Pregenerated sensors for LINC01676 (Homo sapiens)
Ensembl gene IDs: ENSG00000230768Ensembl transcript IDs: ENST00000420901.5, ENST00000435253.5, ENST00000594455.5, ENST00000595309.6, ENST00000597635.6, ENST00000597752.5, ENST00000600656.6, ENST00000610126.2, ENST00000623043.2, ENST00000623447.3, ENST00000624083.3, ENST00000624229.3, ENST00000624780.3, ENST00000624898.4, ENST00000652819.1, ENST00000654698.1, ENST00000657035.1, ENST00000659994.1, ENST00000661746.1, ENST00000669135.1, ENST00000669362.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGTGGAAGTTGCAGTGAGCCGAGGTCGCGCCATTGTACTCCAGCCTaGGAGGGAAACTGTCTTTTTCCTCTGAGTGGTTCAGTTATGCAG | + |
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Preference number: 5 (lower is better) Translates to: GGSCSEPRSRHCTPA*EGNCLFPLSGSVMQ Trigger: CTGCATAACTGAACCACTCAGAGGAAAAAGACAGTTTCCCTCCCAGGCTGGAGTACAATGGCGCGACCTCGGCTCACTGCAACTTCCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000623043.2 ENST00000623447.3 ENST00000661746.1 |
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| CDS CCA 90 bp | GGCAACCTGGGGAGGGTGGAATGTCAAGTTCATTTATTTGGTTCGTaGCAATATTTAGTTCCTCAAAGATGTTGGATGAACAGCCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: GNLGRVECQVHLFGS*QYLVPQRCWMNSLS Trigger: ACTGAGGCTGTTCATCCAACATCTTTGAGGAACTAAATATTGCCACGAACCAAATAAATGAACTTGACATTCCACCCTCCCCAGGTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624229.3 |
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| CDS TCA 90 bp | ATCTACCTCATGTCTTGCTCCTCTTGCTGTCAATCACTCAGCTACTaGATGTGTCTCAACCCAACCATAAACACTCCTGTATTAGGATTC | + |
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Preference number: 5 (lower is better) Translates to: IYLMSCSSCCQSLSY*MCLNPTINTPVLGF Trigger: GAATCCTAATACAGGAGTGTTTATGGTTGGGTTGAGACACATTCAGTAGCTGAGTGATTGACAGCAAGAGGAGCAAGACATGAGGTAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435253.5 |
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| CDS CCA 90 bp | GCAAGATCAATGCATATTTCCTCAGATGTAGGAGGTGTCCTGAAATaGCAATCTGGCTATTGTCTGGAGCCTCTCACTTCTTGCAATTTT | + |
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Preference number: 5 (lower is better) Translates to: ARSMHISSDVGGVLK*QSGYCLEPLTSCNF Trigger: AAAATTGCAAGAAGTGAGAGGCTCCAGACAATAGCCAGATTGCCATTTCAGGACACCTCCTACATCTGAGGAAATATGCATTGATCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597752.5 ENST00000624083.3 |
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| CDS CCA 90 bp | GCAAGATCAATGCATATTTCCTCAGATGTAGGAGGTGTCCTGAAATaGCAATCTGAAGAGTGGAGGTGGGTAGTTCTTGTCACATGTAAA | + |
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Preference number: 5 (lower is better) Translates to: ARSMHISSDVGGVLK*QSEEWRWVVLVTCK Trigger: TTTACATGTGACAAGAACTACCCACCTCCACTCTTCAGATTGCCATTTCAGGACACCTCCTACATCTGAGGAAATATGCATTGATCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624780.3 |
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| CDS TCA 90 bp | ATTAACCTCATGTCTTGCTCCTCTTGCTGTCAATCACTCAGCTACTaGATGTGTCTCAACCCAACCATAAACACTCCTGTATTAGGATTC | + |
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Preference number: 5 (lower is better) Translates to: INLMSCSSCCQSLSY*MCLNPTINTPVLGF Trigger: GAATCCTAATACAGGAGTGTTTATGGTTGGGTTGAGACACATTCAGTAGCTGAGTGATTGACAGCAAGAGGAGCAAGACATGAGGTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000595309.6 ENST00000597635.6 ENST00000600656.6 ENST00000654698.1 |
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| CDS GCA 72 bp | GAGGTGGGAGAATTGCTTGAACTGGGAGGTGGAAGTTaGAGTGAGCCGAGGTCGCGCCATTGTACTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: EVGELLELGGGS*SEPRSRHCTPA Trigger: GGCTGGAGTACAATGGCGCGACCTCGGCTCACTGCAACTTCCACCTCCCAGTTCAAGCAATTCTCCCACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000435253.5 ENST00000595309.6 ENST00000597752.5 ENST00000610126.2 ENST00000623043.2 ENST00000623447.3 ENST00000624229.3 ENST00000654698.1 ENST00000659994.1 ENST00000661746.1 ENST00000669135.1 |
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| CDS CCA 72 bp | TGCAGTGAGCCGAGGTCGCGCCATTGTACTCCAGCCTaGGAGGGAAACTGTCTTTTTCCTCTGAGTGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: CSEPRSRHCTPA*EGNCLFPLSGS Trigger: TGAACCACTCAGAGGAAAAAGACAGTTTCCCTCCCAGGCTGGAGTACAATGGCGCGACCTCGGCTCACTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000623043.2 ENST00000623447.3 ENST00000661746.1 |
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| CDS TCA 72 bp | GCAAGCCAGAGAGTGAGGAAGAGCACCTTTTTCCTCTaGGTGGTTCAGTTATGCAGACTTCTGCATTGCATA | + |
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Preference number: 6 (lower is better) Translates to: ASQRVRKSTFFL*VVQLCRLLHCI Trigger: TATGCAATGCAGAAGTCTGCATAACTGAACCACTCAGAGGAAAAAGGTGCTCTTCCTCACTCTCTGGCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000624083.3 |
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| CDS GCA 72 bp | TCCGTCTGTTGGTTTTGGGATCCTCCGGGAAAAGAATaGTTTATCTGTGCCCAATGCTTGCTTATGCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SVCWFWDPPGKE*FICAQCLLMPF Trigger: AAAGGGCATAAGCAAGCATTGGGCACAGATAAAGCATTCTTTTCCCGGAGGATCCCAAAACCAACAGACGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000435253.5 ENST00000654698.1 ENST00000661746.1 |
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| CDS TCA 72 bp | CATTGTACTCCAGCCTGGGAGGGAAACTTTTTCCTCTaGGTGGTTCAGTTATGCAGACTTCTGCATTGCATA | + |
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Preference number: 6 (lower is better) Translates to: HCTPAWEGNFFL*VVQLCRLLHCI Trigger: TATGCAATGCAGAAGTCTGCATAACTGAACCACTCAGAGGAAAAAGTTTCCCTCCCAGGCTGGAGTACAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000435253.5 ENST00000595309.6 ENST00000597752.5 ENST00000610126.2 ENST00000624229.3 ENST00000654698.1 ENST00000659994.1 ENST00000669135.1 |
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| CDS CCA 72 bp | TTCCTCAGATGTAGGAGGTGTCCTGAAATGGCAATCTaGCTATTGTCTGGAGCCTCTCACTTCTTGCAATTT | + |
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Preference number: 6 (lower is better) Translates to: FLRCRRCPEMAI*LLSGASHFLQF Trigger: AAATTGCAAGAAGTGAGAGGCTCCAGACAATAGCCAGATTGCCATTTCAGGACACCTCCTACATCTGAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597752.5 ENST00000624083.3 |
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| CDS CCA 72 bp | ATGCATATTTCCTCAGATGTAGGAGGTGTCCTGAAATaGCAATCTGGCTATTGTCTGGAGCCTCTCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: MHISSDVGGVLK*QSGYCLEPLTS Trigger: AGAAGTGAGAGGCTCCAGACAATAGCCAGATTGCCATTTCAGGACACCTCCTACATCTGAGGAAATATGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597752.5 ENST00000624083.3 |
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| CDS CAA 72 bp | ATAACTGTGTCACCAGCTCCTCATGTCTTGCTCCTCTaGCTGTCAATCACTCAGCTACTGAATGTGTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: ITVSPAPHVLLL*LSITQLLNVSQ Trigger: TTGAGACACATTCAGTAGCTGAGTGATTGACAGCAAGAGGAGCAAGACATGAGGAGCTGGTGACACAGTTAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000610126.2 ENST00000657035.1 |
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| CDS CAA 72 bp | CCTTCCATAATAACTGTGTCACCAGCTCCTCATGTCTaGCTCCTCTTGCTGTCAATCACTCAGCTACTGAAT | + |
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Preference number: 6 (lower is better) Translates to: PSIITVSPAPHV*LLLLSITQLLN Trigger: ATTCAGTAGCTGAGTGATTGACAGCAAGAGGAGCAAGACATGAGGAGCTGGTGACACAGTTATTATGGAAGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000610126.2 ENST00000657035.1 |
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| CDS CCA 72 bp | TGGATGAACAGCCTCAGTTTCTACCTGGCTATTGTCTaGAGCCTCTCACTTCTTGCAATTTTAGACTTTTCG | + |
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Preference number: 6 (lower is better) Translates to: WMNSLSFYLAIV*SLSLLAILDFS Trigger: CGAAAAGTCTAAAATTGCAAGAAGTGAGAGGCTCCAGACAATAGCCAGGTAGAAACTGAGGCTGTTCATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000624229.3 |
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| CDS GCA 72 bp | TGGCAATCTGGCTATTGTCTGGAGCCTCTCACTTCTTaGAATTTTAGACTTTTCGTAGGGTATCTCACTGTA | + |
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Preference number: 6 (lower is better) Translates to: WQSGYCLEPLTS*NFRLFVGYLTV Trigger: TACAGTGAGATACCCTACGAAAAGTCTAAAATTGCAAGAAGTGAGAGGCTCCAGACAATAGCCAGATTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000597752.5 ENST00000624083.3 |
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| CDS GCA 72 bp | GTTTTACACATGTGCCTCATCTTATTGCCTAGTAGCTaGCTAGTTTATTTTATGGTAGCAGCTCTTGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: VLHMCLILLPSS*LVYFMVAALGC Trigger: ACACCCAAGAGCTGCTACCATAAAATAAACTAGGCAGCTACTAGGCAATAAGATGAGGCACATGTGTAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000597635.6 ENST00000600656.6 ENST00000652819.1 |
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| CDS GCA 72 bp | TTTCTACCTGGCTATTGTCTGGAGCCTCTCACTTCTTaGAATTTTAGACTTTTCGTAGGGTATCTCACTGTA | + |
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Preference number: 6 (lower is better) Translates to: FLPGYCLEPLTS*NFRLFVGYLTV Trigger: TACAGTGAGATACCCTACGAAAAGTCTAAAATTGCAAGAAGTGAGAGGCTCCAGACAATAGCCAGGTAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000624229.3 |
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| CDS CAA 90 bp | AGTTCATTTATTTGGTTCGTGGCAATATTTAGTTCCTCAAAGATGTaGGATGAACAGCCTCAGTTTCTACCTGGCTATTGTCTGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSFIWFVAIFSSSKM*DEQPQFLPGYCLEP Trigger: AGGCTCCAGACAATAGCCAGGTAGAAACTGAGGCTGTTCATCCAACATCTTTGAGGAACTAAATATTGCCACGAACCAAATAAATGAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624229.3 |
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| CDS GCA 72 bp | CTCTTCACCAAGCTAAAAGCAGAAGTTTTACACATGTaGCTCATCTTATTGCCTAGTAGCTGCCTAGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: LFTKLKAEVLHM*LILLPSSCLVY Trigger: ATAAACTAGGCAGCTACTAGGCAATAAGATGAGGCACATGTGTAAAACTTCTGCTTTTAGCTTGGTGAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000597635.6 ENST00000600656.6 ENST00000652819.1 |
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| CDS CAA 72 bp | ATTTGGTTCGTGGCAATATTTAGTTCCTCAAAGATGTaGGATGAACAGCCTCAGTTTCTACCTGGCTATTGT | + |
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Preference number: 6 (lower is better) Translates to: IWFVAIFSSSKM*DEQPQFLPGYC Trigger: ACAATAGCCAGGTAGAAACTGAGGCTGTTCATCCAACATCTTTGAGGAACTAAATATTGCCACGAACCAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624229.3 |
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| CDS CAA 72 bp | GAATATAATACAAATCTACCTCATGTCTTGCTCCTCTaGCTGTCAATCACTCAGCTACTGAATGTGTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: EYNTNLPHVLLL*LSITQLLNVSQ Trigger: TTGAGACACATTCAGTAGCTGAGTGATTGACAGCAAGAGGAGCAAGACATGAGGTAGATTTGTATTATATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000435253.5 ENST00000652819.1 ENST00000659994.1 ENST00000661746.1 ENST00000669135.1 ENST00000669362.1 |
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| CDS CAA 72 bp | CCTCCGGGAAAAGAATGCTTTATCTGTGCCCAATGCTaGCTTATGCCCTTTAAATATGTAAATTTTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: PPGKECFICAQC*LMPFKYVNFDA Trigger: AGCATCAAAATTTACATATTTAAAGGGCATAAGCAAGCATTGGGCACAGATAAAGCATTCTTTTCCCGGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000435253.5 ENST00000654698.1 ENST00000661746.1 |
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| CDS CCA 72 bp | TATTGCCACAGTTTCAGCTTTCATAGTAAATTTTTATaGTCTCACACTCTCATGCAAAGCAAAGTCTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: YCHSFSFHSKFL*SHTLMQSKVCL Trigger: CAAACAGACTTTGCTTTGCATGAGAGTGTGAGACCATAAAAATTTACTATGAAAGCTGAAACTGTGGCAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594455.5 |
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| CDS TCA 72 bp | AGATATCTCAATTTTTGTTGTTTTCCAGAAGCACGATaGTCAGCTAAAGTCCAGCATTGCCATATATTTGAT | + |
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Preference number: 6 (lower is better) Translates to: RYLNFCCFPEAR*SAKVQHCHIFD Trigger: ATCAAATATATGGCAATGCTGGACTTTAGCTGATCATCGTGCTTCTGGAAAACAACAAAAATTGAGATATCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 15 transcripts: ENST00000420901.5 ENST00000435253.5 ENST00000595309.6 ENST00000597635.6 ENST00000600656.6 ENST00000610126.2 ENST00000623043.2 ENST00000624898.4 ENST00000652819.1 ENST00000654698.1 ENST00000657035.1 ENST00000659994.1 ENST00000661746.1 ENST00000669135.1 ENST00000669362.1 |
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