Pregenerated sensors for LINC01675 (Homo sapiens)

Ensembl gene IDs: ENSG00000234142

Ensembl transcript IDs: ENST00000426519.2, ENST00000662326.1

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AATCCAGTCCTCTGGTTTCAGAAGGAGGTAGAAGGAGCTGGCATGTaGCACCCATATTTGTCCTTTGGTTCTCAGATAAAGATGTGCAGT	+
Preference number: 5 (lower is better) Translates to: NPVLWFQKEVEGAGM*HPYLSFGSQIKMCS Trigger: ACTGCACATCTTTATCTGAGAACCAAAGGACAAATATGGGTGTCACATGCCAGCTCCTTCTACCTCCTTCTGAAACCAGAGGACTGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426519.2 ENST00000662326.1
CDS CCA 90 bp	TGGTTCCAATCCAGTCCTCTGGTTTCAGAAGGAGGTAGAAGGAGCTaGCATGTGACACCCATATTTGTCCTTTGGTTCTCAGATAAAGAT	+
Preference number: 5 (lower is better) Translates to: WFQSSPLVSEGGRRS*HVTPIFVLWFSDKD Trigger: ATCTTTATCTGAGAACCAAAGGACAAATATGGGTGTCACATGCCAGCTCCTTCTACCTCCTTCTGAAACCAGAGGACTGGATTGGAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426519.2 ENST00000662326.1
CDS TCA 90 bp	CAGCATTTGATGACTCTGTGGCATAATCCCCAAAACAACAACTGTTaGACATGTATGTGTCCGTACATTTATCCATCTCTCATGTGTCAG	+
Preference number: 5 (lower is better) Translates to: QHLMTLWHNPQNNNC*TCMCPYIYPSLMCQ Trigger: CTGACACATGAGAGATGGATAAATGTACGGACACATACATGTTCAACAGTTGTTGTTTTGGGGATTATGCCACAGAGTCATCAAATGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662326.1
CDS TCA 90 bp	AGGAAGGTCGACTTGGATTATACAAGTTTGTGCCCCAAAGACAGATaGATTGTTCTTGCTGAGATTAAATTAGCAGTGTTTCATCCTCAT	+
Preference number: 5 (lower is better) Translates to: RKVDLDYTSLCPKDR*IVLAEIKLAVFHPH Trigger: ATGAGGATGAAACACTGCTAATTTAATCTCAGCAAGAACAATTCATCTGTCTTTGGGGCACAAACTTGTATAATCCAAGTCGACCTTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426519.2
CDS CCA 72 bp	TCCCAATGGAAGGTCTTTTCTCGATCGAAGGGTTCCTaGTCTCACGGGCTTCCAGGAATGAAGCCGTGGGCC	+
Preference number: 6 (lower is better) Translates to: SQWKVFSRSKGS*SHGLPGMKPWA Trigger: GGCCCACGGCTTCATTCCTGGAAGCCCGTGAGACCAGGAACCCTTCGATCGAGAAAAGACCTTCCATTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426519.2 ENST00000662326.1
CDS TCA 72 bp	TGGATAGAGGCTCCAGGAAGGTCGACTTGGATTCTGTaGGATGAGAAGCCACTGGGAGGCTTTGAGCAGATG	+
Preference number: 6 (lower is better) Translates to: WIEAPGRSTWIL*DEKPLGGFEQM Trigger: CATCTGCTCAAAGCCTCCCAGTGGCTTCTCATCTCACAGAATCCAAGTCGACCTTCCTGGAGCCTCTATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662326.1
CDS CCA 72 bp	TCCAGTCCTCTGGTTTCAGAAGGAGGTAGAAGGAGCTaGCATGTGACACCCATATTTGTCCTTTGGTTCTCA	+
Preference number: 6 (lower is better) Translates to: SSPLVSEGGRRS*HVTPIFVLWFS Trigger: TGAGAACCAAAGGACAAATATGGGTGTCACATGCCAGCTCCTTCTACCTCCTTCTGAAACCAGAGGACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426519.2 ENST00000662326.1
CDS GCA 72 bp	AAGATGTGCAGTATGAGGAAGCATCCTGGTTTCTCTTaGACTGGCCAATGGAACATTGTGGTGAGGCATCAT	+
Preference number: 6 (lower is better) Translates to: KMCSMRKHPGFS*TGQWNIVVRHH Trigger: ATGATGCCTCACCACAATGTTCCATTGGCCAGTGCAAGAGAAACCAGGATGCTTCCTCATACTGCACATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426519.2 ENST00000662326.1
CDS CAA 72 bp	AAAGATGTGCAGTATGAGGAAGCATCCTGGTTTCTCTaGCACTGGCCAATGGAACATTGTGGTGAGGCATCA	+
Preference number: 6 (lower is better) Translates to: KDVQYEEASWFL*HWPMEHCGEAS Trigger: TGATGCCTCACCACAATGTTCCATTGGCCAGTGCAAGAGAAACCAGGATGCTTCCTCATACTGCACATCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426519.2 ENST00000662326.1
CDS TCA 72 bp	AATTCCCTTTTCGGAGCCATCTCTTTCTGGATTAAATaGGTTAGTGCAGATAGAATACTTAGATTGGTGGCT	+
Preference number: 6 (lower is better) Translates to: NSLFGAISFWIK*VSADRILRLVA Trigger: AGCCACCAATCTAAGTATTCTATCTGCACTAACTCATTTAATCCAGAAAGAGATGGCTCCGAAAAGGGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662326.1
CDS CCA 72 bp	CCATTAACAGTCATTATCCTCATTTCTCTACACTCATaGAACCTTAAATTTGGAAAGGCTATGCCATATCTC	+
Preference number: 6 (lower is better) Translates to: PLTVIILISLHS*NLKFGKAMPYL Trigger: GAGATATGGCATAGCCTTTCCAAATTTAAGGTTCCATGAGTGTAGAGAAATGAGGATAATGACTGTTAATGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662326.1
CDS TCA 72 bp	GACTTGGATTATACAAGTTTGTGCCCCAAAGACAGATaGATTGTTCTTGCTGAGATTAAATTAGCAGTGTTT	+
Preference number: 6 (lower is better) Translates to: DLDYTSLCPKDR*IVLAEIKLAVF Trigger: AAACACTGCTAATTTAATCTCAGCAAGAACAATTCATCTGTCTTTGGGGCACAAACTTGTATAATCCAAGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426519.2
CDS CCA 72 bp	GGTCACAATATGATGTTTCAATACACTCATAAATTGTaGAATGATCAAATCAGGCGAATAAGTGTGTCTATC	+
Preference number: 6 (lower is better) Translates to: GHNMMFQYTHKL*NDQIRRISVSI Trigger: GATAGACACACTTATTCGCCTGATTTGATCATTCCACAATTTATGAGTGTATTGAAACATCATATTGTGACC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662326.1
CDS CAA 72 bp	TTATCCTCATTTCTCTACACTCATGGAACCTTAAATTaGGAAAGGCTATGCCATATCTCTCTAGAAATTCAT	+
Preference number: 6 (lower is better) Translates to: LSSFLYTHGTLN*ERLCHISLEIH Trigger: ATGAATTTCTAGAGAGATATGGCATAGCCTTTCCAAATTTAAGGTTCCATGAGTGTAGAGAAATGAGGATAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662326.1
CDS CAA 72 bp	TTGGGTCACAATATGATGTTTCAATACACTCATAAATaGTGGAATGATCAAATCAGGCGAATAAGTGTGTCT	+
Preference number: 6 (lower is better) Translates to: LGHNMMFQYTHK*WNDQIRRISVS Trigger: AGACACACTTATTCGCCTGATTTGATCATTCCACAATTTATGAGTGTATTGAAACATCATATTGTGACCCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662326.1