACATCCTGTTCCAGAAGGAAGCAGAACAGAGTACAGCCTGCTGTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635636.1 |
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| CDS CAA 72 bp | TCTGGCTCACCAGGAATTCTAGGCTTCTGTTGTCCCTaGCTTCCTATATGCGCTATCCCCTCTCTGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: SGSPGILGFCCP*LPICAIPSLDL Trigger: CAAGTCCAGAGAGGGGATAGCGCATATAGGAAGCAAGGGACAACAGAAGCCTAGAATTCCTGGTGAGCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635636.1 |
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| CDS GCA 72 bp | TGGAACAGGATGTCCTGCCAAACTTCAGTCCAGCAATaGCAATTATCCCCAGGGCATATAACTCAGAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: WNRMSCQTSVQQ*QLSPGHITQRG Trigger: TCCCCTCTGAGTTATATGCCCTGGGGATAATTGGCATTGCTGGACTGAAGTTTGGCAGGACATCCTGTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635636.1 |
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| CDS GCA 72 bp | GTACTCTGTTCTGCTTCCTTCTGGAACAGGATGTCCTaGCAAACTTCAGTCCAGCAATGCCAATTATCCCCA | + |
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Preference number: 6 (lower is better) Translates to: VLCSASFWNRMS*QTSVQQCQLSP Trigger: TGGGGATAATTGGCATTGCTGGACTGAAGTTTGGCAGGACATCCTGTTCCAGAAGGAAGCAGAACAGAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635636.1 |
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| CDS GCA 72 bp | AAAAAGGAACTGTCCACAGCAGGCTGTACTCTGTTCTaGTTCCTTCTGGAACAGGATGTCCTGCCAAACTTC | + |
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Preference number: 6 (lower is better) Translates to: KKELSTAGCTLF*FLLEQDVLPNF Trigger: GAAGTTTGGCAGGACATCCTGTTCCAGAAGGAAGCAGAACAGAGTACAGCCTGCTGTGGACAGTTCCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635636.1 ENST00000635713.1 |
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| CDS GCA 72 bp | GAGACTGTGGGAGACTTCCCTTCACTTTGCCAGCTATaGCTATTAGAATTCCTATCTGTCCCCAGAAATCAG | + |
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Preference number: 6 (lower is better) Translates to: ETVGDFPSLCQL*LLEFLSVPRNQ Trigger: CTGATTTCTGGGGACAGATAGGAATTCTAATAGGCATAGCTGGCAAAGTGAAGGGAAGTCTCCCACAGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446693.5 ENST00000635636.1 |
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| CDS CCA 72 bp | TCGGGTCATCCAAATGATGGGTCAATCAAGTTTAGCTaGAGCCTTCCTTCTGCCTGTGGCCTTTTTCCAATT | + |
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Preference number: 6 (lower is better) Translates to: SGHPNDGSIKFS*SLPSACGLFPI Trigger: AATTGGAAAAAGGCCACAGGCAGAAGGAAGGCTCCAGCTAAACTTGATTGACCCATCATTTGGATGACCCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000417385.2 ENST00000446693.5 ENST00000635342.1 ENST00000635713.1 |
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| CDS CCA 72 bp | AATGAGGAGCATGCACAGGAGAGATTCTATTTTCCTTaGATGGCTTTCTTGAGCCTTGGAAATCTGGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: NEEHAQERFYFP*MAFLSLGNLAH Trigger: GTGAGCCAGATTTCCAAGGCTCAAGAAAGCCATCCAAGGAAAATAGAATCTCTCCTGTGCATGCTCCTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635636.1 |
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| CDS CCA 72 bp | GAGATTCTATTTTCCTTGGATGGCTTTCTTGAGCCTTaGAAATCTGGCTCACCAGGAATTCTAGGCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: EILFSLDGFLEP*KSGSPGILGFC Trigger: ACAGAAGCCTAGAATTCCTGGTGAGCCAGATTTCCAAGGCTCAAGAAAGCCATCCAAGGAAAATAGAATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635636.1 |
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| CDS CAA 90 bp | TCCCAACTAGAAGGTAGATTCCTTGAGAGCATTTATTTGACTCCTTaGTTTCCCAAAACCAGTCCCAGAATCTGTCACAGAGCAGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: SQLEGRFLESIYLTP*FPKTSPRICHRAGV Trigger: AACACCTGCTCTGTGACAGATTCTGGGACTGGTTTTGGGAAACAAAGGAGTCAAATAAATGCTCTCAAGGAATCTACCTTCTAGTTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635713.1 |
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| CDS GCA 72 bp | AGTCTGTGGATTCTCTCATCTTTCCTCATATGTTCCTaGAGTAGTTCTGGGAGCAAAAGTTCACAATGTGAG | + |
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Preference number: 6 (lower is better) Translates to: SLWILSSFLICS*SSSGSKSSQCE Trigger: CTCACATTGTGAACTTTTGCTCCCAGAACTACTGCAGGAACATATGAGGAAAGATGAGAGAATCCACAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446693.5 ENST00000635636.1 |
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| CDS TCA 72 bp | TGTAGCTCTCAGAATAATTGTAGAATATGCTGCGAATaGAGCATCCTGAGACAAAAAGGAACTGTCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: CSSQNNCRICCE*SILRQKGTVHS Trigger: GCTGTGGACAGTTCCTTTTTGTCTCAGGATGCTTCATTCGCAGCATATTCTACAATTATTCTGAGAGCTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635636.1 ENST00000635713.1 |
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| CDS GCA 72 bp | TATGAACATTCACATACAAGTCTTTGGATGGACATCTaGTTTATCTTCTCTATGCGCTATCCCCTCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: YEHSHTSLWMDI*FIFSMRYPLSG Trigger: TCCAGAGAGGGGATAGCGCATAGAGAAGATAAAGCAGATGTCCATCCAAAGACTTGTATGTGAATGTTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000417385.2 ENST00000429080.1 ENST00000635342.1 ENST00000656436.1 |
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| CDS CAA 72 bp | GAAGGTAGATTCCTTGAGAGCATTTATTTGACTCCTTaGTTTCCCAAAACCAGTCCCAGAATCTGTCACAGA | + |
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Preference number: 6 (lower is better) Translates to: EGRFLESIYLTP*FPKTSPRICHR Trigger: TCTGTGACAGATTCTGGGACTGGTTTTGGGAAACAAAGGAGTCAAATAAATGCTCTCAAGGAATCTACCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635713.1 |
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| CDS CAA 90 bp | GCACTGATTCAAGATTGTGTCAACACTTTATCCCAGAATGCAGACTaGACCTGCCATATAGTAGATAAATACTCAGTAGAAATTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: ALIQDCVNTLSQNAD*TCHIVDKYSVEIGG Trigger: GCCACCAATTTCTACTGAGTATTTATCTACTATATGGCAGGTCAAGTCTGCATTCTGGGATAAAGTGTTGACACAATCTTGAATCAGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000417385.2 ENST00000429080.1 ENST00000635636.1 ENST00000656436.1 |
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| CDS CCA 72 bp | AAAGTTGCTATGAACATTCACATACAAGTCTTTGGATaGACATCTGCTTTATCTTCTCTATGCGCTATCCCC | + |
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Preference number: 6 (lower is better) Translates to: KVAMNIHIQVFG*TSALSSLCAIP Trigger: GGGGATAGCGCATAGAGAAGATAAAGCAGATGTCCATCCAAAGACTTGTATGTGAATGTTCATAGCAACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000417385.2 ENST00000429080.1 ENST00000635342.1 ENST00000656436.1 |
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| CDS GCA 72 bp | CATATATCCTCTACATTCTTCTTCTACAACAGTTTATaGACATTACTCTTAGCTAACCCAGTTCTCCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: HISSTFFFYNSL*TLLLANPVLPR Trigger: ACGAGGGAGAACTGGGTTAGCTAAGAGTAATGTGCATAAACTGTTGTAGAAGAAGAATGTAGAGGATATATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635713.1 |
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| CDS CCA 72 bp | TTAATGGAACTTTGTTTTTCAAGTAATATGAGACTGTaGGAGACTTCCCTTCACTTTGCCAGCTATGCCTAT | + |
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Preference number: 6 (lower is better) Translates to: LMELCFSSNMRL*ETSLHFASYAY Trigger: ATAGGCATAGCTGGCAAAGTGAAGGGAAGTCTCCCACAGTCTCATATTACTTGAAAAACAAAGTTCCATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000446693.5 ENST00000635636.1 |
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| CDS TCA 72 bp | ACTCTTCTTCAGCTCTCTTATCTTTTGTTGCCTACTTaGATAGTTCATTCCTTTTTATTGCTGGGTATCCCA | + |
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Preference number: 6 (lower is better) Translates to: TLLQLSYLLLPT*IVHSFLLLGIP Trigger: TGGGATACCCAGCAATAAAAAGGAATGAACTATTCAAGTAGGCAACAAAAGATAAGAGAGCTGAAGAAGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000417385.2 ENST00000635342.1 ENST00000656436.1 |
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| CDS CCA 72 bp | AATGTACAAATTTGTTCCATTCTTCTATTGCATCTGTaGTTTCGGGTCATCCAAATGATGGGTCAATCAAGT | + |
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Preference number: 6 (lower is better) Translates to: NVQICSILLLHL*FRVIQMMGQSS Trigger: ACTTGATTGACCCATCATTTGGATGACCCGAAACCACAGATGCAATAGAAGAATGGAACAAATTTGTACATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000417385.2 ENST00000446693.5 ENST00000635342.1 ENST00000635713.1 |
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| CDS CAA 72 bp | CAAGATTGTGTCAACACTTTATCCCAGAATGCAGACTaGACCTGCCATATAGTAGATAAATACTCAGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: QDCVNTLSQNAD*TCHIVDKYSVE Trigger: TTCTACTGAGTATTTATCTACTATATGGCAGGTCAAGTCTGCATTCTGGGATAAAGTGTTGACACAATCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000417385.2 ENST00000429080.1 ENST00000635636.1 ENST00000656436.1 |
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| CDS CCA 72 bp | AATGTACAAATTTGTTCCATTCTTCTATTGCATCTGTaGTTTCGGGTCATCCAAATGATGGGTCAATTACAT | + |
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Preference number: 6 (lower is better) Translates to: NVQICSILLLHL*FRVIQMMGQLH Trigger: ATGTAATTGACCCATCATTTGGATGACCCGAAACCACAGATGCAATAGAAGAATGGAACAAATTTGTACATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429080.1 |
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